Rroxscaffold_4G00292370

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000153
Physical Location & Seq
Reverse (-)
12691205 .. 12696322
5118 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00292370.1

Sequence Viewer

Length: 1266 bp
ATGGCACAAGCACCGAGTCTTCTCACCCTCGAACTTCATGACCACCACTTCTCACCGGAATATGGTCTCATTCCCGCTTCCACCGCCGGGGACTGCGCGAAGGTAGCTCGGAGGAGGCATCTCATGAGTTTTCCGGGTGCTTTGTTTCTCCCAAGTTTTTATCCAAGTTGCTTATTGAGCGGGGAGAGTACCTGCAGTGCCTATATGTTTCCGGTATCCTGCGAGGACCACCGCGGGTTGGGCCGGAATGGGTCGGCTTTGAGGATGACATTTGCCTCCTCCATGTGGTGCGAAGATGGATTCCTCGAAACTCACACGTTCATCCGCTCTTGGGGAGAATTTACTCCTTCTCCGGAAGATTTTCCCTATGAGAATGTGCAGAGAAGTCTTCCCATTGGCAATTATGCTAGCAACCGAGTTAAGAGGCAATTTGGCATCGACCGGGATGTGCCATCGCATCTATCTTACGGTGGACATCTTGGGGATTGCATCATAGATTTCACTCGGATAGATGGTATTTCCTGCGAGGGTATGCTCTCCGATAGTCTCGGGAAGACAGATCGTGTTGGCTCTCCCATATTAACATTCTTGAGATTTTGGGAGTTGCGGCGGGGTGTCATGTCTAGGCTTAACCTTACTTACATTGAGGTACACTCGAATGGCATAGAATGTGTGGTTGGTCATCTTAAAGGTGGGGATGATTTAGAGGTGGACTTGACAAGAACAGAGGAGGGTGACAAGTGTGCAACAAAAGGCAAAGTCGGGCCTTCCGAGAATAGAGAAGAAAGTAAAAAAAGAAGAGTGATACCGCCGTCGAGTTTGGCTGATGGAAAAGGGAAGAAAAAGAAAGCCGCTTCTAGCTCGAGACCGAGCGAAGCTACTAAGCAAAAGGCGGAATCCCTTGGAGATAAGGATGATCGTAGGTTGAGTTGTTGCCTCGCAGAGAGCCTCATGCTGCGTGTCTCGATGGAGAATCACGAGCATAATGTGGCCGGTGCTAGTGCTCTAATGAAGGAATCTGTCGTAAATGTCCGTCCTTGTGCAGATAATCGTAACAAGGGTGGATCATTTTTGTTGACAGTTGGAGGGACATCATTTGAGCCCCATCTCCCCGAGACAAGACCGGGGGACGAAGGCGTTACCGCTGCAATCTTGGTGAGGCGTTCGAAGCTTTTGGTTAGCAAAGAGGGAATGAAGTTTAGCTTGTTGAAATTTGGTTGGAGATTTTCTGAAGCTAAGAACATTACTGGAGTGCTTGGGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

421

Amino Acids

46.27

Weight (kDa)

7.95

Isoelectric Point (pI)

58.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 200
AccBSI CCGCTC 2 cut(s) 180, 327
AccII CGCG 2 cut(s) 98, 234
AccIII TCCGGA 1 cut(s) 352
AclWI GGATC 1 cut(s) 1072
AcoI YGGCCR 1 cut(s) 990
AcsI RAATTY 2 cut(s) 338, 1211
AcuI CTGAAG 1 cut(s) 1251
AfaI GTAC 2 cut(s) 190, 651
AfiI CCNNNNNNNGG 5 cut(s) 62, 87, 238, 285, 331
AflIII ACRYGT 1 cut(s) 315
AgsI TTSAA 1 cut(s) 1210
AjuI GAANNNNNNNTTGG 2 cut(s) 660, 692
AluBI AGCT 6 cut(s) 107, 861, 878, 1171, 1203, 1235
AluI AGCT 6 cut(s) 107, 861, 878, 1171, 1203, 1235
Alw21I GWGCWC 1 cut(s) 1006
Alw26I GTCTC 5 cut(s) 71, 551, 859, 967, 1109
AlwI GGATC 1 cut(s) 1072
Ama87I CYCGRG 3 cut(s) 548, 862, 1112
Aor13HI TCCGGA 1 cut(s) 352
AoxI GGCC 3 cut(s) 241, 764, 990
ApeKI GCWGC 2 cut(s) 955, 1145
ApoI RAATTY 2 cut(s) 338, 1211
Asp700I GAANNNNTTC 1 cut(s) 360
AspLEI GCGC 1 cut(s) 98
AspS9I GGNCC 3 cut(s) 226, 241, 764
AsuC2I CCSGG 4 cut(s) 88, 135, 443, 1125
AsuHPI GGTGA 4 cut(s) 16, 45, 746, 1168
AsuII TTCGAA 1 cut(s) 1166
AsuNHI GCTAGC 1 cut(s) 407
AvaI CYCGRG 3 cut(s) 548, 862, 1112
AvaII GGWCC 1 cut(s) 226
BaeI ACNNNNGTAYC 2 cut(s) 797, 830
BanII GRGCYC 1 cut(s) 1104
BauI CACGAG 1 cut(s) 977
BbsI GAAGAC 3 cut(s) 11, 380, 560
Bbv12I GWGCWC 1 cut(s) 1006
BbvI GCAGC 2 cut(s) 942, 1132
BccI CCATC 6 cut(s) 290, 460, 506, 821, 961, 1113
BceAI ACGGC 1 cut(s) 796
BciVI GTATCC 1 cut(s) 226
BcnI CCSGG 4 cut(s) 88, 135, 443, 1125
BcoDI GTCTC 5 cut(s) 71, 551, 859, 967, 1109
BfaI CTAG 4 cut(s) 408, 624, 858, 999
BfmI CTRYAG 1 cut(s) 193
BfuAI ACCTGC 1 cut(s) 200
BfuI GTATCC 1 cut(s) 226
BisI GCNGC 4 cut(s) 608, 852, 956, 1146
BlsI GCNGC 4 cut(s) 609, 853, 957, 1147
Bme1390I CCNGG 4 cut(s) 88, 135, 443, 1125
Bme18I GGWCC 1 cut(s) 226
BmeT110I CYCGRG 3 cut(s) 548, 862, 1112
BmgT120I GGNCC 3 cut(s) 226, 241, 764
BmrFI CCNGG 4 cut(s) 88, 135, 443, 1125
BmsI GCATC 4 cut(s) 127, 444, 466, 498
BmtI GCTAGC 1 cut(s) 411
BpiI GAAGAC 3 cut(s) 11, 380, 560
BplI GAGNNNNNCTC 2 cut(s) 638, 670
Bpu14I TTCGAA 1 cut(s) 1166
BpuEI CTTGAG 1 cut(s) 610
BpuMI CCSGG 4 cut(s) 88, 135, 443, 1125
BsaI GGTCTC 2 cut(s) 71, 859
BsaJI CCNNGG 4 cut(s) 87, 232, 901, 1124
BsaWI WCCGGW 3 cut(s) 55, 211, 352
BsaXI ACNNNNNCTCC 2 cut(s) 334, 364
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 87, 238, 285, 331
Bse118I RCCGGY 1 cut(s) 992
Bse1I ACTGG 1 cut(s) 1252
BseAI TCCGGA 1 cut(s) 352
BseDI CCNNGG 4 cut(s) 87, 232, 901, 1124
BseGI GGATG 5 cut(s) 270, 321, 451, 703, 919
BseLI CCNNNNNNNGG 5 cut(s) 62, 87, 238, 285, 331
BseNI ACTGG 1 cut(s) 1252
BseRI GAGGAG 3 cut(s) 127, 268, 743
BseXI GCAGC 2 cut(s) 942, 1132
BsgI GTGCAG 2 cut(s) 398, 1062
Bsh1236I CGCG 2 cut(s) 98, 234
Bsh1285I CGRYCG 1 cut(s) 442
BshFI GGCC 3 cut(s) 243, 766, 992
BsiEI CGRYCG 1 cut(s) 442
BsiHKAI GWGCWC 1 cut(s) 1006
BsiHKCI CYCGRG 3 cut(s) 548, 862, 1112
BsiSI CCGG 9 cut(s) 56, 87, 134, 212, 244, 353, 442, 993, 1124
BslFI GGGAC 3 cut(s) 104, 1102, 1142
BslI CCNNNNNNNGG 5 cut(s) 62, 87, 238, 285, 331
BsmAI GTCTC 5 cut(s) 71, 551, 859, 967, 1109
BsmFI GGGAC 3 cut(s) 104, 1102, 1142
BsnI GGCC 3 cut(s) 243, 766, 992
Bso31I GGTCTC 2 cut(s) 71, 859
BsoBI CYCGRG 3 cut(s) 548, 862, 1112
Bsp119I TTCGAA 1 cut(s) 1166
Bsp1286I GDGCHC 2 cut(s) 1006, 1104
Bsp13I TCCGGA 1 cut(s) 352
Bsp143I GATC 3 cut(s) 559, 916, 1064
BspANI GGCC 3 cut(s) 243, 766, 992
BspEI TCCGGA 1 cut(s) 352
BspFNI CGCG 2 cut(s) 98, 234
BspHI TCATGA 2 cut(s) 37, 123
BspMAI CTGCAG 1 cut(s) 197
BspMI ACCTGC 1 cut(s) 200
BspOI GCTAGC 1 cut(s) 411
BspPI GGATC 1 cut(s) 1072
BspT104I TTCGAA 1 cut(s) 1166
BspTNI GGTCTC 2 cut(s) 71, 859
BsrBI CCGCTC 2 cut(s) 180, 327
BsrFI RCCGGY 1 cut(s) 992
BsrI ACTGG 1 cut(s) 1252
BssAI RCCGGY 1 cut(s) 992
BssECI CCNNGG 4 cut(s) 87, 232, 901, 1124
BssMI GATC 3 cut(s) 559, 916, 1064
BssSI CACGAG 1 cut(s) 977
BssT1I CCWWGG 1 cut(s) 901
Bst2BI CACGAG 1 cut(s) 977
Bst4CI ACNGT 2 cut(s) 470, 1081
Bst6I CTCTTC 1 cut(s) 793
BstBI TTCGAA 1 cut(s) 1166
BstC8I GCNNGC 1 cut(s) 409
BstDEI CTNAG 2 cut(s) 882, 1236
BstDSI CCRYGG 1 cut(s) 232
BstF5I GGATG 5 cut(s) 270, 321, 451, 703, 919
BstFNI CGCG 2 cut(s) 98, 234
BstHHI GCGC 1 cut(s) 98
BstKTI GATC 3 cut(s) 562, 919, 1067
BstMAI GTCTC 5 cut(s) 71, 551, 859, 967, 1109
BstMBI GATC 3 cut(s) 559, 916, 1064
BstMCI CGRYCG 1 cut(s) 442
BstMWI GCNNNNNNNGC 5 cut(s) 83, 104, 177, 240, 1168
BstSCI CCNGG 4 cut(s) 86, 133, 441, 1123
BstSFI CTRYAG 1 cut(s) 193
BstUI CGCG 2 cut(s) 98, 234
BstV1I GCAGC 2 cut(s) 942, 1132
BstV2I GAAGAC 3 cut(s) 11, 380, 560
BsuI GTATCC 1 cut(s) 226
BsuRI GGCC 3 cut(s) 243, 766, 992
BtgI CCRYGG 1 cut(s) 232
BtgZI GCGATG 1 cut(s) 438
BtsCI GGATG 5 cut(s) 270, 321, 451, 703, 919
BtsI GCAGTG 1 cut(s) 202
BtsIMutI CAGTG 1 cut(s) 202
BveI ACCTGC 1 cut(s) 200
Cac8I GCNNGC 1 cut(s) 409
CciI TCATGA 2 cut(s) 37, 123
CfoI GCGC 1 cut(s) 98
Cfr10I RCCGGY 1 cut(s) 992
Cfr13I GGNCC 3 cut(s) 226, 241, 764
Cfr42I CCGCGG 1 cut(s) 235
Csp6I GTAC 2 cut(s) 189, 650
CviAII CATG 5 cut(s) 38, 124, 283, 619, 952
CviQI GTAC 2 cut(s) 189, 650
DdeI CTNAG 2 cut(s) 882, 1236
DpnI GATC 3 cut(s) 561, 918, 1066
DpnII GATC 3 cut(s) 559, 916, 1064
EaeI YGGCCR 1 cut(s) 990
Eam1104I CTCTTC 1 cut(s) 793
EarI CTCTTC 1 cut(s) 793
EciI GGCGGA 1 cut(s) 908
Eco130I CCWWGG 1 cut(s) 901
Eco24I GRGCYC 1 cut(s) 1104
Eco31I GGTCTC 2 cut(s) 71, 859
Eco47I GGWCC 1 cut(s) 226
Eco57I CTGAAG 1 cut(s) 1251
Eco88I CYCGRG 3 cut(s) 548, 862, 1112
EcoT14I CCWWGG 1 cut(s) 901
EcoT38I GRGCYC 1 cut(s) 1104
ErhI CCWWGG 1 cut(s) 901
FaeI CATG 5 cut(s) 41, 127, 286, 622, 955
FalI AAGNNNNNCTT 2 cut(s) 1187, 1219
FaqI GGGAC 3 cut(s) 104, 1102, 1142
FatI CATG 5 cut(s) 37, 123, 282, 618, 951
FauI CCCGC 4 cut(s) 82, 173, 227, 603
Fnu4HI GCNGC 4 cut(s) 608, 852, 956, 1146
FokI GGATG 5 cut(s) 277, 308, 458, 710, 926
FriOI GRGCYC 1 cut(s) 1104
Fsp4HI GCNGC 4 cut(s) 608, 852, 956, 1146
FspBI CTAG 4 cut(s) 408, 624, 858, 999
GlaI GCGC 1 cut(s) 97
GluI GCNGC 4 cut(s) 608, 852, 956, 1146
HaeIII GGCC 3 cut(s) 243, 766, 992
HapII CCGG 9 cut(s) 56, 87, 134, 212, 244, 353, 442, 993, 1124
HhaI GCGC 1 cut(s) 98
Hin1II CATG 5 cut(s) 41, 127, 286, 622, 955
Hin6I GCGC 1 cut(s) 96
HinP1I GCGC 1 cut(s) 96
HincII GTYRAC 1 cut(s) 1077
HindII GTYRAC 1 cut(s) 1077
HindIII AAGCTT 1 cut(s) 1169
HinfI GANTC 5 cut(s) 16, 300, 896, 973, 1016
HpaII CCGG 9 cut(s) 56, 87, 134, 212, 244, 353, 442, 993, 1124
HphI GGTGA 4 cut(s) 16, 45, 746, 1168
Hpy166II GTNNAC 4 cut(s) 473, 652, 712, 1077
Hpy188I TCNGA 5 cut(s) 111, 507, 541, 772, 1231
Hpy188III TCNNGA 8 cut(s) 38, 124, 353, 550, 589, 864, 964, 977
Hpy8I GTNNAC 4 cut(s) 473, 652, 712, 1077
Hpy99I CGWCG 1 cut(s) 817
HpyAV CCTTC 5 cut(s) 94, 357, 777, 1006, 1127
HpyCH4III ACNGT 2 cut(s) 470, 1081
HpyCH4IV ACGT 1 cut(s) 317
HpyCH4V TGCA 6 cut(s) 195, 379, 489, 746, 1043, 1148
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 104, 177, 240, 1168
HpyF3I CTNAG 2 cut(s) 882, 1236
HpySE526I ACGT 1 cut(s) 317
Hsp92II CATG 5 cut(s) 41, 127, 286, 622, 955
HspAI GCGC 1 cut(s) 96
Kpn2I TCCGGA 1 cut(s) 352
KspI CCGCGG 1 cut(s) 235
Kzo9I GATC 3 cut(s) 559, 916, 1064
Lsp1109I GCAGC 2 cut(s) 942, 1132
LweI GCATC 4 cut(s) 127, 444, 466, 498
MaeI CTAG 4 cut(s) 408, 624, 858, 999
MaeII ACGT 1 cut(s) 317
MaeIII GTNAC 3 cut(s) 734, 1052, 1138
MalI GATC 3 cut(s) 561, 918, 1066
MbiI CCGCTC 2 cut(s) 180, 327
MboI GATC 3 cut(s) 559, 916, 1064
MboII GAAGA 8 cut(s) 11, 305, 368, 380, 565, 794, 810, 850
MhlI GDGCHC 2 cut(s) 1006, 1104
MluCI AATT 4 cut(s) 338, 400, 428, 1211
MlyI GAGTC 1 cut(s) 25
MmeI TCCRAC 2 cut(s) 1063, 1199
MroI TCCGGA 1 cut(s) 352
MroXI GAANNNNTTC 1 cut(s) 360
MseI TTAA 4 cut(s) 420, 581, 630, 687
MslI CAYNNNNRTG 1 cut(s) 657
MspA1I CMGCKG 2 cut(s) 234, 1145
MspI CCGG 9 cut(s) 56, 87, 134, 212, 244, 353, 442, 993, 1124
MspR9I CCNGG 4 cut(s) 88, 135, 443, 1125
MvnI CGCG 2 cut(s) 98, 234
MwoI GCNNNNNNNGC 5 cut(s) 83, 104, 177, 240, 1168
NciI CCSGG 4 cut(s) 88, 135, 443, 1125
NdeII GATC 3 cut(s) 559, 916, 1064
NheI GCTAGC 1 cut(s) 407
NlaIII CATG 5 cut(s) 41, 127, 286, 622, 955
NmuCI GTSAC 1 cut(s) 734
NspV TTCGAA 1 cut(s) 1166
PaeR7I CTCGAG 1 cut(s) 862
PagI TCATGA 2 cut(s) 37, 123
PcsI WCGNNNNNNNCGW 1 cut(s) 768
PdmI GAANNNNTTC 1 cut(s) 360
PfeI GAWTC 4 cut(s) 300, 896, 973, 1016
PkrI GCNGC 4 cut(s) 609, 853, 957, 1147
PleI GAGTC 1 cut(s) 24
PpsI GAGTC 1 cut(s) 24
PspPI GGNCC 3 cut(s) 226, 241, 764
PstI CTGCAG 1 cut(s) 197
RsaI GTAC 2 cut(s) 190, 651
RsaNI GTAC 2 cut(s) 189, 650
RseI CAYNNNNRTG 1 cut(s) 657
SacII CCGCGG 1 cut(s) 235
SaqAI TTAA 4 cut(s) 420, 581, 630, 687
SatI GCNGC 4 cut(s) 608, 852, 956, 1146
Sau3AI GATC 3 cut(s) 559, 916, 1064
Sau96I GGNCC 3 cut(s) 226, 241, 764
SchI GAGTC 1 cut(s) 25
ScrFI CCNGG 4 cut(s) 88, 135, 443, 1125
SduI GDGCHC 2 cut(s) 1006, 1104
SfaNI GCATC 4 cut(s) 127, 444, 466, 498
SfcI CTRYAG 1 cut(s) 193
Sfr274I CTCGAG 1 cut(s) 862
Sfr303I CCGCGG 1 cut(s) 235
SfuI TTCGAA 1 cut(s) 1166
SgrBI CCGCGG 1 cut(s) 235
SinI GGWCC 1 cut(s) 226
SlaI CTCGAG 1 cut(s) 862
SmiMI CAYNNNNRTG 1 cut(s) 657
SmlI CTYRAG 2 cut(s) 589, 862
SmoI CTYRAG 2 cut(s) 589, 862
Sse9I AATT 4 cut(s) 338, 400, 428, 1211
SspMI CTAG 4 cut(s) 408, 624, 858, 999
StyD4I CCNGG 4 cut(s) 86, 133, 441, 1123
StyI CCWWGG 1 cut(s) 901
TaaI ACNGT 2 cut(s) 470, 1081
TaiI ACGT 1 cut(s) 320
TaqI TCGA 8 cut(s) 30, 306, 438, 656, 815, 863, 965, 1166
TaqII GACCGA 1 cut(s) 883
TasI AATT 4 cut(s) 338, 400, 428, 1211
TauI GCSGC 2 cut(s) 610, 854
TfiI GAWTC 4 cut(s) 300, 896, 973, 1016
Tru1I TTAA 4 cut(s) 420, 581, 630, 687
Tru9I TTAA 4 cut(s) 420, 581, 630, 687
TscAI CASTG 1 cut(s) 202
TseFI GTSAC 1 cut(s) 734
TseI GCWGC 2 cut(s) 955, 1145
Tsp45I GTSAC 1 cut(s) 734
TspDTI ATGAA 4 cut(s) 26, 310, 1025, 1208
TspGWI ACGGA 1 cut(s) 1022
TspRI CASTG 1 cut(s) 202
VpaK11BI GGWCC 1 cut(s) 226
XapI RAATTY 2 cut(s) 338, 1211
XhoI CTCGAG 1 cut(s) 862
XmnI GAANNNNTTC 1 cut(s) 360
XspI CTAG 4 cut(s) 408, 624, 858, 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.