Rmu_sc0006638.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006638.1
OG0000153
Physical Location & Seq
Reverse (-)
1 .. 1903
1903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006638.1_g000001.1.cds

Sequence Viewer

Length: 1710 bp
atggctcctgaggtgtatagtctagttgatcaccattttgtgcttgaggatggccttaagaaggagtttagaggcaattacgaaacttccagagatgtcagtcttgagcagattttcaggctactgattgagaggggggattatcctgcagttcccataaactttgagtatccctgtggtttagttacgggatggccacaatgggttgaccatgaactaaaagatgaggccacgagaatcagactttcagaggctgctgttctttcttccgtattcatctctgcccattatgatatcaacagggatgtggagtctcttcgtcatgtagttcgaagatggaatcctcacacgcatacctttgtttgttttacccctaccttggaggatgtcttgaatattatgaggcttcccattactggttccgtcaaccctcttggctttgattttgactcagagaagttgcaggttctcgtagaaggggcttccagtattaaaggaagtaagcgccgtttctcgaattgggtgaagcatttttggggtgttaccgaaaatggggtatttgtcccaggtaaaggctttgattctggttgccgtctggaagcgatgctatccctgtggctgatgaaatttgtcttcattgagttctcttatgagaatgtcgaagagcgcctgtttcccttggcaattgcaatagcagccggcagtaggtttcctttgggaccaatgttccttggtcacgtttatcgtctgcttgaccatattgttgttgatgagttggagagcattggtcggtgtggagtcactacattggtttctaccacctttttgcaagtatttatctgggaactgtttaaaggattaaagatggagcctctaaccatgagtctttctttggaattgtataataatgacaaggaaggcagcaagcaagcacagactgagtatttgccgccggtacttcctctgctgtatcgttggttcaaaaggagacaagataagactgtgttcaggctttttgtggaagccggtggtcctcagctaaagttgggacctattaccagctgtaggttagctagccccaaggctgtactgacttatgctgaaaagcataacctcacgtataccgaagtgtacagcgatggtactagaaaggtggttggctatttaaagggttttgaagctaagagggtgaagggagaggaaaagaagtgcgataagaagataggtgataagggtgatgcgagggagcacaacactcagaagcctattcggcgtttcaagcctaaggtggattttgacaagtttatgcatacgacccaacacggagtcaaactgatgatccccccaagcatgccgcttcaaaagaacaaggaggtcaagaagaaaagatctttaacaccccgagcaggtggtacttcccatgcaaagcaagcgaacgctaccaatttcgaagcgaagaaaagggtgaagagggaggctggcgcagattttgatgtccctcttcgtcgaagcaaccgtgtgaagtccaagagttctccttcccctcgtggtcctccagcttatcttgagttatctgattctgatcacggagagggttctcaagggggtccaactgattcttctaaagaggatcatactaattcttcaaaaggggcatctgatcatctgcctgaagtgcctcccatgattagccaagatagtgacaatccg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

570

Amino Acids

64.53

Weight (kDa)

8.97

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1397
Acc36I ACCTGC 2 cut(s) 454, 1397
AccI GTMKAC 1 cut(s) 1121
AciI CCGC 2 cut(s) 950, 1355
AclWI GGATC 2 cut(s) 1333, 1638
AcoI YGGCCR 1 cut(s) 194
AcsI RAATTY 1 cut(s) 626
AcuI CTGAAG 1 cut(s) 1692
AfaI GTAC 5 cut(s) 957, 1089, 1133, 1144, 1414
AfiI CCNNNNNNNGG 8 cut(s) 61, 379, 416, 552, 572, 705, 1065, 1406
AflII CTTAAG 1 cut(s) 56
AgsI TTSAA 6 cut(s) 394, 982, 1178, 1279, 1361, 1647
AjnI CCWGG 1 cut(s) 565
AjuI GAANNNNNNNTTGG 2 cut(s) 1603, 1635
AluBI AGCT 5 cut(s) 1039, 1062, 1073, 1181, 1559
AluI AGCT 5 cut(s) 1039, 1062, 1073, 1181, 1559
Alw21I GWGCWC 1 cut(s) 1251
Alw26I GTCTC 2 cut(s) 318, 982
AlwI GGATC 2 cut(s) 1333, 1638
AlwNI CAGNNNCTG 1 cut(s) 254
Ama87I CYCGRG 1 cut(s) 1401
AoxI GGCC 3 cut(s) 52, 194, 228
ApeKI GCWGC 3 cut(s) 254, 695, 921
ApoI RAATTY 1 cut(s) 626
ArsI GACNNNNNNTTYG 2 cut(s) 928, 960
AspLEI GCGC 3 cut(s) 507, 669, 1484
AspS9I GGNCC 5 cut(s) 719, 1031, 1049, 1550, 1607
AsuHPI GGTGA 6 cut(s) 23, 535, 1201, 1238, 1247, 1477
AsuII TTCGAA 2 cut(s) 331, 1449
AsuNHI GCTAGC 1 cut(s) 1073
AvaI CYCGRG 1 cut(s) 1401
AvaII GGWCC 5 cut(s) 719, 1031, 1049, 1550, 1607
AxyI CCTNAGG 2 cut(s) 9, 1284
BalI TGGCCA 1 cut(s) 196
BauI CACGAG 2 cut(s) 232, 1545
BbsI GAAGAC 1 cut(s) 625
Bbv12I GWGCWC 1 cut(s) 1251
BbvCI CCTCAGC 1 cut(s) 1035
BbvI GCAGC 3 cut(s) 241, 707, 933
BccI CCATC 5 cut(s) 44, 186, 330, 859, 1133
BceAI ACGGC 2 cut(s) 492, 576
BciT130I CCWGG 1 cut(s) 567
BciVI GTATCC 1 cut(s) 180
BclI TGATCA 3 cut(s) 28, 1582, 1660
BcoDI GTCTC 2 cut(s) 318, 982
BfaI CTAG 3 cut(s) 23, 1074, 1146
BfmI CTRYAG 2 cut(s) 147, 1063
BfoI RGCGCY 2 cut(s) 508, 670
BfrI CTTAAG 1 cut(s) 56
BfuAI ACCTGC 2 cut(s) 454, 1397
BfuI GTATCC 1 cut(s) 180
BglI GCCNNNNNGGC 1 cut(s) 1270
BglII AGATCT 1 cut(s) 1388
BisI GCNGC 5 cut(s) 255, 696, 922, 950, 1355
BlsI GCNGC 5 cut(s) 256, 697, 923, 951, 1356
Bme1390I CCNGG 1 cut(s) 567
Bme18I GGWCC 5 cut(s) 719, 1031, 1049, 1550, 1607
BmeT110I CYCGRG 1 cut(s) 1401
BmgT120I GGNCC 5 cut(s) 719, 1031, 1049, 1550, 1607
BmiI GGNNCC 6 cut(s) 6, 421, 720, 870, 1050, 1608
BmrFI CCNGG 1 cut(s) 567
BmsI GCATC 3 cut(s) 594, 1228, 1664
BmtI GCTAGC 1 cut(s) 1077
BpiI GAAGAC 1 cut(s) 625
BpmI CTGGAG 1 cut(s) 1539
Bpu10I CCTNAGC 1 cut(s) 1035
Bpu14I TTCGAA 2 cut(s) 331, 1449
BpuEI CTTGAG 4 cut(s) 65, 125, 1584, 1586
BsaAI YACGTR 1 cut(s) 1119
BsaBI GATNNNNATC 1 cut(s) 1581
BsaJI CCNNGG 5 cut(s) 378, 565, 678, 730, 1080
Bsc4I CCNNNNNNNGG 8 cut(s) 61, 379, 416, 552, 572, 705, 1065, 1406
Bse118I RCCGGY 3 cut(s) 698, 952, 1025
Bse1I ACTGG 2 cut(s) 421, 486
Bse21I CCTNAGG 2 cut(s) 9, 1284
Bse8I GATNNNNATC 1 cut(s) 1581
BseBI CCWGG 1 cut(s) 567
BseDI CCNNGG 5 cut(s) 378, 565, 678, 730, 1080
BseGI GGATG 4 cut(s) 55, 197, 310, 391
BseJI GATNNNNATC 1 cut(s) 1581
BseLI CCNNNNNNNGG 8 cut(s) 61, 379, 416, 552, 572, 705, 1065, 1406
BseMII CTCAG 4 cut(s) 465, 930, 1049, 1271
BseNI ACTGG 2 cut(s) 421, 486
BseXI GCAGC 3 cut(s) 241, 707, 933
BshFI GGCC 3 cut(s) 54, 196, 230
BsiHKAI GWGCWC 1 cut(s) 1251
BsiHKCI CYCGRG 1 cut(s) 1401
BsiSI CCGG 3 cut(s) 699, 953, 1026
BslFI GGGAC 4 cut(s) 548, 732, 1062, 1481
BslI CCNNNNNNNGG 8 cut(s) 61, 379, 416, 552, 572, 705, 1065, 1406
BsmAI GTCTC 2 cut(s) 318, 982
BsmFI GGGAC 4 cut(s) 548, 732, 1062, 1481
BsnI GGCC 3 cut(s) 54, 196, 230
BsoBI CYCGRG 1 cut(s) 1401
Bsp119I TTCGAA 2 cut(s) 331, 1449
Bsp1286I GDGCHC 1 cut(s) 1251
Bsp1407I TGTACA 1 cut(s) 1131
Bsp143I GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
BspACI CCGC 2 cut(s) 950, 1355
BspANI GGCC 3 cut(s) 54, 196, 230
BspCNI CTCAG 4 cut(s) 464, 931, 1048, 1270
BspLI GGNNCC 6 cut(s) 6, 421, 720, 870, 1050, 1608
BspMAI CTGCAG 1 cut(s) 151
BspMI ACCTGC 2 cut(s) 454, 1397
BspOI GCTAGC 1 cut(s) 1077
BspPI GGATC 2 cut(s) 1333, 1638
BspQI GCTCTTC 1 cut(s) 657
BspT104I TTCGAA 2 cut(s) 331, 1449
BspTI CTTAAG 1 cut(s) 56
BsrFI RCCGGY 3 cut(s) 698, 952, 1025
BsrGI TGTACA 1 cut(s) 1131
BsrI ACTGG 2 cut(s) 421, 486
BssAI RCCGGY 3 cut(s) 698, 952, 1025
BssECI CCNNGG 5 cut(s) 378, 565, 678, 730, 1080
BssMI GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
BssNAI GTATAC 1 cut(s) 1122
BssSI CACGAG 2 cut(s) 232, 1545
BssT1I CCWWGG 4 cut(s) 378, 678, 730, 1080
Bst1107I GTATAC 1 cut(s) 1122
Bst2BI CACGAG 2 cut(s) 232, 1545
Bst2UI CCWGG 1 cut(s) 567
Bst4CI ACNGT 3 cut(s) 849, 1003, 1517
Bst6I CTCTTC 4 cut(s) 321, 657, 1463, 1506
BstAFI CTTAAG 1 cut(s) 56
BstAUI TGTACA 1 cut(s) 1131
BstBAI YACGTR 1 cut(s) 1119
BstBI TTCGAA 2 cut(s) 331, 1449
BstC8I GCNNGC 7 cut(s) 700, 926, 930, 1075, 1352, 1431, 1480
BstDEI CTNAG 7 cut(s) 9, 451, 939, 1035, 1182, 1257, 1284
BstENI CCTNNNNNAGG 1 cut(s) 59
BstF5I GGATG 4 cut(s) 55, 197, 310, 391
BstH2I RGCGCY 2 cut(s) 508, 670
BstHHI GCGC 3 cut(s) 507, 669, 1484
BstKTI GATC 6 cut(s) 31, 1341, 1391, 1585, 1633, 1663
BstMAI GTCTC 2 cut(s) 318, 982
BstMBI GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
BstMWI GCNNNNNNNGC 5 cut(s) 695, 1270, 1279, 1430, 1675
BstNI CCWGG 1 cut(s) 567
BstNSI RCATGY 1 cut(s) 1354
BstSCI CCNGG 1 cut(s) 565
BstSFI CTRYAG 2 cut(s) 147, 1063
BstV1I GCAGC 3 cut(s) 241, 707, 933
BstV2I GAAGAC 1 cut(s) 625
BstX2I RGATCY 1 cut(s) 1388
BstYI RGATCY 1 cut(s) 1388
BstZ17I GTATAC 1 cut(s) 1122
Bsu36I CCTNAGG 2 cut(s) 9, 1284
BsuI GTATCC 1 cut(s) 180
BsuRI GGCC 3 cut(s) 54, 196, 230
BtgZI GCGATG 2 cut(s) 617, 1152
BtsCI GGATG 4 cut(s) 55, 197, 310, 391
BveI ACCTGC 2 cut(s) 454, 1397
Cac8I GCNNGC 7 cut(s) 700, 926, 930, 1075, 1352, 1431, 1480
CaiI CAGNNNCTG 1 cut(s) 254
CfoI GCGC 3 cut(s) 507, 669, 1484
Cfr10I RCCGGY 3 cut(s) 698, 952, 1025
Cfr13I GGNCC 5 cut(s) 719, 1031, 1049, 1550, 1607
Csp6I GTAC 5 cut(s) 956, 1088, 1132, 1143, 1413
CviAII CATG 6 cut(s) 212, 323, 880, 1351, 1421, 1684
CviQI GTAC 5 cut(s) 956, 1088, 1132, 1143, 1413
DdeI CTNAG 7 cut(s) 9, 451, 939, 1035, 1182, 1257, 1284
DpnI GATC 6 cut(s) 30, 1340, 1390, 1584, 1632, 1662
DpnII GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
DraI TTTAAA 2 cut(s) 853, 1167
EaeI YGGCCR 1 cut(s) 194
Eam1104I CTCTTC 4 cut(s) 321, 657, 1463, 1506
EarI CTCTTC 4 cut(s) 321, 657, 1463, 1506
Eco130I CCWWGG 4 cut(s) 378, 678, 730, 1080
Eco32I GATATC 1 cut(s) 295
Eco47I GGWCC 5 cut(s) 719, 1031, 1049, 1550, 1607
Eco57I CTGAAG 1 cut(s) 1692
Eco81I CCTNAGG 2 cut(s) 9, 1284
Eco88I CYCGRG 1 cut(s) 1401
EcoNI CCTNNNNNAGG 1 cut(s) 59
EcoO109I RGGNCCY 1 cut(s) 1049
EcoRII CCWGG 1 cut(s) 565
EcoRV GATATC 1 cut(s) 295
EcoT14I CCWWGG 4 cut(s) 378, 678, 730, 1080
EcoT22I ATGCAT 1 cut(s) 1311
ErhI CCWWGG 4 cut(s) 378, 678, 730, 1080
FaeI CATG 6 cut(s) 215, 326, 883, 1354, 1424, 1687
FaqI GGGAC 4 cut(s) 548, 732, 1062, 1481
FatI CATG 6 cut(s) 211, 322, 879, 1350, 1420, 1683
FbaI TGATCA 3 cut(s) 28, 1582, 1660
FblI GTMKAC 1 cut(s) 1121
Fnu4HI GCNGC 5 cut(s) 255, 696, 922, 950, 1355
FokI GGATG 4 cut(s) 62, 204, 317, 398
Fsp4HI GCNGC 5 cut(s) 255, 696, 922, 950, 1355
FspBI CTAG 3 cut(s) 23, 1074, 1146
GlaI GCGC 3 cut(s) 506, 668, 1483
GluI GCNGC 5 cut(s) 255, 696, 922, 950, 1355
GsuI CTGGAG 1 cut(s) 1539
HaeII RGCGCY 2 cut(s) 508, 670
HaeIII GGCC 3 cut(s) 54, 196, 230
HapII CCGG 3 cut(s) 699, 953, 1026
HhaI GCGC 3 cut(s) 507, 669, 1484
Hin1II CATG 6 cut(s) 215, 326, 883, 1354, 1424, 1687
Hin6I GCGC 3 cut(s) 505, 667, 1482
HinP1I GCGC 3 cut(s) 505, 667, 1482
HincII GTYRAC 2 cut(s) 208, 427
HindII GTYRAC 2 cut(s) 208, 427
HpaII CCGG 3 cut(s) 699, 953, 1026
HphI GGTGA 6 cut(s) 23, 535, 1201, 1238, 1247, 1477
Hpy166II GTNNAC 4 cut(s) 208, 427, 1122, 1132
Hpy188I TCNGA 7 cut(s) 242, 250, 454, 1260, 1576, 1582, 1660
Hpy188III TCNNGA 8 cut(s) 8, 90, 104, 391, 514, 596, 1378, 1565
Hpy8I GTNNAC 4 cut(s) 208, 427, 1122, 1132
Hpy99I CGWCG 1 cut(s) 1509
HpyAV CCTTC 5 cut(s) 55, 470, 911, 1186, 1548
HpyCH4III ACNGT 3 cut(s) 849, 1003, 1517
HpyCH4IV ACGT 2 cut(s) 738, 1118
HpyCH4V TGCA 6 cut(s) 149, 463, 689, 829, 1309, 1424
HpyF10VI GCNNNNNNNGC 5 cut(s) 695, 1270, 1279, 1430, 1675
HpyF3I CTNAG 7 cut(s) 9, 451, 939, 1035, 1182, 1257, 1284
HpySE526I ACGT 2 cut(s) 738, 1118
Hsp92II CATG 6 cut(s) 215, 326, 883, 1354, 1424, 1687
HspAI GCGC 3 cut(s) 505, 667, 1482
KroI GCCGGC 1 cut(s) 698
KroNI GCCGGC 1 cut(s) 700
Ksp22I TGATCA 3 cut(s) 28, 1582, 1660
Kzo9I GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
LguI GCTCTTC 1 cut(s) 657
LmnI GCTCC 3 cut(s) 10, 868, 1246
Lsp1109I GCAGC 3 cut(s) 241, 707, 933
LweI GCATC 3 cut(s) 594, 1228, 1664
MaeI CTAG 3 cut(s) 23, 1074, 1146
MaeII ACGT 2 cut(s) 738, 1118
MaeIII GTNAC 5 cut(s) 184, 541, 734, 799, 1700
MalI GATC 6 cut(s) 30, 1340, 1390, 1584, 1632, 1662
MboI GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
MfeI CAATTG 1 cut(s) 684
MflI RGATCY 1 cut(s) 1388
MhlI GDGCHC 1 cut(s) 1251
MlsI TGGCCA 1 cut(s) 196
MluCI AATT 7 cut(s) 76, 517, 626, 684, 896, 1444, 1639
MluNI TGGCCA 1 cut(s) 196
MlyI GAGTC 5 cut(s) 320, 443, 807, 892, 1335
MmeI TCCRAC 2 cut(s) 756, 1634
Mox20I TGGCCA 1 cut(s) 196
Mph1103I ATGCAT 1 cut(s) 1311
MroNI GCCGGC 1 cut(s) 698
MscI TGGCCA 1 cut(s) 196
MseI TTAA 6 cut(s) 57, 492, 852, 860, 1166, 1394
Msp20I TGGCCA 1 cut(s) 196
MspA1I CMGCKG 1 cut(s) 1062
MspCI CTTAAG 1 cut(s) 56
MspI CCGG 3 cut(s) 699, 953, 1026
MspR9I CCNGG 1 cut(s) 567
MunI CAATTG 1 cut(s) 684
MvaI CCWGG 1 cut(s) 567
MwoI GCNNNNNNNGC 5 cut(s) 695, 1270, 1279, 1430, 1675
NaeI GCCGGC 1 cut(s) 700
NdeII GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
NgoMIV GCCGGC 1 cut(s) 698
NheI GCTAGC 1 cut(s) 1073
NlaIII CATG 6 cut(s) 215, 326, 883, 1354, 1424, 1687
NlaIV GGNNCC 6 cut(s) 6, 421, 720, 870, 1050, 1608
NmuCI GTSAC 3 cut(s) 734, 799, 1700
NsiI ATGCAT 1 cut(s) 1311
NspI RCATGY 1 cut(s) 1354
NspV TTCGAA 2 cut(s) 331, 1449
PaeI GCATGC 1 cut(s) 1354
PaqCI CACCTGC 1 cut(s) 1397
PciSI GCTCTTC 1 cut(s) 657
PcsI WCGNNNNNNNCGW 1 cut(s) 1513
PdiI GCCGGC 1 cut(s) 700
PfeI GAWTC 5 cut(s) 237, 340, 581, 1577, 1616
PkrI GCNGC 5 cut(s) 256, 697, 923, 951, 1356
PleI GAGTC 5 cut(s) 319, 443, 806, 891, 1334
PpsI GAGTC 5 cut(s) 319, 443, 806, 891, 1334
Ppu21I YACGTR 1 cut(s) 1119
PpuMI RGGWCCY 1 cut(s) 1049
Psp5II RGGWCCY 1 cut(s) 1049
Psp6I CCWGG 1 cut(s) 565
PspGI CCWGG 1 cut(s) 565
PspN4I GGNNCC 6 cut(s) 6, 421, 720, 870, 1050, 1608
PspPI GGNCC 5 cut(s) 719, 1031, 1049, 1550, 1607
PspPPI RGGWCCY 1 cut(s) 1049
PsrI GAACNNNNNNTAC 2 cut(s) 962, 994
PstI CTGCAG 1 cut(s) 151
PstNI CAGNNNCTG 1 cut(s) 254
PsuI RGATCY 1 cut(s) 1388
PvuII CAGCTG 1 cut(s) 1062
RsaI GTAC 5 cut(s) 957, 1089, 1133, 1144, 1414
RsaNI GTAC 5 cut(s) 956, 1088, 1132, 1143, 1413
SapI GCTCTTC 1 cut(s) 657
SaqAI TTAA 6 cut(s) 57, 492, 852, 860, 1166, 1394
SatI GCNGC 5 cut(s) 255, 696, 922, 950, 1355
Sau3AI GATC 6 cut(s) 28, 1338, 1388, 1582, 1630, 1660
Sau96I GGNCC 5 cut(s) 719, 1031, 1049, 1550, 1607
SchI GAGTC 5 cut(s) 320, 443, 807, 892, 1335
ScrFI CCNGG 1 cut(s) 567
SduI GDGCHC 1 cut(s) 1251
SfaNI GCATC 3 cut(s) 594, 1228, 1664
SfcI CTRYAG 2 cut(s) 147, 1063
SfuI TTCGAA 2 cut(s) 331, 1449
SinI GGWCC 5 cut(s) 719, 1031, 1049, 1550, 1607
SmlI CTYRAG 5 cut(s) 44, 56, 104, 1565, 1599
SmoI CTYRAG 5 cut(s) 44, 56, 104, 1565, 1599
SphI GCATGC 1 cut(s) 1354
Sse9I AATT 7 cut(s) 76, 517, 626, 684, 896, 1444, 1639
SsiI CCGC 2 cut(s) 950, 1355
SspI AATATT 1 cut(s) 397
SspMI CTAG 3 cut(s) 23, 1074, 1146
StyD4I CCNGG 1 cut(s) 565
StyI CCWWGG 4 cut(s) 378, 678, 730, 1080
TaaI ACNGT 3 cut(s) 849, 1003, 1517
TaiI ACGT 2 cut(s) 741, 1121
TaqI TCGA 5 cut(s) 331, 515, 660, 1449, 1507
TasI AATT 7 cut(s) 76, 517, 626, 684, 896, 1444, 1639
TatI WGTACW 2 cut(s) 1087, 1131
TauI GCSGC 2 cut(s) 952, 1357
TfiI GAWTC 5 cut(s) 237, 340, 581, 1577, 1616
Tru1I TTAA 6 cut(s) 57, 492, 852, 860, 1166, 1394
Tru9I TTAA 6 cut(s) 57, 492, 852, 860, 1166, 1394
TseFI GTSAC 3 cut(s) 734, 799, 1700
TseI GCWGC 3 cut(s) 254, 695, 921
Tsp45I GTSAC 3 cut(s) 734, 799, 1700
TspDTI ATGAA 4 cut(s) 228, 265, 625, 638
TspGWI ACGGA 4 cut(s) 259, 412, 1338, 1602
Vha464I CTTAAG 1 cut(s) 56
VpaK11BI GGWCC 5 cut(s) 719, 1031, 1049, 1550, 1607
XagI CCTNNNNNAGG 1 cut(s) 59
XapI RAATTY 1 cut(s) 626
XceI RCATGY 1 cut(s) 1354
XmiI GTMKAC 1 cut(s) 1121
XspI CTAG 3 cut(s) 23, 1074, 1146
Zsp2I ATGCAT 1 cut(s) 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.