Rroxscaffold_6G00388550

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000153
Physical Location & Seq
Forward (+)
1561756 .. 1565796
4041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00388550.1

Sequence Viewer

Length: 1098 bp
ATGCGAGAAGGTAACTCATCGCCATTGTTGGGATCCGTTGAGCTGCTCCTAGCCACTAGTGCGCAGTCCATGCGGCATATGGCGACTTCTTTGACCCTGCAATGGAAATATATTCCCCTCATAGAGTCAAGAGGCGAGTTTGATATCGATCGGGATGTTCCATCGCATCTATATTTCGGTGGACATCTTAGGGATTGCATCATGGAGTCTACTTGGACAGACGGTATTTCTTACAATGGTATGCTTTCTAATAGTCTCGGGAAGAAGGACAGTGTTGGCTCTCCCACATTAACATTCTTGAGATTTTGGGAGTTGCAACGGTGCGAGTTCGGGAGGTTTATTAAGGCTGGTGGTACTAGGCTTAACCTTACTTACATTGAGGTATACTCGAATGGCATAGAACGTGTGGTTGGTCATCTTAAAGGTGGGGATGATTTAGAGAGTGATACGCCGTCTAGTTTTGCTGATGGAAAAGGGAAGAAAAGGAAAGCCACTTCTAGCTCGAGACCGAGTGGAGCTATTAAGCAAAAGGTTACAGTTGATGCCTCACCTGTCCTCGGGCGGAGCTCTCGTGTTGCTAGCATGAGTTTTTCTAAACCTAAACCGTTGGCTAAGGGCCCTGCACATGTTGATCTTAGTGACGCGCCAAGTGATGACATCGAAGGTAGCCCCCTTAGTGATAATGCGGAATCCCTTGGAGATGAGGATGATCGGGTGGCTGGTGCTAGTGCTCTAATGAAGGAATCTGCTGTAAATGTCTATCCTTGTGCAGATAATCGTAACAAGCAGGTGCGCAAAGTTGACATCGGTATAAATGATTTGGTGAAAGAATCTGCTGTTGATGATAGTCTTTGCGAGGATGACCATAATGAGCGGATACGTAGTGGGTTCCGCCGTGCAACGCCTCCGCTTGTTCTCTCGCTCTTTGACACCGAGGATAGCTTGAGTATCACTATTGATGATATTGCGCTCCCATTGAGCGGTATCGATCTTCATTTGAGGGTGGGAAAGTTCCTTCGGTTCATGGTTCCACTCACTAAGTTTACTAAAAGGCCTAGCTTGGTAGAGCTAAGTGTTGTGATCAATGTTGAGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

365

Amino Acids

39.91

Weight (kDa)

5.74

Isoelectric Point (pI)

43.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 778
Acc16I TGCGCA 2 cut(s) 63, 794
Acc36I ACCTGC 1 cut(s) 778
AccBSI CCGCTC 2 cut(s) 874, 981
AccI GTMKAC 2 cut(s) 209, 384
AccII CGCG 1 cut(s) 644
AciI CCGC 7 cut(s) 73, 562, 686, 874, 892, 908, 981
AclWI GGATC 2 cut(s) 27, 40
AfaI GTAC 1 cut(s) 355
AfiI CCNNNNNNNGG 4 cut(s) 29, 102, 557, 980
AflIII ACRYGT 2 cut(s) 403, 625
AhlI ACTAGT 1 cut(s) 56
AjuI GAANNNNNNNTTGG 2 cut(s) 393, 425
AluBI AGCT 7 cut(s) 43, 501, 518, 567, 942, 1059, 1069
AluI AGCT 7 cut(s) 43, 501, 518, 567, 942, 1059, 1069
Alw21I GWGCWC 2 cut(s) 569, 733
Alw26I GTCTC 2 cut(s) 260, 499
AlwI GGATC 2 cut(s) 27, 40
Ama87I CYCGRG 3 cut(s) 257, 502, 557
AoxI GGCC 2 cut(s) 616, 1052
ApaI GGGCCC 1 cut(s) 620
ApeKI GCWGC 1 cut(s) 43
AspLEI GCGC 4 cut(s) 64, 646, 795, 970
AspS9I GGNCC 2 cut(s) 616, 617
AsuHPI GGTGA 2 cut(s) 540, 835
AsuNHI GCTAGC 1 cut(s) 578
AvaI CYCGRG 3 cut(s) 257, 502, 557
BaeGI GKGCMC 1 cut(s) 620
BamHI GGATCC 1 cut(s) 32
BanII GRGCYC 2 cut(s) 569, 620
BauI CACGAG 1 cut(s) 570
Bbv12I GWGCWC 2 cut(s) 569, 733
BbvI GCAGC 1 cut(s) 30
BccI CCATC 2 cut(s) 169, 461
BceAI ACGGC 2 cut(s) 436, 879
BciVI GTATCC 1 cut(s) 870
BclI TGATCA 1 cut(s) 1080
BcoDI GTCTC 2 cut(s) 260, 499
BcuI ACTAGT 1 cut(s) 56
BfaI CTAG 8 cut(s) 50, 57, 357, 456, 498, 579, 726, 1056
BfuAI ACCTGC 1 cut(s) 778
BfuI GTATCC 1 cut(s) 870
BisI GCNGC 2 cut(s) 44, 74
BlsI GCNGC 2 cut(s) 45, 75
BmeT110I CYCGRG 3 cut(s) 257, 502, 557
BmgT120I GGNCC 2 cut(s) 616, 617
BmiI GGNNCC 4 cut(s) 34, 618, 890, 1029
BmsI GCATC 3 cut(s) 175, 207, 532
BmtI GCTAGC 1 cut(s) 582
BplI GAGNNNNNCTC 2 cut(s) 371, 403
Bpu10I CCTNAGC 1 cut(s) 612
BpuEI CTTGAG 2 cut(s) 319, 964
Bsa29I ATCGAT 2 cut(s) 147, 987
BsaAI YACGTR 1 cut(s) 881
BsaBI GATNNNNATC 1 cut(s) 147
BsaI GGTCTC 1 cut(s) 499
BsaJI CCNNGG 3 cut(s) 556, 694, 933
BsaXI ACNNNNNCTCC 2 cut(s) 556, 586
Bsc4I CCNNNNNNNGG 4 cut(s) 29, 102, 557, 980
Bse3DI GCAATG 1 cut(s) 107
Bse8I GATNNNNATC 1 cut(s) 147
BseCI ATCGAT 2 cut(s) 147, 987
BseDI CCNNGG 3 cut(s) 556, 694, 933
BseGI GGATG 4 cut(s) 160, 436, 712, 865
BseJI GATNNNNATC 1 cut(s) 147
BseLI CCNNNNNNNGG 4 cut(s) 29, 102, 557, 980
BseMI GCAATG 1 cut(s) 107
BseSI GKGCMC 1 cut(s) 620
BseXI GCAGC 1 cut(s) 30
BsgI GTGCAG 2 cut(s) 606, 789
Bsh1236I CGCG 1 cut(s) 644
Bsh1285I CGRYCG 1 cut(s) 151
BshFI GGCC 2 cut(s) 618, 1054
BshVI ATCGAT 2 cut(s) 147, 987
BsiEI CGRYCG 1 cut(s) 151
BsiHKAI GWGCWC 2 cut(s) 569, 733
BsiHKCI CYCGRG 3 cut(s) 257, 502, 557
BslI CCNNNNNNNGG 4 cut(s) 29, 102, 557, 980
BsmAI GTCTC 2 cut(s) 260, 499
BsnI GGCC 2 cut(s) 618, 1054
Bso31I GGTCTC 1 cut(s) 499
BsoBI CYCGRG 3 cut(s) 257, 502, 557
Bsp120I GGGCCC 1 cut(s) 616
Bsp1286I GDGCHC 3 cut(s) 569, 620, 733
Bsp143I GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
BspACI CCGC 7 cut(s) 73, 562, 686, 874, 892, 908, 981
BspANI GGCC 2 cut(s) 618, 1054
BspDI ATCGAT 2 cut(s) 147, 987
BspFNI CGCG 1 cut(s) 644
BspLI GGNNCC 4 cut(s) 34, 618, 890, 1029
BspMI ACCTGC 1 cut(s) 778
BspOI GCTAGC 1 cut(s) 582
BspPI GGATC 2 cut(s) 27, 40
BspTNI GGTCTC 1 cut(s) 499
BsrBI CCGCTC 2 cut(s) 874, 981
BsrDI GCAATG 1 cut(s) 107
BssECI CCNNGG 3 cut(s) 556, 694, 933
BssMI GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
BssNAI GTATAC 1 cut(s) 385
BssSI CACGAG 1 cut(s) 570
BssT1I CCWWGG 1 cut(s) 694
Bst1107I GTATAC 1 cut(s) 385
Bst2BI CACGAG 1 cut(s) 570
Bst4CI ACNGT 5 cut(s) 224, 272, 321, 538, 606
BstAPI GCANNNNNTGC 1 cut(s) 70
BstBAI YACGTR 1 cut(s) 881
BstC8I GCNNGC 1 cut(s) 580
BstDEI CTNAG 6 cut(s) 188, 612, 635, 674, 1038, 1070
BstF5I GGATG 4 cut(s) 160, 436, 712, 865
BstFNI CGCG 1 cut(s) 644
BstHHI GCGC 4 cut(s) 64, 646, 795, 970
BstKTI GATC 6 cut(s) 35, 151, 634, 712, 991, 1083
BstMAI GTCTC 2 cut(s) 260, 499
BstMBI GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
BstMCI CGRYCG 1 cut(s) 151
BstMWI GCNNNNNNNGC 2 cut(s) 59, 70
BstNSI RCATGY 1 cut(s) 629
BstSLI GKGCMC 1 cut(s) 620
BstSNI TACGTA 1 cut(s) 881
BstUI CGCG 1 cut(s) 644
BstV1I GCAGC 1 cut(s) 30
BstX2I RGATCY 1 cut(s) 32
BstYI RGATCY 1 cut(s) 32
BstZ17I GTATAC 1 cut(s) 385
Bsu15I ATCGAT 2 cut(s) 147, 987
BsuI GTATCC 1 cut(s) 870
BsuRI GGCC 2 cut(s) 618, 1054
BsuTUI ATCGAT 2 cut(s) 147, 987
BtgZI GCGATG 2 cut(s) 3, 147
BtsCI GGATG 4 cut(s) 160, 436, 712, 865
BtsIMutI CAGTG 1 cut(s) 277
BveI ACCTGC 1 cut(s) 778
Cac8I GCNNGC 1 cut(s) 580
CfoI GCGC 4 cut(s) 64, 646, 795, 970
Cfr13I GGNCC 2 cut(s) 616, 617
ClaI ATCGAT 2 cut(s) 147, 987
CseI GACGC 1 cut(s) 650
Csp6I GTAC 1 cut(s) 354
CviAII CATG 5 cut(s) 70, 202, 583, 626, 1024
CviQI GTAC 1 cut(s) 354
DdeI CTNAG 6 cut(s) 188, 612, 635, 674, 1038, 1070
DpnI GATC 6 cut(s) 34, 150, 633, 711, 990, 1082
DpnII GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
EciI GGCGGA 2 cut(s) 577, 881
Ecl136II GAGCTC 1 cut(s) 567
Eco105I TACGTA 1 cut(s) 881
Eco130I CCWWGG 1 cut(s) 694
Eco147I AGGCCT 1 cut(s) 1054
Eco24I GRGCYC 2 cut(s) 569, 620
Eco31I GGTCTC 1 cut(s) 499
Eco32I GATATC 1 cut(s) 145
Eco53kI GAGCTC 1 cut(s) 567
Eco88I CYCGRG 3 cut(s) 257, 502, 557
EcoICRI GAGCTC 1 cut(s) 567
EcoO109I RGGNCCY 2 cut(s) 616, 617
EcoRV GATATC 1 cut(s) 145
EcoT14I CCWWGG 1 cut(s) 694
EcoT38I GRGCYC 2 cut(s) 569, 620
ErhI CCWWGG 1 cut(s) 694
FaeI CATG 5 cut(s) 73, 205, 586, 629, 1027
FatI CATG 5 cut(s) 69, 201, 582, 625, 1023
FauNDI CATATG 1 cut(s) 78
FbaI TGATCA 1 cut(s) 1080
FblI GTMKAC 2 cut(s) 209, 384
Fnu4HI GCNGC 2 cut(s) 44, 74
FokI GGATG 4 cut(s) 167, 443, 719, 872
FriOI GRGCYC 2 cut(s) 569, 620
Fsp4HI GCNGC 2 cut(s) 44, 74
FspBI CTAG 8 cut(s) 50, 57, 357, 456, 498, 579, 726, 1056
FspI TGCGCA 2 cut(s) 63, 794
GlaI GCGC 4 cut(s) 63, 645, 794, 969
GluI GCNGC 2 cut(s) 44, 74
HaeIII GGCC 2 cut(s) 618, 1054
HgaI GACGC 1 cut(s) 650
HhaI GCGC 4 cut(s) 64, 646, 795, 970
Hin1II CATG 5 cut(s) 73, 205, 586, 629, 1027
Hin6I GCGC 4 cut(s) 62, 644, 793, 968
HinP1I GCGC 4 cut(s) 62, 644, 793, 968
HincII GTYRAC 1 cut(s) 802
HindII GTYRAC 1 cut(s) 802
HinfI GANTC 5 cut(s) 125, 206, 689, 743, 830
HphI GGTGA 2 cut(s) 540, 835
Hpy166II GTNNAC 5 cut(s) 182, 210, 385, 802, 1044
Hpy188III TCNNGA 6 cut(s) 129, 152, 259, 298, 331, 504
Hpy8I GTNNAC 5 cut(s) 182, 210, 385, 802, 1044
HpyAV CCTTC 4 cut(s) 259, 656, 733, 1025
HpyCH4III ACNGT 5 cut(s) 224, 272, 321, 538, 606
HpyCH4IV ACGT 2 cut(s) 403, 880
HpyCH4V TGCA 6 cut(s) 100, 198, 316, 623, 770, 899
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 70
HpyF3I CTNAG 6 cut(s) 188, 612, 635, 674, 1038, 1070
HpySE526I ACGT 2 cut(s) 403, 880
Hsp92II CATG 5 cut(s) 73, 205, 586, 629, 1027
HspAI GCGC 4 cut(s) 62, 644, 793, 968
Ksp22I TGATCA 1 cut(s) 1080
Kzo9I GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
LmnI GCTCC 4 cut(s) 51, 515, 564, 975
LpnPI CCDG 6 cut(s) 110, 333, 564, 633, 705, 773
Lsp1109I GCAGC 1 cut(s) 30
LweI GCATC 3 cut(s) 175, 207, 532
MaeI CTAG 8 cut(s) 50, 57, 357, 456, 498, 579, 726, 1056
MaeII ACGT 2 cut(s) 403, 880
MaeIII GTNAC 4 cut(s) 11, 532, 638, 779
MalI GATC 6 cut(s) 34, 150, 633, 711, 990, 1082
MbiI CCGCTC 2 cut(s) 874, 981
MboI GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
MboII GAAGA 3 cut(s) 274, 490, 983
MflI RGATCY 1 cut(s) 32
MhlI GDGCHC 3 cut(s) 569, 620, 733
MlyI GAGTC 2 cut(s) 134, 215
MseI TTAA 5 cut(s) 290, 342, 363, 420, 522
MvnI CGCG 1 cut(s) 644
MwoI GCNNNNNNNGC 2 cut(s) 59, 70
NdeI CATATG 1 cut(s) 78
NdeII GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
NheI GCTAGC 1 cut(s) 578
NlaIII CATG 5 cut(s) 73, 205, 586, 629, 1027
NlaIV GGNNCC 4 cut(s) 34, 618, 890, 1029
NmuCI GTSAC 1 cut(s) 638
NsbI TGCGCA 2 cut(s) 63, 794
NspI RCATGY 1 cut(s) 629
PaeR7I CTCGAG 1 cut(s) 502
PaqCI CACCTGC 1 cut(s) 778
PceI AGGCCT 1 cut(s) 1054
PciI ACATGT 1 cut(s) 625
PfeI GAWTC 3 cut(s) 689, 743, 830
PkrI GCNGC 2 cut(s) 45, 75
Ple19I CGATCG 1 cut(s) 151
PleI GAGTC 2 cut(s) 133, 214
PpsI GAGTC 2 cut(s) 133, 214
Ppu21I YACGTR 1 cut(s) 881
PscI ACATGT 1 cut(s) 625
Psp124BI GAGCTC 1 cut(s) 569
PspN4I GGNNCC 4 cut(s) 34, 618, 890, 1029
PspOMI GGGCCC 1 cut(s) 616
PspPI GGNCC 2 cut(s) 616, 617
PsuI RGATCY 1 cut(s) 32
PvuI CGATCG 1 cut(s) 151
RsaI GTAC 1 cut(s) 355
RsaNI GTAC 1 cut(s) 354
SacI GAGCTC 1 cut(s) 569
SaqAI TTAA 5 cut(s) 290, 342, 363, 420, 522
SatI GCNGC 2 cut(s) 44, 74
Sau3AI GATC 6 cut(s) 32, 148, 631, 709, 988, 1080
Sau96I GGNCC 2 cut(s) 616, 617
SchI GAGTC 2 cut(s) 134, 215
SduI GDGCHC 3 cut(s) 569, 620, 733
SfaNI GCATC 3 cut(s) 175, 207, 532
Sfr274I CTCGAG 1 cut(s) 502
SlaI CTCGAG 1 cut(s) 502
SmlI CTYRAG 3 cut(s) 298, 502, 943
SmoI CTYRAG 3 cut(s) 298, 502, 943
SnaBI TACGTA 1 cut(s) 881
SpeI ACTAGT 1 cut(s) 56
SseBI AGGCCT 1 cut(s) 1054
SsiI CCGC 7 cut(s) 73, 562, 686, 874, 892, 908, 981
SspMI CTAG 8 cut(s) 50, 57, 357, 456, 498, 579, 726, 1056
SstI GAGCTC 1 cut(s) 569
StuI AGGCCT 1 cut(s) 1054
StyI CCWWGG 1 cut(s) 694
TaaI ACNGT 5 cut(s) 224, 272, 321, 538, 606
TaiI ACGT 2 cut(s) 406, 883
TaqI TCGA 5 cut(s) 147, 389, 503, 660, 987
TaqII GACCGA 1 cut(s) 523
TauI GCSGC 1 cut(s) 76
TfiI GAWTC 3 cut(s) 689, 743, 830
Tru1I TTAA 5 cut(s) 290, 342, 363, 420, 522
Tru9I TTAA 5 cut(s) 290, 342, 363, 420, 522
TscAI CASTG 1 cut(s) 277
TseFI GTSAC 1 cut(s) 638
TseI GCWGC 1 cut(s) 43
Tsp45I GTSAC 1 cut(s) 638
TspDTI ATGAA 3 cut(s) 752, 983, 1012
TspGWI ACGGA 1 cut(s) 25
TspRI CASTG 1 cut(s) 277
XceI RCATGY 1 cut(s) 629
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XhoI CTCGAG 1 cut(s) 502
XmiI GTMKAC 2 cut(s) 209, 384
XspI CTAG 8 cut(s) 50, 57, 357, 456, 498, 579, 726, 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.