Rmu_sc0005600.1_g000021

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005600.1
OG0000153
Physical Location & Seq
Forward (+)
107122 .. 110454
3333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005600.1_g000021.1.cds

Sequence Viewer

Length: 1806 bp
atgcggcaacttggttgccttcaggatgttccctcacctccacctcgctctcttaactctaagatcacaagcttttctcatatagagcgtagatgtgtacttgacttctctggcagaattgcggacttcccatctcagttcaggctttttgtggaagccggtagtccccagctagagttgggacctattaccagcagtaggttggctagcctcagggctgtactgacttatgctgaaaagcacaatctcacatatactgaagtgtacagcgatggtactagaaagattgtcggctatttaaagggttttgaagctaagagggtgaagggagagggaaagaagtgcgataagaagacgggtgataaggatgatgcaaaggaacacaacactcagaagcctattcggtgtttcaagcccaaggtggattttgataagtttatgcatacgacccaacacggagtcaaattgatgattcccccgagcatgccgcttcaaaggaataaggaggtaaagaagaaaagatcctcaacctcccgagcgagtggtacttctcatgcaaagcaagcgaatgctataagttctgtagtgaagaaaggggtgaagagggaggccggtgtagattttgatgtccctcttcgtcgaagtaaccgtgtaaagtctatgagttctccttctcctcgtggtcctccagcttatgttgagttgtctgagtccgatcacggagagggttctcaagagggtccaactgattcttctaaagaggaccatactaatttttcaaaagaggtatctgatcatctgcctgaagtgcctcccatgattaaccaagatggtgacgatcaggttatcgaagatgaaggcatgagtgatggtgataaggttatcgaagataaaggcatgagtgatggtgataaccaagcctttgaaaacggcagtgtgagcaatgacaatcaggttgatgcggaatttgagcctttgcagcatagtccgagtgagagtgaaaataatgatcaggagcaggggcatccttcagaagttgataagagtactgacggggttggtcataacacggcggtacacgccttagttgagtctgataagcacattccagggattgataaggtgactgccattcacactcaaagccttggccccagcttgcctgccaaagggtcaactagtgagtgggcgacccatatggacaactttatgattcgatttgcttctaaagaggagtctgctctaggcatggctgatgttgcaccagtattgagcgaaaacactgctgtttttgcgggtatgaaaattccttcagagttagcgggtcccttggctagatttgctgagagatatagcggtggaaatatctttaacttaattgatcgagactatacttcaaggaagaagtgtgagttgattaaggaacttggcatgatgttgttcagcatggaagtttgccagataaaagatggagaagtattccttatttggagagacacctgtcgtgatttcatgggggcaggtcttaaccttggcttcctgttggatttcttaaaacaaggtgcaaagcatttctttggttatatgatgaggtctgaaggatcagagaaccactatgttaaaattcgtggtctgcaggagatggtttcacaaaccaagaaggagcttgcacgtcttgagggagagttgcgcaaggctcaagatgatctgagtttcaatttgcgtgacgttcctgtgcctgctatggagtgtgtactagaatcttcttggaaggatgacagtcacttctctcattatctatattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

601

Amino Acids

66.8

Weight (kDa)

5.9

Isoelectric Point (pI)

47.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1691
Acc36I ACCTGC 1 cut(s) 1511
AciI CCGC 8 cut(s) 4, 122, 488, 962, 1073, 1295, 1322, 1356
AclWI GGATC 2 cut(s) 516, 1609
AcsI RAATTY 3 cut(s) 965, 1305, 1623
AcuI CTGAAG 6 cut(s) 5, 279, 825, 1014, 1296, 1617
AfaI GTAC 8 cut(s) 99, 222, 266, 277, 547, 1048, 1077, 1755
AfiI CCNNNNNNNGG 2 cut(s) 198, 1169
AgsI TTSAA 7 cut(s) 311, 412, 494, 780, 926, 1398, 1717
AhlI ACTAGT 1 cut(s) 1178
AjiI CACGTC 1 cut(s) 1673
AjnI CCWGG 1 cut(s) 1108
AjuI GAANNNNNNNTTGG 2 cut(s) 736, 768
AluBI AGCT 6 cut(s) 72, 172, 314, 692, 1158, 1666
AluI AGCT 6 cut(s) 72, 172, 314, 692, 1158, 1666
Alw26I GTCTC 2 cut(s) 1380, 1488
AlwI GGATC 2 cut(s) 516, 1609
Ama87I CYCGRG 2 cut(s) 478, 534
AoxI GGCC 2 cut(s) 609, 1150
ApeKI GCWGC 1 cut(s) 979
ApoI RAATTY 3 cut(s) 965, 1305, 1623
AspLEI GCGC 1 cut(s) 1692
AspS9I GGNCC 6 cut(s) 182, 683, 740, 763, 1151, 1325
AsuHPI GGTGA 8 cut(s) 27, 334, 371, 610, 845, 884, 920, 1135
AsuNHI GCTAGC 1 cut(s) 206
AvaI CYCGRG 2 cut(s) 478, 534
AvaII GGWCC 5 cut(s) 182, 683, 740, 763, 1325
AxyI CCTNAGG 1 cut(s) 212
BauI CACGAG 1 cut(s) 678
BbsI GAAGAC 1 cut(s) 359
BbvI GCAGC 1 cut(s) 991
BccI CCATC 7 cut(s) 139, 266, 824, 863, 899, 1463, 1636
BceAI ACGGC 2 cut(s) 946, 1086
BcgI CGANNNNNNTGC 2 cut(s) 1265, 1299
BciT130I CCWGG 1 cut(s) 1110
BclI TGATCA 2 cut(s) 793, 1009
BcoDI GTCTC 2 cut(s) 1380, 1488
BcuI ACTAGT 1 cut(s) 1178
BfaI CTAG 7 cut(s) 173, 207, 279, 1179, 1244, 1335, 1757
BfmI CTRYAG 2 cut(s) 582, 1634
BfuAI ACCTGC 1 cut(s) 1511
BisI GCNGC 3 cut(s) 5, 488, 980
BlsI GCNGC 3 cut(s) 6, 489, 981
BmcAI AGTACT 1 cut(s) 1048
Bme1390I CCNGG 1 cut(s) 1110
Bme18I GGWCC 5 cut(s) 182, 683, 740, 763, 1325
BmeT110I CYCGRG 2 cut(s) 478, 534
BmgBI CACGTC 1 cut(s) 1673
BmgT120I GGNCC 6 cut(s) 182, 683, 740, 763, 1151, 1325
BmiI GGNNCC 5 cut(s) 183, 741, 1153, 1326, 1327
BmrFI CCNGG 1 cut(s) 1110
BmsI GCATC 3 cut(s) 361, 949, 1033
BmtI GCTAGC 1 cut(s) 210
BoxI GACNNNNGTC 1 cut(s) 1500
BpiI GAAGAC 1 cut(s) 359
BpmI CTGGAG 1 cut(s) 672
BpuEI CTTGAG 3 cut(s) 717, 1683, 1697
BsaJI CCNNGG 5 cut(s) 417, 1109, 1147, 1329, 1531
Bsc4I CCNNNNNNNGG 2 cut(s) 198, 1169
Bse118I RCCGGY 2 cut(s) 158, 611
Bse1I ACTGG 1 cut(s) 1265
Bse21I CCTNAGG 1 cut(s) 212
Bse3DI GCAATG 1 cut(s) 949
BseBI CCWGG 1 cut(s) 1110
BseDI CCNNGG 5 cut(s) 417, 1109, 1147, 1329, 1531
BseGI GGATG 4 cut(s) 31, 373, 1024, 1780
BseLI CCNNNNNNNGG 2 cut(s) 198, 1169
BseMI GCAATG 1 cut(s) 949
BseMII CTCAG 6 cut(s) 149, 226, 404, 699, 1335, 1700
BseNI ACTGG 1 cut(s) 1265
BseRI GAGGAG 2 cut(s) 666, 1247
BseXI GCAGC 1 cut(s) 991
BseYI CCCAGC 2 cut(s) 168, 1154
BshFI GGCC 2 cut(s) 611, 1152
BsiHKCI CYCGRG 2 cut(s) 478, 534
BsiSI CCGG 2 cut(s) 159, 612
BslFI GGGAC 4 cut(s) 150, 195, 614, 1311
BslI CCNNNNNNNGG 2 cut(s) 198, 1169
BsmAI GTCTC 2 cut(s) 1380, 1488
BsmFI GGGAC 4 cut(s) 150, 195, 614, 1311
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 2 cut(s) 611, 1152
BsoBI CYCGRG 2 cut(s) 478, 534
Bsp1407I TGTACA 1 cut(s) 264
Bsp143I GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
BspACI CCGC 8 cut(s) 4, 122, 488, 962, 1073, 1295, 1322, 1356
BspANI GGCC 2 cut(s) 611, 1152
BspCNI CTCAG 6 cut(s) 148, 225, 403, 700, 1336, 1701
BspLI GGNNCC 5 cut(s) 183, 741, 1153, 1326, 1327
BspMAI CTGCAG 1 cut(s) 1638
BspMI ACCTGC 1 cut(s) 1511
BspOI GCTAGC 1 cut(s) 210
BspPI GGATC 2 cut(s) 516, 1609
BsrDI GCAATG 1 cut(s) 949
BsrFI RCCGGY 2 cut(s) 158, 611
BsrGI TGTACA 1 cut(s) 264
BsrI ACTGG 1 cut(s) 1265
BssAI RCCGGY 2 cut(s) 158, 611
BssECI CCNNGG 5 cut(s) 417, 1109, 1147, 1329, 1531
BssMI GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
BssSI CACGAG 1 cut(s) 678
BssT1I CCWWGG 4 cut(s) 417, 1147, 1329, 1531
Bst2BI CACGAG 1 cut(s) 678
Bst2UI CCWGG 1 cut(s) 1110
Bst4CI ACNGT 2 cut(s) 650, 1781
Bst6I CTCTTC 2 cut(s) 596, 639
BstAUI TGTACA 1 cut(s) 264
BstC8I GCNNGC 7 cut(s) 208, 485, 564, 1160, 1164, 1668, 1740
BstDEI CTNAG 9 cut(s) 60, 135, 212, 315, 390, 708, 1084, 1344, 1709
BstENI CCTNNNNNAGG 1 cut(s) 1167
BstF5I GGATG 4 cut(s) 31, 373, 1024, 1780
BstHHI GCGC 1 cut(s) 1692
BstKTI GATC 9 cut(s) 66, 524, 718, 796, 841, 1012, 1384, 1604, 1708
BstMAI GTCTC 2 cut(s) 1380, 1488
BstMBI GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
BstMWI GCNNNNNNNGC 8 cut(s) 563, 808, 939, 979, 1079, 1259, 1292, 1340
BstNI CCWGG 1 cut(s) 1110
BstNSI RCATGY 1 cut(s) 487
BstPAI GACNNNNGTC 1 cut(s) 1500
BstSCI CCNGG 1 cut(s) 1108
BstSFI CTRYAG 2 cut(s) 582, 1634
BstV1I GCAGC 1 cut(s) 991
BstV2I GAAGAC 1 cut(s) 359
BstX2I RGATCY 1 cut(s) 521
BstYI RGATCY 1 cut(s) 521
Bsu36I CCTNAGG 1 cut(s) 212
BsuRI GGCC 2 cut(s) 611, 1152
BtgZI GCGATG 1 cut(s) 285
BtrI CACGTC 1 cut(s) 1673
BtsCI GGATG 4 cut(s) 31, 373, 1024, 1780
BtsI GCAGTG 2 cut(s) 940, 1281
BtsIMutI CAGTG 2 cut(s) 940, 1281
BveI ACCTGC 1 cut(s) 1511
Cac8I GCNNGC 7 cut(s) 208, 485, 564, 1160, 1164, 1668, 1740
CfoI GCGC 1 cut(s) 1692
Cfr10I RCCGGY 2 cut(s) 158, 611
Cfr13I GGNCC 6 cut(s) 182, 683, 740, 763, 1151, 1325
Csp6I GTAC 8 cut(s) 98, 221, 265, 276, 546, 1047, 1076, 1754
CviAII CATG 9 cut(s) 484, 554, 817, 862, 898, 1249, 1432, 1447, 1513
CviQI GTAC 8 cut(s) 98, 221, 265, 276, 546, 1047, 1076, 1754
DdeI CTNAG 9 cut(s) 60, 135, 212, 315, 390, 708, 1084, 1344, 1709
DpnI GATC 9 cut(s) 65, 523, 717, 795, 840, 1011, 1383, 1603, 1707
DpnII GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
DraI TTTAAA 1 cut(s) 300
Eam1104I CTCTTC 2 cut(s) 596, 639
EarI CTCTTC 2 cut(s) 596, 639
Eco130I CCWWGG 4 cut(s) 417, 1147, 1329, 1531
Eco47I GGWCC 5 cut(s) 182, 683, 740, 763, 1325
Eco57I CTGAAG 6 cut(s) 5, 279, 825, 1014, 1296, 1617
Eco81I CCTNAGG 1 cut(s) 212
Eco88I CYCGRG 2 cut(s) 478, 534
EcoNI CCTNNNNNAGG 1 cut(s) 1167
EcoO109I RGGNCCY 2 cut(s) 182, 1325
EcoRII CCWGG 1 cut(s) 1108
EcoT14I CCWWGG 4 cut(s) 417, 1147, 1329, 1531
EcoT22I ATGCAT 1 cut(s) 444
ErhI CCWWGG 4 cut(s) 417, 1147, 1329, 1531
FaeI CATG 9 cut(s) 487, 557, 820, 865, 901, 1252, 1435, 1450, 1516
FalI AAGNNNNNCTT 4 cut(s) 1467, 1499, 1559, 1591
FaqI GGGAC 4 cut(s) 150, 195, 614, 1311
FatI CATG 9 cut(s) 483, 553, 816, 861, 897, 1248, 1431, 1446, 1512
FauI CCCGC 2 cut(s) 1288, 1315
FauNDI CATATG 1 cut(s) 1197
FbaI TGATCA 2 cut(s) 793, 1009
Fnu4HI GCNGC 3 cut(s) 5, 488, 980
FokI GGATG 4 cut(s) 38, 380, 1011, 1787
Fsp4HI GCNGC 3 cut(s) 5, 488, 980
FspBI CTAG 7 cut(s) 173, 207, 279, 1179, 1244, 1335, 1757
FspI TGCGCA 1 cut(s) 1691
GlaI GCGC 1 cut(s) 1691
GluI GCNGC 3 cut(s) 5, 488, 980
GsaI CCCAGC 2 cut(s) 172, 1158
GsuI CTGGAG 1 cut(s) 672
HaeIII GGCC 2 cut(s) 611, 1152
HapII CCGG 2 cut(s) 159, 612
HhaI GCGC 1 cut(s) 1692
Hin1II CATG 9 cut(s) 487, 557, 820, 865, 901, 1252, 1435, 1450, 1516
Hin6I GCGC 1 cut(s) 1690
HinP1I GCGC 1 cut(s) 1690
HincII GTYRAC 1 cut(s) 1176
HindII GTYRAC 1 cut(s) 1176
HindIII AAGCTT 1 cut(s) 70
HinfI GANTC 8 cut(s) 459, 472, 710, 749, 1091, 1213, 1235, 1760
HpaII CCGG 2 cut(s) 159, 612
HphI GGTGA 8 cut(s) 27, 334, 371, 610, 845, 884, 920, 1135
Hpy166II GTNNAC 5 cut(s) 98, 265, 1078, 1176, 1754
Hpy188III TCNNGA 8 cut(s) 23, 534, 734, 1013, 1385, 1505, 1676, 1700
Hpy8I GTNNAC 5 cut(s) 98, 265, 1078, 1176, 1754
Hpy99I CGWCG 1 cut(s) 642
HpyAV CCTTC 9 cut(s) 29, 319, 681, 851, 1038, 1320, 1592, 1654, 1765
HpyCH4III ACNGT 2 cut(s) 650, 1781
HpyCH4IV ACGT 2 cut(s) 1672, 1728
HpyCH4V TGCA 8 cut(s) 374, 442, 557, 979, 1262, 1565, 1636, 1670
HpyF10VI GCNNNNNNNGC 8 cut(s) 563, 808, 939, 979, 1079, 1259, 1292, 1340
HpyF3I CTNAG 9 cut(s) 60, 135, 212, 315, 390, 708, 1084, 1344, 1709
HpySE526I ACGT 2 cut(s) 1672, 1728
Hsp92II CATG 9 cut(s) 487, 557, 820, 865, 901, 1252, 1435, 1450, 1516
HspAI GCGC 1 cut(s) 1690
KflI GGGWCCC 1 cut(s) 1325
Ksp22I TGATCA 2 cut(s) 793, 1009
Kzo9I GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
LmnI GCTCC 2 cut(s) 1015, 1663
Lsp1109I GCAGC 1 cut(s) 991
LweI GCATC 3 cut(s) 361, 949, 1033
MaeI CTAG 7 cut(s) 173, 207, 279, 1179, 1244, 1335, 1757
MaeII ACGT 2 cut(s) 1672, 1728
MaeIII GTNAC 5 cut(s) 644, 833, 1123, 1724, 1781
MalI GATC 9 cut(s) 65, 523, 717, 795, 840, 1011, 1383, 1603, 1707
MboI GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
MflI RGATCY 1 cut(s) 521
MluCI AATT 8 cut(s) 117, 464, 772, 965, 1305, 1377, 1623, 1717
MlyI GAGTC 4 cut(s) 468, 719, 1100, 1244
MmeI TCCRAC 2 cut(s) 767, 1524
Mph1103I ATGCAT 1 cut(s) 444
MseI TTAA 9 cut(s) 54, 299, 822, 1371, 1376, 1419, 1527, 1553, 1620
MspI CCGG 2 cut(s) 159, 612
MspR9I CCNGG 1 cut(s) 1110
Mva1269I GAATGC 1 cut(s) 574
MvaI CCWGG 1 cut(s) 1110
MwoI GCNNNNNNNGC 8 cut(s) 563, 808, 939, 979, 1079, 1259, 1292, 1340
NdeI CATATG 1 cut(s) 1197
NdeII GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
NheI GCTAGC 1 cut(s) 206
NlaIII CATG 9 cut(s) 487, 557, 820, 865, 901, 1252, 1435, 1450, 1516
NlaIV GGNNCC 5 cut(s) 183, 741, 1153, 1326, 1327
NmuCI GTSAC 4 cut(s) 833, 1123, 1724, 1781
NsbI TGCGCA 1 cut(s) 1691
NsiI ATGCAT 1 cut(s) 444
NspI RCATGY 1 cut(s) 487
PaeI GCATGC 1 cut(s) 487
PcsI WCGNNNNNNNCGW 1 cut(s) 646
PctI GAATGC 1 cut(s) 574
PfeI GAWTC 4 cut(s) 472, 749, 1213, 1760
PkrI GCNGC 3 cut(s) 6, 489, 981
PleI GAGTC 4 cut(s) 467, 718, 1099, 1243
PpsI GAGTC 4 cut(s) 467, 718, 1099, 1243
PpuMI RGGWCCY 2 cut(s) 182, 1325
PshAI GACNNNNGTC 1 cut(s) 1500
Psp5II RGGWCCY 2 cut(s) 182, 1325
Psp6I CCWGG 1 cut(s) 1108
PspFI CCCAGC 2 cut(s) 168, 1154
PspGI CCWGG 1 cut(s) 1108
PspN4I GGNNCC 5 cut(s) 183, 741, 1153, 1326, 1327
PspPI GGNCC 6 cut(s) 182, 683, 740, 763, 1151, 1325
PspPPI RGGWCCY 2 cut(s) 182, 1325
PstI CTGCAG 1 cut(s) 1638
PsuI RGATCY 1 cut(s) 521
RsaI GTAC 8 cut(s) 99, 222, 266, 277, 547, 1048, 1077, 1755
RsaNI GTAC 8 cut(s) 98, 221, 265, 276, 546, 1047, 1076, 1754
SaqAI TTAA 9 cut(s) 54, 299, 822, 1371, 1376, 1419, 1527, 1553, 1620
SatI GCNGC 3 cut(s) 5, 488, 980
Sau3AI GATC 9 cut(s) 63, 521, 715, 793, 838, 1009, 1381, 1601, 1705
Sau96I GGNCC 6 cut(s) 182, 683, 740, 763, 1151, 1325
ScaI AGTACT 1 cut(s) 1048
SchI GAGTC 4 cut(s) 468, 719, 1100, 1244
ScrFI CCNGG 1 cut(s) 1110
SfaNI GCATC 3 cut(s) 361, 949, 1033
SfcI CTRYAG 2 cut(s) 582, 1634
SinI GGWCC 5 cut(s) 182, 683, 740, 763, 1325
SmlI CTYRAG 3 cut(s) 732, 1676, 1698
SmoI CTYRAG 3 cut(s) 732, 1676, 1698
SpeI ACTAGT 1 cut(s) 1178
SphI GCATGC 1 cut(s) 487
Sse9I AATT 8 cut(s) 117, 464, 772, 965, 1305, 1377, 1623, 1717
SsiI CCGC 8 cut(s) 4, 122, 488, 962, 1073, 1295, 1322, 1356
SspMI CTAG 7 cut(s) 173, 207, 279, 1179, 1244, 1335, 1757
StyD4I CCNGG 1 cut(s) 1108
StyI CCWWGG 4 cut(s) 417, 1147, 1329, 1531
TaaI ACNGT 2 cut(s) 650, 1781
TaiI ACGT 2 cut(s) 1675, 1731
TaqI TCGA 5 cut(s) 640, 849, 885, 1216, 1384
TasI AATT 8 cut(s) 117, 464, 772, 965, 1305, 1377, 1623, 1717
TatI WGTACW 5 cut(s) 97, 220, 264, 1046, 1753
TauI GCSGC 2 cut(s) 7, 490
TfiI GAWTC 4 cut(s) 472, 749, 1213, 1760
Tru1I TTAA 9 cut(s) 54, 299, 822, 1371, 1376, 1419, 1527, 1553, 1620
Tru9I TTAA 9 cut(s) 54, 299, 822, 1371, 1376, 1419, 1527, 1553, 1620
TscAI CASTG 2 cut(s) 940, 1288
TseFI GTSAC 4 cut(s) 833, 1123, 1724, 1781
TseI GCWGC 1 cut(s) 979
Tsp45I GTSAC 4 cut(s) 833, 1123, 1724, 1781
TspDTI ATGAA 3 cut(s) 870, 1316, 1501
TspGWI ACGGA 2 cut(s) 471, 735
TspRI CASTG 2 cut(s) 940, 1288
VpaK11BI GGWCC 5 cut(s) 182, 683, 740, 763, 1325
XagI CCTNNNNNAGG 1 cut(s) 1167
XapI RAATTY 3 cut(s) 965, 1305, 1623
XceI RCATGY 1 cut(s) 487
XcmI CCANNNNNNNNNTGG 2 cut(s) 199, 1466
XspI CTAG 7 cut(s) 173, 207, 279, 1179, 1244, 1335, 1757
ZrmI AGTACT 1 cut(s) 1048
Zsp2I ATGCAT 1 cut(s) 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.