Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003748.1

Orthogroup ID

OG0000153

Physical Location & Seq

Genomic Coordinates Forward (+)

91416 .. 93554

Gene Structure 2139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003748.1_g000027.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

atggagaagaaggttaagaagaaggctagagcttctcaaaaggataagtgggttccatctgattcccggaagaaggttgccgaaccaagcaacccaagggttaaggatgatggagtttcagttgcaaaagtgagaaaagcttgtcctcacattgacaaaggtgttgatttgaataaattgcaagctaaaattgggtcttcagcagttattaggtgtgaagattgtaaggaaggtgccattgataggaagggaggtaatagaaagggcaaacatgctaagaagaaaggacgtgctaattctaaatctgagtcaaaatccgtttggctttgtttagaatgcggtcattatgcttgtggtggggttggacttccaataacccctctatgccacgcagttcggcatgcaagtcaaactcgtcacgcattggtggtgcagtttgaaaacccacagttgcgatggtgcttccagtgcagcacacttattaccattgataagacgggggagaatggtgaagaaaaagatgtcttttctgatgttgtgaaattaattaagggtcattcgtcggaggactcatcaggtgatgtcaaggatgtatggtttggtagtggcagtgtaacaagcaaaatcaaattagctaggaatacatcaagccttttggatggaagaggaggttatgtagtaacaagcaaaatcaaatcagctagcaatacatcaagccttttggatggaagaggaggttatgtagtaagacgcttagctaatcttggtaacacttgcttcttcaattctattttacagcaccttctagctattgataggttgcggggttacttcttcaattctatttttctgaaccttctagctattgatagattgcggggtgttggtcttcatgaaggtaaccataacgagcaggctggatcagtcttactgggaattggaggaaccgcgcttgagcctcaccttcctaagatagcactaggaggcaatagtgtcagtgtttcaaactcaataggtggaggtactctgtcttgtgatgcttcgatttgttccctcgcttctaatttagacaaatctaaaaaagggtcgataattgatttggagatgcggctcaaaaattttattgcttgttttgatactgaggattgcttaagcgttactattgatgacattgcacatccattgagtggtattcagtcttcttttgagggtggaaaagtcccctcagaatttgtgattccccttaccaagtttgttgaaaagtatggtggaggtagtttctccagcttgtttgcagaggggaaaagtgcacgtcaaaaacaaatattaattaaggagcttggttctgtgttgtatagcatggaggttgaggaagtgaagactgaggagatttttctagtctggagggacgcatgtcgtgacatcataaattggggactcaatgtcaattttatgttggaccatttgaagcaagctgctagaaatttctttggttatatgctcaggcctactggatcagagaattgttgcagggagattcaccagttggagaaagacgtattcaagttgagaaataaactttcacgtcttgaacaacaactgggaaaggcccaagaagacctacgcactagacttggcgatgctattggctctgatagtatggtttgtatgttagaatcttcttggactcctcatagccgcgcaattcaaaacctgtattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0019538 GO:0019941 GO:0030163 GO:0032991 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

573

Amino Acids

62.82

Weight (kDa)

9.12

Isoelectric Point (pI)

36.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000153)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis	RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata	RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora	Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii	Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa	Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha	Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana	Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	233
AccB7I	CCANNNNNTGG	1 cut(s)	1187
AccII	CGCG	2 cut(s)	950, 1701
AciI	CCGC	6 cut(s)	339, 823, 877, 948, 1108, 1699
AclWI	GGATC	2 cut(s)	928, 1522
AcsI	RAATTY	3 cut(s)	1117, 1229, 1483
AcuI	CTGAAG	1 cut(s)	183
AfaI	GTAC	1 cut(s)	1024
AfiI	CCNNNNNNNGG	3 cut(s)	73, 243, 1187
AflII	CTTAAG	1 cut(s)	1150
AhdI	GACNNNNNGTC	1 cut(s)	1442
AjiI	CACGTC	3 cut(s)	290, 1313, 1586
Alw21I	GWGCWC	1 cut(s)	1312
Alw44I	GTGCAC	1 cut(s)	1308
AlwI	GGATC	2 cut(s)	928, 1522
AoxI	GGCC	2 cut(s)	1505, 1608
ApaLI	GTGCAC	1 cut(s)	1308
ApeKI	GCWGC	2 cut(s)	471, 1475
ApoI	RAATTY	3 cut(s)	1117, 1229, 1483
AseI	ATTAAT	2 cut(s)	545, 1328
AspLEI	GCGC	2 cut(s)	952, 1703
AspS9I	GGNCC	2 cut(s)	1459, 1609
AsuC2I	CCSGG	1 cut(s)	67
AsuHPI	GGTGA	4 cut(s)	521, 590, 953, 1532
AsuNHI	GCTAGC	1 cut(s)	701
AvaII	GGWCC	1 cut(s)	1459
BaeGI	GKGCMC	1 cut(s)	1312
BanI	GGYRCC	1 cut(s)	233
BarI	GAAGNNNNNNTAC	2 cut(s)	1183, 1215
BbsI	GAAGAC	5 cut(s)	189, 881, 1191, 1385, 1623
Bbv12I	GWGCWC	1 cut(s)	1312
BbvI	GCAGC	2 cut(s)	483, 1462
BccI	CCATC	5 cut(s)	64, 104, 450, 653, 719
BcnI	CCSGG	1 cut(s)	67
BfaI	CTAG	9 cut(s)	27, 636, 702, 806, 860, 980, 1397, 1479, 1629
BfrI	CTTAAG	1 cut(s)	1150
BisI	GCNGC	4 cut(s)	472, 1109, 1476, 1699
BlpI	GCTNAGC	1 cut(s)	754
BlsI	GCNGC	4 cut(s)	473, 1110, 1477, 1700
Bme1390I	CCNGG	1 cut(s)	67
Bme18I	GGWCC	1 cut(s)	1459
BmeRI	GACNNNNNGTC	1 cut(s)	1442
BmgBI	CACGTC	3 cut(s)	290, 1313, 1586
BmgT120I	GGNCC	2 cut(s)	1459, 1609
BmiI	GGNNCC	3 cut(s)	54, 235, 946
BmrFI	CCNGG	1 cut(s)	67
BmrI	ACTGGG	2 cut(s)	941, 1610
BmsI	GCATC	3 cut(s)	1027, 1095, 1630
BmtI	GCTAGC	1 cut(s)	705
BmuI	ACTGGG	2 cut(s)	941, 1610
BoxI	GACNNNNGTC	1 cut(s)	1413
BpiI	GAAGAC	5 cut(s)	189, 881, 1191, 1385, 1623
BpmI	CTGGAG	2 cut(s)	1267, 1423
Bpu10I	CCTNAGC	1 cut(s)	1502
Bpu1102I	GCTNAGC	1 cut(s)	754
BpuEI	CTTGAG	1 cut(s)	974
BpuMI	CCSGG	1 cut(s)	67
BsaJI	CCNNGG	1 cut(s)	95
BsaXI	ACNNNNNCTCC	6 cut(s)	105, 135, 660, 690, 726, 756
Bsc4I	CCNNNNNNNGG	3 cut(s)	73, 243, 1187
Bse1I	ACTGG	5 cut(s)	466, 936, 1516, 1543, 1605
Bse3DI	GCAATG	1 cut(s)	1170
BseDI	CCNNGG	1 cut(s)	95
BseGI	GGATG	5 cut(s)	112, 595, 664, 730, 1177
BseLI	CCNNNNNNNGG	3 cut(s)	73, 243, 1187
BseMI	GCAATG	1 cut(s)	1170
BseMII	CTCAG	5 cut(s)	297, 1131, 1239, 1374, 1516
BseNI	ACTGG	5 cut(s)	466, 936, 1516, 1543, 1605
BseRI	GAGGAG	4 cut(s)	681, 747, 1400, 1680
BseSI	GKGCMC	1 cut(s)	1312
BseXI	GCAGC	2 cut(s)	483, 1462
BsgI	GTGCAG	2 cut(s)	452, 490
Bsh1236I	CGCG	2 cut(s)	950, 1701
BshFI	GGCC	2 cut(s)	1507, 1610
BshNI	GGYRCC	1 cut(s)	233
BsiHKAI	GWGCWC	1 cut(s)	1312
BsiSI	CCGG	1 cut(s)	67
BslFI	GGGAC	3 cut(s)	1205, 1421, 1449
BslI	CCNNNNNNNGG	3 cut(s)	73, 243, 1187
BsmFI	GGGAC	3 cut(s)	1205, 1421, 1449
BsmI	GAATGC	1 cut(s)	341
BsnI	GGCC	2 cut(s)	1507, 1610
Bsp1286I	GDGCHC	1 cut(s)	1312
Bsp143I	GATC	2 cut(s)	920, 1514
Bsp1720I	GCTNAGC	1 cut(s)	754
BspACI	CCGC	6 cut(s)	339, 823, 877, 948, 1108, 1699
BspANI	GGCC	2 cut(s)	1507, 1610
BspCNI	CTCAG	5 cut(s)	298, 1132, 1238, 1375, 1515
BspFNI	CGCG	2 cut(s)	950, 1701
BspHI	TCATGA	1 cut(s)	892
BspLI	GGNNCC	3 cut(s)	54, 235, 946
BspOI	GCTAGC	1 cut(s)	705
BspPI	GGATC	2 cut(s)	928, 1522
BspT107I	GGYRCC	1 cut(s)	233
BspTI	CTTAAG	1 cut(s)	1150
BsrDI	GCAATG	1 cut(s)	1170
BsrI	ACTGG	5 cut(s)	466, 936, 1516, 1543, 1605
BssECI	CCNNGG	1 cut(s)	95
BssMI	GATC	2 cut(s)	920, 1514
BssT1I	CCWWGG	1 cut(s)	95
Bst4CI	ACNGT	1 cut(s)	450
Bst6I	CTCTTC	2 cut(s)	658, 724
BstAFI	CTTAAG	1 cut(s)	1150
BstC8I	GCNNGC	5 cut(s)	183, 402, 703, 915, 1473
BstDEI	CTNAG	8 cut(s)	276, 306, 754, 969, 1140, 1225, 1383, 1502
BstEII	GGTNACC	1 cut(s)	899
BstF5I	GGATG	5 cut(s)	112, 595, 664, 730, 1177
BstFNI	CGCG	2 cut(s)	950, 1701
BstHHI	GCGC	2 cut(s)	952, 1703
BstKTI	GATC	2 cut(s)	923, 1517
BstMBI	GATC	2 cut(s)	920, 1514
BstMWI	GCNNNNNNNGC	1 cut(s)	468
BstNSI	RCATGY	3 cut(s)	275, 404, 1416
BstPAI	GACNNNNGTC	1 cut(s)	1413
BstPI	GGTNACC	1 cut(s)	899
BstSCI	CCNGG	1 cut(s)	65
BstSLI	GKGCMC	1 cut(s)	1312
BstUI	CGCG	2 cut(s)	950, 1701
BstV1I	GCAGC	2 cut(s)	483, 1462
BstV2I	GAAGAC	5 cut(s)	189, 881, 1191, 1385, 1623
BsuRI	GGCC	2 cut(s)	1507, 1610
BtgZI	GCGATG	2 cut(s)	469, 1653
BtrI	CACGTC	3 cut(s)	290, 1313, 1586
BtsCI	GGATG	5 cut(s)	112, 595, 664, 730, 1177
BtsI	GCAGTG	1 cut(s)	616
BtsIMutI	CAGTG	3 cut(s)	473, 616, 1003
Cac8I	GCNNGC	5 cut(s)	183, 402, 703, 915, 1473
CciI	TCATGA	1 cut(s)	892
CfoI	GCGC	2 cut(s)	952, 1703
Cfr13I	GGNCC	2 cut(s)	1459, 1609
CseI	GACGC	2 cut(s)	759, 1418
Csp6I	GTAC	1 cut(s)	1023
CviAII	CATG	5 cut(s)	272, 401, 893, 1360, 1413
CviQI	GTAC	1 cut(s)	1023
DdeI	CTNAG	8 cut(s)	276, 306, 754, 969, 1140, 1225, 1383, 1502
DpnI	GATC	2 cut(s)	922, 1516
DpnII	GATC	2 cut(s)	920, 1514
DriI	GACNNNNNGTC	1 cut(s)	1442
Eam1104I	CTCTTC	2 cut(s)	658, 724
Eam1105I	GACNNNNNGTC	1 cut(s)	1442
EarI	CTCTTC	2 cut(s)	658, 724
Eco130I	CCWWGG	1 cut(s)	95
Eco147I	AGGCCT	1 cut(s)	1507
Eco47I	GGWCC	1 cut(s)	1459
Eco57I	CTGAAG	1 cut(s)	183
Eco91I	GGTNACC	1 cut(s)	899
EcoO65I	GGTNACC	1 cut(s)	899
EcoT14I	CCWWGG	1 cut(s)	95
ErhI	CCWWGG	1 cut(s)	95
FaeI	CATG	5 cut(s)	275, 404, 896, 1363, 1416
FaqI	GGGAC	3 cut(s)	1205, 1421, 1449
FatI	CATG	5 cut(s)	271, 400, 892, 1359, 1412
FauI	CCCGC	2 cut(s)	816, 870
Fnu4HI	GCNGC	4 cut(s)	472, 1109, 1476, 1699
FokI	GGATG	5 cut(s)	119, 602, 671, 737, 1164
Fsp4HI	GCNGC	4 cut(s)	472, 1109, 1476, 1699
FspBI	CTAG	9 cut(s)	27, 636, 702, 806, 860, 980, 1397, 1479, 1629
GlaI	GCGC	2 cut(s)	951, 1702
GluI	GCNGC	4 cut(s)	472, 1109, 1476, 1699
GsuI	CTGGAG	2 cut(s)	1267, 1423
HaeIII	GGCC	2 cut(s)	1507, 1610
HapII	CCGG	1 cut(s)	67
HgaI	GACGC	2 cut(s)	759, 1418
HhaI	GCGC	2 cut(s)	952, 1703
Hin1II	CATG	5 cut(s)	275, 404, 896, 1363, 1416
Hin6I	GCGC	2 cut(s)	950, 1701
HinP1I	GCGC	2 cut(s)	950, 1701
HindIII	AAGCTT	1 cut(s)	138
HinfI	GANTC	8 cut(s)	62, 308, 569, 1237, 1437, 1537, 1676, 1687
HpaII	CCGG	1 cut(s)	67
HphI	GGTGA	4 cut(s)	521, 590, 953, 1532
Hpy166II	GTNNAC	1 cut(s)	1310
Hpy188I	TCNGA	8 cut(s)	61, 307, 532, 565, 852, 1228, 1519, 1654
Hpy188III	TCNNGA	4 cut(s)	893, 1402, 1418, 1589
Hpy8I	GTNNAC	1 cut(s)	1310
Hpy99I	CGWCG	1 cut(s)	565
HpyAV	CCTTC	9 cut(s)	4, 16, 67, 224, 241, 812, 866, 890, 974
HpyCH4III	ACNGT	1 cut(s)	450
HpyCH4IV	ACGT	4 cut(s)	289, 1312, 1557, 1585
HpyCH4V	TGCA	9 cut(s)	125, 181, 404, 433, 471, 1175, 1295, 1310, 1530
HpyF10VI	GCNNNNNNNGC	1 cut(s)	468
HpyF3I	CTNAG	8 cut(s)	276, 306, 754, 969, 1140, 1225, 1383, 1502
HpySE526I	ACGT	4 cut(s)	289, 1312, 1557, 1585
Hsp92II	CATG	5 cut(s)	275, 404, 896, 1363, 1416
HspAI	GCGC	2 cut(s)	950, 1701
Kzo9I	GATC	2 cut(s)	920, 1514
LmnI	GCTCC	1 cut(s)	1336
Lsp1109I	GCAGC	2 cut(s)	483, 1462
LweI	GCATC	3 cut(s)	1027, 1095, 1630
MaeI	CTAG	9 cut(s)	27, 636, 702, 806, 860, 980, 1397, 1479, 1629
MaeII	ACGT	4 cut(s)	289, 1312, 1557, 1585
MaeIII	GTNAC	8 cut(s)	416, 613, 679, 767, 827, 899, 1156, 1418
MalI	GATC	2 cut(s)	922, 1516
MboI	GATC	2 cut(s)	920, 1514
MhlI	GDGCHC	1 cut(s)	1312
MlyI	GAGTC	4 cut(s)	317, 563, 1431, 1681
MmeI	TCCRAC	4 cut(s)	343, 543, 1437, 1527
MseI	TTAA	8 cut(s)	15, 102, 545, 549, 1151, 1328, 1332, 1720
MspCI	CTTAAG	1 cut(s)	1150
MspI	CCGG	1 cut(s)	67
MspR9I	CCNGG	1 cut(s)	67
Mva1269I	GAATGC	1 cut(s)	341
MvnI	CGCG	2 cut(s)	950, 1701
MwoI	GCNNNNNNNGC	1 cut(s)	468
NciI	CCSGG	1 cut(s)	67
NdeII	GATC	2 cut(s)	920, 1514
NheI	GCTAGC	1 cut(s)	701
NlaIII	CATG	5 cut(s)	275, 404, 896, 1363, 1416
NlaIV	GGNNCC	3 cut(s)	54, 235, 946
NmuCI	GTSAC	2 cut(s)	416, 1418
NspI	RCATGY	3 cut(s)	275, 404, 1416
PacI	TTAATTAA	2 cut(s)	549, 1332
PaeI	GCATGC	1 cut(s)	404
PagI	TCATGA	1 cut(s)	892
PceI	AGGCCT	1 cut(s)	1507
PctI	GAATGC	1 cut(s)	341
PfeI	GAWTC	4 cut(s)	62, 1237, 1537, 1676
PflMI	CCANNNNNTGG	1 cut(s)	1187
PfoI	TCCNGGA	1 cut(s)	65
PkrI	GCNGC	4 cut(s)	473, 1110, 1477, 1700
PleI	GAGTC	4 cut(s)	316, 563, 1431, 1681
PpsI	GAGTC	4 cut(s)	316, 563, 1431, 1681
PshAI	GACNNNNGTC	1 cut(s)	1413
PshBI	ATTAAT	2 cut(s)	545, 1328
PspEI	GGTNACC	1 cut(s)	899
PspN4I	GGNNCC	3 cut(s)	54, 235, 946
PspPI	GGNCC	2 cut(s)	1459, 1609
RsaI	GTAC	1 cut(s)	1024
RsaNI	GTAC	1 cut(s)	1023
SaqAI	TTAA	8 cut(s)	15, 102, 545, 549, 1151, 1328, 1332, 1720
SatI	GCNGC	4 cut(s)	472, 1109, 1476, 1699
Sau3AI	GATC	2 cut(s)	920, 1514
Sau96I	GGNCC	2 cut(s)	1459, 1609
SchI	GAGTC	4 cut(s)	317, 563, 1431, 1681
ScrFI	CCNGG	1 cut(s)	67
SduI	GDGCHC	1 cut(s)	1312
SfaNI	GCATC	3 cut(s)	1027, 1095, 1630
SinI	GGWCC	1 cut(s)	1459
SmlI	CTYRAG	2 cut(s)	953, 1150
SmoI	CTYRAG	2 cut(s)	953, 1150
SphI	GCATGC	1 cut(s)	404
SseBI	AGGCCT	1 cut(s)	1507
SsiI	CCGC	6 cut(s)	339, 823, 877, 948, 1108, 1699
SspI	AATATT	1 cut(s)	1326
SspMI	CTAG	9 cut(s)	27, 636, 702, 806, 860, 980, 1397, 1479, 1629
StuI	AGGCCT	1 cut(s)	1507
StyD4I	CCNGG	1 cut(s)	65
StyI	CCWWGG	1 cut(s)	95
TaaI	ACNGT	1 cut(s)	450
TaiI	ACGT	4 cut(s)	292, 1315, 1560, 1588
TaqI	TCGA	2 cut(s)	1043, 1088
TauI	GCSGC	2 cut(s)	1111, 1701
TfiI	GAWTC	4 cut(s)	62, 1237, 1537, 1676
Tru1I	TTAA	8 cut(s)	15, 102, 545, 549, 1151, 1328, 1332, 1720
Tru9I	TTAA	8 cut(s)	15, 102, 545, 549, 1151, 1328, 1332, 1720
TscAI	CASTG	3 cut(s)	473, 616, 1003
TseFI	GTSAC	2 cut(s)	416, 1418
TseI	GCWGC	2 cut(s)	471, 1475
Tsp45I	GTSAC	2 cut(s)	416, 1418
TspDTI	ATGAA	2 cut(s)	881, 909
TspGWI	ACGGA	1 cut(s)	307
TspRI	CASTG	3 cut(s)	473, 616, 1003
Van91I	CCANNNNNTGG	1 cut(s)	1187
Vha464I	CTTAAG	1 cut(s)	1150
VneI	GTGCAC	1 cut(s)	1308
VpaK11BI	GGWCC	1 cut(s)	1459
VspI	ATTAAT	2 cut(s)	545, 1328
XapI	RAATTY	3 cut(s)	1117, 1229, 1483
XceI	RCATGY	3 cut(s)	275, 404, 1416
XcmI	CCANNNNNNNNNTGG	1 cut(s)	453
XspI	CTAG	9 cut(s)	27, 636, 702, 806, 860, 980, 1397, 1479, 1629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.