Rmu_ssc0000003.1_g000015

Cell division cycle protein 48 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000003.1
OG0000153
Physical Location & Seq
Forward (+)
58634 .. 62082
3449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000003.1_g000015.1.cds

Sequence Viewer

Length: 1404 bp
atgatggatgctcacggctatgcatcttctcccttggccttgcttgaactcgtggagatgactagaggatggaaaggaaaatggaaaggaaatggagagacaaagaaaatggaatggatcaaggaatgtgtgtccttgtgtcttgtttttgcctctatttataggcttccaagttatgggagaggaccccttctcaacgtcaaagagggaagtatttataggagcacggctagggttcacaaagcaatcagaaatttccacatagctaccaccaatgagaattcgccaaataagctttgtgatgtagtccaaccaatgtctaagagttctccttctcctcgtggtcctccagcttatcttgagttatctgaatctgatcacggagagggttctcaagggggtccaaccgattcttcaaaagaggatcatactaatctttcaaaaggggcatctgatcatctgcctgaagcgcctcccatgattagccaagatggtgacgatcaggttatcaaagatgaaggcatgagtgatggcgataaggttgtcgaagataaaggcgtgagtgatggtgataaggttgtcgaagatgaaggcatgagtgatagtgataagaagcaggatcatccttcaggtgttggtaagagtaatgacggggttggtcatgacacggcagtacatgccttagttgagtctgataagcacgctccagggattgataaggtgactgtcattcagactcaaagccttggcccaagcttgcctgttaaagggtcaactagtgagtgggcgacccatatggacaactttatgattcgatttgcttctaaagaggagtctgttctaggcatggctgatgttgcaccagtattgagcggagacaccgctgtttttgcgggtatgaaaattccttcagaattagcgggtcccttggctaaatttgctgagagatatagtggtggagatatatttagcttaattgatcgagactatacttcaaggaagaagtgcgagttggttaaagaacttggcatgatgttgtacaaaatggaaattttccagataaaagatggagaagtgttccttatttggagtgacgcttgtcgtgatttcatgggggcaggtcttaatgttggcttcctgctggattccttaaaacaaggtgcaaagcacttctttggttatatgatgaggtctgaaggattagagaaccagtatgttaaaattcgtggtctgcaggagatggtttcacaaaccaagaaggagcttgcacgtcttgagggagagttacgcaaggctcaagatgatctgagtttcagtttgcgtgacgttcctgtgcctgctatggagtgtgtactagaatcttcttggaatgatgacagttacttctctcattatctatattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 ko05134 map04141 map05134
Pfam Domains
Protein Families
CDC48_2 CDC48_N Vps4_C

Protein Analysis

467

Amino Acids

51.34

Weight (kDa)

5.19

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1109
AccB7I CCANNNNNTGG 1 cut(s) 176
AccBSI CCGCTC 1 cut(s) 873
AciI CCGC 4 cut(s) 873, 882, 893, 920
AclWI GGATC 3 cut(s) 125, 432, 627
AcsI RAATTY 6 cut(s) 253, 280, 903, 935, 1050, 1221
AcuI CTGAAG 4 cut(s) 486, 612, 894, 1215
AfaI GTAC 3 cut(s) 675, 1040, 1353
AfiI CCNNNNNNNGG 2 cut(s) 176, 767
AgsI TTSAA 4 cut(s) 47, 417, 441, 996
AhlI ACTAGT 1 cut(s) 776
AjiI CACGTC 1 cut(s) 1271
AjnI CCWGG 1 cut(s) 706
AjuI GAANNNNNNNTTGG 4 cut(s) 397, 429, 995, 1027
AluBI AGCT 6 cut(s) 266, 295, 353, 756, 972, 1264
AluI AGCT 6 cut(s) 266, 295, 353, 756, 972, 1264
Alw21I GWGCWC 1 cut(s) 227
Alw26I GTCTC 3 cut(s) 92, 870, 978
AlwI GGATC 3 cut(s) 125, 432, 627
AoxI GGCC 2 cut(s) 36, 748
ApoI RAATTY 6 cut(s) 253, 280, 903, 935, 1050, 1221
AspLEI GCGC 1 cut(s) 472
AspS9I GGNCC 5 cut(s) 185, 344, 401, 749, 923
AsuHPI GGTGA 3 cut(s) 506, 581, 733
AvaII GGWCC 4 cut(s) 185, 344, 401, 923
BauI CACGAG 2 cut(s) 50, 339
Bbv12I GWGCWC 1 cut(s) 227
BccI CCATC 6 cut(s) 63, 485, 524, 560, 1061, 1234
BceAI ACGGC 3 cut(s) 31, 243, 684
BciT130I CCWGG 1 cut(s) 708
BclI TGATCA 2 cut(s) 376, 454
BcoDI GTCTC 3 cut(s) 92, 870, 978
BcuI ACTAGT 1 cut(s) 776
BfaI CTAG 5 cut(s) 63, 231, 777, 842, 1355
BfmI CTRYAG 1 cut(s) 1232
BfoI RGCGCY 1 cut(s) 473
BfuAI ACCTGC 1 cut(s) 1109
Bme1390I CCNGG 1 cut(s) 708
Bme18I GGWCC 4 cut(s) 185, 344, 401, 923
BmgBI CACGTC 1 cut(s) 1271
BmgT120I GGNCC 5 cut(s) 185, 344, 401, 749, 923
BmiI GGNNCC 4 cut(s) 187, 402, 924, 925
BmrFI CCNGG 1 cut(s) 708
BmsI GCATC 2 cut(s) 32, 458
BoxI GACNNNNGTC 1 cut(s) 1098
BpmI CTGGAG 2 cut(s) 333, 690
BpuEI CTTGAG 4 cut(s) 378, 380, 1281, 1295
BsaJI CCNNGG 4 cut(s) 33, 707, 745, 927
Bsc4I CCNNNNNNNGG 2 cut(s) 176, 767
Bse1I ACTGG 2 cut(s) 863, 1210
BseBI CCWGG 1 cut(s) 708
BseDI CCNNGG 4 cut(s) 33, 707, 745, 927
BseGI GGATG 3 cut(s) 13, 74, 622
BseLI CCNNNNNNNGG 2 cut(s) 176, 767
BseMII CTCAG 2 cut(s) 933, 1298
BseNI ACTGG 2 cut(s) 863, 1210
BseRI GAGGAG 2 cut(s) 327, 845
BshFI GGCC 2 cut(s) 38, 750
BsiHKAI GWGCWC 1 cut(s) 227
BslFI GGGAC 1 cut(s) 909
BslI CCNNNNNNNGG 2 cut(s) 176, 767
BsmAI GTCTC 3 cut(s) 92, 870, 978
BsmFI GGGAC 1 cut(s) 909
BsnI GGCC 2 cut(s) 38, 750
Bsp1286I GDGCHC 1 cut(s) 227
Bsp1407I TGTACA 1 cut(s) 1038
Bsp143I GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
BspACI CCGC 4 cut(s) 873, 882, 893, 920
BspANI GGCC 2 cut(s) 38, 750
BspCNI CTCAG 2 cut(s) 934, 1299
BspHI TCATGA 1 cut(s) 661
BspLI GGNNCC 4 cut(s) 187, 402, 924, 925
BspMAI CTGCAG 1 cut(s) 1236
BspMI ACCTGC 1 cut(s) 1109
BspPI GGATC 3 cut(s) 125, 432, 627
BsrBI CCGCTC 1 cut(s) 873
BsrGI TGTACA 1 cut(s) 1038
BsrI ACTGG 2 cut(s) 863, 1210
BssECI CCNNGG 4 cut(s) 33, 707, 745, 927
BssMI GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
BssSI CACGAG 2 cut(s) 50, 339
BssT1I CCWWGG 3 cut(s) 33, 745, 927
Bst2BI CACGAG 2 cut(s) 50, 339
Bst2UI CCWGG 1 cut(s) 708
Bst4CI ACNGT 2 cut(s) 727, 1379
BstAPI GCANNNNNTGC 1 cut(s) 677
BstAUI TGTACA 1 cut(s) 1038
BstC8I GCNNGC 4 cut(s) 702, 758, 1266, 1338
BstDEI CTNAG 4 cut(s) 321, 682, 942, 1307
BstENI CCTNNNNNAGG 1 cut(s) 765
BstF5I GGATG 3 cut(s) 13, 74, 622
BstH2I RGCGCY 1 cut(s) 473
BstHHI GCGC 1 cut(s) 472
BstKTI GATC 8 cut(s) 120, 379, 427, 457, 502, 622, 982, 1306
BstMAI GTCTC 3 cut(s) 92, 870, 978
BstMBI GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
BstMWI GCNNNNNNNGC 6 cut(s) 292, 469, 677, 857, 890, 938
BstNI CCWGG 1 cut(s) 708
BstNSI RCATGY 1 cut(s) 680
BstPAI GACNNNNGTC 1 cut(s) 1098
BstSCI CCNGG 1 cut(s) 706
BstSFI CTRYAG 1 cut(s) 1232
BsuRI GGCC 2 cut(s) 38, 750
BtrI CACGTC 1 cut(s) 1271
BtsCI GGATG 3 cut(s) 13, 74, 622
BveI ACCTGC 1 cut(s) 1109
Cac8I GCNNGC 4 cut(s) 702, 758, 1266, 1338
CciI TCATGA 1 cut(s) 661
CfoI GCGC 1 cut(s) 472
Cfr13I GGNCC 5 cut(s) 185, 344, 401, 749, 923
CseI GACGC 1 cut(s) 1103
Csp6I GTAC 3 cut(s) 674, 1039, 1352
CviAII CATG 8 cut(s) 478, 523, 595, 662, 677, 847, 1030, 1111
CviQI GTAC 3 cut(s) 674, 1039, 1352
DdeI CTNAG 4 cut(s) 321, 682, 942, 1307
DpnI GATC 8 cut(s) 119, 378, 426, 456, 501, 621, 981, 1305
DpnII GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
Eco130I CCWWGG 3 cut(s) 33, 745, 927
Eco47I GGWCC 4 cut(s) 185, 344, 401, 923
Eco57I CTGAAG 4 cut(s) 486, 612, 894, 1215
EcoNI CCTNNNNNAGG 1 cut(s) 765
EcoO109I RGGNCCY 2 cut(s) 185, 923
EcoRI GAATTC 1 cut(s) 280
EcoRII CCWGG 1 cut(s) 706
EcoT14I CCWWGG 3 cut(s) 33, 745, 927
EcoT22I ATGCAT 1 cut(s) 25
ErhI CCWWGG 3 cut(s) 33, 745, 927
FaeI CATG 8 cut(s) 481, 526, 598, 665, 680, 850, 1033, 1114
FalI AAGNNNNNCTT 4 cut(s) 1065, 1097, 1157, 1189
FaqI GGGAC 1 cut(s) 909
FatI CATG 8 cut(s) 477, 522, 594, 661, 676, 846, 1029, 1110
FauI CCCGC 2 cut(s) 886, 913
FauNDI CATATG 1 cut(s) 795
FbaI TGATCA 2 cut(s) 376, 454
FokI GGATG 3 cut(s) 20, 81, 609
FspBI CTAG 5 cut(s) 63, 231, 777, 842, 1355
GlaI GCGC 1 cut(s) 471
GsuI CTGGAG 2 cut(s) 333, 690
HaeII RGCGCY 1 cut(s) 473
HaeIII GGCC 2 cut(s) 38, 750
HgaI GACGC 1 cut(s) 1103
HhaI GCGC 1 cut(s) 472
Hin1II CATG 8 cut(s) 481, 526, 598, 665, 680, 850, 1033, 1114
Hin6I GCGC 1 cut(s) 470
HinP1I GCGC 1 cut(s) 470
HincII GTYRAC 1 cut(s) 774
HindII GTYRAC 1 cut(s) 774
HindIII AAGCTT 2 cut(s) 293, 754
HinfI GANTC 8 cut(s) 371, 410, 689, 736, 811, 833, 1145, 1358
HphI GGTGA 3 cut(s) 506, 581, 733
Hpy166II GTNNAC 3 cut(s) 238, 774, 1352
Hpy188I TCNGA 9 cut(s) 251, 370, 376, 454, 694, 735, 913, 1195, 1308
Hpy188III TCNNGA 7 cut(s) 359, 662, 983, 1057, 1103, 1274, 1298
Hpy8I GTNNAC 3 cut(s) 238, 774, 1352
HpyAV CCTTC 8 cut(s) 200, 342, 512, 584, 636, 918, 1190, 1252
HpyCH4III ACNGT 2 cut(s) 727, 1379
HpyCH4IV ACGT 3 cut(s) 198, 1270, 1326
HpyCH4V TGCA 5 cut(s) 23, 860, 1163, 1234, 1268
HpyF10VI GCNNNNNNNGC 6 cut(s) 292, 469, 677, 857, 890, 938
HpyF3I CTNAG 4 cut(s) 321, 682, 942, 1307
HpySE526I ACGT 3 cut(s) 198, 1270, 1326
Hsp92II CATG 8 cut(s) 481, 526, 598, 665, 680, 850, 1033, 1114
HspAI GCGC 1 cut(s) 470
KflI GGGWCCC 1 cut(s) 923
Ksp22I TGATCA 2 cut(s) 376, 454
Kzo9I GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
LmnI GCTCC 3 cut(s) 222, 709, 1261
LweI GCATC 2 cut(s) 32, 458
MaeI CTAG 5 cut(s) 63, 231, 777, 842, 1355
MaeII ACGT 3 cut(s) 198, 1270, 1326
MaeIII GTNAC 6 cut(s) 494, 721, 1091, 1284, 1322, 1379
MalI GATC 8 cut(s) 119, 378, 426, 456, 501, 621, 981, 1305
MbiI CCGCTC 1 cut(s) 873
MboI GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
MboII GAAGA 6 cut(s) 18, 405, 560, 596, 1012, 1353
MhlI GDGCHC 1 cut(s) 227
MluCI AATT 8 cut(s) 253, 280, 903, 914, 935, 975, 1050, 1221
MlyI GAGTC 3 cut(s) 698, 730, 842
MmeI TCCRAC 2 cut(s) 334, 428
Mph1103I ATGCAT 1 cut(s) 25
MseI TTAA 6 cut(s) 765, 974, 1017, 1125, 1151, 1218
MslI CAYNNNNRTG 1 cut(s) 18
MspA1I CMGCKG 1 cut(s) 884
MspR9I CCNGG 1 cut(s) 708
MvaI CCWGG 1 cut(s) 708
MwoI GCNNNNNNNGC 6 cut(s) 292, 469, 677, 857, 890, 938
NdeI CATATG 1 cut(s) 795
NdeII GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
NlaIII CATG 8 cut(s) 481, 526, 598, 665, 680, 850, 1033, 1114
NlaIV GGNNCC 4 cut(s) 187, 402, 924, 925
NmuCI GTSAC 4 cut(s) 494, 721, 1091, 1322
NsiI ATGCAT 1 cut(s) 25
NspI RCATGY 1 cut(s) 680
PagI TCATGA 1 cut(s) 661
PfeI GAWTC 5 cut(s) 371, 410, 811, 1145, 1358
PflMI CCANNNNNTGG 1 cut(s) 176
PleI GAGTC 3 cut(s) 697, 730, 841
PpsI GAGTC 3 cut(s) 697, 730, 841
PpuMI RGGWCCY 2 cut(s) 185, 923
PshAI GACNNNNGTC 1 cut(s) 1098
Psp5II RGGWCCY 2 cut(s) 185, 923
Psp6I CCWGG 1 cut(s) 706
PspGI CCWGG 1 cut(s) 706
PspN4I GGNNCC 4 cut(s) 187, 402, 924, 925
PspPI GGNCC 5 cut(s) 185, 344, 401, 749, 923
PspPPI RGGWCCY 2 cut(s) 185, 923
PstI CTGCAG 1 cut(s) 1236
RsaI GTAC 3 cut(s) 675, 1040, 1353
RsaNI GTAC 3 cut(s) 674, 1039, 1352
RseI CAYNNNNRTG 1 cut(s) 18
SaqAI TTAA 6 cut(s) 765, 974, 1017, 1125, 1151, 1218
Sau3AI GATC 8 cut(s) 117, 376, 424, 454, 499, 619, 979, 1303
Sau96I GGNCC 5 cut(s) 185, 344, 401, 749, 923
SchI GAGTC 3 cut(s) 698, 730, 842
ScrFI CCNGG 1 cut(s) 708
SduI GDGCHC 1 cut(s) 227
SfaNI GCATC 2 cut(s) 32, 458
SfcI CTRYAG 1 cut(s) 1232
SinI GGWCC 4 cut(s) 185, 344, 401, 923
SmiMI CAYNNNNRTG 1 cut(s) 18
SmlI CTYRAG 4 cut(s) 359, 393, 1274, 1296
SmoI CTYRAG 4 cut(s) 359, 393, 1274, 1296
SpeI ACTAGT 1 cut(s) 776
Sse9I AATT 8 cut(s) 253, 280, 903, 914, 935, 975, 1050, 1221
SsiI CCGC 4 cut(s) 873, 882, 893, 920
SspMI CTAG 5 cut(s) 63, 231, 777, 842, 1355
StyD4I CCNGG 1 cut(s) 706
StyI CCWWGG 3 cut(s) 33, 745, 927
TaaI ACNGT 2 cut(s) 727, 1379
TaiI ACGT 3 cut(s) 201, 1273, 1329
TaqI TCGA 4 cut(s) 546, 582, 814, 982
TasI AATT 8 cut(s) 253, 280, 903, 914, 935, 975, 1050, 1221
TatI WGTACW 3 cut(s) 673, 1038, 1351
TfiI GAWTC 5 cut(s) 371, 410, 811, 1145, 1358
Tru1I TTAA 6 cut(s) 765, 974, 1017, 1125, 1151, 1218
Tru9I TTAA 6 cut(s) 765, 974, 1017, 1125, 1151, 1218
TseFI GTSAC 4 cut(s) 494, 721, 1091, 1322
Tsp45I GTSAC 4 cut(s) 494, 721, 1091, 1322
TspDTI ATGAA 4 cut(s) 531, 603, 914, 1099
TspGWI ACGGA 1 cut(s) 396
Van91I CCANNNNNTGG 1 cut(s) 176
VpaK11BI GGWCC 4 cut(s) 185, 344, 401, 923
XagI CCTNNNNNAGG 1 cut(s) 765
XapI RAATTY 6 cut(s) 253, 280, 903, 935, 1050, 1221
XceI RCATGY 1 cut(s) 680
XcmI CCANNNNNNNNNTGG 1 cut(s) 1064
XspI CTAG 5 cut(s) 63, 231, 777, 842, 1355
Zsp2I ATGCAT 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.