Rw7G031160

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000153
Physical Location & Seq
Forward (+)
44435102 .. 44437309
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G031160.1

Sequence Viewer

Length: 1818 bp
ATGGCACAAGCATCTGAGTCTTCTCAGCCTACTGAACTTCATGACCACCACTTCTCACTGGAAGATGGTCTCATTTCTGCTTCCACCGCGGGGGCCCGTGAGGGTAGCTCAGAGGAGGCATCTCATGAGTTTTCTGGGTGCTTTGTCTCTCCCAAGTTCATATCCAGGTTGCTTATTGAGCGGGGAGAGTACCCTGCAGTGCCTATATGTTTCCGGTATCCTGCAAGGACCCCTGCGGGTTGGCCTGAATGGGTCAGCTTTGAGGTACAACAGGAAGAGCTTGAAGAGGCCCTTATTGGAGCTGGAGTGAAGATTTCACTGTTTATTTCCGGCTTTTGTGAGGTTTACAAAGATGACATTTGCCTTCGCCATGTGGTGCGAAGATGGAGTCCTGAAACTCACACGTTCATATGGCCTTGGGGGGAATTTACTCCTTCTTTGGAAGATGTTTGCAATATTATGCGAATCCCTATTGTTGGGGATGGTAATCCTTTCAAGATAGAGCTAAATAAAGTGCAGAAGAAGAAGCTGCAGATTCTGAAAAGGGGTGCTTATGATTCCAAAGAAGTGTTCCGTTTTTGTTACTGGGTGAGGCACTTTTGGGGCTCGATGGACGGAGGCAAGTTTAAGCATGGTGCAGATTTTCCCTATGAGAATGTGCAGCTGCGAGTCTTCCCGTTGGCCATTATGCTAGCAGCCGGTACTTGTTTTCCGCTCGCTCCTCTCTTCCTTGGTCATCTATATAGGAAACTTGATCAGATTTCAAAGGATGATAAAGAAGGTGCGGGGCAATGGTTAAGAAGGAAGGCCAAGAAGGGTGCATTTAGGCCTGTTGTTTTGGATGACATCGGGAAATTCAATTTCAGACCATATTTCGCTGCTCATGGCTTCCAGACACTTCCCTTCTTTTACCCAGAGGGTAACTCATCACCTGCGCAGTCCTTAATAGCATGTGGTGATTTCTTTGACCCCGTGATGGAGAAGTACTCTCCTTATAGAGTTAAGAGGCAATTTGGCATCGACCAGGATGTGCCATCGCATCTATCCTATGGTGGACATCTTGGGGATTGCATCATGGGTTTCACTCGGACAGATGGTATTTCCTGCAGGGGTATGCTCTCTGATAGTCTCGGGAAGAAAGGCTGTGTTGGATCCCCTACATCCACATTCTTGAGGTTTTGGGAGTTGCGGCGGTGCGAGTTTAGGAGACTTAACCTTCCCTATACTGAGGTATACTCAAATGGTATAAAGCGTGTGGTTGGTCACCTCAAGGGTGGTAAAAGTGGAGATGATCCTGAAGTAGGGTTGCCAGCTACCGGAGTGGAGAAAGGTAGCAAGAGCACTACAAAGGGTAAAGTCAGGGCTTCCGAGGATGGAGGGGATGGCAGAAGGAAGGTTTGTCGCTTCAAACCTAAGGTAGCCAAAGATCGCATCCCTCCTCCAGTAGTCAAGAGTGCCTTTGGTGTTAAAGGGAAGAAGAGGGAAGCTGCCTCTACCCTGAGACCAAGTGGGGTTATTAAGAGGAAGGTTGCAGATGATGCCTCACCTGTCGTCCTTAGGCGGAGTTCTCGTGTGGCCAACATGAATTTTTGTAAACGTAAGCCGTCGTCCAAGGGTGATGTTTATGTTGATCTTAGTGATGGGCCAAGTGTCGACGGGGATAGTAGCCCCTTGAGTGATGAGGAGAATGAGTCTGATACTTATGAGGGAAAGACCTGCGATGGTGATAGCCAGGTATCCTTTTCTGGCCCGACATCCTTTCCCTTTTTTTTTTGGTTGCATGGCGTGCGATTTACTTGTTATTTTCTTTCCTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

605

Amino Acids

67.56

Weight (kDa)

8.87

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 110 - 258 1.1e-15 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 940
Acc16I TGCGCA 1 cut(s) 936
Acc36I ACCTGC 2 cut(s) 940, 1724
AccBSI CCGCTC 2 cut(s) 181, 715
AccI GTMKAC 2 cut(s) 1233, 1653
AccII CGCG 1 cut(s) 89
AciI CCGC 9 cut(s) 87, 89, 181, 236, 713, 785, 1189, 1192, 1561
AclWI GGATC 3 cut(s) 1146, 1159, 1286
AcoI YGGCCR 2 cut(s) 681, 1575
AcsI RAATTY 3 cut(s) 425, 854, 1585
AcuI CTGAAG 1 cut(s) 1317
AfaI GTAC 4 cut(s) 191, 267, 703, 986
AfiI CCNNNNNNNGG 5 cut(s) 90, 476, 976, 1301, 1316
AflIII ACRYGT 1 cut(s) 402
AgsI TTSAA 5 cut(s) 284, 496, 765, 859, 1408
AjnI CCWGG 3 cut(s) 164, 1023, 1731
AjuI GAANNNNNNNTTGG 2 cut(s) 554, 586
AluBI AGCT 9 cut(s) 108, 258, 280, 302, 505, 529, 664, 1313, 1487
AluI AGCT 9 cut(s) 108, 258, 280, 302, 505, 529, 664, 1313, 1487
Alw21I GWGCWC 1 cut(s) 1343
Alw26I GTCTC 5 cut(s) 74, 151, 1133, 1201, 1495
AlwI GGATC 3 cut(s) 1146, 1159, 1286
AlwNI CAGNNNCTG 1 cut(s) 538
Ama87I CYCGRG 1 cut(s) 1130
ApaI GGGCCC 1 cut(s) 97
ApeKI GCWGC 6 cut(s) 529, 661, 664, 695, 878, 1487
ApoI RAATTY 3 cut(s) 425, 854, 1585
ArsI GACNNNNNNTTYG 2 cut(s) 373, 405
AspLEI GCGC 1 cut(s) 937
AspS9I GGNCC 6 cut(s) 93, 94, 228, 289, 1643, 1748
AsuHPI GGTGA 7 cut(s) 601, 921, 968, 1256, 1536, 1628, 1736
AsuNHI GCTAGC 1 cut(s) 691
AvaI CYCGRG 1 cut(s) 1130
AvaII GGWCC 1 cut(s) 228
AxyI CCTNAGG 2 cut(s) 1413, 1556
BaeGI GKGCMC 1 cut(s) 97
BalI TGGCCA 2 cut(s) 683, 1577
BamHI GGATCC 1 cut(s) 1151
BanII GRGCYC 2 cut(s) 97, 608
BauI CACGAG 1 cut(s) 1569
BbsI GAAGAC 2 cut(s) 12, 664
Bbv12I GWGCWC 1 cut(s) 1343
BbvI GCAGC 6 cut(s) 516, 651, 673, 707, 865, 1474
BceAI ACGGC 1 cut(s) 1588
BciT130I CCWGG 3 cut(s) 166, 1025, 1733
BciVI GTATCC 2 cut(s) 228, 1747
BclI TGATCA 1 cut(s) 754
BcoDI GTCTC 5 cut(s) 74, 151, 1133, 1201, 1495
BfaI CTAG 1 cut(s) 692
BfmI CTRYAG 3 cut(s) 195, 530, 1105
BfuAI ACCTGC 2 cut(s) 940, 1724
BfuI GTATCC 2 cut(s) 228, 1747
BisI GCNGC 7 cut(s) 530, 662, 665, 696, 879, 1190, 1488
BlsI GCNGC 7 cut(s) 531, 663, 666, 697, 880, 1191, 1489
BmcAI AGTACT 1 cut(s) 986
Bme1390I CCNGG 3 cut(s) 166, 1025, 1733
Bme18I GGWCC 1 cut(s) 228
BmeT110I CYCGRG 1 cut(s) 1130
BmgT120I GGNCC 6 cut(s) 93, 94, 228, 289, 1643, 1748
BmiI GGNNCC 4 cut(s) 94, 95, 230, 1153
BmrFI CCNGG 3 cut(s) 166, 1025, 1733
BmrI ACTGGG 1 cut(s) 595
BmsI GCATC 7 cut(s) 20, 128, 1026, 1048, 1080, 1440, 1528
BmtI GCTAGC 1 cut(s) 695
BmuI ACTGGG 1 cut(s) 595
BpiI GAAGAC 2 cut(s) 12, 664
BplI GAGNNNNNCTC 8 cut(s) 92, 124, 908, 940, 971, 1003, 1220, 1252
BpmI CTGGAG 2 cut(s) 324, 1425
BpuEI CTTGAG 3 cut(s) 1192, 1253, 1693
BsaBI GATNNNNATC 1 cut(s) 486
BsaI GGTCTC 2 cut(s) 74, 1495
BsaJI CCNNGG 5 cut(s) 87, 416, 730, 1368, 1611
BsaWI WCCGGW 2 cut(s) 213, 1316
BsaXI ACNNNNNCTCC 6 cut(s) 291, 321, 1555, 1585, 1676, 1706
Bsc4I CCNNNNNNNGG 5 cut(s) 90, 476, 976, 1301, 1316
Bse118I RCCGGY 1 cut(s) 698
Bse1I ACTGG 3 cut(s) 63, 590, 1442
Bse21I CCTNAGG 2 cut(s) 1413, 1556
Bse3DI GCAATG 1 cut(s) 797
Bse8I GATNNNNATC 1 cut(s) 486
BseBI CCWGG 3 cut(s) 166, 1025, 1733
BseDI CCNNGG 5 cut(s) 87, 416, 730, 1368, 1611
BseGI GGATG 9 cut(s) 487, 775, 847, 1033, 1160, 1378, 1387, 1431, 1754
BseJI GATNNNNATC 1 cut(s) 486
BseLI CCNNNNNNNGG 5 cut(s) 90, 476, 976, 1301, 1316
BseMI GCAATG 1 cut(s) 797
BseMII CTCAG 5 cut(s) 6, 38, 123, 1218, 1490
BseNI ACTGG 3 cut(s) 63, 590, 1442
BseRI GAGGAG 4 cut(s) 128, 711, 1428, 1697
BseSI GKGCMC 1 cut(s) 97
BseXI GCAGC 6 cut(s) 516, 651, 673, 707, 865, 1474
BsgI GTGCAG 3 cut(s) 536, 657, 680
Bsh1236I CGCG 1 cut(s) 89
BsiHKAI GWGCWC 1 cut(s) 1343
BsiHKCI CYCGRG 1 cut(s) 1130
BsiSI CCGG 4 cut(s) 214, 330, 699, 1317
BslI CCNNNNNNNGG 5 cut(s) 90, 476, 976, 1301, 1316
BsmAI GTCTC 5 cut(s) 74, 151, 1133, 1201, 1495
Bso31I GGTCTC 2 cut(s) 74, 1495
BsoBI CYCGRG 1 cut(s) 1130
Bsp120I GGGCCC 1 cut(s) 93
Bsp1286I GDGCHC 3 cut(s) 97, 608, 1343
Bsp143I GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
BspACI CCGC 9 cut(s) 87, 89, 181, 236, 713, 785, 1189, 1192, 1561
BspCNI CTCAG 5 cut(s) 7, 37, 122, 1219, 1491
BspFNI CGCG 1 cut(s) 89
BspHI TCATGA 2 cut(s) 40, 124
BspLI GGNNCC 4 cut(s) 94, 95, 230, 1153
BspMAI CTGCAG 3 cut(s) 199, 534, 1109
BspMI ACCTGC 2 cut(s) 940, 1724
BspOI GCTAGC 1 cut(s) 695
BspPI GGATC 3 cut(s) 1146, 1159, 1286
BspQI GCTCTTC 1 cut(s) 270
BspTNI GGTCTC 2 cut(s) 74, 1495
BsrBI CCGCTC 2 cut(s) 181, 715
BsrDI GCAATG 1 cut(s) 797
BsrFI RCCGGY 1 cut(s) 698
BsrI ACTGG 3 cut(s) 63, 590, 1442
BssAI RCCGGY 1 cut(s) 698
BssECI CCNNGG 5 cut(s) 87, 416, 730, 1368, 1611
BssMI GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
BssNAI GTATAC 1 cut(s) 1234
BssSI CACGAG 1 cut(s) 1569
BssT1I CCWWGG 3 cut(s) 416, 730, 1611
Bst1107I GTATAC 1 cut(s) 1234
Bst2BI CACGAG 1 cut(s) 1569
Bst2UI CCWGG 3 cut(s) 166, 1025, 1733
Bst4CI ACNGT 1 cut(s) 321
Bst6I CTCTTC 4 cut(s) 270, 279, 731, 1472
BstAPI GCANNNNNTGC 2 cut(s) 1538, 1786
BstC8I GCNNGC 4 cut(s) 693, 717, 1311, 1787
BstDEI CTNAG 8 cut(s) 15, 24, 109, 1227, 1413, 1499, 1556, 1634
BstDSI CCRYGG 1 cut(s) 87
BstEII GGTNACC 1 cut(s) 1262
BstENI CCTNNNNNAGG 1 cut(s) 1299
BstF5I GGATG 9 cut(s) 487, 775, 847, 1033, 1160, 1378, 1387, 1431, 1754
BstFNI CGCG 1 cut(s) 89
BstHHI GCGC 1 cut(s) 937
BstKTI GATC 5 cut(s) 757, 1154, 1294, 1429, 1633
BstMAI GTCTC 5 cut(s) 74, 151, 1133, 1201, 1495
BstMBI GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
BstMWI GCNNNNNNNGC 4 cut(s) 86, 178, 1538, 1786
BstNI CCWGG 3 cut(s) 166, 1025, 1733
BstNSI RCATGY 1 cut(s) 954
BstPI GGTNACC 1 cut(s) 1262
BstSCI CCNGG 3 cut(s) 164, 1023, 1731
BstSFI CTRYAG 3 cut(s) 195, 530, 1105
BstSLI GKGCMC 1 cut(s) 97
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 6 cut(s) 516, 651, 673, 707, 865, 1474
BstV2I GAAGAC 2 cut(s) 12, 664
BstX2I RGATCY 1 cut(s) 1151
BstYI RGATCY 1 cut(s) 1151
BstZ17I GTATAC 1 cut(s) 1234
Bsu36I CCTNAGG 2 cut(s) 1413, 1556
BsuI GTATCC 2 cut(s) 228, 1747
BtgI CCRYGG 1 cut(s) 87
BtgZI GCGATG 2 cut(s) 1020, 1734
BtsCI GGATG 9 cut(s) 487, 775, 847, 1033, 1160, 1378, 1387, 1431, 1754
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 3 cut(s) 56, 204, 317
BveI ACCTGC 2 cut(s) 940, 1724
Cac8I GCNNGC 4 cut(s) 693, 717, 1311, 1787
CaiI CAGNNNCTG 1 cut(s) 538
CciI TCATGA 2 cut(s) 40, 124
CfoI GCGC 1 cut(s) 937
Cfr10I RCCGGY 1 cut(s) 698
Cfr13I GGNCC 6 cut(s) 93, 94, 228, 289, 1643, 1748
Cfr42I CCGCGG 1 cut(s) 90
Csp6I GTAC 4 cut(s) 190, 266, 702, 985
CviAII CATG 9 cut(s) 41, 125, 371, 632, 884, 951, 1075, 1582, 1781
CviQI GTAC 4 cut(s) 190, 266, 702, 985
DdeI CTNAG 8 cut(s) 15, 24, 109, 1227, 1413, 1499, 1556, 1634
DpnI GATC 5 cut(s) 756, 1153, 1293, 1428, 1632
DpnII GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
EaeI YGGCCR 2 cut(s) 681, 1575
Eam1104I CTCTTC 4 cut(s) 270, 279, 731, 1472
EarI CTCTTC 4 cut(s) 270, 279, 731, 1472
EciI GGCGGA 1 cut(s) 1576
Eco130I CCWWGG 3 cut(s) 416, 730, 1611
Eco147I AGGCCT 1 cut(s) 829
Eco24I GRGCYC 2 cut(s) 97, 608
Eco31I GGTCTC 2 cut(s) 74, 1495
Eco47I GGWCC 1 cut(s) 228
Eco57I CTGAAG 1 cut(s) 1317
Eco81I CCTNAGG 2 cut(s) 1413, 1556
Eco88I CYCGRG 1 cut(s) 1130
Eco91I GGTNACC 1 cut(s) 1262
EcoNI CCTNNNNNAGG 1 cut(s) 1299
EcoO109I RGGNCCY 3 cut(s) 93, 228, 289
EcoO65I GGTNACC 1 cut(s) 1262
EcoRII CCWGG 3 cut(s) 164, 1023, 1731
EcoT14I CCWWGG 3 cut(s) 416, 730, 1611
EcoT38I GRGCYC 2 cut(s) 97, 608
ErhI CCWWGG 3 cut(s) 416, 730, 1611
FaeI CATG 9 cut(s) 44, 128, 374, 635, 887, 954, 1078, 1585, 1784
FalI AAGNNNNNCTT 6 cut(s) 276, 308, 535, 567, 1442, 1474
FatI CATG 9 cut(s) 40, 124, 370, 631, 883, 950, 1074, 1581, 1780
FauI CCCGC 4 cut(s) 82, 174, 229, 778
FauNDI CATATG 1 cut(s) 410
FbaI TGATCA 1 cut(s) 754
FblI GTMKAC 2 cut(s) 1233, 1653
Fnu4HI GCNGC 7 cut(s) 530, 662, 665, 696, 879, 1190, 1488
FokI GGATG 9 cut(s) 494, 782, 854, 1040, 1147, 1385, 1394, 1418, 1741
FriOI GRGCYC 2 cut(s) 97, 608
Fsp4HI GCNGC 7 cut(s) 530, 662, 665, 696, 879, 1190, 1488
FspBI CTAG 1 cut(s) 692
FspI TGCGCA 1 cut(s) 936
GlaI GCGC 1 cut(s) 936
GluI GCNGC 7 cut(s) 530, 662, 665, 696, 879, 1190, 1488
GsuI CTGGAG 2 cut(s) 324, 1425
HapII CCGG 4 cut(s) 214, 330, 699, 1317
HhaI GCGC 1 cut(s) 937
Hin1II CATG 9 cut(s) 44, 128, 374, 635, 887, 954, 1078, 1585, 1784
Hin6I GCGC 1 cut(s) 935
HinP1I GCGC 1 cut(s) 935
HincII GTYRAC 1 cut(s) 1654
HindII GTYRAC 1 cut(s) 1654
HinfI GANTC 7 cut(s) 17, 388, 465, 535, 557, 669, 1691
HpaII CCGG 4 cut(s) 214, 330, 699, 1317
HphI GGTGA 7 cut(s) 601, 921, 968, 1256, 1536, 1628, 1736
Hpy166II GTNNAC 5 cut(s) 346, 1055, 1234, 1595, 1654
Hpy188I TCNGA 9 cut(s) 16, 112, 540, 759, 866, 1089, 1123, 1369, 1696
Hpy8I GTNNAC 5 cut(s) 346, 1055, 1234, 1595, 1654
Hpy99I CGWCG 2 cut(s) 1609, 1658
HpyCH4III ACNGT 1 cut(s) 321
HpyCH4IV ACGT 2 cut(s) 404, 1597
HpyF10VI GCNNNNNNNGC 4 cut(s) 86, 178, 1538, 1786
HpyF3I CTNAG 8 cut(s) 15, 24, 109, 1227, 1413, 1499, 1556, 1634
HpySE526I ACGT 2 cut(s) 404, 1597
Hsp92II CATG 9 cut(s) 44, 128, 374, 635, 887, 954, 1078, 1585, 1784
HspAI GCGC 1 cut(s) 935
Ksp22I TGATCA 1 cut(s) 754
KspI CCGCGG 1 cut(s) 90
Kzo9I GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
LguI GCTCTTC 1 cut(s) 270
LmnI GCTCC 2 cut(s) 299, 724
Lsp1109I GCAGC 6 cut(s) 516, 651, 673, 707, 865, 1474
LweI GCATC 7 cut(s) 20, 128, 1026, 1048, 1080, 1440, 1528
MaeI CTAG 1 cut(s) 692
MaeII ACGT 2 cut(s) 404, 1597
MaeIII GTNAC 3 cut(s) 581, 920, 1262
MalI GATC 5 cut(s) 756, 1153, 1293, 1428, 1632
MbiI CCGCTC 2 cut(s) 181, 715
MboI GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
MflI RGATCY 1 cut(s) 1151
MhlI GDGCHC 3 cut(s) 97, 608, 1343
MlsI TGGCCA 2 cut(s) 683, 1577
MluCI AATT 5 cut(s) 425, 854, 859, 1010, 1585
MluNI TGGCCA 2 cut(s) 683, 1577
MlyI GAGTC 4 cut(s) 26, 397, 678, 1700
MmeI TCCRAC 1 cut(s) 1129
Mox20I TGGCCA 2 cut(s) 683, 1577
MscI TGGCCA 2 cut(s) 683, 1577
MseI TTAA 7 cut(s) 627, 797, 944, 1002, 1212, 1467, 1518
Msp20I TGGCCA 2 cut(s) 683, 1577
MspA1I CMGCKG 2 cut(s) 89, 664
MspI CCGG 4 cut(s) 214, 330, 699, 1317
MspR9I CCNGG 3 cut(s) 166, 1025, 1733
MvaI CCWGG 3 cut(s) 166, 1025, 1733
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 4 cut(s) 86, 178, 1538, 1786
NdeI CATATG 1 cut(s) 410
NdeII GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
NheI GCTAGC 1 cut(s) 691
NlaIII CATG 9 cut(s) 44, 128, 374, 635, 887, 954, 1078, 1585, 1784
NlaIV GGNNCC 4 cut(s) 94, 95, 230, 1153
NmuCI GTSAC 1 cut(s) 1262
NsbI TGCGCA 1 cut(s) 936
NspI RCATGY 1 cut(s) 954
PagI TCATGA 2 cut(s) 40, 124
PaqCI CACCTGC 1 cut(s) 940
PceI AGGCCT 1 cut(s) 829
PciSI GCTCTTC 1 cut(s) 270
PfeI GAWTC 3 cut(s) 465, 535, 557
PkrI GCNGC 7 cut(s) 531, 663, 666, 697, 880, 1191, 1489
PleI GAGTC 4 cut(s) 25, 396, 677, 1699
PpsI GAGTC 4 cut(s) 25, 396, 677, 1699
PpuMI RGGWCCY 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 228
Psp6I CCWGG 3 cut(s) 164, 1023, 1731
PspEI GGTNACC 1 cut(s) 1262
PspGI CCWGG 3 cut(s) 164, 1023, 1731
PspN4I GGNNCC 4 cut(s) 94, 95, 230, 1153
PspOMI GGGCCC 1 cut(s) 93
PspPI GGNCC 6 cut(s) 93, 94, 228, 289, 1643, 1748
PspPPI RGGWCCY 1 cut(s) 228
PstI CTGCAG 3 cut(s) 199, 534, 1109
PstNI CAGNNNCTG 1 cut(s) 538
PsuI RGATCY 1 cut(s) 1151
PvuII CAGCTG 1 cut(s) 664
RsaI GTAC 4 cut(s) 191, 267, 703, 986
RsaNI GTAC 4 cut(s) 190, 266, 702, 985
SacII CCGCGG 1 cut(s) 90
SalI GTCGAC 1 cut(s) 1652
SapI GCTCTTC 1 cut(s) 270
SaqAI TTAA 7 cut(s) 627, 797, 944, 1002, 1212, 1467, 1518
SatI GCNGC 7 cut(s) 530, 662, 665, 696, 879, 1190, 1488
Sau3AI GATC 5 cut(s) 754, 1151, 1291, 1426, 1630
Sau96I GGNCC 6 cut(s) 93, 94, 228, 289, 1643, 1748
SbfI CCTGCAGG 1 cut(s) 1109
ScaI AGTACT 1 cut(s) 986
SchI GAGTC 4 cut(s) 26, 397, 678, 1700
ScrFI CCNGG 3 cut(s) 166, 1025, 1733
SdaI CCTGCAGG 1 cut(s) 1109
SduI GDGCHC 3 cut(s) 97, 608, 1343
SfaNI GCATC 7 cut(s) 20, 128, 1026, 1048, 1080, 1440, 1528
SfcI CTRYAG 3 cut(s) 195, 530, 1105
Sfr303I CCGCGG 1 cut(s) 90
SgrBI CCGCGG 1 cut(s) 90
SinI GGWCC 1 cut(s) 228
SmlI CTYRAG 3 cut(s) 1171, 1268, 1672
SmoI CTYRAG 3 cut(s) 1171, 1268, 1672
Sse8387I CCTGCAGG 1 cut(s) 1109
Sse9I AATT 5 cut(s) 425, 854, 859, 1010, 1585
SseBI AGGCCT 1 cut(s) 829
SsiI CCGC 9 cut(s) 87, 89, 181, 236, 713, 785, 1189, 1192, 1561
SspI AATATT 1 cut(s) 457
SspMI CTAG 1 cut(s) 692
StuI AGGCCT 1 cut(s) 829
StyD4I CCNGG 3 cut(s) 164, 1023, 1731
StyI CCWWGG 3 cut(s) 416, 730, 1611
TaaI ACNGT 1 cut(s) 321
TaiI ACGT 2 cut(s) 407, 1600
TaqI TCGA 3 cut(s) 608, 1020, 1653
TasI AATT 5 cut(s) 425, 854, 859, 1010, 1585
TatI WGTACW 1 cut(s) 984
TauI GCSGC 1 cut(s) 1192
TfiI GAWTC 3 cut(s) 465, 535, 557
Tru1I TTAA 7 cut(s) 627, 797, 944, 1002, 1212, 1467, 1518
Tru9I TTAA 7 cut(s) 627, 797, 944, 1002, 1212, 1467, 1518
TscAI CASTG 3 cut(s) 63, 204, 324
TseFI GTSAC 1 cut(s) 1262
TseI GCWGC 6 cut(s) 529, 661, 664, 695, 878, 1487
Tsp45I GTSAC 1 cut(s) 1262
TspDTI ATGAA 4 cut(s) 29, 148, 397, 1598
TspGWI ACGGA 2 cut(s) 563, 630
TspRI CASTG 3 cut(s) 63, 204, 324
VpaK11BI GGWCC 1 cut(s) 228
XagI CCTNNNNNAGG 1 cut(s) 1299
XapI RAATTY 3 cut(s) 425, 854, 1585
XceI RCATGY 1 cut(s) 954
XmiI GTMKAC 2 cut(s) 1233, 1653
XspI CTAG 1 cut(s) 692
ZrmI AGTACT 1 cut(s) 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.