Rmu_sc0002012.1_g000012

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002012.1
OG0000153
Physical Location & Seq
Forward (+)
68529 .. 70664
2136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002012.1_g000012.1.cds

Sequence Viewer

Length: 1830 bp
atggcacaagcatctgagtcttctcaacctactgaacttcatgaccaccacttttcactggaagatggtctcattcccgcttccactgcgggggactgtgaaggtagctcagaggaggcatctcatgtgttttctgggtgctttgtttctcctaagttcatattcaagttgcttattgactttgaggcacaacaggaagagcttgaagaggcccttattggagttggagtgaagatttcactgtttatttccggctttcgtgagatttacaaagatgacattttcctttgccatgtggtgcgaagatggagtcccgaaactcacacgttcatatgctcttggggggaagttactccttttctggaagatgtttgcaatattttgcgaatccagatcattggagatggtaatcccttcaagatagagctaaataaggcgcagaagaagaagcttcagattctggaaaagggtgcttataataaagaagtgttccatttttgttactgggtgagacacatttggagctcgactgacggaggcaagtttaagcatggtgcaggtttcgaatctggctgccgggtggaagccatgtttgcttactggctgagcaggttcattttcgcagtttttccctatgagaatgtgcagcaacgagtcttcccgttggccattatgctagcagctgtatctagcttcttccttcaagtgtttgtatgggagagattcgaaggtttggccatggaacccgtaactcctgagtcccttcaccagcttgagggaggtaaaagagacttcaatctagtaggattcccgttgtgttgtagatggttcagaaggaaggctaaaaagggtgcatttaggtctgctattttgtatgacaataggcagttcaatttcagaccatattttactgctcatggcttccaggcatttcctttcttttatccagagggtaattcatcaccgttcttggaatcggatgtgccatcgcatctatcttactgtggacatcttagggattgcatcatgagtttcgcttggatagatggtgtttcttgcaaggggatgctctctgatagtctcgggaaaaagggctgtgttggctcccctacattaacgttcttgagattttgggagttgcagcggtgcaggttcaggaggtttattcagactggtgggactaggttgtgtctgaaagccaatagtgagaacaagagactactccgcagtagtactatcatgggtgtcgtgtctagacttaaccttccctatactaaggtatacttgaatggcatgaagcgtgtggttggtcatctcaagggtggcaaaggtggagatgattctgaagtagggttgccacctgctaggatggagaagggtggcaagagtgcaataaaggataaagtcagggcttccgaggatagaggagaaagtaaaaggaaggttcgtcgcgtcaaacctaaggtggcaaatgatcgcatccctcttccaatagtcaagagtgcctttggtgttaaagtgatattgccatcgaatttggctggtgagaaagggaggaagaggaaagctgcttctaccttgagaccgagtggggttactaagagaaaggctatagatgatgcctcacccgctgtcctttggcggagttctcgggttgccaacatgagcttttctaagcgtaaatcatcgtccaagggtgctgtttatgttgatcttagtgacgcacccagcgatgatgggaagggtagcccccttagtgataacgtcagtgcacatgaggagaatgagtctgatgcttatgagggagagacctgcgatgacagtagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

609

Amino Acids

68.28

Weight (kDa)

9.08

Isoelectric Point (pI)

51.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 477
AarI CACCTGC 1 cut(s) 1369
Acc36I ACCTGC 5 cut(s) 548, 600, 1140, 1369, 1820
AccI GTMKAC 1 cut(s) 1281
AccII CGCG 1 cut(s) 1452
AciI CCGC 6 cut(s) 78, 89, 1144, 1225, 1629, 1642
AclI AACGTT 1 cut(s) 1118
AcoI YGGCCR 2 cut(s) 666, 735
AcsI RAATTY 1 cut(s) 1534
AcuI CTGAAG 2 cut(s) 437, 1365
AfaI GTAC 1 cut(s) 1234
AfiI CCNNNNNNNGG 2 cut(s) 90, 775
AflIII ACRYGT 1 cut(s) 324
AgsI TTSAA 7 cut(s) 166, 206, 418, 704, 796, 892, 1288
AjnI CCWGG 1 cut(s) 924
Alw21I GWGCWC 2 cut(s) 527, 1774
Alw26I GTCTC 7 cut(s) 74, 505, 783, 1085, 1210, 1576, 1802
Alw44I GTGCAC 1 cut(s) 1770
AlwNI CAGNNNCTG 1 cut(s) 460
Ama87I CYCGRG 2 cut(s) 1082, 1650
AoxI GGCC 3 cut(s) 210, 666, 735
ApaLI GTGCAC 1 cut(s) 1770
ApeKI GCWGC 5 cut(s) 573, 646, 680, 1141, 1568
ApoI RAATTY 1 cut(s) 1534
ArsI GACNNNNNNTTYG 2 cut(s) 295, 327
AspLEI GCGC 1 cut(s) 439
AspS9I GGNCC 1 cut(s) 211
AsuC2I CCSGG 1 cut(s) 578
AsuHPI GGTGA 5 cut(s) 520, 758, 954, 1556, 1617
AsuII TTCGAA 2 cut(s) 564, 726
AsuNHI GCTAGC 1 cut(s) 676
AvaI CYCGRG 2 cut(s) 1082, 1650
AxyI CCTNAGG 1 cut(s) 1461
BaeGI GKGCMC 1 cut(s) 1774
BalI TGGCCA 2 cut(s) 668, 737
BanII GRGCYC 1 cut(s) 527
BbsI GAAGAC 2 cut(s) 12, 649
Bbv12I GWGCWC 2 cut(s) 527, 1774
BbvI GCAGC 5 cut(s) 560, 658, 692, 1153, 1555
BccI CCATC 9 cut(s) 59, 300, 398, 819, 994, 1040, 1363, 1537, 1730
BciT130I CCWGG 1 cut(s) 926
BcnI CCSGG 1 cut(s) 578
BcoDI GTCTC 7 cut(s) 74, 505, 783, 1085, 1210, 1576, 1802
BfaI CTAG 6 cut(s) 677, 690, 800, 1182, 1254, 1365
BfmI CTRYAG 1 cut(s) 1611
BfuAI ACCTGC 5 cut(s) 548, 600, 1140, 1369, 1820
BisI GCNGC 5 cut(s) 574, 647, 681, 1142, 1569
BlpI GCTNAGC 1 cut(s) 605
BlsI GCNGC 5 cut(s) 575, 648, 682, 1143, 1570
BmcAI AGTACT 1 cut(s) 1234
Bme1390I CCNGG 2 cut(s) 578, 926
BmeT110I CYCGRG 2 cut(s) 1082, 1650
BmgT120I GGNCC 1 cut(s) 211
BmiI GGNNCC 2 cut(s) 744, 1105
BmrFI CCNGG 2 cut(s) 578, 926
BmrI ACTGGG 1 cut(s) 514
BmsI GCATC 8 cut(s) 20, 128, 1000, 1032, 1056, 1488, 1609, 1783
BmtI GCTAGC 1 cut(s) 680
BmuI ACTGGG 1 cut(s) 514
BpiI GAAGAC 2 cut(s) 12, 649
Bpu1102I GCTNAGC 1 cut(s) 605
Bpu14I TTCGAA 2 cut(s) 564, 726
BpuEI CTTGAG 4 cut(s) 794, 1144, 1301, 1600
BpuMI CCSGG 1 cut(s) 578
BsaBI GATNNNNATC 1 cut(s) 408
BsaI GGTCTC 3 cut(s) 74, 1576, 1802
BsaJI CCNNGG 3 cut(s) 738, 1416, 1692
BsaXI ACNNNNNCTCC 4 cut(s) 213, 243, 1772, 1802
Bsc4I CCNNNNNNNGG 2 cut(s) 90, 775
Bse1I ACTGG 4 cut(s) 63, 509, 605, 1177
Bse21I CCTNAGG 1 cut(s) 1461
Bse8I GATNNNNATC 1 cut(s) 408
BseBI CCWGG 1 cut(s) 926
BseDI CCNNGG 3 cut(s) 738, 1416, 1692
BseGI GGATG 4 cut(s) 985, 1071, 1374, 1479
BseJI GATNNNNATC 1 cut(s) 408
BseLI CCNNNNNNNGG 2 cut(s) 90, 775
BseMII CTCAG 4 cut(s) 6, 123, 596, 747
BseNI ACTGG 4 cut(s) 63, 509, 605, 1177
BseRI GAGGAG 3 cut(s) 128, 1440, 1793
BseSI GKGCMC 1 cut(s) 1774
BseXI GCAGC 5 cut(s) 560, 658, 692, 1153, 1555
BseYI CCCAGC 1 cut(s) 1727
BsgI GTGCAG 3 cut(s) 576, 665, 1168
Bsh1236I CGCG 1 cut(s) 1452
BshFI GGCC 3 cut(s) 212, 668, 737
BsiHKAI GWGCWC 2 cut(s) 527, 1774
BsiHKCI CYCGRG 2 cut(s) 1082, 1650
BsiSI CCGG 2 cut(s) 252, 577
BslFI GGGAC 4 cut(s) 107, 297, 745, 1192
BslI CCNNNNNNNGG 2 cut(s) 90, 775
BsmAI GTCTC 7 cut(s) 74, 505, 783, 1085, 1210, 1576, 1802
BsmFI GGGAC 4 cut(s) 107, 297, 745, 1192
BsnI GGCC 3 cut(s) 212, 668, 737
Bso31I GGTCTC 3 cut(s) 74, 1576, 1802
BsoBI CYCGRG 2 cut(s) 1082, 1650
Bsp119I TTCGAA 2 cut(s) 564, 726
Bsp1286I GDGCHC 2 cut(s) 527, 1774
Bsp143I GATC 3 cut(s) 393, 1474, 1711
Bsp1720I GCTNAGC 1 cut(s) 605
Bsp19I CCATGG 1 cut(s) 738
BspACI CCGC 6 cut(s) 78, 89, 1144, 1225, 1629, 1642
BspANI GGCC 3 cut(s) 212, 668, 737
BspCNI CTCAG 4 cut(s) 7, 122, 597, 748
BspFNI CGCG 1 cut(s) 1452
BspHI TCATGA 2 cut(s) 40, 1026
BspLI GGNNCC 2 cut(s) 744, 1105
BspMI ACCTGC 5 cut(s) 548, 600, 1140, 1369, 1820
BspOI GCTAGC 1 cut(s) 680
BspQI GCTCTTC 1 cut(s) 192
BspT104I TTCGAA 2 cut(s) 564, 726
BspTNI GGTCTC 3 cut(s) 74, 1576, 1802
BsrI ACTGG 4 cut(s) 63, 509, 605, 1177
BssECI CCNNGG 3 cut(s) 738, 1416, 1692
BssMI GATC 3 cut(s) 393, 1474, 1711
BssNAI GTATAC 1 cut(s) 1282
BssT1I CCWWGG 2 cut(s) 738, 1692
Bst1107I GTATAC 1 cut(s) 1282
Bst2UI CCWGG 1 cut(s) 926
Bst4CI ACNGT 5 cut(s) 98, 243, 966, 1004, 1823
Bst6I CTCTTC 4 cut(s) 192, 201, 1491, 1553
BstBI TTCGAA 2 cut(s) 564, 726
BstC8I GCNNGC 1 cut(s) 678
BstDSI CCRYGG 1 cut(s) 738
BstF5I GGATG 4 cut(s) 985, 1071, 1374, 1479
BstFNI CGCG 1 cut(s) 1452
BstHHI GCGC 1 cut(s) 439
BstKTI GATC 3 cut(s) 396, 1477, 1714
BstMAI GTCTC 7 cut(s) 74, 505, 783, 1085, 1210, 1576, 1802
BstMBI GATC 3 cut(s) 393, 1474, 1711
BstMWI GCNNNNNNNGC 4 cut(s) 86, 593, 1101, 1628
BstNI CCWGG 1 cut(s) 926
BstSCI CCNGG 2 cut(s) 576, 924
BstSFI CTRYAG 1 cut(s) 1611
BstSLI GKGCMC 1 cut(s) 1774
BstUI CGCG 1 cut(s) 1452
BstV1I GCAGC 5 cut(s) 560, 658, 692, 1153, 1555
BstV2I GAAGAC 2 cut(s) 12, 649
BstXI CCANNNNNNTGG 1 cut(s) 398
BstZ17I GTATAC 1 cut(s) 1282
Bsu36I CCTNAGG 1 cut(s) 1461
BsuRI GGCC 3 cut(s) 212, 668, 737
BtgI CCRYGG 1 cut(s) 738
BtgZI GCGATG 2 cut(s) 972, 1746
BtsCI GGATG 4 cut(s) 985, 1071, 1374, 1479
BtsI GCAGTG 1 cut(s) 84
BtsIMutI CAGTG 4 cut(s) 56, 84, 239, 1774
BveI ACCTGC 5 cut(s) 548, 600, 1140, 1369, 1820
Cac8I GCNNGC 1 cut(s) 678
CaiI CAGNNNCTG 1 cut(s) 460
CciI TCATGA 2 cut(s) 40, 1026
CfoI GCGC 1 cut(s) 439
Cfr13I GGNCC 1 cut(s) 211
CseI GACGC 2 cut(s) 1441, 1730
Csp6I GTAC 1 cut(s) 1233
CviQI GTAC 1 cut(s) 1233
DpnI GATC 3 cut(s) 395, 1476, 1713
DpnII GATC 3 cut(s) 393, 1474, 1711
EaeI YGGCCR 2 cut(s) 666, 735
Eam1104I CTCTTC 4 cut(s) 192, 201, 1491, 1553
EarI CTCTTC 4 cut(s) 192, 201, 1491, 1553
EciI GGCGGA 1 cut(s) 1657
Ecl136II GAGCTC 1 cut(s) 525
Eco130I CCWWGG 2 cut(s) 738, 1692
Eco24I GRGCYC 1 cut(s) 527
Eco31I GGTCTC 3 cut(s) 74, 1576, 1802
Eco53kI GAGCTC 1 cut(s) 525
Eco57I CTGAAG 2 cut(s) 437, 1365
Eco81I CCTNAGG 1 cut(s) 1461
Eco88I CYCGRG 2 cut(s) 1082, 1650
EcoICRI GAGCTC 1 cut(s) 525
EcoO109I RGGNCCY 1 cut(s) 211
EcoRII CCWGG 1 cut(s) 924
EcoT14I CCWWGG 2 cut(s) 738, 1692
EcoT38I GRGCYC 1 cut(s) 527
ErhI CCWWGG 2 cut(s) 738, 1692
FalI AAGNNNNNCTT 6 cut(s) 198, 230, 1268, 1300, 1490, 1522
FaqI GGGAC 4 cut(s) 107, 297, 745, 1192
FauI CCCGC 3 cut(s) 82, 85, 1636
FauNDI CATATG 1 cut(s) 332
FblI GTMKAC 1 cut(s) 1281
Fnu4HI GCNGC 5 cut(s) 574, 647, 681, 1142, 1569
FokI GGATG 4 cut(s) 992, 1078, 1381, 1466
FriOI GRGCYC 1 cut(s) 527
Fsp4HI GCNGC 5 cut(s) 574, 647, 681, 1142, 1569
FspBI CTAG 6 cut(s) 677, 690, 800, 1182, 1254, 1365
GlaI GCGC 1 cut(s) 438
GluI GCNGC 5 cut(s) 574, 647, 681, 1142, 1569
GsaI CCCAGC 1 cut(s) 1731
HaeIII GGCC 3 cut(s) 212, 668, 737
HapII CCGG 2 cut(s) 252, 577
HgaI GACGC 2 cut(s) 1441, 1730
HhaI GCGC 1 cut(s) 439
Hin6I GCGC 1 cut(s) 437
HinP1I GCGC 1 cut(s) 437
HindIII AAGCTT 1 cut(s) 449
HpaII CCGG 2 cut(s) 252, 577
HphI GGTGA 5 cut(s) 520, 758, 954, 1556, 1617
Hpy166II GTNNAC 3 cut(s) 1007, 1282, 1772
Hpy8I GTNNAC 3 cut(s) 1007, 1282, 1772
Hpy99I CGWCG 1 cut(s) 1452
HpyCH4III ACNGT 5 cut(s) 98, 243, 966, 1004, 1823
HpyCH4IV ACGT 3 cut(s) 326, 1118, 1764
HpyF10VI GCNNNNNNNGC 4 cut(s) 86, 593, 1101, 1628
HpySE526I ACGT 3 cut(s) 326, 1118, 1764
HspAI GCGC 1 cut(s) 437
Kzo9I GATC 3 cut(s) 393, 1474, 1711
LguI GCTCTTC 1 cut(s) 192
LmnI GCTCC 2 cut(s) 522, 1109
Lsp1109I GCAGC 5 cut(s) 560, 658, 692, 1153, 1555
LweI GCATC 8 cut(s) 20, 128, 1000, 1032, 1056, 1488, 1609, 1783
MaeI CTAG 6 cut(s) 677, 690, 800, 1182, 1254, 1365
MaeII ACGT 3 cut(s) 326, 1118, 1764
MaeIII GTNAC 5 cut(s) 349, 500, 748, 1594, 1718
MalI GATC 3 cut(s) 395, 1476, 1713
MboI GATC 3 cut(s) 393, 1474, 1711
MhlI GDGCHC 2 cut(s) 527, 1774
MlsI TGGCCA 2 cut(s) 668, 737
MluCI AATT 3 cut(s) 892, 955, 1534
MluNI TGGCCA 2 cut(s) 668, 737
MlyI GAGTC 5 cut(s) 26, 319, 663, 767, 1796
MmeI TCCRAC 1 cut(s) 205
Mox20I TGGCCA 2 cut(s) 668, 737
MscI TGGCCA 2 cut(s) 668, 737
MseI TTAA 4 cut(s) 546, 1115, 1260, 1515
Msp20I TGGCCA 2 cut(s) 668, 737
MspA1I CMGCKG 3 cut(s) 683, 1144, 1631
MspI CCGG 2 cut(s) 252, 577
MspR9I CCNGG 2 cut(s) 578, 926
MvaI CCWGG 1 cut(s) 926
MvnI CGCG 1 cut(s) 1452
MwoI GCNNNNNNNGC 4 cut(s) 86, 593, 1101, 1628
NciI CCSGG 1 cut(s) 578
NcoI CCATGG 1 cut(s) 738
NdeI CATATG 1 cut(s) 332
NdeII GATC 3 cut(s) 393, 1474, 1711
NheI GCTAGC 1 cut(s) 676
NlaIV GGNNCC 2 cut(s) 744, 1105
NmuCI GTSAC 1 cut(s) 1718
NspV TTCGAA 2 cut(s) 564, 726
PagI TCATGA 2 cut(s) 40, 1026
PaqCI CACCTGC 1 cut(s) 1369
PciSI GCTCTTC 1 cut(s) 192
PcsI WCGNNNNNNNCGW 1 cut(s) 1728
PfeI GAWTC 7 cut(s) 387, 457, 566, 723, 807, 974, 1340
PkrI GCNGC 5 cut(s) 575, 648, 682, 1143, 1570
PleI GAGTC 5 cut(s) 25, 318, 662, 766, 1795
PpsI GAGTC 5 cut(s) 25, 318, 662, 766, 1795
PsiI TTATAA 1 cut(s) 477
Psp124BI GAGCTC 1 cut(s) 527
Psp1406I AACGTT 1 cut(s) 1118
Psp6I CCWGG 1 cut(s) 924
PspFI CCCAGC 1 cut(s) 1727
PspGI CCWGG 1 cut(s) 924
PspN4I GGNNCC 2 cut(s) 744, 1105
PspPI GGNCC 1 cut(s) 211
PstNI CAGNNNCTG 1 cut(s) 460
PvuII CAGCTG 1 cut(s) 683
RsaI GTAC 1 cut(s) 1234
RsaNI GTAC 1 cut(s) 1233
SacI GAGCTC 1 cut(s) 527
SapI GCTCTTC 1 cut(s) 192
SaqAI TTAA 4 cut(s) 546, 1115, 1260, 1515
SatI GCNGC 5 cut(s) 574, 647, 681, 1142, 1569
Sau3AI GATC 3 cut(s) 393, 1474, 1711
Sau96I GGNCC 1 cut(s) 211
ScaI AGTACT 1 cut(s) 1234
SchI GAGTC 5 cut(s) 26, 319, 663, 767, 1796
ScrFI CCNGG 2 cut(s) 578, 926
SduI GDGCHC 2 cut(s) 527, 1774
SfaNI GCATC 8 cut(s) 20, 128, 1000, 1032, 1056, 1488, 1609, 1783
SfcI CTRYAG 1 cut(s) 1611
SfuI TTCGAA 2 cut(s) 564, 726
SmlI CTYRAG 4 cut(s) 773, 1123, 1316, 1579
SmoI CTYRAG 4 cut(s) 773, 1123, 1316, 1579
Sse9I AATT 3 cut(s) 892, 955, 1534
SsiI CCGC 6 cut(s) 78, 89, 1144, 1225, 1629, 1642
SspI AATATT 1 cut(s) 379
SspMI CTAG 6 cut(s) 677, 690, 800, 1182, 1254, 1365
SstI GAGCTC 1 cut(s) 527
StyD4I CCNGG 2 cut(s) 576, 924
StyI CCWWGG 2 cut(s) 738, 1692
TaaI ACNGT 5 cut(s) 98, 243, 966, 1004, 1823
TaiI ACGT 3 cut(s) 329, 1121, 1767
TaqI TCGA 4 cut(s) 527, 564, 726, 1532
TaqII GACCGA 1 cut(s) 1600
TasI AATT 3 cut(s) 892, 955, 1534
TatI WGTACW 1 cut(s) 1232
TfiI GAWTC 7 cut(s) 387, 457, 566, 723, 807, 974, 1340
Tru1I TTAA 4 cut(s) 546, 1115, 1260, 1515
Tru9I TTAA 4 cut(s) 546, 1115, 1260, 1515
TscAI CASTG 4 cut(s) 63, 91, 246, 1774
TseFI GTSAC 1 cut(s) 1718
TseI GCWGC 5 cut(s) 573, 646, 680, 1141, 1568
Tsp45I GTSAC 1 cut(s) 1718
TspDTI ATGAA 6 cut(s) 29, 148, 319, 604, 948, 1310
TspGWI ACGGA 1 cut(s) 549
TspRI CASTG 4 cut(s) 63, 91, 246, 1774
VneI GTGCAC 1 cut(s) 1770
XapI RAATTY 1 cut(s) 1534
XbaI TCTAGA 1 cut(s) 1253
XmiI GTMKAC 1 cut(s) 1281
XspI CTAG 6 cut(s) 677, 690, 800, 1182, 1254, 1365
ZrmI AGTACT 1 cut(s) 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.