RLG00000020979

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000153
Physical Location & Seq
Reverse (-)
70755695 .. 70759614
3920 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020979

Sequence Viewer

Length: 1758 bp
ATGGCACAAGCATCTGAGTCTTCTCAGCCTACTGAACTTCATGACCACCACTTCTCACTGGAAGACGGTCTCATTCCTGCTTCCACTGCTGGGGACTGCGAAGGTAGCTCAGAGGAGGCATCTCATGAGTTTTCTGGGTGCTTTGTTTCTCCCAAGTTCATATCCAGACATTTCCTTTCTTTTATCCAGAGTAACTCATCACCGTTCTTAGAATCAGTTGAGCTGCTTCTAGCCACTAGTGCGCAGTTCATAATAGCATGTGGCGATTTCTTTGACCCCGTGATGGATAAGTATTCCCCTCATAGGGTTAAGAGGCAATTTGGCATCGACCAGGATGTGCCATCCCATCTATCTTATGGTGGACATCTTGGGGAATGCATCATGGATTTCACTCGGACAGATGGTATTTCCTGCAGGGGTGTGCTCTCTGATAGTCTCGGGAAGAAGGACTGTGTTGGATCTCCTATATCAACATTCTTGAGATTTTGGGAGTTGCAGCGGTGCGAGTTTAGGAGGTTTATTCAAACTGGTGGGACTAGGTTGTGTCCGAAAGCCACTAGTGAGAACAAGAGACTACTCCGCAGTGGCACTGTCATGGGTGTCATGTCTAGACTTAACCTTCCCTATACCGAGGTATACTCGAATGGTACAAAGAGTGTGGTTGGTCACCTCAAGGGTGGCAAAAGTGGAGATGATCCTGAAGTAGAGTTGCCAGCTGCCGGAATGGAGAAAGGTAGCAAGAGTGCAATAAAGGAAAGTAAAAGGAAGGTTTGCCGCTTCAAACCTAAGGTGGCAAAAGATCGTATCCCCCCTTCTGTAGTCAAGAGTGCCTTTGGTGTTAAAGTGATACTGCCATCGAGTTCGGCTTGTGAAAAAGGGAAGAAGAGGAAAGCTGCTTCTACCCTGAGACCGAGTGGGGTTACTAAGAGGAAGGTTGCAGATGATGCCTCACCTGCTGTCCTTAGGCGGAGTTCTCGCGTGGCCAACATGAACTTTTCTAAACGTAAATCGTCTTCCGTGGGTGATGTTTATGTTGATCTTAGTGATGGGCCAAGCACTGATGGGGATGGTAGCCCCCTGAGTGATGAGGAGAATGAGTCTGATACTTATGAGGGAAAGACCTGCGATGATGGTAGCCAGGTGGAGTCTCTTGAAGATGAGGATGGTCAGGGAGCTCATGTTGCTGTCTTGATGGGGAATCACGAGCATAATGTTACTGGTGCTCTAGTGTGGGAATCTGCTATAAATGTCGGTCCTTGTGCAGATAATTATAATAAGCAGGGTGGATCAGTTTTGCTGGCAGTTGGGGGGACATCGTTCGAGCCCCACCTTCATGAGGCAACACCTGGGGGCAATGGCGCCACTGCAGCAGCCTTGGTCAGTAAAGGGACTCCACTTCGTTCTACCCCTGCTTGTTCTCTTGCTCCCAACTCAGATAGATCAGGAAGGGCGTCAAGAGCTGATTTGGAGGTGCGGTTTAGAAAGTTCACCACATGTTTTGACACTGAGGAACGCTTGAGTATCACTATTGACAATATTGTGCTCCCGTTGAGCGAAAGTAGTTGCAGGAAGATCATTCAAATGGAGGAAGCTGTATCCAAGTTGAGGGAAAATCTTTCGCATCTTGAACAACAATTAGGAAAGGCTCGAGAAGACTTATGCACCAAGCTTGGTGATGACATTAGCTTAGATAGCAAGTCCTGCATATTAAAATCTTCTTGGGTTGCTCAGAGCCGTGTAACTCATGGCTTGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

586

Amino Acids

63.19

Weight (kDa)

6.49

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1272
AarI CACCTGC 1 cut(s) 961
Acc16I TGCGCA 1 cut(s) 243
Acc36I ACCTGC 2 cut(s) 961, 1130
AccB1I GGYRCC 1 cut(s) 1358
AccI GTMKAC 1 cut(s) 636
AccII CGCG 1 cut(s) 978
AciI CCGC 5 cut(s) 499, 580, 775, 967, 1474
AclWI GGATC 3 cut(s) 466, 689, 1294
AcoI YGGCCR 1 cut(s) 981
AcuI CTGAAG 1 cut(s) 720
AcyI GRCGYC 2 cut(s) 1359, 1451
AfaI GTAC 1 cut(s) 649
AfiI CCNNNNNNNGG 7 cut(s) 90, 283, 303, 304, 719, 1336, 1605
AflIII ACRYGT 1 cut(s) 1493
AgsI TTSAA 5 cut(s) 524, 781, 1154, 1580, 1628
AhlI ACTAGT 2 cut(s) 236, 557
AjnI CCWGG 3 cut(s) 330, 1137, 1345
AluBI AGCT 9 cut(s) 108, 223, 716, 893, 1175, 1460, 1592, 1669, 1686
AluI AGCT 9 cut(s) 108, 223, 716, 893, 1175, 1460, 1592, 1669, 1686
Alw21I GWGCWC 4 cut(s) 426, 1177, 1225, 1545
Alw26I GTCTC 5 cut(s) 74, 440, 565, 901, 1152
AlwI GGATC 3 cut(s) 466, 689, 1294
Ama87I CYCGRG 2 cut(s) 437, 1647
AoxI GGCC 2 cut(s) 981, 1049
ApeKI GCWGC 6 cut(s) 223, 496, 716, 893, 1367, 1370
AspLEI GCGC 2 cut(s) 244, 1361
AspS9I GGNCC 2 cut(s) 1049, 1253
AsuHPI GGTGA 6 cut(s) 192, 659, 942, 1034, 1480, 1685
AvaI CYCGRG 2 cut(s) 437, 1647
AvaII GGWCC 1 cut(s) 1253
AxyI CCTNAGG 2 cut(s) 786, 962
BalI TGGCCA 1 cut(s) 983
BanI GGYRCC 1 cut(s) 1358
BanII GRGCYC 2 cut(s) 1177, 1326
BarI GAAGNNNNNNTAC 4 cut(s) 796, 828, 997, 1029
BauI CACGAG 1 cut(s) 1202
BbsI GAAGAC 4 cut(s) 12, 69, 1005, 1659
Bbv12I GWGCWC 4 cut(s) 426, 1177, 1225, 1545
BbvI GCAGC 6 cut(s) 210, 508, 703, 880, 1379, 1382
BceAI ACGGC 1 cut(s) 1719
BciT130I CCWGG 3 cut(s) 332, 1139, 1347
BciVI GTATCC 2 cut(s) 815, 1606
BcoDI GTCTC 5 cut(s) 74, 440, 565, 901, 1152
BcuI ACTAGT 2 cut(s) 236, 557
BfaI CTAG 6 cut(s) 230, 237, 537, 558, 609, 1226
BfmI CTRYAG 3 cut(s) 412, 816, 1365
BfoI RGCGCY 1 cut(s) 1362
BfuAI ACCTGC 2 cut(s) 961, 1130
BfuI GTATCC 2 cut(s) 815, 1606
BisI GCNGC 7 cut(s) 224, 497, 717, 775, 894, 1368, 1371
BlsI GCNGC 7 cut(s) 225, 498, 718, 776, 895, 1369, 1372
Bme1390I CCNGG 3 cut(s) 332, 1139, 1347
Bme18I GGWCC 1 cut(s) 1253
BmeT110I CYCGRG 2 cut(s) 437, 1647
BmgT120I GGNCC 2 cut(s) 1049, 1253
BmiI GGNNCC 1 cut(s) 1360
BmrFI CCNGG 3 cut(s) 332, 1139, 1347
BmsI GCATC 6 cut(s) 20, 128, 333, 387, 934, 1630
BpiI GAAGAC 4 cut(s) 12, 69, 1005, 1659
BplI GAGNNNNNCTC 2 cut(s) 623, 655
BpuEI CTTGAG 3 cut(s) 499, 656, 1537
BsaHI GRCGYC 2 cut(s) 1359, 1451
BsaI GGTCTC 2 cut(s) 74, 901
BsaJI CCNNGG 4 cut(s) 630, 1017, 1346, 1374
BsaXI ACNNNNNCTCC 6 cut(s) 1082, 1112, 1164, 1194, 1460, 1490
Bsc4I CCNNNNNNNGG 7 cut(s) 90, 283, 303, 304, 719, 1336, 1605
Bse1I ACTGG 3 cut(s) 63, 532, 1222
Bse21I CCTNAGG 2 cut(s) 786, 962
Bse3DI GCAATG 1 cut(s) 1360
BseBI CCWGG 3 cut(s) 332, 1139, 1347
BseDI CCNNGG 4 cut(s) 630, 1017, 1346, 1374
BseGI GGATG 4 cut(s) 340, 341, 1072, 1168
BseLI CCNNNNNNNGG 7 cut(s) 90, 283, 303, 304, 719, 1336, 1605
BseMI GCAATG 1 cut(s) 1360
BseMII CTCAG 8 cut(s) 6, 38, 123, 896, 1070, 1446, 1497, 1742
BseNI ACTGG 3 cut(s) 63, 532, 1222
BseRI GAGGAG 2 cut(s) 128, 1103
BseXI GCAGC 6 cut(s) 210, 508, 703, 880, 1379, 1382
BseYI CCCAGC 1 cut(s) 89
BsgI GTGCAG 1 cut(s) 1281
Bsh1236I CGCG 1 cut(s) 978
BshFI GGCC 2 cut(s) 983, 1051
BshNI GGYRCC 1 cut(s) 1358
BsiHKAI GWGCWC 4 cut(s) 426, 1177, 1225, 1545
BsiHKCI CYCGRG 2 cut(s) 437, 1647
BsiSI CCGG 1 cut(s) 720
BslFI GGGAC 4 cut(s) 107, 547, 1324, 1402
BslI CCNNNNNNNGG 7 cut(s) 90, 283, 303, 304, 719, 1336, 1605
BsmAI GTCTC 5 cut(s) 74, 440, 565, 901, 1152
BsmFI GGGAC 4 cut(s) 107, 547, 1324, 1402
BsmI GAATGC 1 cut(s) 380
BsnI GGCC 2 cut(s) 983, 1051
Bso31I GGTCTC 2 cut(s) 74, 901
BsoBI CYCGRG 2 cut(s) 437, 1647
Bsp1286I GDGCHC 5 cut(s) 426, 1177, 1225, 1326, 1545
Bsp143I GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
BspACI CCGC 5 cut(s) 499, 580, 775, 967, 1474
BspANI GGCC 2 cut(s) 983, 1051
BspCNI CTCAG 8 cut(s) 7, 37, 122, 897, 1071, 1445, 1498, 1741
BspFNI CGCG 1 cut(s) 978
BspHI TCATGA 3 cut(s) 40, 124, 1333
BspLI GGNNCC 1 cut(s) 1360
BspMAI CTGCAG 2 cut(s) 416, 1369
BspMI ACCTGC 2 cut(s) 961, 1130
BspPI GGATC 3 cut(s) 466, 689, 1294
BspT107I GGYRCC 1 cut(s) 1358
BspTNI GGTCTC 2 cut(s) 74, 901
BsrDI GCAATG 1 cut(s) 1360
BsrI ACTGG 3 cut(s) 63, 532, 1222
BssECI CCNNGG 4 cut(s) 630, 1017, 1346, 1374
BssMI GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
BssNAI GTATAC 1 cut(s) 637
BssNI GRCGYC 2 cut(s) 1359, 1451
BssSI CACGAG 1 cut(s) 1202
BssT1I CCWWGG 1 cut(s) 1374
Bst1107I GTATAC 1 cut(s) 637
Bst2BI CACGAG 1 cut(s) 1202
Bst2UI CCWGG 3 cut(s) 332, 1139, 1347
Bst4CI ACNGT 4 cut(s) 68, 204, 452, 592
Bst6I CTCTTC 1 cut(s) 878
BstACI GRCGYC 2 cut(s) 1359, 1451
BstAPI GCANNNNNTGC 2 cut(s) 944, 1701
BstC8I GCNNGC 2 cut(s) 714, 1299
BstDSI CCRYGG 1 cut(s) 1017
BstEII GGTNACC 1 cut(s) 665
BstENI CCTNNNNNAGG 1 cut(s) 1334
BstF5I GGATG 4 cut(s) 340, 341, 1072, 1168
BstFNI CGCG 1 cut(s) 978
BstH2I RGCGCY 1 cut(s) 1362
BstHHI GCGC 2 cut(s) 244, 1361
BstKTI GATC 7 cut(s) 461, 697, 802, 1039, 1289, 1442, 1575
BstMAI GTCTC 5 cut(s) 74, 440, 565, 901, 1152
BstMBI GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
BstNI CCWGG 3 cut(s) 332, 1139, 1347
BstNSI RCATGY 2 cut(s) 261, 1497
BstPI GGTNACC 1 cut(s) 665
BstSCI CCNGG 3 cut(s) 330, 1137, 1345
BstSFI CTRYAG 3 cut(s) 412, 816, 1365
BstUI CGCG 1 cut(s) 978
BstV1I GCAGC 6 cut(s) 210, 508, 703, 880, 1379, 1382
BstV2I GAAGAC 4 cut(s) 12, 69, 1005, 1659
BstX2I RGATCY 1 cut(s) 458
BstYI RGATCY 1 cut(s) 458
BstZ17I GTATAC 1 cut(s) 637
Bsu36I CCTNAGG 2 cut(s) 786, 962
BsuI GTATCC 2 cut(s) 815, 1606
BsuRI GGCC 2 cut(s) 983, 1051
BtgI CCRYGG 1 cut(s) 1017
BtgZI GCGATG 1 cut(s) 1140
BtsCI GGATG 4 cut(s) 340, 341, 1072, 1168
BtsI GCAGTG 3 cut(s) 84, 589, 1362
BtsIMutI CAGTG 7 cut(s) 56, 84, 588, 589, 1056, 1362, 1503
BveI ACCTGC 2 cut(s) 961, 1130
Cac8I GCNNGC 2 cut(s) 714, 1299
CciI TCATGA 3 cut(s) 40, 124, 1333
CfoI GCGC 2 cut(s) 244, 1361
Cfr13I GGNCC 2 cut(s) 1049, 1253
CseI GACGC 1 cut(s) 1440
Csp6I GTAC 1 cut(s) 648
CspCI CAANNNNNGTGG 4 cut(s) 639, 674, 1480, 1515
CviQI GTAC 1 cut(s) 648
DinI GGCGCC 1 cut(s) 1360
DpnI GATC 7 cut(s) 460, 696, 801, 1038, 1288, 1441, 1574
DpnII GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
EaeI YGGCCR 1 cut(s) 981
Eam1104I CTCTTC 1 cut(s) 878
EarI CTCTTC 1 cut(s) 878
EciI GGCGGA 1 cut(s) 982
Ecl136II GAGCTC 1 cut(s) 1175
Eco130I CCWWGG 1 cut(s) 1374
Eco24I GRGCYC 2 cut(s) 1177, 1326
Eco31I GGTCTC 2 cut(s) 74, 901
Eco47I GGWCC 1 cut(s) 1253
Eco53kI GAGCTC 1 cut(s) 1175
Eco57I CTGAAG 1 cut(s) 720
Eco81I CCTNAGG 2 cut(s) 786, 962
Eco88I CYCGRG 2 cut(s) 437, 1647
Eco91I GGTNACC 1 cut(s) 665
EcoICRI GAGCTC 1 cut(s) 1175
EcoNI CCTNNNNNAGG 1 cut(s) 1334
EcoO65I GGTNACC 1 cut(s) 665
EcoRII CCWGG 3 cut(s) 330, 1137, 1345
EcoT14I CCWWGG 1 cut(s) 1374
EcoT22I ATGCAT 1 cut(s) 380
EcoT38I GRGCYC 2 cut(s) 1177, 1326
EgeI GGCGCC 1 cut(s) 1360
EheI GGCGCC 1 cut(s) 1360
ErhI CCWWGG 1 cut(s) 1374
FalI AAGNNNNNCTT 2 cut(s) 815, 847
FaqI GGGAC 4 cut(s) 107, 547, 1324, 1402
FblI GTMKAC 1 cut(s) 636
Fnu4HI GCNGC 7 cut(s) 224, 497, 717, 775, 894, 1368, 1371
FokI GGATG 4 cut(s) 328, 347, 1079, 1175
FriOI GRGCYC 2 cut(s) 1177, 1326
Fsp4HI GCNGC 7 cut(s) 224, 497, 717, 775, 894, 1368, 1371
FspBI CTAG 6 cut(s) 230, 237, 537, 558, 609, 1226
FspI TGCGCA 1 cut(s) 243
GlaI GCGC 2 cut(s) 243, 1360
GluI GCNGC 7 cut(s) 224, 497, 717, 775, 894, 1368, 1371
GsaI CCCAGC 1 cut(s) 93
HaeII RGCGCY 1 cut(s) 1362
HaeIII GGCC 2 cut(s) 983, 1051
HapII CCGG 1 cut(s) 720
HgaI GACGC 1 cut(s) 1440
HhaI GCGC 2 cut(s) 244, 1361
Hin1I GRCGYC 2 cut(s) 1359, 1451
Hin6I GCGC 2 cut(s) 242, 1359
HinP1I GCGC 2 cut(s) 242, 1359
HindIII AAGCTT 1 cut(s) 1667
HinfI GANTC 7 cut(s) 17, 212, 1097, 1145, 1198, 1235, 1390
HpaII CCGG 1 cut(s) 720
HphI GGTGA 6 cut(s) 192, 659, 942, 1034, 1480, 1685
Hpy166II GTNNAC 3 cut(s) 362, 637, 1488
Hpy188I TCNGA 8 cut(s) 16, 112, 396, 430, 549, 1102, 1435, 1731
Hpy8I GTNNAC 3 cut(s) 362, 637, 1488
HpyAV CCTTC 8 cut(s) 95, 439, 629, 760, 822, 925, 1340, 1440
HpyCH4III ACNGT 4 cut(s) 68, 204, 452, 592
HpyCH4IV ACGT 1 cut(s) 1003
HpySE526I ACGT 1 cut(s) 1003
Hsp92I GRCGYC 2 cut(s) 1359, 1451
HspAI GCGC 2 cut(s) 242, 1359
KasI GGCGCC 1 cut(s) 1358
Kzo9I GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
LmnI GCTCC 3 cut(s) 1172, 1429, 1548
Lsp1109I GCAGC 6 cut(s) 210, 508, 703, 880, 1379, 1382
LweI GCATC 6 cut(s) 20, 128, 333, 387, 934, 1630
MaeI CTAG 6 cut(s) 230, 237, 537, 558, 609, 1226
MaeII ACGT 1 cut(s) 1003
MaeIII GTNAC 5 cut(s) 191, 665, 919, 1213, 1738
MalI GATC 7 cut(s) 460, 696, 801, 1038, 1288, 1441, 1574
MboI GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
MflI RGATCY 1 cut(s) 458
MhlI GDGCHC 5 cut(s) 426, 1177, 1225, 1326, 1545
MlsI TGGCCA 1 cut(s) 983
MluCI AATT 3 cut(s) 317, 1267, 1634
MluNI TGGCCA 1 cut(s) 983
Mly113I GGCGCC 1 cut(s) 1359
MlyI GAGTC 4 cut(s) 26, 1106, 1154, 1384
MmeI TCCRAC 1 cut(s) 436
Mox20I TGGCCA 1 cut(s) 983
Mph1103I ATGCAT 1 cut(s) 380
MscI TGGCCA 1 cut(s) 983
MseI TTAA 4 cut(s) 309, 615, 840, 1709
MslI CAYNNNNRTG 3 cut(s) 593, 1332, 1580
Msp20I TGGCCA 1 cut(s) 983
MspA1I CMGCKG 2 cut(s) 499, 716
MspI CCGG 1 cut(s) 720
MspR9I CCNGG 3 cut(s) 332, 1139, 1347
Mva1269I GAATGC 1 cut(s) 380
MvaI CCWGG 3 cut(s) 332, 1139, 1347
MvnI CGCG 1 cut(s) 978
NarI GGCGCC 1 cut(s) 1359
NdeII GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
NlaIV GGNNCC 1 cut(s) 1360
NmuCI GTSAC 1 cut(s) 665
NsbI TGCGCA 1 cut(s) 243
NsiI ATGCAT 1 cut(s) 380
NspI RCATGY 2 cut(s) 261, 1497
PaeR7I CTCGAG 1 cut(s) 1647
PagI TCATGA 3 cut(s) 40, 124, 1333
PaqCI CACCTGC 1 cut(s) 961
PciI ACATGT 1 cut(s) 1493
PctI GAATGC 1 cut(s) 380
PfeI GAWTC 3 cut(s) 212, 1198, 1235
PkrI GCNGC 7 cut(s) 225, 498, 718, 776, 895, 1369, 1372
PleI GAGTC 4 cut(s) 25, 1105, 1153, 1384
PluTI GGCGCC 1 cut(s) 1362
PpsI GAGTC 4 cut(s) 25, 1105, 1153, 1384
PscI ACATGT 1 cut(s) 1493
PsiI TTATAA 1 cut(s) 1272
Psp124BI GAGCTC 1 cut(s) 1177
Psp6I CCWGG 3 cut(s) 330, 1137, 1345
PspEI GGTNACC 1 cut(s) 665
PspFI CCCAGC 1 cut(s) 89
PspGI CCWGG 3 cut(s) 330, 1137, 1345
PspN4I GGNNCC 1 cut(s) 1360
PspPI GGNCC 2 cut(s) 1049, 1253
PstI CTGCAG 2 cut(s) 416, 1369
PsuI RGATCY 1 cut(s) 458
PvuII CAGCTG 1 cut(s) 716
RsaI GTAC 1 cut(s) 649
RsaNI GTAC 1 cut(s) 648
RseI CAYNNNNRTG 3 cut(s) 593, 1332, 1580
SacI GAGCTC 1 cut(s) 1177
SaqAI TTAA 4 cut(s) 309, 615, 840, 1709
SatI GCNGC 7 cut(s) 224, 497, 717, 775, 894, 1368, 1371
Sau3AI GATC 7 cut(s) 458, 694, 799, 1036, 1286, 1439, 1572
Sau96I GGNCC 2 cut(s) 1049, 1253
SbfI CCTGCAGG 1 cut(s) 416
SchI GAGTC 4 cut(s) 26, 1106, 1154, 1384
ScrFI CCNGG 3 cut(s) 332, 1139, 1347
SdaI CCTGCAGG 1 cut(s) 416
SduI GDGCHC 5 cut(s) 426, 1177, 1225, 1326, 1545
SfaNI GCATC 6 cut(s) 20, 128, 333, 387, 934, 1630
SfcI CTRYAG 3 cut(s) 412, 816, 1365
SfoI GGCGCC 1 cut(s) 1360
Sfr274I CTCGAG 1 cut(s) 1647
SinI GGWCC 1 cut(s) 1253
SlaI CTCGAG 1 cut(s) 1647
SmiMI CAYNNNNRTG 3 cut(s) 593, 1332, 1580
SmlI CTYRAG 4 cut(s) 478, 671, 1516, 1647
SmoI CTYRAG 4 cut(s) 478, 671, 1516, 1647
SpeI ACTAGT 2 cut(s) 236, 557
Sse8387I CCTGCAGG 1 cut(s) 416
Sse9I AATT 3 cut(s) 317, 1267, 1634
SsiI CCGC 5 cut(s) 499, 580, 775, 967, 1474
SspDI GGCGCC 1 cut(s) 1358
SspI AATATT 1 cut(s) 1537
SspMI CTAG 6 cut(s) 230, 237, 537, 558, 609, 1226
SstI GAGCTC 1 cut(s) 1177
StyD4I CCNGG 3 cut(s) 330, 1137, 1345
StyI CCWWGG 1 cut(s) 1374
TaaI ACNGT 4 cut(s) 68, 204, 452, 592
TaiI ACGT 1 cut(s) 1006
TaqI TCGA 5 cut(s) 327, 641, 857, 1320, 1648
TaqII GACCGA 2 cut(s) 925, 1241
TasI AATT 3 cut(s) 317, 1267, 1634
TauI GCSGC 1 cut(s) 777
TfiI GAWTC 3 cut(s) 212, 1198, 1235
Tru1I TTAA 4 cut(s) 309, 615, 840, 1709
Tru9I TTAA 4 cut(s) 309, 615, 840, 1709
TscAI CASTG 7 cut(s) 63, 91, 589, 595, 1063, 1369, 1510
TseFI GTSAC 1 cut(s) 665
TseI GCWGC 6 cut(s) 223, 496, 716, 893, 1367, 1370
Tsp45I GTSAC 1 cut(s) 665
TspDTI ATGAA 5 cut(s) 29, 148, 238, 1004, 1322
TspGWI ACGGA 1 cut(s) 1006
TspRI CASTG 7 cut(s) 63, 91, 589, 595, 1063, 1369, 1510
VpaK11BI GGWCC 1 cut(s) 1253
XagI CCTNNNNNAGG 1 cut(s) 1334
XbaI TCTAGA 1 cut(s) 608
XceI RCATGY 2 cut(s) 261, 1497
XcmI CCANNNNNNNNNTGG 1 cut(s) 353
XhoI CTCGAG 1 cut(s) 1647
XmiI GTMKAC 1 cut(s) 636
XspI CTAG 6 cut(s) 230, 237, 537, 558, 609, 1226
Zsp2I ATGCAT 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.