Rmu_sc0003275.1_g000038

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003275.1
OG0000153
Physical Location & Seq
Forward (+)
104926 .. 107471
2546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003275.1_g000038.1.cds

Sequence Viewer

Length: 1752 bp
atgggtttcactcggacagatggtatttcctgtaggggtatgctctctgatagtctcgggaagaaaggctgtgttggatcccctacgtccacattcttgaggttttgggagttgcagcggtgcgagtttaggaggtttattcaaactggtgggactaggttgcgtccgaaagccactagtgagaacaagagactactccacagtagcactgtcatgggtgtcatgtctagacttaaccttccctatactgaggtatactcgaatggtataaagggtgtggttggttacctcaagggtggtaaaagtggagatgatcctgaagtagagttgccagcttccggagtggagaaaggtagcaagagcactacaaagggtaaagtcagggcttccgaggatggaggggatggcagaaggaaggttcgtcgcttcaaacctaaggtagccaaagatcgtatccctcctccagtagtcaagagtgcttttggtgttaaagtgatactgccatcgagttcggcttgtgaaaaagggaagaagaggaaagctgcttctaccctgagaccaagtggggttattaagaggaaggttgcagatgatgcctcacctgccgtccttaggcggagttcccgcgtggccaacatgaacttttgtaaacgtaaaccgtcgtccaagggtgatgtttatgttgatcttagtgatgggccaagtgtcgacagggatggtagccccctgagtgatgaggagaatgagtctgatacttatgagggaaagacttgcgatggcggtagccaggtggagtcttttgaagatgaggatggtcagggtaatccaactgtagcttcgatgggggaggatagctgcggtgataaccaagacatcggcattagtgatttggcgaaagaatctactgcggatgatagtctttgtgaggatgaccataatgagcggggcggatcagatttgttaggggttggagggacattgtttgagcctcacctccctgagacagcaccgggggaaaacgacgtcactgcgacaatcttggtctgtagagggactccactttgtgcttccccttctcgctctctcgctcctaactcagataaatcgggaagtgtgtcgagggttgatttggagatgcggtttagaaagtttcttgcttgttttgacactgaggatcgcttaagtattaccattgatgacattgcacgcccattgagtggtatcagatcttcatttgagggtgggaaagtcccctcggagttcgtggctccacttactaaatttgctgaaaggtacggtggaggcagtttctcttgcttgtttgtagatggaaagagtgcccgtcagaaacaaaaattggttgaggagttgggttccgtgttgtacagcacggagatcgaagaagtgaaaaatgaggaaactttttttatttggagggatgcatgccgtgacttcatagattgggggcttaaggtcgacttcatgcttgattatttgaagcaggctgctaaggatttctttggttatatgctcagacccagtggatcagaaagtagttgcaggaagatcattcaaatggaggaagctgtatccaagttgagggaaaagctttcgcatcttgaacaacagttaggaaaggcgcgagaagacttatgcaccaagcttggtgatgacattagcttagatagcaagacctgcatattaagatcttcttgggttgctcagagccgtgcaactcatggcttgtattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

583

Amino Acids

63.65

Weight (kDa)

7.4

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 610
AatII GACGTC 1 cut(s) 1026
Acc36I ACCTGC 2 cut(s) 610, 1703
AccB7I CCANNNNNTGG 1 cut(s) 1217
AccBSI CCGCTC 1 cut(s) 943
AccI GTMKAC 3 cut(s) 255, 708, 1476
AccII CGCG 2 cut(s) 627, 1642
AccIII TCCGGA 1 cut(s) 338
AciI CCGC 9 cut(s) 118, 616, 625, 780, 858, 908, 943, 948, 1138
AclWI GGATC 6 cut(s) 72, 85, 308, 958, 1182, 1552
AcoI YGGCCR 1 cut(s) 630
AcsI RAATTY 1 cut(s) 1280
AcuI CTGAAG 1 cut(s) 339
AcyI GRCGYC 1 cut(s) 1023
AdeI CACNNNGTG 1 cut(s) 1064
AfaI GTAC 2 cut(s) 1295, 1385
AfiI CCNNNNNNNGG 4 cut(s) 338, 612, 1217, 1599
AflII CTTAAG 2 cut(s) 1180, 1469
AgsI TTSAA 6 cut(s) 143, 430, 803, 1498, 1574, 1622
AhlI ACTAGT 1 cut(s) 176
AjnI CCWGG 1 cut(s) 786
AjuI GAANNNNNNNTTGG 4 cut(s) 820, 852, 1340, 1372
AluBI AGCT 8 cut(s) 335, 542, 836, 855, 1586, 1609, 1663, 1680
AluI AGCT 8 cut(s) 335, 542, 836, 855, 1586, 1609, 1663, 1680
Alw21I GWGCWC 1 cut(s) 365
Alw26I GTCTC 4 cut(s) 59, 184, 550, 995
AlwI GGATC 6 cut(s) 72, 85, 308, 958, 1182, 1552
Ama87I CYCGRG 1 cut(s) 56
Aor13HI TCCGGA 1 cut(s) 338
AoxI GGCC 2 cut(s) 630, 698
ApeKI GCWGC 4 cut(s) 115, 542, 855, 1505
ApoI RAATTY 1 cut(s) 1280
AspLEI GCGC 1 cut(s) 1642
AspS9I GGNCC 1 cut(s) 698
AsuC2I CCSGG 1 cut(s) 1011
AsuHPI GGTGA 5 cut(s) 591, 683, 872, 983, 1679
AvaI CYCGRG 1 cut(s) 56
AxyI CCTNAGG 2 cut(s) 435, 611
BaeGI GKGCMC 1 cut(s) 1342
BalI TGGCCA 1 cut(s) 632
BamHI GGATCC 1 cut(s) 77
BarI GAAGNNNNNNTAC 2 cut(s) 1213, 1245
BbsI GAAGAC 1 cut(s) 1653
Bbv12I GWGCWC 1 cut(s) 365
BbvI GCAGC 4 cut(s) 127, 529, 842, 1492
BceAI ACGGC 3 cut(s) 590, 1431, 1713
BcgI CGANNNNNNTGC 4 cut(s) 1010, 1044, 1378, 1412
BciT130I CCWGG 1 cut(s) 788
BciVI GTATCC 2 cut(s) 464, 1600
BcnI CCSGG 1 cut(s) 1011
BcoDI GTCTC 4 cut(s) 59, 184, 550, 995
BcuI ACTAGT 1 cut(s) 176
BfaI CTAG 3 cut(s) 156, 177, 228
BfmI CTRYAG 3 cut(s) 31, 831, 1045
BfrI CTTAAG 2 cut(s) 1180, 1469
BfuAI ACCTGC 2 cut(s) 610, 1703
BfuI GTATCC 2 cut(s) 464, 1600
BglII AGATCT 2 cut(s) 1226, 1706
BisI GCNGC 4 cut(s) 116, 543, 856, 1506
BlsI GCNGC 4 cut(s) 117, 544, 857, 1507
Bme1390I CCNGG 2 cut(s) 788, 1011
BmeT110I CYCGRG 1 cut(s) 56
BmgT120I GGNCC 1 cut(s) 698
BmiI GGNNCC 3 cut(s) 79, 1269, 1375
BmrFI CCNGG 2 cut(s) 788, 1011
BmrI ACTGGG 1 cut(s) 1533
BmsI GCATC 4 cut(s) 583, 1125, 1429, 1624
BmuI ACTGGG 1 cut(s) 1533
BpiI GAAGAC 1 cut(s) 1653
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 447
Bpu10I CCTNAGC 1 cut(s) 1509
BpuEI CTTGAG 2 cut(s) 118, 275
BpuMI CCSGG 1 cut(s) 1011
BsaHI GRCGYC 1 cut(s) 1023
BsaI GGTCTC 1 cut(s) 550
BsaJI CCNNGG 4 cut(s) 390, 666, 1010, 1254
BsaWI WCCGGW 1 cut(s) 338
BsaXI ACNNNNNCTCC 4 cut(s) 731, 761, 1124, 1154
Bsc4I CCNNNNNNNGG 4 cut(s) 338, 612, 1217, 1599
Bse1I ACTGG 3 cut(s) 151, 464, 1539
Bse21I CCTNAGG 2 cut(s) 435, 611
Bse3DI GCAATG 1 cut(s) 1200
BseAI TCCGGA 1 cut(s) 338
BseBI CCWGG 1 cut(s) 788
BseDI CCNNGG 4 cut(s) 390, 666, 1010, 1254
BseGI GGATG 7 cut(s) 400, 409, 721, 817, 916, 934, 1444
BseLI CCNNNNNNNGG 4 cut(s) 338, 612, 1217, 1599
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 8 cut(s) 240, 545, 719, 990, 1110, 1161, 1546, 1736
BseNI ACTGG 3 cut(s) 151, 464, 1539
BseRI GAGGAG 3 cut(s) 450, 752, 1379
BseSI GKGCMC 1 cut(s) 1342
BseXI GCAGC 4 cut(s) 127, 529, 842, 1492
Bsh1236I CGCG 2 cut(s) 627, 1642
BshFI GGCC 2 cut(s) 632, 700
BsiHKAI GWGCWC 1 cut(s) 365
BsiHKCI CYCGRG 1 cut(s) 56
BsiSI CCGG 2 cut(s) 339, 1010
BslFI GGGAC 4 cut(s) 166, 988, 1066, 1235
BslI CCNNNNNNNGG 4 cut(s) 338, 612, 1217, 1599
BsmAI GTCTC 4 cut(s) 59, 184, 550, 995
BsmFI GGGAC 4 cut(s) 166, 988, 1066, 1235
BsnI GGCC 2 cut(s) 632, 700
Bso31I GGTCTC 1 cut(s) 550
BsoBI CYCGRG 1 cut(s) 56
Bsp1286I GDGCHC 2 cut(s) 365, 1342
Bsp13I TCCGGA 1 cut(s) 338
Bsp1407I TGTACA 1 cut(s) 1383
BspACI CCGC 9 cut(s) 118, 616, 625, 780, 858, 908, 943, 948, 1138
BspANI GGCC 2 cut(s) 632, 700
BspCNI CTCAG 8 cut(s) 241, 546, 720, 991, 1109, 1162, 1545, 1735
BspEI TCCGGA 1 cut(s) 338
BspFNI CGCG 2 cut(s) 627, 1642
BspLI GGNNCC 3 cut(s) 79, 1269, 1375
BspMI ACCTGC 2 cut(s) 610, 1703
BspPI GGATC 6 cut(s) 72, 85, 308, 958, 1182, 1552
BspTI CTTAAG 2 cut(s) 1180, 1469
BspTNI GGTCTC 1 cut(s) 550
BsrBI CCGCTC 1 cut(s) 943
BsrDI GCAATG 1 cut(s) 1200
BsrGI TGTACA 1 cut(s) 1383
BsrI ACTGG 3 cut(s) 151, 464, 1539
BssECI CCNNGG 4 cut(s) 390, 666, 1010, 1254
BssNAI GTATAC 1 cut(s) 256
BssNI GRCGYC 1 cut(s) 1023
BssT1I CCWWGG 1 cut(s) 666
Bst1107I GTATAC 1 cut(s) 256
Bst2UI CCWGG 1 cut(s) 788
Bst4CI ACNGT 6 cut(s) 203, 211, 660, 832, 1298, 1629
Bst6I CTCTTC 1 cut(s) 527
BstACI GRCGYC 1 cut(s) 1023
BstAFI CTTAAG 2 cut(s) 1180, 1469
BstAPI GCANNNNNTGC 2 cut(s) 593, 1695
BstAUI TGTACA 1 cut(s) 1383
BstC8I GCNNGC 4 cut(s) 333, 1207, 1444, 1503
BstEII GGTNACC 1 cut(s) 284
BstF5I GGATG 7 cut(s) 400, 409, 721, 817, 916, 934, 1444
BstFNI CGCG 2 cut(s) 627, 1642
BstHHI GCGC 1 cut(s) 1642
BstMAI GTCTC 4 cut(s) 59, 184, 550, 995
BstMWI GCNNNNNNNGC 4 cut(s) 593, 602, 1686, 1695
BstNI CCWGG 1 cut(s) 788
BstNSI RCATGY 1 cut(s) 1446
BstPI GGTNACC 1 cut(s) 284
BstSCI CCNGG 2 cut(s) 786, 1009
BstSFI CTRYAG 3 cut(s) 31, 831, 1045
BstSLI GKGCMC 1 cut(s) 1342
BstUI CGCG 2 cut(s) 627, 1642
BstV1I GCAGC 4 cut(s) 127, 529, 842, 1492
BstV2I GAAGAC 1 cut(s) 1653
BstX2I RGATCY 3 cut(s) 77, 1226, 1706
BstYI RGATCY 3 cut(s) 77, 1226, 1706
BstZ17I GTATAC 1 cut(s) 256
Bsu36I CCTNAGG 2 cut(s) 435, 611
BsuI GTATCC 2 cut(s) 464, 1600
BsuRI GGCC 2 cut(s) 632, 700
BtgZI GCGATG 1 cut(s) 789
BtsCI GGATG 7 cut(s) 400, 409, 721, 817, 916, 934, 1444
BtsI GCAGTG 1 cut(s) 1026
BtsIMutI CAGTG 4 cut(s) 207, 1026, 1167, 1546
BveI ACCTGC 2 cut(s) 610, 1703
Cac8I GCNNGC 4 cut(s) 333, 1207, 1444, 1503
CfoI GCGC 1 cut(s) 1642
Cfr13I GGNCC 1 cut(s) 698
CseI GACGC 1 cut(s) 152
Csp6I GTAC 2 cut(s) 1294, 1384
CviAII CATG 6 cut(s) 214, 223, 637, 1443, 1483, 1739
CviQI GTAC 2 cut(s) 1294, 1384
DraIII CACNNNGTG 1 cut(s) 1064
EaeI YGGCCR 1 cut(s) 630
Eam1104I CTCTTC 1 cut(s) 527
EarI CTCTTC 1 cut(s) 527
EciI GGCGGA 2 cut(s) 631, 963
Eco130I CCWWGG 1 cut(s) 666
Eco31I GGTCTC 1 cut(s) 550
Eco57I CTGAAG 1 cut(s) 339
Eco81I CCTNAGG 2 cut(s) 435, 611
Eco88I CYCGRG 1 cut(s) 56
Eco91I GGTNACC 1 cut(s) 284
EcoO65I GGTNACC 1 cut(s) 284
EcoRII CCWGG 1 cut(s) 786
EcoT14I CCWWGG 1 cut(s) 666
EcoT22I ATGCAT 1 cut(s) 1444
ErhI CCWWGG 1 cut(s) 666
FaeI CATG 6 cut(s) 217, 226, 640, 1446, 1486, 1742
FalI AAGNNNNNCTT 6 cut(s) 1463, 1495, 1502, 1534, 1696, 1728
FaqI GGGAC 4 cut(s) 166, 988, 1066, 1235
FatI CATG 6 cut(s) 213, 222, 636, 1442, 1482, 1738
FauI CCCGC 2 cut(s) 632, 936
FblI GTMKAC 3 cut(s) 255, 708, 1476
Fnu4HI GCNGC 4 cut(s) 116, 543, 856, 1506
FokI GGATG 7 cut(s) 407, 416, 728, 824, 923, 941, 1451
Fsp4HI GCNGC 4 cut(s) 116, 543, 856, 1506
FspBI CTAG 3 cut(s) 156, 177, 228
GlaI GCGC 1 cut(s) 1641
GluI GCNGC 4 cut(s) 116, 543, 856, 1506
GsuI CTGGAG 1 cut(s) 447
HaeIII GGCC 2 cut(s) 632, 700
HapII CCGG 2 cut(s) 339, 1010
HgaI GACGC 1 cut(s) 152
HhaI GCGC 1 cut(s) 1642
Hin1I GRCGYC 1 cut(s) 1023
Hin1II CATG 6 cut(s) 217, 226, 640, 1446, 1486, 1742
Hin6I GCGC 1 cut(s) 1640
HinP1I GCGC 1 cut(s) 1640
HincII GTYRAC 2 cut(s) 709, 1477
HindII GTYRAC 2 cut(s) 709, 1477
HindIII AAGCTT 2 cut(s) 1607, 1661
HinfI GANTC 4 cut(s) 746, 794, 899, 1054
HpaII CCGG 2 cut(s) 339, 1010
HphI GGTGA 5 cut(s) 591, 683, 872, 983, 1679
Hpy166II GTNNAC 6 cut(s) 90, 256, 650, 656, 709, 1477
Hpy188III TCNNGA 8 cut(s) 58, 97, 228, 317, 339, 472, 1107, 1619
Hpy8I GTNNAC 6 cut(s) 90, 256, 650, 656, 709, 1477
Hpy99I CGWCG 3 cut(s) 426, 664, 1025
HpyAV CCTTC 5 cut(s) 248, 405, 409, 574, 1083
HpyCH4III ACNGT 6 cut(s) 203, 211, 660, 832, 1298, 1629
HpyCH4IV ACGT 3 cut(s) 86, 652, 1023
HpyCH4V TGCA 8 cut(s) 115, 587, 1205, 1442, 1560, 1656, 1698, 1733
HpyF10VI GCNNNNNNNGC 4 cut(s) 593, 602, 1686, 1695
HpySE526I ACGT 3 cut(s) 86, 652, 1023
Hsp92I GRCGYC 1 cut(s) 1023
Hsp92II CATG 6 cut(s) 217, 226, 640, 1446, 1486, 1742
HspAI GCGC 1 cut(s) 1640
Kpn2I TCCGGA 1 cut(s) 338
LmnI GCTCC 2 cut(s) 1093, 1273
Lsp1109I GCAGC 4 cut(s) 127, 529, 842, 1492
LweI GCATC 4 cut(s) 583, 1125, 1429, 1624
MaeI CTAG 3 cut(s) 156, 177, 228
MaeII ACGT 3 cut(s) 86, 652, 1023
MaeIII GTNAC 3 cut(s) 284, 1024, 1448
MbiI CCGCTC 1 cut(s) 943
MboII GAAGA 9 cut(s) 73, 541, 544, 815, 1221, 1412, 1576, 1658, 1701
MflI RGATCY 3 cut(s) 77, 1226, 1706
MhlI GDGCHC 2 cut(s) 365, 1342
MlsI TGGCCA 1 cut(s) 632
MluCI AATT 2 cut(s) 1280, 1355
MluNI TGGCCA 1 cut(s) 632
MlyI GAGTC 3 cut(s) 755, 803, 1048
MmeI TCCRAC 3 cut(s) 55, 851, 949
Mox20I TGGCCA 1 cut(s) 632
Mph1103I ATGCAT 1 cut(s) 1444
MroI TCCGGA 1 cut(s) 338
MscI TGGCCA 1 cut(s) 632
MseI TTAA 6 cut(s) 234, 489, 573, 1181, 1470, 1703
MslI CAYNNNNRTG 2 cut(s) 212, 1574
Msp20I TGGCCA 1 cut(s) 632
MspA1I CMGCKG 1 cut(s) 118
MspCI CTTAAG 2 cut(s) 1180, 1469
MspI CCGG 2 cut(s) 339, 1010
MspR9I CCNGG 2 cut(s) 788, 1011
MvaI CCWGG 1 cut(s) 788
MvnI CGCG 2 cut(s) 627, 1642
MwoI GCNNNNNNNGC 4 cut(s) 593, 602, 1686, 1695
NciI CCSGG 1 cut(s) 1011
NlaIII CATG 6 cut(s) 217, 226, 640, 1446, 1486, 1742
NlaIV GGNNCC 3 cut(s) 79, 1269, 1375
NmuCI GTSAC 2 cut(s) 1024, 1448
NsiI ATGCAT 1 cut(s) 1444
NspI RCATGY 1 cut(s) 1446
PaeI GCATGC 1 cut(s) 1446
PaqCI CACCTGC 1 cut(s) 610
PfeI GAWTC 1 cut(s) 899
PflMI CCANNNNNTGG 1 cut(s) 1217
PkrI GCNGC 4 cut(s) 117, 544, 857, 1507
PleI GAGTC 3 cut(s) 754, 802, 1048
PpsI GAGTC 3 cut(s) 754, 802, 1048
Psp6I CCWGG 1 cut(s) 786
PspEI GGTNACC 1 cut(s) 284
PspGI CCWGG 1 cut(s) 786
PspN4I GGNNCC 3 cut(s) 79, 1269, 1375
PspPI GGNCC 1 cut(s) 698
PsuI RGATCY 3 cut(s) 77, 1226, 1706
RsaI GTAC 2 cut(s) 1295, 1385
RsaNI GTAC 2 cut(s) 1294, 1384
RseI CAYNNNNRTG 2 cut(s) 212, 1574
SalI GTCGAC 2 cut(s) 707, 1475
SaqAI TTAA 6 cut(s) 234, 489, 573, 1181, 1470, 1703
SatI GCNGC 4 cut(s) 116, 543, 856, 1506
Sau96I GGNCC 1 cut(s) 698
SchI GAGTC 3 cut(s) 755, 803, 1048
ScrFI CCNGG 2 cut(s) 788, 1011
SduI GDGCHC 2 cut(s) 365, 1342
SfaNI GCATC 4 cut(s) 583, 1125, 1429, 1624
SfcI CTRYAG 3 cut(s) 31, 831, 1045
SmiMI CAYNNNNRTG 2 cut(s) 212, 1574
SmlI CTYRAG 4 cut(s) 97, 290, 1180, 1469
SmoI CTYRAG 4 cut(s) 97, 290, 1180, 1469
SpeI ACTAGT 1 cut(s) 176
SphI GCATGC 1 cut(s) 1446
Sse9I AATT 2 cut(s) 1280, 1355
SsiI CCGC 9 cut(s) 118, 616, 625, 780, 858, 908, 943, 948, 1138
SspMI CTAG 3 cut(s) 156, 177, 228
StyD4I CCNGG 2 cut(s) 786, 1009
StyI CCWWGG 1 cut(s) 666
TaaI ACNGT 6 cut(s) 203, 211, 660, 832, 1298, 1629
TaiI ACGT 3 cut(s) 89, 655, 1026
TaqI TCGA 7 cut(s) 260, 506, 708, 839, 1118, 1398, 1476
TasI AATT 2 cut(s) 1280, 1355
TatI WGTACW 1 cut(s) 1383
TfiI GAWTC 1 cut(s) 899
Tru1I TTAA 6 cut(s) 234, 489, 573, 1181, 1470, 1703
Tru9I TTAA 6 cut(s) 234, 489, 573, 1181, 1470, 1703
TscAI CASTG 4 cut(s) 214, 1033, 1174, 1546
TseFI GTSAC 2 cut(s) 1024, 1448
TseI GCWGC 4 cut(s) 115, 542, 855, 1505
Tsp45I GTSAC 2 cut(s) 1024, 1448
TspDTI ATGAA 4 cut(s) 653, 1221, 1444, 1471
TspGWI ACGGA 2 cut(s) 1366, 1406
TspRI CASTG 4 cut(s) 214, 1033, 1174, 1546
Van91I CCANNNNNTGG 1 cut(s) 1217
Vha464I CTTAAG 2 cut(s) 1180, 1469
XapI RAATTY 1 cut(s) 1280
XbaI TCTAGA 1 cut(s) 227
XceI RCATGY 1 cut(s) 1446
XmiI GTMKAC 3 cut(s) 255, 708, 1476
XspI CTAG 3 cut(s) 156, 177, 228
ZraI GACGTC 1 cut(s) 1024
Zsp2I ATGCAT 1 cut(s) 1444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.