Rmu_sc0003032.1_g000006

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003032.1
OG0000153
Physical Location & Seq
Forward (+)
34888 .. 38721
3834 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003032.1_g000006.1.cds

Sequence Viewer

Length: 2850 bp
atgaccaccacttctcactggaagatggtctcattcatgcttccactgcgggggcttgtgaaggtagctcagaggaggaatctcatgagttttctgggtgctttgtctctcccaagttcatatccaggttgcttattgagcggggagagtaacctgcagtgcctatatgtttcggtatcctgcgaggacccctgcggatggagtcctgaaactcacacgttcatctgttcttggggggaatttactccttctctggaagatgtttgcaataatatgcgaatcccgatcgttggggatggtaatcccttcaagatagagctaaataaagcacagaagaagaagctgcagattctgaaaaggggtgcttatgattctaaagaagtgttccgtttttgctactgggtgagacatttttggggctcgacggacggaggcaagtttaagcatggtgcaggtttcgaatctggctgccgggtggaagccatgtttgcttattggctgagcaggttcattttcacagattttccctatgagaatgtgcagcagcgagtcttcccgttggccattatgctagcagcagtatttgtatgggagagattcgaaggtttggctgtggaacccgtaactcctgagtccctccaccaccttgagggaggtaaaagggacttcaatctagtaggattcccattgtgttgtagatggttcagaaggaaggccaagaagggtgcattcaggcctgttgttttggacgacatcgggaaattcaatttcagaccatatttcactgctcatggcttccagacatttcctttcttttatccagagggtaactcatcacccttcctagagccggttgagctgcttctaaccactagtgtgcagtccataatagcatgcggtgatttctttgaccccgtgatggagaagtattctcctcatagagttaagaggcaatttggcatcgaccaagatgtgccatcgcatctatcttacggtggagatcttggggattgcatcatgggtttcactcggacagatggtatttcctgcaggggtatgctctccgatagtctcgggaagaaaggttgtgttggatcccctacattaacattcttgagattttgggagttgcagcggtgcgagtttaggaggttttttcaaactggtgggactaggttgcgtccgaaatccactagtgagaacaagagactactccacagtagcactgtcatgggtgtcatgtctagacttaaccttccctatactgaggtatacttgaatggtataaagcgtgtggttggccacctcaagggtggtaaaagtggagatgatcttgaagtagagttgccagctgccagaatgaaaggtagcaagagtgtaacaaagggtaaagtcggggctcccgaggatggaggagaaagtaaaaggaaggtttgccgcttcaaacctaaggtggcaaaagatcgtatccctcctccagtagtcaagagtgcctctggtgttaaagtgatactgccattgagtttggcttgtgaaaaagggaagaagaggaaagctacttctaccctgagaccaagtggggttattaagaggaaggttgcagatgatgcctcacctgctgtccttaggcggagttctcgcgtggccaacatgaacttttataaatgtaaaccgtcgtccaagggtgatgtttatgttgatcttagtgatgggccaagcgccgacggggatggtagccccctgagtgatgaggagaatgagtctgatacttataagggaaagacctgcgatgatggtagccaggtagagtcttttgaagatgaggatggtcagggagctgatgttgctgtcttagtgggggattatgaacataatgttagtggaatacacgaccgaggcctactgcatgaatctgctgcaattgttggtccttgtgcagataattgtaataagtatgtgcgtagagttgacattggtattagtgatttggcgaaagaatttactgcgaacgatagtctttgtgaggatgatcataatgagtggggtggatcagatttgttagcggttggagggacatcgtttgagccccaactccctgagacagcatcgggggacaacgacgttactgcgacaatcttggtcagtagaggaactccactttgtgcttcctcttctcgctctcttgctcctaactcagataaatcaggaagtgtgtcgagggctaatttggagatgcggtttagaaagtttcttgcttgttttgacattgaggatagcttaagtattactattgacgacattgcgcgcccattgagtggtatcagatcttcatttgagggtgggaaagtcccctcggagttcgtggctccacttactaaatttgctgaaaggtacgatggaggtagtttctctagcttgtttgtaaatggaaagagtgcccgtcagaaacaaaaattggttgaggacttcggttatgtgttgtacagcatggagattgaagaagtgaaaaatgaggaaacttttttaatttggagggatgcatgccgtgacatcatagattgggggtttaaagtcggcttcatgcttatttatttgaagcaggctgctagggatttttttggttatatgctcagacccagtggatcagaaagaagttgtagggagatcattcaaatggaggaagctgtatccaagttgagggaaaagctttcgcatcttgaacaacaattaggaaaggcgcaagaagacttatgcaccaagcttggtgatgacattagcttagatagcaagtcctgcatattaagatcttcttgggttgctcagagctgtgcaactcatgtcatgtattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

949

Amino Acids

105.49

Weight (kDa)

7.97

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1662, 1773
AarI CACCTGC 1 cut(s) 1624
Acc36I ACCTGC 5 cut(s) 162, 443, 495, 1624, 1793
AccB7I CCANNNNNTGG 1 cut(s) 2315
AccBSI CCGCTC 1 cut(s) 141
AccI GTMKAC 1 cut(s) 1272
AccII CGCG 2 cut(s) 1641, 2305
AciI CCGC 9 cut(s) 49, 141, 195, 897, 1135, 1438, 1630, 2063, 2236
AclWI GGATC 4 cut(s) 1089, 1102, 2056, 2650
AcoI YGGCCR 3 cut(s) 561, 1300, 1644
AcsI RAATTY 4 cut(s) 239, 761, 1997, 2378
AdeI CACNNNGTG 1 cut(s) 2162
AfaI GTAC 2 cut(s) 2393, 2483
AflII CTTAAG 1 cut(s) 2278
AflIII ACRYGT 1 cut(s) 216
AhlI ACTAGT 2 cut(s) 872, 1193
AjnI CCWGG 2 cut(s) 124, 1800
AjuI GAANNNNNNNTTGG 2 cut(s) 2438, 2470
AleI CACNNNNGTG 1 cut(s) 875
Alw26I GTCTC 7 cut(s) 34, 111, 400, 1076, 1201, 1564, 2093
AlwI GGATC 4 cut(s) 1089, 1102, 2056, 2650
AlwNI CAGNNNCTG 1 cut(s) 352
Ama87I CYCGRG 2 cut(s) 1073, 1403
AoxI GGCC 7 cut(s) 561, 714, 734, 1300, 1644, 1712, 1897
ApoI RAATTY 4 cut(s) 239, 761, 1997, 2378
AspLEI GCGC 4 cut(s) 1721, 2305, 2307, 2740
AspS9I GGNCC 3 cut(s) 187, 1712, 1928
AsuC2I CCSGG 1 cut(s) 473
AsuHPI GGTGA 6 cut(s) 415, 828, 911, 1605, 1697, 2777
AsuII TTCGAA 2 cut(s) 459, 600
AsuNHI GCTAGC 1 cut(s) 571
AvaI CYCGRG 2 cut(s) 1073, 1403
AvaII GGWCC 2 cut(s) 187, 1928
AxyI CCTNAGG 2 cut(s) 1449, 1625
BaeGI GKGCMC 1 cut(s) 2440
BalI TGGCCA 3 cut(s) 563, 1302, 1646
BamHI GGATCC 1 cut(s) 1094
BanII GRGCYC 3 cut(s) 422, 1402, 2088
BarI GAAGNNNNNNTAC 2 cut(s) 2311, 2343
BbsI GAAGAC 2 cut(s) 544, 2751
BceAI ACGGC 1 cut(s) 2529
BcgI CGANNNNNNTGC 2 cut(s) 2108, 2142
BciT130I CCWGG 2 cut(s) 126, 1802
BciVI GTATCC 3 cut(s) 187, 1478, 2698
BclI TGATCA 1 cut(s) 2029
BcnI CCSGG 1 cut(s) 473
BcoDI GTCTC 7 cut(s) 34, 111, 400, 1076, 1201, 1564, 2093
BcuI ACTAGT 2 cut(s) 872, 1193
BfaI CTAG 9 cut(s) 572, 674, 845, 873, 1173, 1194, 1245, 2412, 2607
BfmI CTRYAG 3 cut(s) 155, 344, 1048
BfoI RGCGCY 1 cut(s) 1722
BfrI CTTAAG 1 cut(s) 2278
BfuAI ACCTGC 5 cut(s) 162, 443, 495, 1624, 1793
BfuI GTATCC 3 cut(s) 187, 1478, 2698
BglII AGATCT 3 cut(s) 1000, 2324, 2804
BlpI GCTNAGC 1 cut(s) 500
Bme1390I CCNGG 3 cut(s) 126, 473, 1802
Bme18I GGWCC 2 cut(s) 187, 1928
BmeT110I CYCGRG 2 cut(s) 1073, 1403
BmgT120I GGNCC 3 cut(s) 187, 1712, 1928
BmiI GGNNCC 5 cut(s) 189, 618, 1096, 1401, 2367
BmrFI CCNGG 3 cut(s) 126, 473, 1802
BmrI ACTGGG 2 cut(s) 409, 2631
BmsI GCATC 8 cut(s) 969, 991, 1023, 1597, 2114, 2223, 2527, 2722
BmtI GCTAGC 1 cut(s) 575
BmuI ACTGGG 2 cut(s) 409, 2631
BpiI GAAGAC 2 cut(s) 544, 2751
BplI GAGNNNNNCTC 2 cut(s) 815, 847
BpmI CTGGAG 1 cut(s) 1461
Bpu1102I GCTNAGC 1 cut(s) 500
Bpu14I TTCGAA 2 cut(s) 459, 600
BpuEI CTTGAG 3 cut(s) 668, 1135, 1292
BpuMI CCSGG 1 cut(s) 473
BsaBI GATNNNNATC 1 cut(s) 300
BsaI GGTCTC 2 cut(s) 34, 1564
BsaJI CCNNGG 4 cut(s) 1404, 1680, 1894, 2352
BsaXI ACNNNNNCTCC 6 cut(s) 1745, 1775, 1827, 1857, 2222, 2252
Bse118I RCCGGY 1 cut(s) 850
Bse1I ACTGG 5 cut(s) 23, 404, 1168, 1478, 2637
Bse21I CCTNAGG 2 cut(s) 1449, 1625
Bse3DI GCAATG 1 cut(s) 2298
Bse8I GATNNNNATC 1 cut(s) 300
BseBI CCWGG 2 cut(s) 126, 1802
BseDI CCNNGG 4 cut(s) 1404, 1680, 1894, 2352
BseGI GGATG 7 cut(s) 203, 301, 1414, 1735, 1831, 2032, 2542
BseJI GATNNNNATC 1 cut(s) 300
BseMI GCAATG 1 cut(s) 2298
BseNI ACTGG 5 cut(s) 23, 404, 1168, 1478, 2637
BsePI GCGCGC 1 cut(s) 2303
BseRI GAGGAG 5 cut(s) 88, 924, 1428, 1464, 1766
BseSI GKGCMC 1 cut(s) 2440
BsgI GTGCAG 4 cut(s) 471, 560, 899, 1956
Bsh1236I CGCG 2 cut(s) 1641, 2305
Bsh1285I CGRYCG 2 cut(s) 288, 1894
BshFI GGCC 7 cut(s) 563, 716, 736, 1302, 1646, 1714, 1899
BsiEI CGRYCG 2 cut(s) 288, 1894
BsiHKCI CYCGRG 2 cut(s) 1073, 1403
BsiSI CCGG 2 cut(s) 472, 851
BslFI GGGAC 6 cut(s) 619, 677, 1183, 2086, 2126, 2333
BsmAI GTCTC 7 cut(s) 34, 111, 400, 1076, 1201, 1564, 2093
BsmFI GGGAC 6 cut(s) 619, 677, 1183, 2086, 2126, 2333
BsmI GAATGC 1 cut(s) 728
BsnI GGCC 7 cut(s) 563, 716, 736, 1302, 1646, 1714, 1899
Bso31I GGTCTC 2 cut(s) 34, 1564
BsoBI CYCGRG 2 cut(s) 1073, 1403
Bsp119I TTCGAA 2 cut(s) 459, 600
Bsp1286I GDGCHC 4 cut(s) 422, 1402, 2088, 2440
Bsp1407I TGTACA 1 cut(s) 2481
Bsp1720I GCTNAGC 1 cut(s) 500
BspACI CCGC 9 cut(s) 49, 141, 195, 897, 1135, 1438, 1630, 2063, 2236
BspANI GGCC 7 cut(s) 563, 716, 736, 1302, 1646, 1714, 1899
BspFNI CGCG 2 cut(s) 1641, 2305
BspHI TCATGA 1 cut(s) 84
BspLI GGNNCC 5 cut(s) 189, 618, 1096, 1401, 2367
BspMAI CTGCAG 3 cut(s) 159, 348, 1052
BspMI ACCTGC 5 cut(s) 162, 443, 495, 1624, 1793
BspOI GCTAGC 1 cut(s) 575
BspPI GGATC 4 cut(s) 1089, 1102, 2056, 2650
BspT104I TTCGAA 2 cut(s) 459, 600
BspTI CTTAAG 1 cut(s) 2278
BspTNI GGTCTC 2 cut(s) 34, 1564
BsrBI CCGCTC 1 cut(s) 141
BsrDI GCAATG 1 cut(s) 2298
BsrFI RCCGGY 1 cut(s) 850
BsrGI TGTACA 1 cut(s) 2481
BsrI ACTGG 5 cut(s) 23, 404, 1168, 1478, 2637
BssAI RCCGGY 1 cut(s) 850
BssECI CCNNGG 4 cut(s) 1404, 1680, 1894, 2352
BssHII GCGCGC 1 cut(s) 2303
BssNAI GTATAC 1 cut(s) 1273
BssT1I CCWWGG 1 cut(s) 1680
Bst1107I GTATAC 1 cut(s) 1273
Bst2UI CCWGG 2 cut(s) 126, 1802
Bst4CI ACNGT 4 cut(s) 995, 1220, 1228, 1674
Bst6I CTCTTC 2 cut(s) 1541, 2176
BstAFI CTTAAG 1 cut(s) 2278
BstAPI GCANNNNNTGC 2 cut(s) 1607, 2793
BstAUI TGTACA 1 cut(s) 2481
BstBI TTCGAA 2 cut(s) 459, 600
BstC8I GCNNGC 6 cut(s) 573, 895, 1350, 2305, 2542, 2601
BstF5I GGATG 7 cut(s) 203, 301, 1414, 1735, 1831, 2032, 2542
BstFNI CGCG 2 cut(s) 1641, 2305
BstH2I RGCGCY 1 cut(s) 1722
BstHHI GCGC 4 cut(s) 1721, 2305, 2307, 2740
BstMAI GTCTC 7 cut(s) 34, 111, 400, 1076, 1201, 1564, 2093
BstMCI CGRYCG 2 cut(s) 288, 1894
BstMWI GCNNNNNNNGC 9 cut(s) 46, 138, 488, 856, 1607, 1616, 1844, 2784, 2793
BstNI CCWGG 2 cut(s) 126, 1802
BstNSI RCATGY 2 cut(s) 897, 2544
BstSCI CCNGG 3 cut(s) 124, 471, 1800
BstSFI CTRYAG 3 cut(s) 155, 344, 1048
BstSLI GKGCMC 1 cut(s) 2440
BstUI CGCG 2 cut(s) 1641, 2305
BstV2I GAAGAC 2 cut(s) 544, 2751
BstX2I RGATCY 4 cut(s) 1000, 1094, 2324, 2804
BstYI RGATCY 4 cut(s) 1000, 1094, 2324, 2804
BstZ17I GTATAC 1 cut(s) 1273
Bsu36I CCTNAGG 2 cut(s) 1449, 1625
BsuI GTATCC 3 cut(s) 187, 1478, 2698
BsuRI GGCC 7 cut(s) 563, 716, 736, 1302, 1646, 1714, 1899
BtgZI GCGATG 2 cut(s) 963, 1803
BtsCI GGATG 7 cut(s) 203, 301, 1414, 1735, 1831, 2032, 2542
BtsI GCAGTG 3 cut(s) 44, 164, 783
BtsIMutI CAGTG 6 cut(s) 16, 44, 164, 783, 1224, 2644
BveI ACCTGC 5 cut(s) 162, 443, 495, 1624, 1793
Cac8I GCNNGC 6 cut(s) 573, 895, 1350, 2305, 2542, 2601
CaiI CAGNNNCTG 1 cut(s) 352
CciI TCATGA 1 cut(s) 84
CfoI GCGC 4 cut(s) 1721, 2305, 2307, 2740
Cfr10I RCCGGY 1 cut(s) 850
Cfr13I GGNCC 3 cut(s) 187, 1712, 1928
CseI GACGC 1 cut(s) 1169
Csp6I GTAC 2 cut(s) 2392, 2482
CviQI GTAC 2 cut(s) 2392, 2482
DraI TTTAAA 1 cut(s) 2569
DraIII CACNNNGTG 1 cut(s) 2162
EaeI YGGCCR 3 cut(s) 561, 1300, 1644
Eam1104I CTCTTC 2 cut(s) 1541, 2176
EarI CTCTTC 2 cut(s) 1541, 2176
EciI GGCGGA 1 cut(s) 1645
Eco130I CCWWGG 1 cut(s) 1680
Eco147I AGGCCT 2 cut(s) 736, 1899
Eco24I GRGCYC 3 cut(s) 422, 1402, 2088
Eco31I GGTCTC 2 cut(s) 34, 1564
Eco47I GGWCC 2 cut(s) 187, 1928
Eco81I CCTNAGG 2 cut(s) 1449, 1625
Eco88I CYCGRG 2 cut(s) 1073, 1403
EcoO109I RGGNCCY 1 cut(s) 187
EcoRII CCWGG 2 cut(s) 124, 1800
EcoT14I CCWWGG 1 cut(s) 1680
EcoT22I ATGCAT 1 cut(s) 2542
EcoT38I GRGCYC 3 cut(s) 422, 1402, 2088
ErhI CCWWGG 1 cut(s) 1680
FalI AAGNNNNNCTT 4 cut(s) 349, 381, 2794, 2826
FaqI GGGAC 6 cut(s) 619, 677, 1183, 2086, 2126, 2333
FauI CCCGC 2 cut(s) 42, 134
FbaI TGATCA 1 cut(s) 2029
FblI GTMKAC 1 cut(s) 1272
FokI GGATG 7 cut(s) 210, 308, 1421, 1742, 1838, 2039, 2549
FriOI GRGCYC 3 cut(s) 422, 1402, 2088
FspBI CTAG 9 cut(s) 572, 674, 845, 873, 1173, 1194, 1245, 2412, 2607
GlaI GCGC 4 cut(s) 1720, 2304, 2306, 2739
GsuI CTGGAG 1 cut(s) 1461
HaeII RGCGCY 1 cut(s) 1722
HaeIII GGCC 7 cut(s) 563, 716, 736, 1302, 1646, 1714, 1899
HapII CCGG 2 cut(s) 472, 851
HgaI GACGC 1 cut(s) 1169
HhaI GCGC 4 cut(s) 1721, 2305, 2307, 2740
Hin6I GCGC 4 cut(s) 1719, 2303, 2305, 2738
HinP1I GCGC 4 cut(s) 1719, 2303, 2305, 2738
HincII GTYRAC 1 cut(s) 1969
HindII GTYRAC 1 cut(s) 1969
HindIII AAGCTT 2 cut(s) 2705, 2759
HpaII CCGG 2 cut(s) 472, 851
HphI GGTGA 6 cut(s) 415, 828, 911, 1605, 1697, 2777
Hpy166II GTNNAC 3 cut(s) 1273, 1670, 1969
Hpy8I GTNNAC 3 cut(s) 1273, 1670, 1969
Hpy99I CGWCG 4 cut(s) 427, 1678, 1727, 2123
HpyCH4III ACNGT 4 cut(s) 995, 1220, 1228, 1674
HpyCH4IV ACGT 2 cut(s) 218, 2121
HpyF10VI GCNNNNNNNGC 9 cut(s) 46, 138, 488, 856, 1607, 1616, 1844, 2784, 2793
HpySE526I ACGT 2 cut(s) 218, 2121
HspAI GCGC 4 cut(s) 1719, 2303, 2305, 2738
Ksp22I TGATCA 1 cut(s) 2029
LmnI GCTCC 4 cut(s) 1405, 1835, 2191, 2371
LweI GCATC 8 cut(s) 969, 991, 1023, 1597, 2114, 2223, 2527, 2722
MaeI CTAG 9 cut(s) 572, 674, 845, 873, 1173, 1194, 1245, 2412, 2607
MaeII ACGT 2 cut(s) 218, 2121
MaeIII GTNAC 6 cut(s) 149, 622, 827, 1378, 2122, 2546
MbiI CCGCTC 1 cut(s) 141
MfeI CAATTG 1 cut(s) 1920
MflI RGATCY 4 cut(s) 1000, 1094, 2324, 2804
MhlI GDGCHC 4 cut(s) 422, 1402, 2088, 2440
MlsI TGGCCA 3 cut(s) 563, 1302, 1646
MluNI TGGCCA 3 cut(s) 563, 1302, 1646
MlyI GAGTC 5 cut(s) 211, 558, 641, 1769, 1817
MmeI TCCRAC 2 cut(s) 1072, 2047
Mox20I TGGCCA 3 cut(s) 563, 1302, 1646
Mph1103I ATGCAT 1 cut(s) 2542
MscI TGGCCA 3 cut(s) 563, 1302, 1646
MslI CAYNNNNRTG 3 cut(s) 875, 1229, 2672
Msp20I TGGCCA 3 cut(s) 563, 1302, 1646
MspA1I CMGCKG 2 cut(s) 1135, 1352
MspCI CTTAAG 1 cut(s) 2278
MspI CCGG 2 cut(s) 472, 851
MspR9I CCNGG 3 cut(s) 126, 473, 1802
MunI CAATTG 1 cut(s) 1920
Mva1269I GAATGC 1 cut(s) 728
MvaI CCWGG 2 cut(s) 126, 1802
MvnI CGCG 2 cut(s) 1641, 2305
MwoI GCNNNNNNNGC 9 cut(s) 46, 138, 488, 856, 1607, 1616, 1844, 2784, 2793
NciI CCSGG 1 cut(s) 473
NheI GCTAGC 1 cut(s) 571
NlaIV GGNNCC 5 cut(s) 189, 618, 1096, 1401, 2367
NmuCI GTSAC 1 cut(s) 2546
NsiI ATGCAT 1 cut(s) 2542
NspI RCATGY 2 cut(s) 897, 2544
NspV TTCGAA 2 cut(s) 459, 600
OliI CACNNNNGTG 1 cut(s) 875
PaeI GCATGC 2 cut(s) 897, 2544
PagI TCATGA 1 cut(s) 84
PaqCI CACCTGC 1 cut(s) 1624
PauI GCGCGC 1 cut(s) 2303
PceI AGGCCT 2 cut(s) 736, 1899
PcsI WCGNNNNNNNCGW 1 cut(s) 1401
PctI GAATGC 1 cut(s) 728
PfeI GAWTC 8 cut(s) 79, 279, 349, 371, 461, 597, 681, 1910
PflMI CCANNNNNTGG 1 cut(s) 2315
Ple19I CGATCG 1 cut(s) 288
PleI GAGTC 5 cut(s) 210, 557, 640, 1768, 1816
PpsI GAGTC 5 cut(s) 210, 557, 640, 1768, 1816
PpuMI RGGWCCY 1 cut(s) 187
PsiI TTATAA 2 cut(s) 1662, 1773
Psp5II RGGWCCY 1 cut(s) 187
Psp6I CCWGG 2 cut(s) 124, 1800
PspGI CCWGG 2 cut(s) 124, 1800
PspN4I GGNNCC 5 cut(s) 189, 618, 1096, 1401, 2367
PspPI GGNCC 3 cut(s) 187, 1712, 1928
PspPPI RGGWCCY 1 cut(s) 187
PstI CTGCAG 3 cut(s) 159, 348, 1052
PstNI CAGNNNCTG 1 cut(s) 352
PsuI RGATCY 4 cut(s) 1000, 1094, 2324, 2804
PteI GCGCGC 1 cut(s) 2303
PvuI CGATCG 1 cut(s) 288
PvuII CAGCTG 1 cut(s) 1352
RsaI GTAC 2 cut(s) 2393, 2483
RsaNI GTAC 2 cut(s) 2392, 2482
RseI CAYNNNNRTG 3 cut(s) 875, 1229, 2672
Sau96I GGNCC 3 cut(s) 187, 1712, 1928
SbfI CCTGCAGG 1 cut(s) 1052
SchI GAGTC 5 cut(s) 211, 558, 641, 1769, 1817
ScrFI CCNGG 3 cut(s) 126, 473, 1802
SdaI CCTGCAGG 1 cut(s) 1052
SduI GDGCHC 4 cut(s) 422, 1402, 2088, 2440
SfaNI GCATC 8 cut(s) 969, 991, 1023, 1597, 2114, 2223, 2527, 2722
SfcI CTRYAG 3 cut(s) 155, 344, 1048
SfuI TTCGAA 2 cut(s) 459, 600
SinI GGWCC 2 cut(s) 187, 1928
SmiMI CAYNNNNRTG 3 cut(s) 875, 1229, 2672
SmlI CTYRAG 4 cut(s) 647, 1114, 1307, 2278
SmoI CTYRAG 4 cut(s) 647, 1114, 1307, 2278
SpeI ACTAGT 2 cut(s) 872, 1193
SphI GCATGC 2 cut(s) 897, 2544
Sse8387I CCTGCAGG 1 cut(s) 1052
SseBI AGGCCT 2 cut(s) 736, 1899
SsiI CCGC 9 cut(s) 49, 141, 195, 897, 1135, 1438, 1630, 2063, 2236
SspMI CTAG 9 cut(s) 572, 674, 845, 873, 1173, 1194, 1245, 2412, 2607
StuI AGGCCT 2 cut(s) 736, 1899
StyD4I CCNGG 3 cut(s) 124, 471, 1800
StyI CCWWGG 1 cut(s) 1680
TaaI ACNGT 4 cut(s) 995, 1220, 1228, 1674
TaiI ACGT 2 cut(s) 221, 2124
TaqI TCGA 5 cut(s) 422, 459, 600, 963, 2216
TaqII GACCGA 1 cut(s) 1908
TatI WGTACW 1 cut(s) 2481
TauI GCSGC 1 cut(s) 1440
TfiI GAWTC 8 cut(s) 79, 279, 349, 371, 461, 597, 681, 1910
TscAI CASTG 6 cut(s) 23, 51, 164, 790, 1231, 2644
TseFI GTSAC 1 cut(s) 2546
Tsp45I GTSAC 1 cut(s) 2546
TspGWI ACGGA 3 cut(s) 377, 440, 444
TspRI CASTG 6 cut(s) 23, 51, 164, 790, 1231, 2644
Van91I CCANNNNNTGG 1 cut(s) 2315
Vha464I CTTAAG 1 cut(s) 2278
VpaK11BI GGWCC 2 cut(s) 187, 1928
XapI RAATTY 4 cut(s) 239, 761, 1997, 2378
XbaI TCTAGA 1 cut(s) 1244
XceI RCATGY 2 cut(s) 897, 2544
XcmI CCANNNNNNNNNTGG 1 cut(s) 1310
XmiI GTMKAC 1 cut(s) 1272
XspI CTAG 9 cut(s) 572, 674, 845, 873, 1173, 1194, 1245, 2412, 2607
Zsp2I ATGCAT 1 cut(s) 2542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.