Rmu_ssc0000409.1_g000013

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000409.1
OG0000153
Physical Location & Seq
Forward (+)
51883 .. 54488
2606 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000409.1_g000013.1.cds

Sequence Viewer

Length: 1950 bp
atgcaatgttcttggggagaatttacaccttctctggaagatgtttgcaatattatgagaatcccgatcgttggggacggtaatcccttgaagatagagctggatagggtaagacgcttttggggctcaacggatggaggcaagtttaagcatgatgcaggttttgattatggcttccgggtggaagctatgtttgcttactggttgagcaggtttatttttgcggattttccctatgagaatgtgcagcaacgatatctagcttcattccttcaactatttgtatgggagagatttaaaggcttggtcgtggaacctgtaacctctaagtcccttcaccaacttgaagggggcaaaagagatttcaatgtagtagggttcccattgtgctgcatatggttcagaagaaaagtcaagaagggtgcatttaggcctgctattctgaatgacatcggacaattcaatttcaggccatattttactgctcacggcttccagacatttcctttctttaatctagagggtaactcattagctttcttgggatccgttgagctgcttctagccactaatgtgcagtccataatagcatatgatgatttctttgaccttgcggtggagatatatttccctcatagagttaaaaggcaatttggcatcgatcaggatgtgtcatctcatctatattatggtggacatctcgggaattgcatcatggatgtcacttggatagatggtatttttcttgcagtgactggtggtactaggttgtgtccaaaagcaaatagtgagaacaagaggctgctctgcagtagcactgtcatgggtgtcatgtctagacttaaccttccctatattgaggtatactcgaatggtgtaaatcatgtggtcggtcatctcaaggatggcaaaggtggggatcattccaaggtagacttgccagctgctggaatggaaaagggtgacaagtgtgcaacaaagggcaaagtcatggcttccaaggatagagaagaaagtaaaagaaatgtttgccgcttcaaacctaaggtggaaaaggattgcatccctcttccagtagtcaagagtgcctttagtattagagtgatactgccatcgagtttggctgatgaaaaagggaaaaagaggaaggctaatgaaaaagggaagaagaggaaagatgcttctacctcaagaccgagcggagctactaagcgaaaggatatagatgatgcctcacctgctgtccttaggcagagttctcgtgtcgccaacatgagtttttctaaacgtaaacctctcgggaaaaaggacaatgtcggctcccctacattaacattcttgagattttgggagctacagcggtacgagttcaggaggtttattaagactggtggtactaggttgtgtccgaaagcaaatagtgagaacaagaggctgctctgcagtagcactgtcatgggtgtcatgtctagacttaaccttccctatattgaggtatactcgaatggtgtaaatcatgtggtcggtcatctcaaggatggcaaaggtggggatcattccaaggtagacttgccagctgctggaatggaaaagggtgacaagtgtgcaacaaagggcaaagtcatggcttccaaggatagagaagaaagtaaaagaaatgtttgccgcttcaaacctaaggtggaaaaggattgcatccctcttccagtagtcaagagtgcctttagtattagagtgatactgccatcgagtttggctgatgaaaaagggaaaaagaggaaggctaatgaaaaagggaagaagaggaaagatgcttctacctcaagaccgagcggagctactaagcgaaaggatatagatgatgcctcacctgctgtccttaggcagagttctcgtgtcgccaacatgagtttttctaaacgtaaaccgtcgtctaagggcgctatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

649

Amino Acids

72.64

Weight (kDa)

9.82

Isoelectric Point (pI)

40.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1246, 1879
Acc36I ACCTGC 4 cut(s) 149, 201, 1246, 1879
AccB7I CCANNNNNTGG 2 cut(s) 947, 1580
AccBSI CCGCTC 2 cut(s) 1200, 1833
AccI GTMKAC 4 cut(s) 864, 933, 1497, 1566
AciI CCGC 7 cut(s) 224, 614, 1033, 1200, 1360, 1666, 1833
AclWI GGATC 4 cut(s) 540, 553, 927, 1560
AcsI RAATTY 1 cut(s) 20
AfaI GTAC 3 cut(s) 763, 1364, 1396
AfiI CCNNNNNNNGG 4 cut(s) 71, 616, 947, 1580
AgsI TTSAA 7 cut(s) 91, 275, 347, 367, 463, 1039, 1672
AleI CACNNNNGTG 1 cut(s) 572
AlwI GGATC 4 cut(s) 540, 553, 927, 1560
AlwNI CAGNNNCTG 3 cut(s) 755, 947, 1580
Ama87I CYCGRG 2 cut(s) 701, 1298
AoxI GGCC 2 cut(s) 431, 470
ApeKI GCWGC 7 cut(s) 247, 390, 556, 802, 944, 1435, 1577
ApoI RAATTY 1 cut(s) 20
AspLEI GCGC 1 cut(s) 1943
AsuC2I CCSGG 1 cut(s) 179
AsuHPI GGTGA 5 cut(s) 329, 974, 1227, 1607, 1860
AvaI CYCGRG 2 cut(s) 701, 1298
AxyI CCTNAGG 4 cut(s) 1044, 1247, 1677, 1880
BamHI GGATCC 1 cut(s) 545
BanII GRGCYC 1 cut(s) 128
BauI CACGAG 2 cut(s) 1260, 1893
BbvI GCAGC 7 cut(s) 259, 377, 543, 789, 931, 1422, 1564
BccI CCATC 6 cut(s) 128, 728, 899, 1120, 1532, 1753
BceAI ACGGC 1 cut(s) 505
BcgI CGANNNNNNTGC 4 cut(s) 1241, 1275, 1874, 1908
BcnI CCSGG 1 cut(s) 179
BfaI CTAG 7 cut(s) 260, 518, 563, 765, 837, 1398, 1470
BfmI CTRYAG 3 cut(s) 808, 1355, 1441
BfoI RGCGCY 1 cut(s) 1944
BfuAI ACCTGC 4 cut(s) 149, 201, 1246, 1879
BisI GCNGC 9 cut(s) 248, 391, 557, 803, 945, 1033, 1436, 1578, 1666
BlsI GCNGC 9 cut(s) 249, 392, 558, 804, 946, 1034, 1437, 1579, 1667
Bme1390I CCNGG 1 cut(s) 179
BmeT110I CYCGRG 2 cut(s) 701, 1298
BmiI GGNNCC 4 cut(s) 315, 380, 547, 1321
BmrFI CCNGG 1 cut(s) 179
BmsI GCATC 9 cut(s) 145, 666, 720, 1071, 1168, 1219, 1704, 1801, 1852
BplI GAGNNNNNCTC 6 cut(s) 512, 544, 851, 883, 1484, 1516
BpuEI CTTGAG 5 cut(s) 884, 1174, 1360, 1517, 1807
BpuMI CCSGG 1 cut(s) 179
Bsa29I ATCGAT 1 cut(s) 660
BsaJI CCNNGG 4 cut(s) 927, 999, 1560, 1632
Bsc4I CCNNNNNNNGG 4 cut(s) 71, 616, 947, 1580
Bse1I ACTGG 5 cut(s) 206, 760, 1073, 1393, 1706
Bse21I CCTNAGG 4 cut(s) 1044, 1247, 1677, 1880
Bse3DI GCAATG 1 cut(s) 11
BseCI ATCGAT 1 cut(s) 660
BseDI CCNNGG 4 cut(s) 927, 999, 1560, 1632
BseGI GGATG 7 cut(s) 139, 673, 724, 910, 1062, 1543, 1695
BseLI CCNNNNNNNGG 4 cut(s) 71, 616, 947, 1580
BseMI GCAATG 1 cut(s) 11
BseNI ACTGG 5 cut(s) 206, 760, 1073, 1393, 1706
BseXI GCAGC 7 cut(s) 259, 377, 543, 789, 931, 1422, 1564
BsgI GTGCAG 2 cut(s) 266, 596
Bsh1285I CGRYCG 1 cut(s) 69
BshFI GGCC 2 cut(s) 433, 472
BshVI ATCGAT 1 cut(s) 660
BsiEI CGRYCG 1 cut(s) 69
BsiHKCI CYCGRG 2 cut(s) 701, 1298
BsiSI CCGG 1 cut(s) 178
BslFI GGGAC 2 cut(s) 89, 316
BslI CCNNNNNNNGG 4 cut(s) 71, 616, 947, 1580
BsmFI GGGAC 2 cut(s) 89, 316
BsnI GGCC 2 cut(s) 433, 472
BsoBI CYCGRG 2 cut(s) 701, 1298
Bsp1286I GDGCHC 1 cut(s) 128
Bsp143I GATC 5 cut(s) 66, 545, 661, 919, 1552
BspACI CCGC 7 cut(s) 224, 614, 1033, 1200, 1360, 1666, 1833
BspANI GGCC 2 cut(s) 433, 472
BspDI ATCGAT 1 cut(s) 660
BspLI GGNNCC 4 cut(s) 315, 380, 547, 1321
BspMAI CTGCAG 2 cut(s) 812, 1445
BspMI ACCTGC 4 cut(s) 149, 201, 1246, 1879
BspPI GGATC 4 cut(s) 540, 553, 927, 1560
BsrBI CCGCTC 2 cut(s) 1200, 1833
BsrDI GCAATG 1 cut(s) 11
BsrI ACTGG 5 cut(s) 206, 760, 1073, 1393, 1706
BssECI CCNNGG 4 cut(s) 927, 999, 1560, 1632
BssMI GATC 5 cut(s) 66, 545, 661, 919, 1552
BssNAI GTATAC 2 cut(s) 865, 1498
BssSI CACGAG 2 cut(s) 1260, 1893
BssT1I CCWWGG 4 cut(s) 927, 999, 1560, 1632
Bst1107I GTATAC 2 cut(s) 865, 1498
Bst2BI CACGAG 2 cut(s) 1260, 1893
Bst4CI ACNGT 4 cut(s) 80, 820, 1453, 1929
Bst6I CTCTTC 4 cut(s) 1074, 1163, 1707, 1796
BstC8I GCNNGC 3 cut(s) 435, 942, 1575
BstDEI CTNAG 8 cut(s) 327, 1044, 1209, 1247, 1677, 1842, 1880, 1935
BstF5I GGATG 7 cut(s) 139, 673, 724, 910, 1062, 1543, 1695
BstH2I RGCGCY 1 cut(s) 1944
BstHHI GCGC 1 cut(s) 1943
BstKTI GATC 5 cut(s) 69, 548, 664, 922, 1555
BstMBI GATC 5 cut(s) 66, 545, 661, 919, 1552
BstMCI CGRYCG 1 cut(s) 69
BstMWI GCNNNNNNNGC 4 cut(s) 123, 194, 1238, 1871
BstSCI CCNGG 1 cut(s) 177
BstSFI CTRYAG 3 cut(s) 808, 1355, 1441
BstV1I GCAGC 7 cut(s) 259, 377, 543, 789, 931, 1422, 1564
BstX2I RGATCY 1 cut(s) 545
BstYI RGATCY 1 cut(s) 545
BstZ17I GTATAC 2 cut(s) 865, 1498
Bsu15I ATCGAT 1 cut(s) 660
Bsu36I CCTNAGG 4 cut(s) 1044, 1247, 1677, 1880
BsuRI GGCC 2 cut(s) 433, 472
BsuTUI ATCGAT 1 cut(s) 660
BtsCI GGATG 7 cut(s) 139, 673, 724, 910, 1062, 1543, 1695
BtsI GCAGTG 1 cut(s) 756
BtsIMutI CAGTG 3 cut(s) 756, 816, 1449
BveI ACCTGC 4 cut(s) 149, 201, 1246, 1879
Cac8I GCNNGC 3 cut(s) 435, 942, 1575
CaiI CAGNNNCTG 3 cut(s) 755, 947, 1580
CfoI GCGC 1 cut(s) 1943
ClaI ATCGAT 1 cut(s) 660
CseI GACGC 1 cut(s) 123
Csp6I GTAC 3 cut(s) 762, 1363, 1395
CviQI GTAC 3 cut(s) 762, 1363, 1395
DdeI CTNAG 8 cut(s) 327, 1044, 1209, 1247, 1677, 1842, 1880, 1935
DpnI GATC 5 cut(s) 68, 547, 663, 921, 1554
DpnII GATC 5 cut(s) 66, 545, 661, 919, 1552
DraI TTTAAA 1 cut(s) 298
Eam1104I CTCTTC 4 cut(s) 1074, 1163, 1707, 1796
EarI CTCTTC 4 cut(s) 1074, 1163, 1707, 1796
Eco130I CCWWGG 4 cut(s) 927, 999, 1560, 1632
Eco147I AGGCCT 1 cut(s) 433
Eco24I GRGCYC 1 cut(s) 128
Eco32I GATATC 1 cut(s) 257
Eco81I CCTNAGG 4 cut(s) 1044, 1247, 1677, 1880
Eco88I CYCGRG 2 cut(s) 701, 1298
EcoRV GATATC 1 cut(s) 257
EcoT14I CCWWGG 4 cut(s) 927, 999, 1560, 1632
EcoT38I GRGCYC 1 cut(s) 128
ErhI CCWWGG 4 cut(s) 927, 999, 1560, 1632
FalI AAGNNNNNCTT 8 cut(s) 920, 952, 1073, 1105, 1553, 1585, 1706, 1738
FaqI GGGAC 2 cut(s) 89, 316
FauNDI CATATG 2 cut(s) 395, 592
FblI GTMKAC 4 cut(s) 864, 933, 1497, 1566
Fnu4HI GCNGC 9 cut(s) 248, 391, 557, 803, 945, 1033, 1436, 1578, 1666
FokI GGATG 7 cut(s) 146, 680, 731, 917, 1049, 1550, 1682
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 9 cut(s) 248, 391, 557, 803, 945, 1033, 1436, 1578, 1666
FspBI CTAG 7 cut(s) 260, 518, 563, 765, 837, 1398, 1470
GlaI GCGC 1 cut(s) 1942
GluI GCNGC 9 cut(s) 248, 391, 557, 803, 945, 1033, 1436, 1578, 1666
HaeII RGCGCY 1 cut(s) 1944
HaeIII GGCC 2 cut(s) 433, 472
HapII CCGG 1 cut(s) 178
HgaI GACGC 1 cut(s) 123
HhaI GCGC 1 cut(s) 1943
Hin6I GCGC 1 cut(s) 1941
HinP1I GCGC 1 cut(s) 1941
HinfI GANTC 1 cut(s) 60
HpaII CCGG 1 cut(s) 178
HphI GGTGA 5 cut(s) 329, 974, 1227, 1607, 1860
Hpy166II GTNNAC 7 cut(s) 695, 865, 934, 1292, 1498, 1567, 1925
Hpy188I TCNGA 4 cut(s) 404, 444, 455, 1410
Hpy8I GTNNAC 7 cut(s) 695, 865, 934, 1292, 1498, 1567, 1925
Hpy99I CGWCG 1 cut(s) 1933
HpyAV CCTTC 9 cut(s) 39, 281, 341, 344, 412, 857, 1141, 1490, 1774
HpyCH4III ACNGT 4 cut(s) 80, 820, 1453, 1929
HpyCH4IV ACGT 2 cut(s) 1288, 1921
HpyF10VI GCNNNNNNNGC 4 cut(s) 123, 194, 1238, 1871
HpyF3I CTNAG 8 cut(s) 327, 1044, 1209, 1247, 1677, 1842, 1880, 1935
HpySE526I ACGT 2 cut(s) 1288, 1921
HspAI GCGC 1 cut(s) 1941
Kzo9I GATC 5 cut(s) 66, 545, 661, 919, 1552
LmnI GCTCC 4 cut(s) 1202, 1325, 1351, 1835
Lsp1109I GCAGC 7 cut(s) 259, 377, 543, 789, 931, 1422, 1564
LweI GCATC 9 cut(s) 145, 666, 720, 1071, 1168, 1219, 1704, 1801, 1852
MaeI CTAG 7 cut(s) 260, 518, 563, 765, 837, 1398, 1470
MaeII ACGT 2 cut(s) 1288, 1921
MaeIII GTNAC 6 cut(s) 319, 524, 721, 751, 962, 1595
MalI GATC 5 cut(s) 68, 547, 663, 921, 1554
MbiI CCGCTC 2 cut(s) 1200, 1833
MboI GATC 5 cut(s) 66, 545, 661, 919, 1552
MflI RGATCY 1 cut(s) 545
MhlI GDGCHC 1 cut(s) 128
MluCI AATT 5 cut(s) 20, 458, 463, 650, 706
MseI TTAA 9 cut(s) 147, 297, 513, 642, 843, 1331, 1383, 1476, 1948
MslI CAYNNNNRTG 3 cut(s) 572, 821, 1454
MspA1I CMGCKG 3 cut(s) 944, 1360, 1577
MspI CCGG 1 cut(s) 178
MspR9I CCNGG 1 cut(s) 179
MwoI GCNNNNNNNGC 4 cut(s) 123, 194, 1238, 1871
NciI CCSGG 1 cut(s) 179
NdeI CATATG 2 cut(s) 395, 592
NdeII GATC 5 cut(s) 66, 545, 661, 919, 1552
NlaIV GGNNCC 4 cut(s) 315, 380, 547, 1321
NmuCI GTSAC 4 cut(s) 721, 751, 962, 1595
OliI CACNNNNGTG 1 cut(s) 572
PaqCI CACCTGC 2 cut(s) 1246, 1879
PceI AGGCCT 1 cut(s) 433
PfeI GAWTC 1 cut(s) 60
PflFI GACNNNGTC 1 cut(s) 1313
PflMI CCANNNNNTGG 2 cut(s) 947, 1580
PkrI GCNGC 9 cut(s) 249, 392, 558, 804, 946, 1034, 1437, 1579, 1667
Ple19I CGATCG 1 cut(s) 69
PspN4I GGNNCC 4 cut(s) 315, 380, 547, 1321
PstI CTGCAG 2 cut(s) 812, 1445
PstNI CAGNNNCTG 3 cut(s) 755, 947, 1580
PsuI RGATCY 1 cut(s) 545
PsyI GACNNNGTC 1 cut(s) 1313
PvuI CGATCG 1 cut(s) 69
PvuII CAGCTG 2 cut(s) 944, 1577
RsaI GTAC 3 cut(s) 763, 1364, 1396
RsaNI GTAC 3 cut(s) 762, 1363, 1395
RseI CAYNNNNRTG 3 cut(s) 572, 821, 1454
SaqAI TTAA 9 cut(s) 147, 297, 513, 642, 843, 1331, 1383, 1476, 1948
SatI GCNGC 9 cut(s) 248, 391, 557, 803, 945, 1033, 1436, 1578, 1666
Sau3AI GATC 5 cut(s) 66, 545, 661, 919, 1552
ScrFI CCNGG 1 cut(s) 179
SduI GDGCHC 1 cut(s) 128
SfaNI GCATC 9 cut(s) 145, 666, 720, 1071, 1168, 1219, 1704, 1801, 1852
SfcI CTRYAG 3 cut(s) 808, 1355, 1441
SmiMI CAYNNNNRTG 3 cut(s) 572, 821, 1454
SmlI CTYRAG 5 cut(s) 899, 1189, 1339, 1532, 1822
SmoI CTYRAG 5 cut(s) 899, 1189, 1339, 1532, 1822
Sse9I AATT 5 cut(s) 20, 458, 463, 650, 706
SseBI AGGCCT 1 cut(s) 433
SsiI CCGC 7 cut(s) 224, 614, 1033, 1200, 1360, 1666, 1833
SspI AATATT 1 cut(s) 52
SspMI CTAG 7 cut(s) 260, 518, 563, 765, 837, 1398, 1470
StuI AGGCCT 1 cut(s) 433
StyD4I CCNGG 1 cut(s) 177
StyI CCWWGG 4 cut(s) 927, 999, 1560, 1632
TaaI ACNGT 4 cut(s) 80, 820, 1453, 1929
TaiI ACGT 2 cut(s) 1291, 1924
TaqI TCGA 5 cut(s) 660, 869, 1115, 1502, 1748
TaqII GACCGA 4 cut(s) 881, 1210, 1514, 1843
TasI AATT 5 cut(s) 20, 458, 463, 650, 706
TauI GCSGC 2 cut(s) 1035, 1668
TfiI GAWTC 1 cut(s) 60
Tru1I TTAA 9 cut(s) 147, 297, 513, 642, 843, 1331, 1383, 1476, 1948
Tru9I TTAA 9 cut(s) 147, 297, 513, 642, 843, 1331, 1383, 1476, 1948
TscAI CASTG 3 cut(s) 756, 823, 1456
TseFI GTSAC 4 cut(s) 721, 751, 962, 1595
TseI GCWGC 7 cut(s) 247, 390, 556, 802, 944, 1435, 1577
Tsp45I GTSAC 4 cut(s) 721, 751, 962, 1595
TspDTI ATGAA 5 cut(s) 255, 1143, 1170, 1776, 1803
TspGWI ACGGA 2 cut(s) 146, 538
TspRI CASTG 3 cut(s) 756, 823, 1456
Tth111I GACNNNGTC 1 cut(s) 1313
Van91I CCANNNNNTGG 2 cut(s) 947, 1580
XapI RAATTY 1 cut(s) 20
XbaI TCTAGA 3 cut(s) 517, 836, 1469
XmiI GTMKAC 4 cut(s) 864, 933, 1497, 1566
XspI CTAG 7 cut(s) 260, 518, 563, 765, 837, 1398, 1470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.