Rh5DG280000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000153
Physical Location & Seq
Reverse (-)
34277138 .. 34281951
4814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG280000.1

Sequence Viewer

Length: 1206 bp
ATGGGTTTCACTCGGACAGATGGTATTTCTTGCAGGGGTATGCTCTCTGATAGTCTCGAGAAGAAAGGCTGTGTTGGGTCCCCTACATCCACGTTCTTGAGGTTCTGGGAGTTGCGGCGGTGCGAATTTAGGAGGTTTATTCAAACTGGTGGGACTAGGTTGCGTCCGAAGGCCACTAGTGAGAACAAGATACTACTCCACAGTAGCACTGTCATGGGTGTCATGTCTAGACTTAACCTTCCCTATACTGAGGTATACTCGAATGGTATAAAGAGTGTGGTTGGCCACCTCAAGGGTGGTAAAAGTGGAGATGATCCTGAAGTAGAGTTGCCAGCTGCCGAAGTGGAGAAAGGTAGCAAGAGCACTACAAAGGTTAAAGTCAGGGCTTCCGAGGATGGAGGGGAAGGCAGAAGGAAGGTTCGTCGCTTCAAACCTAAGGTAGCCAAAGATCGTATCCCTCCTCCAGTAGTCAAGAGTGCCTTTGGTGTTAAAGTGATACTGCCATCGAGTTTGGCTTGTGAAAAGGGGAAGAAGAGGGAAGCTTCCTCTGCCCTGAGACCAAGTGGGGTTATTAAGAGGAAGGTTGCAGATGATGCCTCACCTGTCGTCCTTAGGCGGAGTTCTCGTGTGGCCAACATGAATTTTTGTAAACGTAAGCCGTCGTCCAAGGGTGATGTTTATGTTGATCTTAGTGATGGGCCAAGTGTCGACGGGGATAGTAGCCCCTTGAGTGATGAGGAGAATGAGTCTGACACTTATGAGGGAAAGACCTGCGATGGTGGTAGCCAGGTGGAGTCTTTTGAAGATGAGGATGGTCAGGGTAATCCAACTGTAGCTTCGATGAGGGAGGATAGTTGCGGTGATAACCAAGGTGCTCATGTTGGTGTCTTGGTGGGGGATTACGAACATAATGTAACTGGTGCTCTAATGCAGGAATCTGCTGTAAATGTTGGCCCTTGTGTAGATAATTGTAATATGCAGGACATTGCCATTAGTGACTTGGCGAAAGAATCTACTGCGGACGATAGTCTTTGTGAGGATGACCATAATGAGCGGGGTGGATTATTTTTATTGACAGTTGGAGGGACATCATTTGAGCCCCATCTCCCTGAGACAGCATTGGGGGACGAAGGCGTTACTGTTGCAATCTTGGTCAGTATAGGGGTTCCGCTGTGCGTTGCCTCCGCTTGTTCTCTTGCTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

401

Amino Acids

42.79

Weight (kDa)

5.71

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 779
AccBSI CCGCTC 1 cut(s) 1054
AccI GTMKAC 2 cut(s) 255, 708
AciI CCGC 8 cut(s) 115, 118, 616, 858, 1019, 1054, 1169, 1185
AclWI GGATC 1 cut(s) 308
AcoI YGGCCR 2 cut(s) 283, 630
AcsI RAATTY 2 cut(s) 125, 640
AcuI CTGAAG 1 cut(s) 339
AfiI CCNNNNNNNGG 1 cut(s) 292
AgsI TTSAA 3 cut(s) 143, 430, 803
AhlI ACTAGT 1 cut(s) 176
AjnI CCWGG 1 cut(s) 786
AjuI GAANNNNNNNTTGG 2 cut(s) 820, 852
AluBI AGCT 3 cut(s) 335, 542, 836
AluI AGCT 3 cut(s) 335, 542, 836
Alw21I GWGCWC 3 cut(s) 365, 877, 925
Alw26I GTCTC 3 cut(s) 59, 550, 1106
AlwI GGATC 1 cut(s) 308
Ama87I CYCGRG 1 cut(s) 56
AoxI GGCC 5 cut(s) 171, 283, 630, 698, 952
ApeKI GCWGC 1 cut(s) 335
ApoI RAATTY 2 cut(s) 125, 640
AspS9I GGNCC 3 cut(s) 78, 698, 953
AsuHPI GGTGA 3 cut(s) 591, 683, 872
AvaI CYCGRG 1 cut(s) 56
AvaII GGWCC 1 cut(s) 78
AxyI CCTNAGG 2 cut(s) 435, 611
BalI TGGCCA 2 cut(s) 285, 632
BanII GRGCYC 1 cut(s) 1101
BauI CACGAG 1 cut(s) 624
Bbv12I GWGCWC 3 cut(s) 365, 877, 925
BbvI GCAGC 1 cut(s) 322
BccI CCATC 7 cut(s) 14, 389, 511, 689, 770, 806, 1110
BceAI ACGGC 1 cut(s) 643
BciT130I CCWGG 1 cut(s) 788
BciVI GTATCC 1 cut(s) 464
BcoDI GTCTC 3 cut(s) 59, 550, 1106
BcuI ACTAGT 1 cut(s) 176
BfaI CTAG 3 cut(s) 156, 177, 228
BfmI CTRYAG 1 cut(s) 831
BfuAI ACCTGC 1 cut(s) 779
BfuI GTATCC 1 cut(s) 464
BisI GCNGC 2 cut(s) 116, 336
BlsI GCNGC 2 cut(s) 117, 337
Bme1390I CCNGG 1 cut(s) 788
Bme18I GGWCC 1 cut(s) 78
BmeT110I CYCGRG 1 cut(s) 56
BmgT120I GGNCC 3 cut(s) 78, 698, 953
BmiI GGNNCC 3 cut(s) 79, 80, 1167
BmrFI CCNGG 1 cut(s) 788
BmsI GCATC 1 cut(s) 583
BoxI GACNNNNGTC 1 cut(s) 1026
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 447
BpuEI CTTGAG 3 cut(s) 118, 275, 748
BsaI GGTCTC 1 cut(s) 550
BsaJI CCNNGG 3 cut(s) 390, 666, 868
BsaXI ACNNNNNCTCC 4 cut(s) 610, 640, 731, 761
Bsc4I CCNNNNNNNGG 1 cut(s) 292
Bse1I ACTGG 3 cut(s) 151, 464, 922
Bse21I CCTNAGG 2 cut(s) 435, 611
Bse3DI GCAATG 1 cut(s) 984
BseBI CCWGG 1 cut(s) 788
BseDI CCNNGG 3 cut(s) 390, 666, 868
BseGI GGATG 4 cut(s) 86, 400, 817, 1045
BseLI CCNNNNNNNGG 1 cut(s) 292
BseMI GCAATG 1 cut(s) 984
BseMII CTCAG 3 cut(s) 240, 545, 1101
BseNI ACTGG 3 cut(s) 151, 464, 922
BseRI GAGGAG 2 cut(s) 450, 752
BseXI GCAGC 1 cut(s) 322
BshFI GGCC 5 cut(s) 173, 285, 632, 700, 954
BsiHKAI GWGCWC 3 cut(s) 365, 877, 925
BsiHKCI CYCGRG 1 cut(s) 56
BslFI GGGAC 4 cut(s) 64, 166, 1099, 1139
BslI CCNNNNNNNGG 1 cut(s) 292
BsmAI GTCTC 3 cut(s) 59, 550, 1106
BsmFI GGGAC 4 cut(s) 64, 166, 1099, 1139
BsnI GGCC 5 cut(s) 173, 285, 632, 700, 954
Bso31I GGTCTC 1 cut(s) 550
BsoBI CYCGRG 1 cut(s) 56
Bsp1286I GDGCHC 4 cut(s) 365, 877, 925, 1101
Bsp143I GATC 3 cut(s) 313, 448, 685
BspACI CCGC 8 cut(s) 115, 118, 616, 858, 1019, 1054, 1169, 1185
BspANI GGCC 5 cut(s) 173, 285, 632, 700, 954
BspCNI CTCAG 3 cut(s) 241, 546, 1102
BspLI GGNNCC 3 cut(s) 79, 80, 1167
BspMI ACCTGC 1 cut(s) 779
BspPI GGATC 1 cut(s) 308
BspTNI GGTCTC 1 cut(s) 550
BsrBI CCGCTC 1 cut(s) 1054
BsrDI GCAATG 1 cut(s) 984
BsrI ACTGG 3 cut(s) 151, 464, 922
BssECI CCNNGG 3 cut(s) 390, 666, 868
BssMI GATC 3 cut(s) 313, 448, 685
BssNAI GTATAC 1 cut(s) 256
BssSI CACGAG 1 cut(s) 624
BssT1I CCWWGG 2 cut(s) 666, 868
Bst1107I GTATAC 1 cut(s) 256
Bst2BI CACGAG 1 cut(s) 624
Bst2UI CCWGG 1 cut(s) 788
Bst4CI ACNGT 5 cut(s) 203, 211, 832, 1078, 1141
Bst6I CTCTTC 1 cut(s) 527
BstAPI GCANNNNNTGC 1 cut(s) 593
BstC8I GCNNGC 1 cut(s) 333
BstDEI CTNAG 6 cut(s) 249, 435, 554, 611, 689, 1110
BstF5I GGATG 4 cut(s) 86, 400, 817, 1045
BstKTI GATC 3 cut(s) 316, 451, 688
BstMAI GTCTC 3 cut(s) 59, 550, 1106
BstMBI GATC 3 cut(s) 313, 448, 685
BstMWI GCNNNNNNNGC 2 cut(s) 548, 593
BstNI CCWGG 1 cut(s) 788
BstPAI GACNNNNGTC 1 cut(s) 1026
BstSCI CCNGG 1 cut(s) 786
BstSFI CTRYAG 1 cut(s) 831
BstV1I GCAGC 1 cut(s) 322
BstZ17I GTATAC 1 cut(s) 256
Bsu36I CCTNAGG 2 cut(s) 435, 611
BsuI GTATCC 1 cut(s) 464
BsuRI GGCC 5 cut(s) 173, 285, 632, 700, 954
BtgZI GCGATG 1 cut(s) 789
BtsCI GGATG 4 cut(s) 86, 400, 817, 1045
BtsIMutI CAGTG 1 cut(s) 207
BveI ACCTGC 1 cut(s) 779
Cac8I GCNNGC 1 cut(s) 333
Cfr13I GGNCC 3 cut(s) 78, 698, 953
CseI GACGC 1 cut(s) 152
CviAII CATG 4 cut(s) 214, 223, 637, 878
DdeI CTNAG 6 cut(s) 249, 435, 554, 611, 689, 1110
DpnI GATC 3 cut(s) 315, 450, 687
DpnII GATC 3 cut(s) 313, 448, 685
EaeI YGGCCR 2 cut(s) 283, 630
Eam1104I CTCTTC 1 cut(s) 527
EarI CTCTTC 1 cut(s) 527
EciI GGCGGA 1 cut(s) 631
Eco130I CCWWGG 2 cut(s) 666, 868
Eco24I GRGCYC 1 cut(s) 1101
Eco31I GGTCTC 1 cut(s) 550
Eco47I GGWCC 1 cut(s) 78
Eco57I CTGAAG 1 cut(s) 339
Eco81I CCTNAGG 2 cut(s) 435, 611
Eco88I CYCGRG 1 cut(s) 56
EcoO109I RGGNCCY 1 cut(s) 78
EcoRII CCWGG 1 cut(s) 786
EcoT14I CCWWGG 2 cut(s) 666, 868
EcoT38I GRGCYC 1 cut(s) 1101
ErhI CCWWGG 2 cut(s) 666, 868
FaeI CATG 4 cut(s) 217, 226, 640, 881
FalI AAGNNNNNCTT 2 cut(s) 464, 496
FaqI GGGAC 4 cut(s) 64, 166, 1099, 1139
FatI CATG 4 cut(s) 213, 222, 636, 877
FauI CCCGC 1 cut(s) 1047
FblI GTMKAC 2 cut(s) 255, 708
Fnu4HI GCNGC 2 cut(s) 116, 336
FokI GGATG 4 cut(s) 73, 407, 824, 1052
FriOI GRGCYC 1 cut(s) 1101
Fsp4HI GCNGC 2 cut(s) 116, 336
FspBI CTAG 3 cut(s) 156, 177, 228
GluI GCNGC 2 cut(s) 116, 336
GsuI CTGGAG 1 cut(s) 447
HaeIII GGCC 5 cut(s) 173, 285, 632, 700, 954
HgaI GACGC 1 cut(s) 152
Hin1II CATG 4 cut(s) 217, 226, 640, 881
HincII GTYRAC 1 cut(s) 709
HindII GTYRAC 1 cut(s) 709
HindIII AAGCTT 1 cut(s) 540
HinfI GANTC 4 cut(s) 746, 794, 935, 1010
HphI GGTGA 3 cut(s) 591, 683, 872
Hpy166II GTNNAC 3 cut(s) 256, 650, 709
Hpy188I TCNGA 5 cut(s) 15, 49, 168, 391, 751
Hpy188III TCNNGA 6 cut(s) 56, 58, 97, 228, 317, 472
Hpy8I GTNNAC 3 cut(s) 256, 650, 709
Hpy99I CGWCG 3 cut(s) 426, 664, 713
HpyAV CCTTC 7 cut(s) 163, 248, 398, 405, 409, 574, 1124
HpyCH4III ACNGT 5 cut(s) 203, 211, 832, 1078, 1141
HpyCH4IV ACGT 2 cut(s) 92, 652
HpyCH4V TGCA 5 cut(s) 33, 587, 931, 979, 1145
HpyF10VI GCNNNNNNNGC 2 cut(s) 548, 593
HpyF3I CTNAG 6 cut(s) 249, 435, 554, 611, 689, 1110
HpySE526I ACGT 2 cut(s) 92, 652
Hsp92II CATG 4 cut(s) 217, 226, 640, 881
KflI GGGWCCC 1 cut(s) 78
Kzo9I GATC 3 cut(s) 313, 448, 685
Lsp1109I GCAGC 1 cut(s) 322
LweI GCATC 1 cut(s) 583
MaeI CTAG 3 cut(s) 156, 177, 228
MaeII ACGT 2 cut(s) 92, 652
MaeIII GTNAC 3 cut(s) 913, 995, 1135
MalI GATC 3 cut(s) 315, 450, 687
MbiI CCGCTC 1 cut(s) 1054
MboI GATC 3 cut(s) 313, 448, 685
MboII GAAGA 4 cut(s) 73, 541, 544, 815
MhlI GDGCHC 4 cut(s) 365, 877, 925, 1101
MlsI TGGCCA 2 cut(s) 285, 632
MluCI AATT 3 cut(s) 125, 640, 967
MluNI TGGCCA 2 cut(s) 285, 632
MlyI GAGTC 2 cut(s) 755, 803
MmeI TCCRAC 2 cut(s) 851, 1060
Mox20I TGGCCA 2 cut(s) 285, 632
MscI TGGCCA 2 cut(s) 285, 632
MseI TTAA 4 cut(s) 234, 375, 489, 573
MslI CAYNNNNRTG 2 cut(s) 212, 882
Msp20I TGGCCA 2 cut(s) 285, 632
MspA1I CMGCKG 2 cut(s) 335, 1171
MspR9I CCNGG 1 cut(s) 788
MvaI CCWGG 1 cut(s) 788
MwoI GCNNNNNNNGC 2 cut(s) 548, 593
NdeII GATC 3 cut(s) 313, 448, 685
NlaIII CATG 4 cut(s) 217, 226, 640, 881
NlaIV GGNNCC 3 cut(s) 79, 80, 1167
NmuCI GTSAC 1 cut(s) 995
PaeR7I CTCGAG 1 cut(s) 56
PfeI GAWTC 2 cut(s) 935, 1010
PkrI GCNGC 2 cut(s) 117, 337
PleI GAGTC 2 cut(s) 754, 802
PpsI GAGTC 2 cut(s) 754, 802
PpuMI RGGWCCY 1 cut(s) 78
PshAI GACNNNNGTC 1 cut(s) 1026
Psp5II RGGWCCY 1 cut(s) 78
Psp6I CCWGG 1 cut(s) 786
PspGI CCWGG 1 cut(s) 786
PspN4I GGNNCC 3 cut(s) 79, 80, 1167
PspPI GGNCC 3 cut(s) 78, 698, 953
PspPPI RGGWCCY 1 cut(s) 78
PvuII CAGCTG 1 cut(s) 335
RseI CAYNNNNRTG 2 cut(s) 212, 882
SalI GTCGAC 1 cut(s) 707
SaqAI TTAA 4 cut(s) 234, 375, 489, 573
SatI GCNGC 2 cut(s) 116, 336
Sau3AI GATC 3 cut(s) 313, 448, 685
Sau96I GGNCC 3 cut(s) 78, 698, 953
SchI GAGTC 2 cut(s) 755, 803
ScrFI CCNGG 1 cut(s) 788
SduI GDGCHC 4 cut(s) 365, 877, 925, 1101
SfaNI GCATC 1 cut(s) 583
SfcI CTRYAG 1 cut(s) 831
Sfr274I CTCGAG 1 cut(s) 56
SinI GGWCC 1 cut(s) 78
SlaI CTCGAG 1 cut(s) 56
SmiMI CAYNNNNRTG 2 cut(s) 212, 882
SmlI CTYRAG 4 cut(s) 56, 97, 290, 727
SmoI CTYRAG 4 cut(s) 56, 97, 290, 727
SpeI ACTAGT 1 cut(s) 176
Sse9I AATT 3 cut(s) 125, 640, 967
SsiI CCGC 8 cut(s) 115, 118, 616, 858, 1019, 1054, 1169, 1185
SspMI CTAG 3 cut(s) 156, 177, 228
StyD4I CCNGG 1 cut(s) 786
StyI CCWWGG 2 cut(s) 666, 868
TaaI ACNGT 5 cut(s) 203, 211, 832, 1078, 1141
TaiI ACGT 2 cut(s) 95, 655
TaqI TCGA 5 cut(s) 57, 260, 506, 708, 839
TasI AATT 3 cut(s) 125, 640, 967
TauI GCSGC 1 cut(s) 118
TfiI GAWTC 2 cut(s) 935, 1010
Tru1I TTAA 4 cut(s) 234, 375, 489, 573
Tru9I TTAA 4 cut(s) 234, 375, 489, 573
TscAI CASTG 1 cut(s) 214
TseFI GTSAC 1 cut(s) 995
TseI GCWGC 1 cut(s) 335
Tsp45I GTSAC 1 cut(s) 995
TspDTI ATGAA 1 cut(s) 653
TspRI CASTG 1 cut(s) 214
VpaK11BI GGWCC 1 cut(s) 78
XapI RAATTY 2 cut(s) 125, 640
XbaI TCTAGA 1 cut(s) 227
XcmI CCANNNNNNNNNTGG 2 cut(s) 293, 997
XhoI CTCGAG 1 cut(s) 56
XmiI GTMKAC 2 cut(s) 255, 708
XspI CTAG 3 cut(s) 156, 177, 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.