Rw3G020700

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000153
Physical Location & Seq
Forward (+)
24578408 .. 24580124
1717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G020700.1

Sequence Viewer

Length: 1290 bp
ATGAGTCTCTCTCTAGAATTGTACAACAATGACAAGGAAGGCAGTAAGCAAGCACATACTGAATATTTGCCGCCGGTACTTCCTCTGCTGTGTTGTTGGTTCAAAAGGAGACAAGATAAGACTGTGTTTACCCCGAGCATGTTAGATGATGTAAATAATTTCATCTGGCAGCCCTATCTCCAGCCTTCTGAGTTTGAGACCTTTTCATTTTCTGGTAGAGAAGAGCAGTGTGCTACAGCTCTCGGTCGGGTTAAACTCTACATGACTGTTTGCCTAAATTTTATCCCATCCATCAGTGAGGATAAGGAAGACCTGGATATTTTCCCTGTTGTTTATTCTCATGATAGAGTGATGCGGCAACTTGGTTGCCTTCAGGATGTTCCCTCGCCTCCACCTCGCTCTCTTAACTGTAAGATCACAAGTTTTTCTCATATGGAGCGTAGATGTGTACTTGATTTTTCTGGCAGAATTGCAGACTTCCCATCTCAGTTGCCAGGGAACGCTACAAATGCTAACGCTTCCTCTGCTTATAGTTGTTATTGGAAGGGGGTGTTGTGCAGGTTCAGGCTTTTTGTGGAAGCCGGCAGTCCTCAGCTAGAGTTGGGACCTATTACCAGCAGCAGGTTGGCTAGCCCCAAGGGTGTACTGACTTATGCTGAAAAGCATAACCTCACCTATACTGAAGTGTCCAGCGATGGTACTAGAAAGATTGTCGGCTATTTAAAGGGTTTTGAAGCTAAGAGGGTGAAGAGAGAGGGAAAGAAGTGCGATAAGAAGATTCGTGATAAGGGTGATGCAAGGGAACACAACACTCAGAAGCCTATTTGGCGTTTCAAGCCCAAGGTGGATTTTGATAAGTTTATGCATACAACCCAACACGGAGTCAAATTGATGATTCCCCCAAGCATGCCGCTTCAAAAGAACAAGGAGGTAAAGAAGAAAAGATCTTCAACATCCCGAGCAAGTGGTACTTCTCATGCAAAGCAAGCGAATGCTAAAAGTTTTGAAGTGAAGAAAGGGGTGAAGAGGGAGGCCGGTGCAGATTTTGATGTCCCTCTTCGTCGAAGCAACCTTGTGAAGTCTAAGAGTTCTCCTTCTCCTCGTGGTCCTCCAGCTTATCTTGAGTTATCTGAATCTGATCTCGGAGAGGGTTCTCAAGGGGGTCCAACTGATTCTTCTAAAGAGGATCATACTAATTTTTCAAAAGGGGCATCTGATCATCTGCCTGAAGTGCCTCCCATGATTAACCAAGATGGTGACGATCAGAGGTTATCGAAGATGAAGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

429

Amino Acids

48.2

Weight (kDa)

9.24

Isoelectric Point (pI)

51.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 549, 612
AciI CCGC 3 cut(s) 71, 355, 911
AclWI GGATC 1 cut(s) 1194
AcsI RAATTY 1 cut(s) 277
AcuI CTGAAG 3 cut(s) 356, 702, 1248
AfaI GTAC 6 cut(s) 23, 78, 450, 645, 700, 970
AfiI CCNNNNNNNGG 1 cut(s) 621
AgsI TTSAA 7 cut(s) 103, 734, 835, 917, 951, 1007, 1203
AjnI CCWGG 2 cut(s) 312, 493
AjuI GAANNNNNNNTTGG 2 cut(s) 1159, 1191
AluBI AGCT 4 cut(s) 239, 595, 737, 1115
AluI AGCT 4 cut(s) 239, 595, 737, 1115
Alw26I GTCTC 3 cut(s) 11, 103, 191
AlwI GGATC 1 cut(s) 1194
Ama87I CYCGRG 2 cut(s) 133, 957
AoxI GGCC 1 cut(s) 1032
ApeKI GCWGC 2 cut(s) 169, 618
ApoI RAATTY 1 cut(s) 277
AspS9I GGNCC 3 cut(s) 605, 1106, 1163
AsuHPI GGTGA 5 cut(s) 664, 757, 803, 1033, 1268
AsuNHI GCTAGC 1 cut(s) 629
AvaI CYCGRG 2 cut(s) 133, 957
AvaII GGWCC 3 cut(s) 605, 1106, 1163
BauI CACGAG 1 cut(s) 1101
BbsI GAAGAC 1 cut(s) 315
BbvCI CCTCAGC 1 cut(s) 591
BbvI GCAGC 2 cut(s) 181, 630
BccI CCATC 5 cut(s) 295, 299, 490, 689, 1247
BciT130I CCWGG 2 cut(s) 314, 495
BclI TGATCA 1 cut(s) 1216
BcoDI GTCTC 3 cut(s) 11, 103, 191
BfaI CTAG 4 cut(s) 14, 596, 630, 702
BfmI CTRYAG 1 cut(s) 234
BfuAI ACCTGC 2 cut(s) 549, 612
BglI GCCNNNNNGGC 1 cut(s) 826
BglII AGATCT 1 cut(s) 944
BisI GCNGC 5 cut(s) 71, 170, 356, 619, 911
BlsI GCNGC 5 cut(s) 72, 171, 357, 620, 912
Bme1390I CCNGG 2 cut(s) 314, 495
Bme18I GGWCC 3 cut(s) 605, 1106, 1163
BmeT110I CYCGRG 2 cut(s) 133, 957
BmgT120I GGNCC 3 cut(s) 605, 1106, 1163
BmiI GGNNCC 2 cut(s) 606, 1164
BmrFI CCNGG 2 cut(s) 314, 495
BmsI GCATC 3 cut(s) 342, 784, 1220
BmtI GCTAGC 1 cut(s) 633
BpiI GAAGAC 1 cut(s) 315
BplI GAGNNNNNCTC 1 cut(s) 27
BpmI CTGGAG 2 cut(s) 164, 1095
Bpu10I CCTNAGC 1 cut(s) 591
BpuEI CTTGAG 2 cut(s) 1140, 1142
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 3 cut(s) 494, 636, 840
Bsc4I CCNNNNNNNGG 1 cut(s) 621
Bse118I RCCGGY 3 cut(s) 73, 581, 1034
BseBI CCWGG 2 cut(s) 314, 495
BseDI CCNNGG 3 cut(s) 494, 636, 840
BseGI GGATG 3 cut(s) 287, 382, 953
BseLI CCNNNNNNNGG 1 cut(s) 621
BseMII CTCAG 4 cut(s) 180, 500, 605, 827
BseRI GAGGAG 1 cut(s) 1089
BseXI GCAGC 2 cut(s) 181, 630
BsgI GTGCAG 2 cut(s) 577, 1059
Bsh1285I CGRYCG 1 cut(s) 247
BshFI GGCC 1 cut(s) 1034
BsiEI CGRYCG 1 cut(s) 247
BsiHKCI CYCGRG 2 cut(s) 133, 957
BsiSI CCGG 3 cut(s) 74, 582, 1035
BslFI GGGAC 2 cut(s) 618, 1037
BslI CCNNNNNNNGG 1 cut(s) 621
BsmAI GTCTC 3 cut(s) 11, 103, 191
BsmFI GGGAC 2 cut(s) 618, 1037
BsmI GAATGC 1 cut(s) 997
BsnI GGCC 1 cut(s) 1034
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 2 cut(s) 133, 957
Bsp1407I TGTACA 1 cut(s) 21
Bsp143I GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
BspACI CCGC 3 cut(s) 71, 355, 911
BspANI GGCC 1 cut(s) 1034
BspCNI CTCAG 4 cut(s) 181, 499, 604, 826
BspHI TCATGA 1 cut(s) 340
BspLI GGNNCC 2 cut(s) 606, 1164
BspMI ACCTGC 2 cut(s) 549, 612
BspOI GCTAGC 1 cut(s) 633
BspPI GGATC 1 cut(s) 1194
BspQI GCTCTTC 1 cut(s) 216
BspTNI GGTCTC 1 cut(s) 191
BsrFI RCCGGY 3 cut(s) 73, 581, 1034
BsrGI TGTACA 1 cut(s) 21
BssAI RCCGGY 3 cut(s) 73, 581, 1034
BssECI CCNNGG 3 cut(s) 494, 636, 840
BssMI GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
BssSI CACGAG 1 cut(s) 1101
BssT1I CCWWGG 2 cut(s) 636, 840
Bst2BI CACGAG 1 cut(s) 1101
Bst2UI CCWGG 2 cut(s) 314, 495
Bst4CI ACNGT 3 cut(s) 124, 268, 410
Bst6I CTCTTC 4 cut(s) 216, 743, 1019, 1062
BstAUI TGTACA 1 cut(s) 21
BstC8I GCNNGC 5 cut(s) 51, 583, 631, 908, 987
BstDEI CTNAG 6 cut(s) 189, 486, 591, 738, 813, 1083
BstF5I GGATG 3 cut(s) 287, 382, 953
BstKTI GATC 6 cut(s) 417, 947, 1141, 1189, 1219, 1264
BstMAI GTCTC 3 cut(s) 11, 103, 191
BstMBI GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
BstMCI CGRYCG 1 cut(s) 247
BstMWI GCNNNNNNNGC 6 cut(s) 509, 524, 826, 835, 986, 1231
BstNI CCWGG 2 cut(s) 314, 495
BstNSI RCATGY 2 cut(s) 142, 910
BstSCI CCNGG 2 cut(s) 312, 493
BstSFI CTRYAG 1 cut(s) 234
BstV1I GCAGC 2 cut(s) 181, 630
BstV2I GAAGAC 1 cut(s) 315
BstX2I RGATCY 1 cut(s) 944
BstYI RGATCY 1 cut(s) 944
BsuRI GGCC 1 cut(s) 1034
BtgZI GCGATG 1 cut(s) 708
BtsCI GGATG 3 cut(s) 287, 382, 953
BtsI GCAGTG 1 cut(s) 233
BtsIMutI CAGTG 2 cut(s) 233, 301
BveI ACCTGC 2 cut(s) 549, 612
Cac8I GCNNGC 5 cut(s) 51, 583, 631, 908, 987
CciI TCATGA 1 cut(s) 340
Cfr10I RCCGGY 3 cut(s) 73, 581, 1034
Cfr13I GGNCC 3 cut(s) 605, 1106, 1163
Csp6I GTAC 6 cut(s) 22, 77, 449, 644, 699, 969
CviAII CATG 7 cut(s) 139, 262, 341, 907, 977, 1240, 1287
CviQI GTAC 6 cut(s) 22, 77, 449, 644, 699, 969
DdeI CTNAG 6 cut(s) 189, 486, 591, 738, 813, 1083
DpnI GATC 6 cut(s) 416, 946, 1140, 1188, 1218, 1263
DpnII GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
DraI TTTAAA 1 cut(s) 723
Eam1104I CTCTTC 4 cut(s) 216, 743, 1019, 1062
EarI CTCTTC 4 cut(s) 216, 743, 1019, 1062
Eco130I CCWWGG 2 cut(s) 636, 840
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 3 cut(s) 605, 1106, 1163
Eco57I CTGAAG 3 cut(s) 356, 702, 1248
Eco88I CYCGRG 2 cut(s) 133, 957
EcoO109I RGGNCCY 1 cut(s) 605
EcoRII CCWGG 2 cut(s) 312, 493
EcoT14I CCWWGG 2 cut(s) 636, 840
EcoT22I ATGCAT 1 cut(s) 867
ErhI CCWWGG 2 cut(s) 636, 840
FaeI CATG 7 cut(s) 142, 265, 344, 910, 980, 1243, 1290
FalI AAGNNNNNCTT 2 cut(s) 955, 987
FaqI GGGAC 2 cut(s) 618, 1037
FatI CATG 7 cut(s) 138, 261, 340, 906, 976, 1239, 1286
FauNDI CATATG 1 cut(s) 432
FbaI TGATCA 1 cut(s) 1216
Fnu4HI GCNGC 5 cut(s) 71, 170, 356, 619, 911
FokI GGATG 3 cut(s) 274, 389, 940
Fsp4HI GCNGC 5 cut(s) 71, 170, 356, 619, 911
FspBI CTAG 4 cut(s) 14, 596, 630, 702
GluI GCNGC 5 cut(s) 71, 170, 356, 619, 911
GsuI CTGGAG 2 cut(s) 164, 1095
HaeIII GGCC 1 cut(s) 1034
HapII CCGG 3 cut(s) 74, 582, 1035
Hin1II CATG 7 cut(s) 142, 265, 344, 910, 980, 1243, 1290
HinfI GANTC 6 cut(s) 4, 778, 882, 895, 1133, 1172
HpaII CCGG 3 cut(s) 74, 582, 1035
HphI GGTGA 5 cut(s) 664, 757, 803, 1033, 1268
Hpy166II GTNNAC 3 cut(s) 129, 449, 644
Hpy188I TCNGA 7 cut(s) 190, 816, 1132, 1138, 1145, 1216, 1266
Hpy188III TCNNGA 6 cut(s) 14, 341, 374, 782, 957, 1121
Hpy8I GTNNAC 3 cut(s) 129, 449, 644
Hpy99I CGWCG 1 cut(s) 1065
HpyAV CCTTC 6 cut(s) 32, 195, 380, 538, 1104, 1276
HpyCH4III ACNGT 3 cut(s) 124, 268, 410
HpyCH4V TGCA 6 cut(s) 473, 558, 797, 865, 980, 1040
HpyF10VI GCNNNNNNNGC 6 cut(s) 509, 524, 826, 835, 986, 1231
HpyF3I CTNAG 6 cut(s) 189, 486, 591, 738, 813, 1083
Hsp92II CATG 7 cut(s) 142, 265, 344, 910, 980, 1243, 1290
KroI GCCGGC 1 cut(s) 581
KroNI GCCGGC 1 cut(s) 583
Ksp22I TGATCA 1 cut(s) 1216
Kzo9I GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
LguI GCTCTTC 1 cut(s) 216
LmnI GCTCC 1 cut(s) 436
Lsp1109I GCAGC 2 cut(s) 181, 630
LweI GCATC 3 cut(s) 342, 784, 1220
MaeI CTAG 4 cut(s) 14, 596, 630, 702
MaeIII GTNAC 1 cut(s) 1256
MalI GATC 6 cut(s) 416, 946, 1140, 1188, 1218, 1263
MboI GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
MflI RGATCY 1 cut(s) 944
MluCI AATT 6 cut(s) 17, 157, 277, 468, 887, 1195
MlyI GAGTC 2 cut(s) 13, 891
MmeI TCCRAC 1 cut(s) 1190
Mph1103I ATGCAT 1 cut(s) 867
MroNI GCCGGC 1 cut(s) 581
MseI TTAA 4 cut(s) 252, 405, 722, 1245
MspI CCGG 3 cut(s) 74, 582, 1035
MspR9I CCNGG 2 cut(s) 314, 495
Mva1269I GAATGC 1 cut(s) 997
MvaI CCWGG 2 cut(s) 314, 495
MwoI GCNNNNNNNGC 6 cut(s) 509, 524, 826, 835, 986, 1231
NaeI GCCGGC 1 cut(s) 583
NdeI CATATG 1 cut(s) 432
NdeII GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
NgoMIV GCCGGC 1 cut(s) 581
NheI GCTAGC 1 cut(s) 629
NlaIII CATG 7 cut(s) 142, 265, 344, 910, 980, 1243, 1290
NlaIV GGNNCC 2 cut(s) 606, 1164
NmuCI GTSAC 1 cut(s) 1256
NsiI ATGCAT 1 cut(s) 867
NspI RCATGY 2 cut(s) 142, 910
PaeI GCATGC 1 cut(s) 910
PagI TCATGA 1 cut(s) 340
PciSI GCTCTTC 1 cut(s) 216
PctI GAATGC 1 cut(s) 997
PdiI GCCGGC 1 cut(s) 583
PfeI GAWTC 4 cut(s) 778, 895, 1133, 1172
PkrI GCNGC 5 cut(s) 72, 171, 357, 620, 912
PleI GAGTC 2 cut(s) 12, 890
PpsI GAGTC 2 cut(s) 12, 890
PpuMI RGGWCCY 1 cut(s) 605
Psp5II RGGWCCY 1 cut(s) 605
Psp6I CCWGG 2 cut(s) 312, 493
PspGI CCWGG 2 cut(s) 312, 493
PspN4I GGNNCC 2 cut(s) 606, 1164
PspPI GGNCC 3 cut(s) 605, 1106, 1163
PspPPI RGGWCCY 1 cut(s) 605
PsuI RGATCY 1 cut(s) 944
RsaI GTAC 6 cut(s) 23, 78, 450, 645, 700, 970
RsaNI GTAC 6 cut(s) 22, 77, 449, 644, 699, 969
SapI GCTCTTC 1 cut(s) 216
SaqAI TTAA 4 cut(s) 252, 405, 722, 1245
SatI GCNGC 5 cut(s) 71, 170, 356, 619, 911
Sau3AI GATC 6 cut(s) 414, 944, 1138, 1186, 1216, 1261
Sau96I GGNCC 3 cut(s) 605, 1106, 1163
SchI GAGTC 2 cut(s) 13, 891
ScrFI CCNGG 2 cut(s) 314, 495
SfaNI GCATC 3 cut(s) 342, 784, 1220
SfcI CTRYAG 1 cut(s) 234
SinI GGWCC 3 cut(s) 605, 1106, 1163
SmlI CTYRAG 2 cut(s) 1121, 1155
SmoI CTYRAG 2 cut(s) 1121, 1155
SphI GCATGC 1 cut(s) 910
Sse9I AATT 6 cut(s) 17, 157, 277, 468, 887, 1195
SsiI CCGC 3 cut(s) 71, 355, 911
SspI AATATT 1 cut(s) 65
SspMI CTAG 4 cut(s) 14, 596, 630, 702
StyD4I CCNGG 2 cut(s) 312, 493
StyI CCWWGG 2 cut(s) 636, 840
TaaI ACNGT 3 cut(s) 124, 268, 410
TaqI TCGA 2 cut(s) 1063, 1274
TaqII GACCGA 1 cut(s) 233
TasI AATT 6 cut(s) 17, 157, 277, 468, 887, 1195
TatI WGTACW 3 cut(s) 21, 448, 643
TauI GCSGC 3 cut(s) 73, 358, 913
TfiI GAWTC 4 cut(s) 778, 895, 1133, 1172
Tru1I TTAA 4 cut(s) 252, 405, 722, 1245
Tru9I TTAA 4 cut(s) 252, 405, 722, 1245
TscAI CASTG 2 cut(s) 233, 301
TseFI GTSAC 1 cut(s) 1256
TseI GCWGC 2 cut(s) 169, 618
Tsp45I GTSAC 1 cut(s) 1256
TspDTI ATGAA 2 cut(s) 151, 195
TspGWI ACGGA 1 cut(s) 894
TspRI CASTG 2 cut(s) 233, 301
VpaK11BI GGWCC 3 cut(s) 605, 1106, 1163
XapI RAATTY 1 cut(s) 277
XbaI TCTAGA 1 cut(s) 13
XceI RCATGY 2 cut(s) 142, 910
XcmI CCANNNNNNNNNTGG 1 cut(s) 622
XspI CTAG 4 cut(s) 14, 596, 630, 702
Zsp2I ATGCAT 1 cut(s) 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.