Rh5DG447800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000153
Physical Location & Seq
Reverse (-)
71424599 .. 71433605
9007 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG447800.1

Sequence Viewer

Length: 1380 bp
ATGGCACAAGCATCTGAGTCTTCTCAACCTACTGAACTTCATGACCACCACTTCTCACTGGAAGATGGTCTCATTCCCGCTTCCACCGCGGGGGACTGTGAAGGTAGCTCAGAGGAGGCATCTCATGAGTTTTCTGGCTTTGAGGCACAACAGGAAAAGCTTGAAGAGGCCCTTATTGGAGCTGGAGTGAAGATTTCACTGTTTATTTCCGGCTTTTGTGAGGTTTACAAAGATGACATTTTCCTTCGCCATGTGGTGCGAAGATGGAGGTTTATTCAGACTGGTGGGACTAGTGTGTTAGCCAATAGTGAGAACAAGATACTACTCCGCAGTAGTACTGTCATGGGTGTCGTGTCTAGACTTAACCTTCCCTATACTGAGGTATACTCGAATAGCGTGAAGCGTGTGGTTGGTCATCTCAAGGGTGGCAAAGGTGGAGATGATTCCGAAGTAGGGTTGCCAGCTGCTAGGATGGAGAAGGGTGGCAAGAGTGCAACCAAGGATAAAGTCAGGGCTTCCGAGGATAGAGGAGAAAGTAAAAGGAAGGTTTGTCGCTTCAAACCTAAGGTAGCAAAGGATTGCATCCCTCTTCCAATAGTCAAGAGTGCCTTTGGTGTTAAAGTGATACTGCCATCGAATTTGGCTGGTGAGAAAGGGAAGAAGAGGAAAGCTGCTTCTACCTTGAGACCGAGTAGGGTTACTAAGAGAAAGGCTATAGGTGATGCCTCACCCGCTGTCCTTAGGAGTAGTTCTCGGGTTGCCAACATGAGCTTTTCTAAGCGTAAATCATCGTCCAAGGGTGCTGTTTATGTTGATCTTAGTGACGCACCCAGCGATGTTGGGAAGGGTAGCCCCCTTAGTGATAACGTCAGTGCACATGAGGAGAATGAGTTTGATGCTTATGAGGGAAAGACCTGCGATGACGATAGCCAGGCGAAATCCCTTGGAGATGAGGATGATAAGGGTAATCCAACCGTAGCTTTAATGGAAGAGGATAGCTGTGTTGTTGCCTCGCAGGGGGCTCATGCTGCCATCTCGATGGAGAATCACGAGCATAATGTAGCTGGTGCTCGTGCTCTGATGAAGGAATCTGTTGCAAATGTCGGTCCTTGTGCAGATAACTGTAACAAGCAGGACGTTGGTATCAGTGATTCGGTGAAAGAATCTGCTGCAGGCGATAGTCTTTGCAAGGATGACCATAATGAGCGGGGTGGATCATTTTTGTTGACAGTTGGAGGGACATCATTTGAGCCCCATCTCCCTGAGACAGCACTGAGGGACGAAGGCGTTACTGCTGCAATCTTGTTTGTCGTGACCGTCGACCTCGAAGTAGCGGCGCTCCCCCTCTTCTCCGACTCTAAACTCCGTTATGGCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

459

Amino Acids

48.92

Weight (kDa)

5.91

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 923
AccBSI CCGCTC 1 cut(s) 1207
AccI GTMKAC 2 cut(s) 384, 1320
AccII CGCG 1 cut(s) 89
AciI CCGC 7 cut(s) 78, 87, 89, 328, 732, 1207, 1334
AclWI GGATC 1 cut(s) 1222
AcsI RAATTY 1 cut(s) 637
AfaI GTAC 1 cut(s) 337
AfiI CCNNNNNNNGG 3 cut(s) 90, 453, 1017
AgsI TTSAA 2 cut(s) 164, 559
AhlI ACTAGT 1 cut(s) 290
AjnI CCWGG 1 cut(s) 930
AluBI AGCT 9 cut(s) 108, 160, 182, 464, 671, 771, 980, 999, 1064
AluI AGCT 9 cut(s) 108, 160, 182, 464, 671, 771, 980, 999, 1064
Alw21I GWGCWC 3 cut(s) 877, 1072, 1078
Alw26I GTCTC 3 cut(s) 74, 679, 1259
Alw44I GTGCAC 1 cut(s) 873
AlwI GGATC 1 cut(s) 1222
Ama87I CYCGRG 1 cut(s) 753
AoxI GGCC 2 cut(s) 168, 1372
ApaLI GTGCAC 1 cut(s) 873
ApeKI GCWGC 5 cut(s) 464, 671, 1028, 1169, 1295
ApoI RAATTY 1 cut(s) 637
AspLEI GCGC 1 cut(s) 1339
AspS9I GGNCC 2 cut(s) 169, 1106
AsuHPI GGTGA 4 cut(s) 659, 720, 731, 1168
AvaI CYCGRG 1 cut(s) 753
AvaII GGWCC 1 cut(s) 1106
AxyI CCTNAGG 2 cut(s) 564, 740
BaeGI GKGCMC 1 cut(s) 877
BaeI ACNNNNGTAYC 2 cut(s) 1126, 1159
BanII GRGCYC 2 cut(s) 1024, 1254
BauI CACGAG 2 cut(s) 1049, 1071
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 3 cut(s) 877, 1072, 1078
BbvI GCAGC 5 cut(s) 451, 658, 1015, 1156, 1282
BccI CCATC 7 cut(s) 59, 258, 466, 640, 1033, 1040, 1263
BciT130I CCWGG 1 cut(s) 932
BcoDI GTCTC 3 cut(s) 74, 679, 1259
BcuI ACTAGT 1 cut(s) 290
BfaI CTAG 3 cut(s) 291, 357, 468
BfmI CTRYAG 2 cut(s) 714, 1170
BfoI RGCGCY 1 cut(s) 1340
BfuAI ACCTGC 1 cut(s) 923
BisI GCNGC 6 cut(s) 465, 672, 1029, 1170, 1296, 1335
BlsI GCNGC 6 cut(s) 466, 673, 1030, 1171, 1297, 1336
BmcAI AGTACT 1 cut(s) 337
Bme1390I CCNGG 1 cut(s) 932
Bme18I GGWCC 1 cut(s) 1106
BmeT110I CYCGRG 1 cut(s) 753
BmgT120I GGNCC 2 cut(s) 169, 1106
BmrFI CCNGG 1 cut(s) 932
BmsI GCATC 5 cut(s) 20, 128, 591, 712, 886
BpiI GAAGAC 1 cut(s) 12
BplI GAGNNNNNCTC 4 cut(s) 371, 403, 736, 768
BpmI CTGGAG 1 cut(s) 204
BpuEI CTTGAG 2 cut(s) 404, 703
BsaI GGTCTC 2 cut(s) 74, 679
BsaJI CCNNGG 5 cut(s) 87, 498, 519, 795, 943
BsaXI ACNNNNNCTCC 4 cut(s) 171, 201, 875, 905
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 453, 1017
Bse1I ACTGG 2 cut(s) 63, 286
Bse21I CCTNAGG 2 cut(s) 564, 740
BseBI CCWGG 1 cut(s) 932
BseDI CCNNGG 5 cut(s) 87, 498, 519, 795, 943
BseGI GGATG 4 cut(s) 477, 582, 961, 1198
BseLI CCNNNNNNNGG 3 cut(s) 90, 453, 1017
BseMII CTCAG 5 cut(s) 6, 123, 369, 1254, 1265
BseNI ACTGG 2 cut(s) 63, 286
BseRI GAGGAG 3 cut(s) 128, 543, 896
BseSI GKGCMC 1 cut(s) 877
BseXI GCAGC 5 cut(s) 451, 658, 1015, 1156, 1282
BseYI CCCAGC 1 cut(s) 830
BsgI GTGCAG 1 cut(s) 1134
Bsh1236I CGCG 1 cut(s) 89
BshFI GGCC 2 cut(s) 170, 1374
BsiHKAI GWGCWC 3 cut(s) 877, 1072, 1078
BsiHKCI CYCGRG 1 cut(s) 753
BsiSI CCGG 1 cut(s) 210
BslFI GGGAC 4 cut(s) 107, 301, 1252, 1292
BslI CCNNNNNNNGG 3 cut(s) 90, 453, 1017
BsmAI GTCTC 3 cut(s) 74, 679, 1259
BsmFI GGGAC 4 cut(s) 107, 301, 1252, 1292
BsnI GGCC 2 cut(s) 170, 1374
Bso31I GGTCTC 2 cut(s) 74, 679
BsoBI CYCGRG 1 cut(s) 753
Bsp1286I GDGCHC 5 cut(s) 877, 1024, 1072, 1078, 1254
Bsp143I GATC 2 cut(s) 814, 1214
BspACI CCGC 7 cut(s) 78, 87, 89, 328, 732, 1207, 1334
BspANI GGCC 2 cut(s) 170, 1374
BspCNI CTCAG 5 cut(s) 7, 122, 370, 1255, 1266
BspFNI CGCG 1 cut(s) 89
BspHI TCATGA 2 cut(s) 40, 124
BspMAI CTGCAG 1 cut(s) 1174
BspMI ACCTGC 1 cut(s) 923
BspPI GGATC 1 cut(s) 1222
BspTNI GGTCTC 2 cut(s) 74, 679
BsrBI CCGCTC 1 cut(s) 1207
BsrI ACTGG 2 cut(s) 63, 286
BssECI CCNNGG 5 cut(s) 87, 498, 519, 795, 943
BssMI GATC 2 cut(s) 814, 1214
BssNAI GTATAC 1 cut(s) 385
BssSI CACGAG 2 cut(s) 1049, 1071
BssT1I CCWWGG 3 cut(s) 498, 795, 943
Bst1107I GTATAC 1 cut(s) 385
Bst2BI CACGAG 2 cut(s) 1049, 1071
Bst2UI CCWGG 1 cut(s) 932
Bst4CI ACNGT 7 cut(s) 98, 201, 340, 976, 1124, 1231, 1318
Bst6I CTCTTC 5 cut(s) 159, 594, 656, 984, 1352
BstC8I GCNNGC 2 cut(s) 462, 1174
BstDSI CCRYGG 1 cut(s) 87
BstF5I GGATG 4 cut(s) 477, 582, 961, 1198
BstFNI CGCG 1 cut(s) 89
BstH2I RGCGCY 1 cut(s) 1340
BstHHI GCGC 1 cut(s) 1339
BstKTI GATC 2 cut(s) 817, 1217
BstMAI GTCTC 3 cut(s) 74, 679, 1259
BstMBI GATC 2 cut(s) 814, 1214
BstMWI GCNNNNNNNGC 3 cut(s) 86, 731, 1028
BstNI CCWGG 1 cut(s) 932
BstSCI CCNGG 1 cut(s) 930
BstSFI CTRYAG 2 cut(s) 714, 1170
BstSLI GKGCMC 1 cut(s) 877
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 5 cut(s) 451, 658, 1015, 1156, 1282
BstV2I GAAGAC 1 cut(s) 12
BstXI CCANNNNNNTGG 1 cut(s) 1039
BstZ17I GTATAC 1 cut(s) 385
Bsu36I CCTNAGG 2 cut(s) 564, 740
BsuRI GGCC 2 cut(s) 170, 1374
BtgI CCRYGG 1 cut(s) 87
BtgZI GCGATG 2 cut(s) 849, 933
BtsCI GGATG 4 cut(s) 477, 582, 961, 1198
BtsIMutI CAGTG 5 cut(s) 56, 197, 877, 1153, 1271
BveI ACCTGC 1 cut(s) 923
Cac8I GCNNGC 2 cut(s) 462, 1174
CciI TCATGA 2 cut(s) 40, 124
CfoI GCGC 1 cut(s) 1339
Cfr13I GGNCC 2 cut(s) 169, 1106
Cfr42I CCGCGG 1 cut(s) 90
CseI GACGC 1 cut(s) 833
Csp6I GTAC 1 cut(s) 336
CviAII CATG 7 cut(s) 41, 125, 251, 343, 766, 878, 1025
CviQI GTAC 1 cut(s) 336
DpnI GATC 2 cut(s) 816, 1216
DpnII GATC 2 cut(s) 814, 1214
Eam1104I CTCTTC 5 cut(s) 159, 594, 656, 984, 1352
EarI CTCTTC 5 cut(s) 159, 594, 656, 984, 1352
Eco130I CCWWGG 3 cut(s) 498, 795, 943
Eco24I GRGCYC 2 cut(s) 1024, 1254
Eco31I GGTCTC 2 cut(s) 74, 679
Eco47I GGWCC 1 cut(s) 1106
Eco81I CCTNAGG 2 cut(s) 564, 740
Eco88I CYCGRG 1 cut(s) 753
EcoO109I RGGNCCY 1 cut(s) 169
EcoRII CCWGG 1 cut(s) 930
EcoT14I CCWWGG 3 cut(s) 498, 795, 943
EcoT38I GRGCYC 2 cut(s) 1024, 1254
ErhI CCWWGG 3 cut(s) 498, 795, 943
FaeI CATG 7 cut(s) 44, 128, 254, 346, 769, 881, 1028
FalI AAGNNNNNCTT 4 cut(s) 156, 188, 593, 625
FaqI GGGAC 4 cut(s) 107, 301, 1252, 1292
FatI CATG 7 cut(s) 40, 124, 250, 342, 765, 877, 1024
FauI CCCGC 4 cut(s) 82, 85, 739, 1200
FblI GTMKAC 2 cut(s) 384, 1320
Fnu4HI GCNGC 6 cut(s) 465, 672, 1029, 1170, 1296, 1335
FokI GGATG 4 cut(s) 484, 569, 968, 1205
FriOI GRGCYC 2 cut(s) 1024, 1254
Fsp4HI GCNGC 6 cut(s) 465, 672, 1029, 1170, 1296, 1335
FspBI CTAG 3 cut(s) 291, 357, 468
GlaI GCGC 1 cut(s) 1338
GluI GCNGC 6 cut(s) 465, 672, 1029, 1170, 1296, 1335
GsaI CCCAGC 1 cut(s) 834
GsuI CTGGAG 1 cut(s) 204
HaeII RGCGCY 1 cut(s) 1340
HaeIII GGCC 2 cut(s) 170, 1374
HapII CCGG 1 cut(s) 210
HgaI GACGC 1 cut(s) 833
HhaI GCGC 1 cut(s) 1339
Hin1II CATG 7 cut(s) 44, 128, 254, 346, 769, 881, 1028
Hin6I GCGC 1 cut(s) 1337
HinP1I GCGC 1 cut(s) 1337
HincII GTYRAC 2 cut(s) 1227, 1321
HindII GTYRAC 2 cut(s) 1227, 1321
HindIII AAGCTT 1 cut(s) 158
HinfI GANTC 7 cut(s) 17, 443, 1045, 1088, 1151, 1163, 1355
HpaII CCGG 1 cut(s) 210
HphI GGTGA 4 cut(s) 659, 720, 731, 1168
Hpy166II GTNNAC 5 cut(s) 226, 385, 875, 1227, 1321
Hpy188I TCNGA 7 cut(s) 16, 112, 279, 448, 520, 1080, 1354
Hpy188III TCNNGA 7 cut(s) 41, 125, 357, 601, 1036, 1049, 1312
Hpy8I GTNNAC 5 cut(s) 226, 385, 875, 1227, 1321
Hpy99I CGWCG 1 cut(s) 1322
HpyAV CCTTC 8 cut(s) 95, 254, 377, 472, 538, 838, 1078, 1277
HpyCH4III ACNGT 7 cut(s) 98, 201, 340, 976, 1124, 1231, 1318
HpyCH4IV ACGT 2 cut(s) 867, 1137
HpyCH4V TGCA 8 cut(s) 494, 582, 875, 1097, 1115, 1172, 1188, 1298
HpyF10VI GCNNNNNNNGC 3 cut(s) 86, 731, 1028
HpySE526I ACGT 2 cut(s) 867, 1137
Hsp92II CATG 7 cut(s) 44, 128, 254, 346, 769, 881, 1028
HspAI GCGC 1 cut(s) 1337
KspI CCGCGG 1 cut(s) 90
Kzo9I GATC 2 cut(s) 814, 1214
LmnI GCTCC 2 cut(s) 179, 1344
Lsp1109I GCAGC 5 cut(s) 451, 658, 1015, 1156, 1282
LweI GCATC 5 cut(s) 20, 128, 591, 712, 886
MaeI CTAG 3 cut(s) 291, 357, 468
MaeII ACGT 2 cut(s) 867, 1137
MaeIII GTNAC 5 cut(s) 697, 821, 1124, 1288, 1312
MalI GATC 2 cut(s) 816, 1216
MbiI CCGCTC 1 cut(s) 1207
MboI GATC 2 cut(s) 814, 1214
MhlI GDGCHC 5 cut(s) 877, 1024, 1072, 1078, 1254
MluCI AATT 1 cut(s) 637
MlyI GAGTC 2 cut(s) 26, 1349
MmeI TCCRAC 3 cut(s) 995, 1213, 1377
MseI TTAA 3 cut(s) 363, 618, 983
MslI CAYNNNNRTG 1 cut(s) 1037
MspA1I CMGCKG 3 cut(s) 89, 464, 734
MspI CCGG 1 cut(s) 210
MspR9I CCNGG 1 cut(s) 932
MvaI CCWGG 1 cut(s) 932
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 3 cut(s) 86, 731, 1028
NdeII GATC 2 cut(s) 814, 1214
NlaIII CATG 7 cut(s) 44, 128, 254, 346, 769, 881, 1028
NmuCI GTSAC 2 cut(s) 821, 1312
PagI TCATGA 2 cut(s) 40, 124
PcsI WCGNNNNNNNCGW 2 cut(s) 831, 1317
PfeI GAWTC 5 cut(s) 443, 1045, 1088, 1151, 1163
PkrI GCNGC 6 cut(s) 466, 673, 1030, 1171, 1297, 1336
PleI GAGTC 2 cut(s) 25, 1349
PpsI GAGTC 2 cut(s) 25, 1349
Psp6I CCWGG 1 cut(s) 930
PspFI CCCAGC 1 cut(s) 830
PspGI CCWGG 1 cut(s) 930
PspPI GGNCC 2 cut(s) 169, 1106
PstI CTGCAG 1 cut(s) 1174
PvuII CAGCTG 1 cut(s) 464
RsaI GTAC 1 cut(s) 337
RsaNI GTAC 1 cut(s) 336
RseI CAYNNNNRTG 1 cut(s) 1037
SacII CCGCGG 1 cut(s) 90
SalI GTCGAC 1 cut(s) 1319
SaqAI TTAA 3 cut(s) 363, 618, 983
SatI GCNGC 6 cut(s) 465, 672, 1029, 1170, 1296, 1335
Sau3AI GATC 2 cut(s) 814, 1214
Sau96I GGNCC 2 cut(s) 169, 1106
ScaI AGTACT 1 cut(s) 337
SchI GAGTC 2 cut(s) 26, 1349
ScrFI CCNGG 1 cut(s) 932
SduI GDGCHC 5 cut(s) 877, 1024, 1072, 1078, 1254
SfaNI GCATC 5 cut(s) 20, 128, 591, 712, 886
SfcI CTRYAG 2 cut(s) 714, 1170
Sfr303I CCGCGG 1 cut(s) 90
SgrBI CCGCGG 1 cut(s) 90
SinI GGWCC 1 cut(s) 1106
SmiMI CAYNNNNRTG 1 cut(s) 1037
SmlI CTYRAG 2 cut(s) 419, 682
SmoI CTYRAG 2 cut(s) 419, 682
SpeI ACTAGT 1 cut(s) 290
Sse9I AATT 1 cut(s) 637
SsiI CCGC 7 cut(s) 78, 87, 89, 328, 732, 1207, 1334
SspMI CTAG 3 cut(s) 291, 357, 468
StyD4I CCNGG 1 cut(s) 930
StyI CCWWGG 3 cut(s) 498, 795, 943
TaaI ACNGT 7 cut(s) 98, 201, 340, 976, 1124, 1231, 1318
TaiI ACGT 2 cut(s) 870, 1140
TaqI TCGA 5 cut(s) 389, 635, 1037, 1320, 1326
TaqII GACCGA 2 cut(s) 703, 1094
TasI AATT 1 cut(s) 637
TatI WGTACW 1 cut(s) 335
TauI GCSGC 1 cut(s) 1337
TfiI GAWTC 5 cut(s) 443, 1045, 1088, 1151, 1163
Tru1I TTAA 3 cut(s) 363, 618, 983
Tru9I TTAA 3 cut(s) 363, 618, 983
TscAI CASTG 5 cut(s) 63, 204, 877, 1153, 1278
TseFI GTSAC 2 cut(s) 821, 1312
TseI GCWGC 5 cut(s) 464, 671, 1028, 1169, 1295
Tsp45I GTSAC 2 cut(s) 821, 1312
TspDTI ATGAA 2 cut(s) 29, 1097
TspGWI ACGGA 1 cut(s) 1355
TspRI CASTG 5 cut(s) 63, 204, 877, 1153, 1278
VneI GTGCAC 1 cut(s) 873
VpaK11BI GGWCC 1 cut(s) 1106
XapI RAATTY 1 cut(s) 637
XbaI TCTAGA 1 cut(s) 356
XmiI GTMKAC 2 cut(s) 384, 1320
XspI CTAG 3 cut(s) 291, 357, 468
ZrmI AGTACT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.