Rmu_sc0001629.1_g000016

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001629.1
OG0000153
Physical Location & Seq
Forward (+)
34919 .. 40633
5715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001629.1_g000016.1.cds

Sequence Viewer

Length: 2181 bp
atggagtcttggagaaaggggaagatcgttgcagtcgtgaccaaaggttgcagtagaaacaactgcggtggcacaaaacctggaacaaggttgaaggagaagctagggagttgtgagctcatcattcaaggggggaggggatatctgcctaccagttggaaagtttcctccttgccaactgacagggggaatcgatatccctcttggatatttgggagggcttcctttttgtttgcaatggcacaagcatctgattcttctcagcctactgaacttcatgaccaccacttctcactagaagatggtctcattcctgcttccaccgctggggcctgtgaaggtagctcagaggaggcatctcatgagttttctgggtgctttgtttctcccaagttcatatccaggttgcttattgagcggggagagtaccctgcagtgcctatatgtttcctgtatcctgcgaggacccctgcgggttggcttgaatgggtcagctttgaggtacaacaggaagagcttgaagaggcccttattggagctggagtgaagatttcactgtttattttccggcttttgcgaatctcgattgttggggatggtaatcccttcaagatagagctaaataaagcgcagaagaagaagctgcagattctgaaaaggggtgcttatgattctaaagaagtgttccgtttttgttactgggtgagacacttttggggctcgacggacagaggcaagtttaagcatggtgcagattttccctatgagaatgtgcagcagcgagtcttcccgttggccattatgctagcagccggtacttgttttctgctcgctcctctcttccttagtcatctatataggaaacttgatcagatttcaaaggatgataaagaaggtgcggggcgaaggaaggccaagaagggtgcatttaggcctgttgttttggacgacattgggaaattcaatttcagaccatatttcactgctcatggcttccagacatttcctttcttttatccagagggtaactcatcaccgttcctaaagccggttgagctacttctaaccactagtgcacagtccataatagcatgcggcgatttctttgaccccgtgatggagaagtattctccttatagagttaaaaggggtatgctctccgatagtctcaggaagaaagactgtgttggatcccctacatcaacattcttgagattttgggagttgcagcggtgcgagtttaggaggtttattcaaactggtgggactaggttgcgtccgaaagccactagtgagaagaagagactactccacaatagcactgtcatgggtgtcatgtctagacttaaccttccctatactgaggtatactcgaatggtataaagcgtgtggttggtcacctcaagggtggcaaaagtggagatgatcctgaagtagagttgccagctgccggaatggagaaaggtagcaagagtgcaacaaagggtaaagttagggcttccgaggatggaggagaaagtaaaaggaaggtttgccgcttcaaacctaaggtggcaaaagatcgtatccctcctctagtagtcaagagtgcctctggtgttaaagtgatactgccattgagtttagcttgtgaaaaagggaagaagaggaaagctgcttctaccctgagaccgagtgggtcccaaggtgatgtttatgttgatcttagtgatgggccaagcgccgacggggatggtagccccctgagtgatgaggagaatgagtctgatacttgtgagggaaagacctgcgatgacggtagccaggtggagtctcttcaagatgaggatggtcagggtaatccaactgtagcttcgatgggagaggatagctgcggtgataaccaagtagctggtgctctaatgcaggaatctgctgcaaatgttggtccttgtgcaaacaattgtaataagcaggacattggtatcaatggtttggcgaaagaacctactgcggacgatagtctttgtgaggatgaccataatgagtggggtggatcatttttgttgatagttggagggacatcatttgagccccatctccctgagacagcactgggggacgaaggcgttactgctgcaatcttggtcagtataggggttccactgtgtgttgcctccgcttgttctcttgctctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

726

Amino Acids

79.25

Weight (kDa)

8.33

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1796
AccBSI CCGCTC 1 cut(s) 418
AccI GTMKAC 1 cut(s) 1368
AclWI GGATC 4 cut(s) 1185, 1198, 1421, 2044
AcoI YGGCCR 1 cut(s) 795
AcsI RAATTY 1 cut(s) 959
AcuI CTGAAG 1 cut(s) 1452
AdeI CACNNNGTG 1 cut(s) 2150
AfaI GTAC 3 cut(s) 428, 504, 817
AfiI CCNNNNNNNGG 4 cut(s) 327, 1048, 1117, 1451
AhlI ACTAGT 2 cut(s) 1070, 1289
AjnI CCWGG 3 cut(s) 79, 401, 1803
AjuI GAANNNNNNNTTGG 2 cut(s) 1837, 1869
Alw21I GWGCWC 3 cut(s) 120, 1078, 1900
Alw26I GTCTC 7 cut(s) 311, 700, 1172, 1297, 1663, 1818, 2081
Alw44I GTGCAC 1 cut(s) 1074
AlwI GGATC 4 cut(s) 1185, 1198, 1421, 2044
AlwNI CAGNNNCTG 1 cut(s) 652
AoxI GGCC 6 cut(s) 330, 525, 795, 912, 932, 1715
ApaLI GTGCAC 1 cut(s) 1074
ApoI RAATTY 1 cut(s) 959
AspLEI GCGC 2 cut(s) 631, 1724
AspS9I GGNCC 6 cut(s) 330, 465, 526, 1680, 1715, 1928
AsuHPI GGTGA 5 cut(s) 715, 1026, 1391, 1700, 1889
AsuNHI GCTAGC 1 cut(s) 805
AvaII GGWCC 3 cut(s) 465, 1680, 1928
AxyI CCTNAGG 1 cut(s) 1548
BaeGI GKGCMC 1 cut(s) 1078
BaeI ACNNNNGTAYC 2 cut(s) 1948, 1981
BalI TGGCCA 1 cut(s) 797
BamHI GGATCC 1 cut(s) 1190
BanII GRGCYC 3 cut(s) 120, 722, 2076
BbsI GAAGAC 1 cut(s) 778
Bbv12I GWGCWC 3 cut(s) 120, 1078, 1900
BccI CCATC 9 cut(s) 296, 590, 1111, 1502, 1706, 1727, 1823, 1852, 2085
BciT130I CCWGG 3 cut(s) 81, 403, 1805
BciVI GTATCC 2 cut(s) 465, 1577
BclI TGATCA 1 cut(s) 868
BcoDI GTCTC 7 cut(s) 311, 700, 1172, 1297, 1663, 1818, 2081
BcuI ACTAGT 2 cut(s) 1070, 1289
BfaI CTAG 8 cut(s) 104, 296, 806, 1071, 1269, 1290, 1341, 1577
BfmI CTRYAG 3 cut(s) 432, 644, 1848
BfoI RGCGCY 1 cut(s) 1725
BfuAI ACCTGC 1 cut(s) 1796
BfuI GTATCC 2 cut(s) 465, 1577
Bme1390I CCNGG 3 cut(s) 81, 403, 1805
Bme18I GGWCC 3 cut(s) 465, 1680, 1928
BmgT120I GGNCC 6 cut(s) 330, 465, 526, 1680, 1715, 1928
BmiI GGNNCC 6 cut(s) 331, 467, 1192, 1681, 1682, 2142
BmrFI CCNGG 3 cut(s) 81, 403, 1805
BmrI ACTGGG 2 cut(s) 709, 2105
BmsI GCATC 2 cut(s) 257, 365
BmtI GCTAGC 1 cut(s) 809
BmuI ACTGGG 2 cut(s) 709, 2105
BoxI GACNNNNGTC 1 cut(s) 2001
BpiI GAAGAC 1 cut(s) 778
BplI GAGNNNNNCTC 4 cut(s) 1013, 1045, 1355, 1387
BpmI CTGGAG 1 cut(s) 561
BpuEI CTTGAG 2 cut(s) 1231, 1388
Bsa29I ATCGAT 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 600
BsaI GGTCTC 2 cut(s) 311, 1663
BsaJI CCNNGG 2 cut(s) 1503, 1684
BsaXI ACNNNNNCTCC 4 cut(s) 528, 558, 1748, 1778
Bsc4I CCNNNNNNNGG 4 cut(s) 327, 1048, 1117, 1451
Bse118I RCCGGY 2 cut(s) 812, 1048
Bse1I ACTGG 4 cut(s) 153, 704, 1264, 2100
Bse21I CCTNAGG 1 cut(s) 1548
Bse3DI GCAATG 1 cut(s) 243
Bse8I GATNNNNATC 1 cut(s) 600
BseBI CCWGG 3 cut(s) 81, 403, 1805
BseCI ATCGAT 1 cut(s) 193
BseDI CCNNGG 2 cut(s) 1503, 1684
BseGI GGATG 6 cut(s) 601, 889, 1513, 1738, 1834, 2020
BseJI GATNNNNATC 1 cut(s) 600
BseLI CCNNNNNNNGG 4 cut(s) 327, 1048, 1117, 1451
BseMI GCAATG 1 cut(s) 243
BseMII CTCAG 7 cut(s) 275, 360, 1183, 1353, 1658, 1736, 2076
BseNI ACTGG 4 cut(s) 153, 704, 1264, 2100
BseRI GAGGAG 5 cut(s) 365, 825, 1527, 1563, 1769
BseSI GKGCMC 1 cut(s) 1078
BseYI CCCAGC 1 cut(s) 326
BsgI GTGCAG 2 cut(s) 771, 794
BshFI GGCC 6 cut(s) 332, 527, 797, 914, 934, 1717
BshVI ATCGAT 1 cut(s) 193
BsiHKAI GWGCWC 3 cut(s) 120, 1078, 1900
BsiSI CCGG 4 cut(s) 568, 813, 1049, 1452
BslFI GGGAC 4 cut(s) 1279, 1666, 2074, 2114
BslI CCNNNNNNNGG 4 cut(s) 327, 1048, 1117, 1451
BsmAI GTCTC 7 cut(s) 311, 700, 1172, 1297, 1663, 1818, 2081
BsmFI GGGAC 4 cut(s) 1279, 1666, 2074, 2114
BsnI GGCC 6 cut(s) 332, 527, 797, 914, 934, 1717
Bso31I GGTCTC 2 cut(s) 311, 1663
Bsp1286I GDGCHC 5 cut(s) 120, 722, 1078, 1900, 2076
Bsp143I GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
BspANI GGCC 6 cut(s) 332, 527, 797, 914, 934, 1717
BspCNI CTCAG 7 cut(s) 274, 359, 1182, 1354, 1659, 1737, 2077
BspDI ATCGAT 1 cut(s) 193
BspHI TCATGA 2 cut(s) 277, 361
BspLI GGNNCC 6 cut(s) 331, 467, 1192, 1681, 1682, 2142
BspMAI CTGCAG 2 cut(s) 436, 648
BspMI ACCTGC 1 cut(s) 1796
BspOI GCTAGC 1 cut(s) 809
BspPI GGATC 4 cut(s) 1185, 1198, 1421, 2044
BspQI GCTCTTC 1 cut(s) 507
BspTNI GGTCTC 2 cut(s) 311, 1663
BsrBI CCGCTC 1 cut(s) 418
BsrDI GCAATG 1 cut(s) 243
BsrFI RCCGGY 2 cut(s) 812, 1048
BsrI ACTGG 4 cut(s) 153, 704, 1264, 2100
BssAI RCCGGY 2 cut(s) 812, 1048
BssECI CCNNGG 2 cut(s) 1503, 1684
BssMI GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
BssNAI GTATAC 1 cut(s) 1369
BssT1I CCWWGG 1 cut(s) 1684
Bst1107I GTATAC 1 cut(s) 1369
Bst2UI CCWGG 3 cut(s) 81, 403, 1805
Bst4CI ACNGT 8 cut(s) 558, 1038, 1080, 1184, 1324, 1799, 1849, 2148
Bst6I CTCTTC 6 cut(s) 507, 516, 845, 1295, 1640, 1821
BstC8I GCNNGC 4 cut(s) 807, 831, 1093, 1446
BstEII GGTNACC 1 cut(s) 1397
BstF5I GGATG 6 cut(s) 601, 889, 1513, 1738, 1834, 2020
BstH2I RGCGCY 1 cut(s) 1725
BstHHI GCGC 2 cut(s) 631, 1724
BstKTI GATC 7 cut(s) 27, 871, 1193, 1429, 1564, 1705, 2039
BstMAI GTCTC 7 cut(s) 311, 700, 1172, 1297, 1663, 1818, 2081
BstMBI GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
BstMWI GCNNNNNNNGC 3 cut(s) 323, 415, 1054
BstNI CCWGG 3 cut(s) 81, 403, 1805
BstNSI RCATGY 1 cut(s) 1095
BstPAI GACNNNNGTC 1 cut(s) 2001
BstPI GGTNACC 1 cut(s) 1397
BstSCI CCNGG 3 cut(s) 79, 401, 1803
BstSFI CTRYAG 3 cut(s) 432, 644, 1848
BstSLI GKGCMC 1 cut(s) 1078
BstV2I GAAGAC 1 cut(s) 778
BstX2I RGATCY 1 cut(s) 1190
BstXI CCANNNNNNTGG 1 cut(s) 1892
BstYI RGATCY 1 cut(s) 1190
BstZ17I GTATAC 1 cut(s) 1369
Bsu15I ATCGAT 1 cut(s) 193
Bsu36I CCTNAGG 1 cut(s) 1548
BsuI GTATCC 2 cut(s) 465, 1577
BsuRI GGCC 6 cut(s) 332, 527, 797, 914, 934, 1717
BsuTUI ATCGAT 1 cut(s) 193
BtgZI GCGATG 1 cut(s) 1806
BtsCI GGATG 6 cut(s) 601, 889, 1513, 1738, 1834, 2020
BtsI GCAGTG 2 cut(s) 441, 981
BtsIMutI CAGTG 6 cut(s) 441, 554, 981, 1320, 2093, 2144
BveI ACCTGC 1 cut(s) 1796
Cac8I GCNNGC 4 cut(s) 807, 831, 1093, 1446
CaiI CAGNNNCTG 1 cut(s) 652
CciI TCATGA 2 cut(s) 277, 361
CfoI GCGC 2 cut(s) 631, 1724
Cfr10I RCCGGY 2 cut(s) 812, 1048
Cfr13I GGNCC 6 cut(s) 330, 465, 526, 1680, 1715, 1928
ClaI ATCGAT 1 cut(s) 193
CseI GACGC 1 cut(s) 1265
Csp6I GTAC 3 cut(s) 427, 503, 816
CspCI CAANNNNNGTGG 2 cut(s) 49, 84
CviAII CATG 7 cut(s) 278, 362, 746, 989, 1092, 1327, 1336
CviQI GTAC 3 cut(s) 427, 503, 816
DpnI GATC 7 cut(s) 26, 870, 1192, 1428, 1563, 1704, 2038
DpnII GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
DraIII CACNNNGTG 1 cut(s) 2150
EaeI YGGCCR 1 cut(s) 795
Eam1104I CTCTTC 6 cut(s) 507, 516, 845, 1295, 1640, 1821
EarI CTCTTC 6 cut(s) 507, 516, 845, 1295, 1640, 1821
Ecl136II GAGCTC 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 1684
Eco147I AGGCCT 1 cut(s) 934
Eco24I GRGCYC 3 cut(s) 120, 722, 2076
Eco31I GGTCTC 2 cut(s) 311, 1663
Eco32I GATATC 2 cut(s) 143, 197
Eco47I GGWCC 3 cut(s) 465, 1680, 1928
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 1452
Eco81I CCTNAGG 1 cut(s) 1548
Eco91I GGTNACC 1 cut(s) 1397
EcoICRI GAGCTC 1 cut(s) 118
EcoO109I RGGNCCY 4 cut(s) 330, 465, 526, 1680
EcoO65I GGTNACC 1 cut(s) 1397
EcoRII CCWGG 3 cut(s) 79, 401, 1803
EcoRV GATATC 2 cut(s) 143, 197
EcoT14I CCWWGG 1 cut(s) 1684
EcoT38I GRGCYC 3 cut(s) 120, 722, 2076
ErhI CCWWGG 1 cut(s) 1684
FaeI CATG 7 cut(s) 281, 365, 749, 992, 1095, 1330, 1339
FalI AAGNNNNNCTT 4 cut(s) 513, 545, 649, 681
FaqI GGGAC 4 cut(s) 1279, 1666, 2074, 2114
FatI CATG 7 cut(s) 277, 361, 745, 988, 1091, 1326, 1335
FauI CCCGC 3 cut(s) 411, 466, 892
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 1 cut(s) 1368
FokI GGATG 6 cut(s) 608, 896, 1520, 1745, 1841, 2027
FriOI GRGCYC 3 cut(s) 120, 722, 2076
FspBI CTAG 8 cut(s) 104, 296, 806, 1071, 1269, 1290, 1341, 1577
GlaI GCGC 2 cut(s) 630, 1723
GsaI CCCAGC 1 cut(s) 330
GsuI CTGGAG 1 cut(s) 561
HaeII RGCGCY 1 cut(s) 1725
HaeIII GGCC 6 cut(s) 332, 527, 797, 914, 934, 1717
HapII CCGG 4 cut(s) 568, 813, 1049, 1452
HgaI GACGC 1 cut(s) 1265
HhaI GCGC 2 cut(s) 631, 1724
Hin1II CATG 7 cut(s) 281, 365, 749, 992, 1095, 1330, 1339
Hin6I GCGC 2 cut(s) 629, 1722
HinP1I GCGC 2 cut(s) 629, 1722
HpaII CCGG 4 cut(s) 568, 813, 1049, 1452
HphI GGTGA 5 cut(s) 715, 1026, 1391, 1700, 1889
Hpy166II GTNNAC 2 cut(s) 1076, 1369
Hpy188I TCNGA 9 cut(s) 253, 349, 654, 873, 971, 1162, 1281, 1504, 1768
Hpy8I GTNNAC 2 cut(s) 1076, 1369
Hpy99I CGWCG 2 cut(s) 727, 1730
HpyCH4III ACNGT 8 cut(s) 558, 1038, 1080, 1184, 1324, 1799, 1849, 2148
HpyF10VI GCNNNNNNNGC 3 cut(s) 323, 415, 1054
Hsp92II CATG 7 cut(s) 281, 365, 749, 992, 1095, 1330, 1339
HspAI GCGC 2 cut(s) 629, 1722
KflI GGGWCCC 1 cut(s) 1680
Ksp22I TGATCA 1 cut(s) 868
Kzo9I GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
LguI GCTCTTC 1 cut(s) 507
LmnI GCTCC 2 cut(s) 536, 838
LweI GCATC 2 cut(s) 257, 365
MaeI CTAG 8 cut(s) 104, 296, 806, 1071, 1269, 1290, 1341, 1577
MaeIII GTNAC 5 cut(s) 37, 695, 1025, 1397, 2110
MalI GATC 7 cut(s) 26, 870, 1192, 1428, 1563, 1704, 2038
MbiI CCGCTC 1 cut(s) 418
MboI GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
MfeI CAATTG 1 cut(s) 1942
MflI RGATCY 1 cut(s) 1190
MhlI GDGCHC 5 cut(s) 120, 722, 1078, 1900, 2076
MlsI TGGCCA 1 cut(s) 797
MluCI AATT 3 cut(s) 959, 964, 1942
MluNI TGGCCA 1 cut(s) 797
MlyI GAGTC 4 cut(s) 14, 792, 1772, 1820
MmeI TCCRAC 4 cut(s) 137, 1168, 1868, 2035
Mox20I TGGCCA 1 cut(s) 797
MscI TGGCCA 1 cut(s) 797
MseI TTAA 4 cut(s) 741, 1143, 1347, 1602
MslI CAYNNNNRTG 1 cut(s) 1325
Msp20I TGGCCA 1 cut(s) 797
MspA1I CMGCKG 3 cut(s) 326, 1231, 1448
MspI CCGG 4 cut(s) 568, 813, 1049, 1452
MspR9I CCNGG 3 cut(s) 81, 403, 1805
MunI CAATTG 1 cut(s) 1942
MvaI CCWGG 3 cut(s) 81, 403, 1805
MwoI GCNNNNNNNGC 3 cut(s) 323, 415, 1054
NdeII GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
NheI GCTAGC 1 cut(s) 805
NlaIII CATG 7 cut(s) 281, 365, 749, 992, 1095, 1330, 1339
NlaIV GGNNCC 6 cut(s) 331, 467, 1192, 1681, 1682, 2142
NmuCI GTSAC 2 cut(s) 37, 1397
NspI RCATGY 1 cut(s) 1095
PaeI GCATGC 1 cut(s) 1095
PagI TCATGA 2 cut(s) 277, 361
PceI AGGCCT 1 cut(s) 934
PciSI GCTCTTC 1 cut(s) 507
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PfeI GAWTC 6 cut(s) 190, 254, 579, 649, 671, 1910
PleI GAGTC 4 cut(s) 13, 791, 1771, 1819
PpsI GAGTC 4 cut(s) 13, 791, 1771, 1819
PpuMI RGGWCCY 2 cut(s) 465, 1680
PshAI GACNNNNGTC 1 cut(s) 2001
Psp124BI GAGCTC 1 cut(s) 120
Psp5II RGGWCCY 2 cut(s) 465, 1680
Psp6I CCWGG 3 cut(s) 79, 401, 1803
PspEI GGTNACC 1 cut(s) 1397
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 3 cut(s) 79, 401, 1803
PspN4I GGNNCC 6 cut(s) 331, 467, 1192, 1681, 1682, 2142
PspPI GGNCC 6 cut(s) 330, 465, 526, 1680, 1715, 1928
PspPPI RGGWCCY 2 cut(s) 465, 1680
PstI CTGCAG 2 cut(s) 436, 648
PstNI CAGNNNCTG 1 cut(s) 652
PsuI RGATCY 1 cut(s) 1190
PvuII CAGCTG 1 cut(s) 1448
RsaI GTAC 3 cut(s) 428, 504, 817
RsaNI GTAC 3 cut(s) 427, 503, 816
RseI CAYNNNNRTG 1 cut(s) 1325
SacI GAGCTC 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 507
SaqAI TTAA 4 cut(s) 741, 1143, 1347, 1602
Sau3AI GATC 7 cut(s) 24, 868, 1190, 1426, 1561, 1702, 2036
Sau96I GGNCC 6 cut(s) 330, 465, 526, 1680, 1715, 1928
SchI GAGTC 4 cut(s) 14, 792, 1772, 1820
ScrFI CCNGG 3 cut(s) 81, 403, 1805
SduI GDGCHC 5 cut(s) 120, 722, 1078, 1900, 2076
SfaNI GCATC 2 cut(s) 257, 365
SfcI CTRYAG 3 cut(s) 432, 644, 1848
SinI GGWCC 3 cut(s) 465, 1680, 1928
SmiMI CAYNNNNRTG 1 cut(s) 1325
SmlI CTYRAG 2 cut(s) 1210, 1403
SmoI CTYRAG 2 cut(s) 1210, 1403
SpeI ACTAGT 2 cut(s) 1070, 1289
SphI GCATGC 1 cut(s) 1095
Sse9I AATT 3 cut(s) 959, 964, 1942
SseBI AGGCCT 1 cut(s) 934
SspMI CTAG 8 cut(s) 104, 296, 806, 1071, 1269, 1290, 1341, 1577
SstI GAGCTC 1 cut(s) 120
StuI AGGCCT 1 cut(s) 934
StyD4I CCNGG 3 cut(s) 79, 401, 1803
StyI CCWWGG 1 cut(s) 1684
TaaI ACNGT 8 cut(s) 558, 1038, 1080, 1184, 1324, 1799, 1849, 2148
TaqI TCGA 5 cut(s) 193, 584, 722, 1373, 1856
TaqII GACCGA 1 cut(s) 1687
TasI AATT 3 cut(s) 959, 964, 1942
TauI GCSGC 2 cut(s) 1098, 1539
TfiI GAWTC 6 cut(s) 190, 254, 579, 649, 671, 1910
Tru1I TTAA 4 cut(s) 741, 1143, 1347, 1602
Tru9I TTAA 4 cut(s) 741, 1143, 1347, 1602
TscAI CASTG 6 cut(s) 441, 561, 988, 1327, 2100, 2151
TseFI GTSAC 2 cut(s) 37, 1397
Tsp45I GTSAC 2 cut(s) 37, 1397
TspDTI ATGAA 2 cut(s) 266, 385
TspGWI ACGGA 2 cut(s) 677, 740
TspRI CASTG 6 cut(s) 441, 561, 988, 1327, 2100, 2151
VneI GTGCAC 1 cut(s) 1074
VpaK11BI GGWCC 3 cut(s) 465, 1680, 1928
XapI RAATTY 1 cut(s) 959
XbaI TCTAGA 1 cut(s) 1340
XceI RCATGY 1 cut(s) 1095
XmiI GTMKAC 1 cut(s) 1368
XspI CTAG 8 cut(s) 104, 296, 806, 1071, 1269, 1290, 1341, 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.