Rmu_sc0002722.1_g000002

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002722.1
OG0000153
Physical Location & Seq
Reverse (-)
11269 .. 13376
2108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002722.1_g000002.1.cds

Sequence Viewer

Length: 1794 bp
atggcacaagcatctgagtcttctcagcctactgaacttcatgaccaccacttctcactagaagatggtctcattgctgcttccaccgcgggggactgtgaaggtagctcagaggaggcatctcatgagtattctgggtgctttgtttctcccaagttcatatccagctttgaggcagaacaggaaaagcttgaagaggcccttattggagctggagtgaagatttcactgtttatttccgtcttttgtgaggtttacaaagatgacatttgccttcgccatgtgggctcgacggatggaggcaagtttaggcatggtgcaggctttgaatctggctgcttggtggaggccatgtttgcttattggttgagcatgttcatctttgcggattttccctatgagaacgtgcagcagcgagtcttcccattggccattatgctagcagccggtacttgtttccctcttgctcctctcttccttggtcatctatataggaagcttgatcagatttcaaagggtgacaaagaaggtgcggggcagtatggcattgactctttagtatctagcttcttccttcaagtgtttatatgggagagattcgaaggttcggctgtggaacctgtaactcctgagtcccttcatcaacttgagggaggtaaaagagactttaatctagtaggattcccgttatgttgtagatgggtcagaaggaaggccaagaatggtgcatttaggcctgtcgttttggatgacattgggaaattcaatttcagaccatatttcactgctcatggcttccagacatttcctttcttttatccagagggtaactcatcaccgttcctagagccggttgagctgcttctaaccactagtgtgcagtccataatagcatgtggcgatttctttgaccccgtgatggagaagtattctcctcatagagttaagaggcaatttagcatcgaccaggatgtgccatcgcatctatcctacggtggacatcttggggattgcatcatgggtttcactcggacagatggtatttcctgcaggggtatgctctccgatagtctcgggaagaaagactgtgttggatcccctacatcaacattcttgagattttgggagttgcaacggtgcaagtttaagagatttgttcaaactggtgggactaggttgcgtccgaaagccactagtgagaacaagagactactccacagtagcgctgtcatgggtgtcatgtctagacttaaccttccctatactgaggtatactcgaatggtataaagcgtgtggttggtcacctcaagggtggtaaaagtggagacgatcctgaagtagagttgccagttgccggaatggagaaaggtagcaagagtgcaccaaagggtaaaggcagggcttccgaggatggaggagaaagtaaaaagaaggttctcttcaaacctaaggtggcaaaggatcgcatccctcttccaatggtcaagagtgcctttggtgttaaagtgatactgccatcgaatttggctggtgagaaagggaagaaaaggaaagctgcttctaccttgagaccgagtggggttactaagagaaaggctataggtgatgcctcacccgctgtccttaggcggagttctcgggttgccaacatgagcttttctaagcgtaaatcgtcatccaagggtgctgtttatgttgatcttagtgactcacccagcgatgatgggaagggtagcccccttagtgataacgtcaatgcacatgaggagaatgagtctgatgcttatgagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

597

Amino Acids

65.51

Weight (kDa)

8.51

Isoelectric Point (pI)

45.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1272
AccII CGCG 1 cut(s) 89
AciI CCGC 6 cut(s) 87, 89, 386, 533, 1617, 1630
AclWI GGATC 4 cut(s) 1089, 1102, 1325, 1470
AcoI YGGCCR 1 cut(s) 429
AcsI RAATTY 2 cut(s) 761, 1522
AcuI CTGAAG 1 cut(s) 1356
AfaI GTAC 1 cut(s) 451
AfeI AGCGCT 1 cut(s) 1225
AfiI CCNNNNNNNGG 4 cut(s) 90, 850, 919, 1355
AgsI TTSAA 7 cut(s) 194, 329, 513, 578, 766, 1160, 1444
AhlI ACTAGT 2 cut(s) 872, 1193
AjnI CCWGG 1 cut(s) 966
AleI CACNNNNGTG 1 cut(s) 875
AluBI AGCT 9 cut(s) 108, 168, 190, 212, 499, 567, 859, 1556, 1656
AluI AGCT 9 cut(s) 108, 168, 190, 212, 499, 567, 859, 1556, 1656
Alw21I GWGCWC 1 cut(s) 1384
Alw26I GTCTC 6 cut(s) 74, 657, 1076, 1201, 1320, 1564
Alw44I GTGCAC 1 cut(s) 1380
AlwI GGATC 4 cut(s) 1089, 1102, 1325, 1470
Ama87I CYCGRG 2 cut(s) 1073, 1638
Aor51HI AGCGCT 1 cut(s) 1225
AoxI GGCC 5 cut(s) 198, 348, 429, 714, 734
ApaLI GTGCAC 1 cut(s) 1380
ApeKI GCWGC 7 cut(s) 77, 336, 409, 412, 443, 859, 1556
ApoI RAATTY 2 cut(s) 761, 1522
AspLEI GCGC 1 cut(s) 1226
AspS9I GGNCC 1 cut(s) 199
AsuHPI GGTGA 7 cut(s) 530, 828, 1295, 1544, 1605, 1616, 1704
AsuII TTCGAA 1 cut(s) 600
AsuNHI GCTAGC 1 cut(s) 439
AvaI CYCGRG 2 cut(s) 1073, 1638
AxyI CCTNAGG 2 cut(s) 1449, 1625
BaeGI GKGCMC 1 cut(s) 1384
BalI TGGCCA 1 cut(s) 431
BamHI GGATCC 1 cut(s) 1094
BanII GRGCYC 1 cut(s) 290
BbsI GAAGAC 2 cut(s) 12, 412
Bbv12I GWGCWC 1 cut(s) 1384
BbvI GCAGC 7 cut(s) 64, 323, 421, 424, 455, 846, 1543
BccI CCATC 9 cut(s) 59, 290, 693, 913, 985, 1031, 1406, 1525, 1718
BciT130I CCWGG 1 cut(s) 968
BclI TGATCA 1 cut(s) 502
BcoDI GTCTC 6 cut(s) 74, 657, 1076, 1201, 1320, 1564
BcuI ACTAGT 2 cut(s) 872, 1193
BfaI CTAG 9 cut(s) 59, 440, 564, 674, 845, 873, 1173, 1194, 1245
BfmI CTRYAG 2 cut(s) 1048, 1599
BfoI RGCGCY 1 cut(s) 1227
BglI GCCNNNNNGGC 1 cut(s) 285
BisI GCNGC 7 cut(s) 78, 337, 410, 413, 444, 860, 1557
BlsI GCNGC 7 cut(s) 79, 338, 411, 414, 445, 861, 1558
Bme1390I CCNGG 1 cut(s) 968
BmeT110I CYCGRG 2 cut(s) 1073, 1638
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 2 cut(s) 618, 1096
BmrFI CCNGG 1 cut(s) 968
BmsI GCATC 8 cut(s) 20, 128, 969, 991, 1023, 1476, 1597, 1771
BmtI GCTAGC 1 cut(s) 443
BpiI GAAGAC 2 cut(s) 12, 412
BplI GAGNNNNNCTC 4 cut(s) 815, 847, 1259, 1291
BpmI CTGGAG 1 cut(s) 234
Bpu14I TTCGAA 1 cut(s) 600
BpuEI CTTGAG 4 cut(s) 668, 1135, 1292, 1588
BsaI GGTCTC 2 cut(s) 74, 1564
BsaJI CCNNGG 4 cut(s) 87, 478, 1407, 1680
BsaXI ACNNNNNCTCC 6 cut(s) 201, 231, 338, 368, 1760, 1790
Bsc4I CCNNNNNNNGG 4 cut(s) 90, 850, 919, 1355
Bse118I RCCGGY 2 cut(s) 446, 850
Bse1I ACTGG 2 cut(s) 1168, 1349
Bse21I CCTNAGG 2 cut(s) 1449, 1625
Bse3DI GCAATG 1 cut(s) 72
BseBI CCWGG 1 cut(s) 968
BseDI CCNNGG 4 cut(s) 87, 478, 1407, 1680
BseGI GGATG 6 cut(s) 301, 754, 976, 1417, 1467, 1676
BseLI CCNNNNNNNGG 4 cut(s) 90, 850, 919, 1355
BseMI GCAATG 1 cut(s) 72
BseMII CTCAG 5 cut(s) 6, 38, 123, 621, 1257
BseNI ACTGG 2 cut(s) 1168, 1349
BseRI GAGGAG 5 cut(s) 128, 459, 924, 1431, 1781
BseSI GKGCMC 1 cut(s) 1384
BseXI GCAGC 7 cut(s) 64, 323, 421, 424, 455, 846, 1543
BseYI CCCAGC 1 cut(s) 1715
BsgI GTGCAG 3 cut(s) 339, 428, 899
Bsh1236I CGCG 1 cut(s) 89
BshFI GGCC 5 cut(s) 200, 350, 431, 716, 736
BsiHKAI GWGCWC 1 cut(s) 1384
BsiHKCI CYCGRG 2 cut(s) 1073, 1638
BsiSI CCGG 3 cut(s) 447, 851, 1356
BslFI GGGAC 3 cut(s) 107, 619, 1183
BslI CCNNNNNNNGG 4 cut(s) 90, 850, 919, 1355
BsmAI GTCTC 6 cut(s) 74, 657, 1076, 1201, 1320, 1564
BsmBI CGTCTC 1 cut(s) 1320
BsmFI GGGAC 3 cut(s) 107, 619, 1183
BsnI GGCC 5 cut(s) 200, 350, 431, 716, 736
Bso31I GGTCTC 2 cut(s) 74, 1564
BsoBI CYCGRG 2 cut(s) 1073, 1638
Bsp119I TTCGAA 1 cut(s) 600
Bsp1286I GDGCHC 2 cut(s) 290, 1384
Bsp143I GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
BspACI CCGC 6 cut(s) 87, 89, 386, 533, 1617, 1630
BspANI GGCC 5 cut(s) 200, 350, 431, 716, 736
BspCNI CTCAG 5 cut(s) 7, 37, 122, 622, 1258
BspFNI CGCG 1 cut(s) 89
BspHI TCATGA 2 cut(s) 40, 124
BspLI GGNNCC 2 cut(s) 618, 1096
BspMAI CTGCAG 1 cut(s) 1052
BspOI GCTAGC 1 cut(s) 443
BspPI GGATC 4 cut(s) 1089, 1102, 1325, 1470
BspT104I TTCGAA 1 cut(s) 600
BspTNI GGTCTC 2 cut(s) 74, 1564
BsrDI GCAATG 1 cut(s) 72
BsrFI RCCGGY 2 cut(s) 446, 850
BsrI ACTGG 2 cut(s) 1168, 1349
BssAI RCCGGY 2 cut(s) 446, 850
BssECI CCNNGG 4 cut(s) 87, 478, 1407, 1680
BssMI GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
BssNAI GTATAC 1 cut(s) 1273
BssT1I CCWWGG 2 cut(s) 478, 1680
Bst1107I GTATAC 1 cut(s) 1273
Bst2UI CCWGG 1 cut(s) 968
Bst4CI ACNGT 7 cut(s) 98, 231, 840, 995, 1088, 1137, 1220
Bst6I CTCTTC 4 cut(s) 189, 479, 1445, 1479
BstBI TTCGAA 1 cut(s) 600
BstC8I GCNNGC 2 cut(s) 322, 441
BstDSI CCRYGG 1 cut(s) 87
BstEII GGTNACC 1 cut(s) 1301
BstF5I GGATG 6 cut(s) 301, 754, 976, 1417, 1467, 1676
BstFNI CGCG 1 cut(s) 89
BstH2I RGCGCY 1 cut(s) 1227
BstHHI GCGC 1 cut(s) 1226
BstKTI GATC 5 cut(s) 505, 1097, 1333, 1465, 1702
BstMAI GTCTC 6 cut(s) 74, 657, 1076, 1201, 1320, 1564
BstMBI GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
BstMWI GCNNNNNNNGC 5 cut(s) 86, 285, 356, 856, 1616
BstNI CCWGG 1 cut(s) 968
BstNSI RCATGY 2 cut(s) 376, 897
BstPI GGTNACC 1 cut(s) 1301
BstSCI CCNGG 1 cut(s) 966
BstSFI CTRYAG 2 cut(s) 1048, 1599
BstSLI GKGCMC 1 cut(s) 1384
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 7 cut(s) 64, 323, 421, 424, 455, 846, 1543
BstV2I GAAGAC 2 cut(s) 12, 412
BstX2I RGATCY 1 cut(s) 1094
BstYI RGATCY 1 cut(s) 1094
BstZ17I GTATAC 1 cut(s) 1273
Bsu36I CCTNAGG 2 cut(s) 1449, 1625
BsuRI GGCC 5 cut(s) 200, 350, 431, 716, 736
BtgI CCRYGG 1 cut(s) 87
BtgZI GCGATG 2 cut(s) 963, 1734
BtsCI GGATG 6 cut(s) 301, 754, 976, 1417, 1467, 1676
BtsI GCAGTG 1 cut(s) 783
BtsIMutI CAGTG 2 cut(s) 227, 783
Cac8I GCNNGC 2 cut(s) 322, 441
CciI TCATGA 2 cut(s) 40, 124
CfoI GCGC 1 cut(s) 1226
Cfr10I RCCGGY 2 cut(s) 446, 850
Cfr13I GGNCC 1 cut(s) 199
Cfr42I CCGCGG 1 cut(s) 90
CseI GACGC 1 cut(s) 1169
Csp6I GTAC 1 cut(s) 450
CviQI GTAC 1 cut(s) 450
DpnI GATC 5 cut(s) 504, 1096, 1332, 1464, 1701
DpnII GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
EaeI YGGCCR 1 cut(s) 429
Eam1104I CTCTTC 4 cut(s) 189, 479, 1445, 1479
EarI CTCTTC 4 cut(s) 189, 479, 1445, 1479
EciI GGCGGA 1 cut(s) 1645
Eco130I CCWWGG 2 cut(s) 478, 1680
Eco147I AGGCCT 1 cut(s) 736
Eco24I GRGCYC 1 cut(s) 290
Eco31I GGTCTC 2 cut(s) 74, 1564
Eco47III AGCGCT 1 cut(s) 1225
Eco57I CTGAAG 1 cut(s) 1356
Eco81I CCTNAGG 2 cut(s) 1449, 1625
Eco88I CYCGRG 2 cut(s) 1073, 1638
Eco91I GGTNACC 1 cut(s) 1301
EcoO109I RGGNCCY 1 cut(s) 199
EcoO65I GGTNACC 1 cut(s) 1301
EcoRII CCWGG 1 cut(s) 966
EcoT14I CCWWGG 2 cut(s) 478, 1680
EcoT38I GRGCYC 1 cut(s) 290
ErhI CCWWGG 2 cut(s) 478, 1680
Esp3I CGTCTC 1 cut(s) 1320
FalI AAGNNNNNCTT 6 cut(s) 186, 218, 1424, 1456, 1478, 1510
FaqI GGGAC 3 cut(s) 107, 619, 1183
FauI CCCGC 3 cut(s) 82, 526, 1624
FbaI TGATCA 1 cut(s) 502
FblI GTMKAC 1 cut(s) 1272
Fnu4HI GCNGC 7 cut(s) 78, 337, 410, 413, 444, 860, 1557
FokI GGATG 6 cut(s) 308, 761, 983, 1424, 1454, 1663
FriOI GRGCYC 1 cut(s) 290
Fsp4HI GCNGC 7 cut(s) 78, 337, 410, 413, 444, 860, 1557
FspBI CTAG 9 cut(s) 59, 440, 564, 674, 845, 873, 1173, 1194, 1245
GlaI GCGC 1 cut(s) 1225
GluI GCNGC 7 cut(s) 78, 337, 410, 413, 444, 860, 1557
GsaI CCCAGC 1 cut(s) 1719
GsuI CTGGAG 1 cut(s) 234
HaeII RGCGCY 1 cut(s) 1227
HaeIII GGCC 5 cut(s) 200, 350, 431, 716, 736
HapII CCGG 3 cut(s) 447, 851, 1356
HgaI GACGC 1 cut(s) 1169
HhaI GCGC 1 cut(s) 1226
Hin6I GCGC 1 cut(s) 1224
HinP1I GCGC 1 cut(s) 1224
HindIII AAGCTT 2 cut(s) 188, 497
HinfI GANTC 9 cut(s) 17, 329, 417, 551, 597, 632, 681, 1709, 1775
HpaII CCGG 3 cut(s) 447, 851, 1356
HphI GGTGA 7 cut(s) 530, 828, 1295, 1544, 1605, 1616, 1704
Hpy166II GTNNAC 4 cut(s) 256, 998, 1273, 1382
Hpy8I GTNNAC 4 cut(s) 256, 998, 1273, 1382
Hpy99I CGWCG 1 cut(s) 295
HpyCH4III ACNGT 7 cut(s) 98, 231, 840, 995, 1088, 1137, 1220
HpyCH4IV ACGT 2 cut(s) 405, 1752
HpyF10VI GCNNNNNNNGC 5 cut(s) 86, 285, 356, 856, 1616
HpySE526I ACGT 2 cut(s) 405, 1752
HspAI GCGC 1 cut(s) 1224
Ksp22I TGATCA 1 cut(s) 502
KspI CCGCGG 1 cut(s) 90
Kzo9I GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
LmnI GCTCC 2 cut(s) 209, 472
Lsp1109I GCAGC 7 cut(s) 64, 323, 421, 424, 455, 846, 1543
LweI GCATC 8 cut(s) 20, 128, 969, 991, 1023, 1476, 1597, 1771
MaeI CTAG 9 cut(s) 59, 440, 564, 674, 845, 873, 1173, 1194, 1245
MaeII ACGT 2 cut(s) 405, 1752
MaeIII GTNAC 6 cut(s) 518, 622, 827, 1301, 1582, 1706
MalI GATC 5 cut(s) 504, 1096, 1332, 1464, 1701
MboI GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
MflI RGATCY 1 cut(s) 1094
MhlI GDGCHC 2 cut(s) 290, 1384
MlsI TGGCCA 1 cut(s) 431
MluCI AATT 4 cut(s) 761, 766, 953, 1522
MluNI TGGCCA 1 cut(s) 431
MlyI GAGTC 6 cut(s) 26, 426, 545, 641, 1703, 1784
MmeI TCCRAC 1 cut(s) 1072
Mox20I TGGCCA 1 cut(s) 431
MscI TGGCCA 1 cut(s) 431
MseI TTAA 5 cut(s) 669, 945, 1146, 1251, 1503
MslI CAYNNNNRTG 1 cut(s) 875
Msp20I TGGCCA 1 cut(s) 431
MspA1I CMGCKG 2 cut(s) 89, 1619
MspI CCGG 3 cut(s) 447, 851, 1356
MspR9I CCNGG 1 cut(s) 968
MvaI CCWGG 1 cut(s) 968
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 5 cut(s) 86, 285, 356, 856, 1616
NdeII GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
NheI GCTAGC 1 cut(s) 439
NlaIV GGNNCC 2 cut(s) 618, 1096
NmuCI GTSAC 3 cut(s) 518, 1301, 1706
NspI RCATGY 2 cut(s) 376, 897
NspV TTCGAA 1 cut(s) 600
OliI CACNNNNGTG 1 cut(s) 875
PagI TCATGA 2 cut(s) 40, 124
PceI AGGCCT 1 cut(s) 736
PfeI GAWTC 3 cut(s) 329, 597, 681
PkrI GCNGC 7 cut(s) 79, 338, 411, 414, 445, 861, 1558
PleI GAGTC 6 cut(s) 25, 425, 545, 640, 1703, 1783
PpsI GAGTC 6 cut(s) 25, 425, 545, 640, 1703, 1783
Psp6I CCWGG 1 cut(s) 966
PspEI GGTNACC 1 cut(s) 1301
PspFI CCCAGC 1 cut(s) 1715
PspGI CCWGG 1 cut(s) 966
PspN4I GGNNCC 2 cut(s) 618, 1096
PspPI GGNCC 1 cut(s) 199
PstI CTGCAG 1 cut(s) 1052
PsuI RGATCY 1 cut(s) 1094
RsaI GTAC 1 cut(s) 451
RsaNI GTAC 1 cut(s) 450
RseI CAYNNNNRTG 1 cut(s) 875
SacII CCGCGG 1 cut(s) 90
SaqAI TTAA 5 cut(s) 669, 945, 1146, 1251, 1503
SatI GCNGC 7 cut(s) 78, 337, 410, 413, 444, 860, 1557
Sau3AI GATC 5 cut(s) 502, 1094, 1330, 1462, 1699
Sau96I GGNCC 1 cut(s) 199
SbfI CCTGCAGG 1 cut(s) 1052
SchI GAGTC 6 cut(s) 26, 426, 545, 641, 1703, 1784
ScrFI CCNGG 1 cut(s) 968
SdaI CCTGCAGG 1 cut(s) 1052
SduI GDGCHC 2 cut(s) 290, 1384
SfaNI GCATC 8 cut(s) 20, 128, 969, 991, 1023, 1476, 1597, 1771
SfcI CTRYAG 2 cut(s) 1048, 1599
Sfr303I CCGCGG 1 cut(s) 90
SfuI TTCGAA 1 cut(s) 600
SgrBI CCGCGG 1 cut(s) 90
SmiMI CAYNNNNRTG 1 cut(s) 875
SmlI CTYRAG 4 cut(s) 647, 1114, 1307, 1567
SmoI CTYRAG 4 cut(s) 647, 1114, 1307, 1567
SpeI ACTAGT 2 cut(s) 872, 1193
Sse8387I CCTGCAGG 1 cut(s) 1052
Sse9I AATT 4 cut(s) 761, 766, 953, 1522
SseBI AGGCCT 1 cut(s) 736
SsiI CCGC 6 cut(s) 87, 89, 386, 533, 1617, 1630
SspMI CTAG 9 cut(s) 59, 440, 564, 674, 845, 873, 1173, 1194, 1245
StuI AGGCCT 1 cut(s) 736
StyD4I CCNGG 1 cut(s) 966
StyI CCWWGG 2 cut(s) 478, 1680
TaaI ACNGT 7 cut(s) 98, 231, 840, 995, 1088, 1137, 1220
TaiI ACGT 2 cut(s) 408, 1755
TaqI TCGA 5 cut(s) 290, 600, 963, 1277, 1520
TaqII GACCGA 1 cut(s) 1588
TasI AATT 4 cut(s) 761, 766, 953, 1522
TfiI GAWTC 3 cut(s) 329, 597, 681
Tru1I TTAA 5 cut(s) 669, 945, 1146, 1251, 1503
Tru9I TTAA 5 cut(s) 669, 945, 1146, 1251, 1503
TscAI CASTG 2 cut(s) 234, 790
TseFI GTSAC 3 cut(s) 518, 1301, 1706
TseI GCWGC 7 cut(s) 77, 336, 409, 412, 443, 859, 1556
Tsp45I GTSAC 3 cut(s) 518, 1301, 1706
TspDTI ATGAA 4 cut(s) 29, 148, 367, 629
TspGWI ACGGA 2 cut(s) 229, 308
TspRI CASTG 2 cut(s) 234, 790
VneI GTGCAC 1 cut(s) 1380
XapI RAATTY 2 cut(s) 761, 1522
XbaI TCTAGA 1 cut(s) 1244
XceI RCATGY 2 cut(s) 376, 897
XmiI GTMKAC 1 cut(s) 1272
XspI CTAG 9 cut(s) 59, 440, 564, 674, 845, 873, 1173, 1194, 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.