Rmu_sc0000744.1_g000130

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000744.1
OG0000153
Physical Location & Seq
Forward (+)
452998 .. 466890
13893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000744.1_g000130.1.cds

Sequence Viewer

Length: 2001 bp
atgaatgactataaattctcaagcttatggaggatgggatgggagggaaaaacaatggttccttctcccataattgattgcaaggtggaggcgtctagagcttcttggaggttggaggagggagatttttgttgggattttggaggatgggagttgagaggcttttgtatagacttggggttcttacccgaaaaaggacggagtagtgatcccagcagcaactcgatggaaacgacattcttggtttggagaagacgactccaacgtccttcttgggctatgggctctaatgttgtggtctttgggttacaagtgcgattgcctattgctggtgtgatgtcgtcgattcgctgcagtccctgttttaatctcatcatggctctcgaggtgtgtagtttagttgatcaccatttcgtgcttgaggatggtcttaagaaggactttagaggcaattatgaaacttccagagatgtcagtcttgagcagatttcaaggctactgattgagagaggggattatccggcagttcccataaactttgagtatccctgtggtttagttacgggatggccacaatgggttgactatgaactaggagatgaggctacgagaatcagactttcagaggctgctgttctttcttccgtattcatctctgcccgttgtgatatcaacagggatgtggagtctcttcgtcatgtagttcgaaggtggaatcctcacacgcatacttttgtttgcgaatggggagagtttacccctaccttggaggatgtcttgaatattatgaggcttcccattactggttccgtcaaccctcttggctttgattttgactcagagaagttgcaggttcttgtagaaggggcttccagtattaaaggaagtaagcgccgtttctcgaattgggtgaagcatttttggggtgttaccgaaaatggggtatttgtcccagctctaggtcgggttgaactgtacatgactgtttgcccaaacttcattccgtccatcagtgaggataaggaagacttggatatcttccctgttgtttattcccctgacagagtgatgcggcaacttggttgccttcaggacgttccctcacctccacctcgctctcttaactctaagatcacaagcttttctcatatggagcgtagatgtgtacttgacttttctggcagaattgcggacttcccatctcagttgccagggaatgctgcgaatgctaacgcctcccctgcttatagttgttattggaggggagtgttgtgcaggctttttgtggaagccggcggtcctcagctacagttgggatctattaccagcagcagattagctagccccaaggctgtactgacttatgccgaaaagcataacctcacgtataccgaagtgtacagtgatggcaccagaaaggttgtcggctatttgaagggttctgaagctaagagggtgaagggagagggaaagaagtgcgataagaaaataggtgataaaggtgatgcgagggagcacgacactcagaagcctgttcggcgtttcaagcccaaggtggattttgacaagtttatgcatacgacccaacacggggtcaaactgatgatccctccaagcattccgcttcaaaagaacaaggaagtcaagaagaaaagatcttcaacaccccgagcaggtggtacttcccttacaaagcaagtaaatgctaccaatttcgaagtgaagaaaagggtgaaaagggaggctggtgcagattttgatgtccctctccgtcgaagcaaccgtgtgaaatccaagagttctcctctacctcgtggtcctccagcttatcttgagttatctgattctgatcatggagagggttctcaagggggtccagctgatccttctaaagaagatcatactactccttcaaaaggggcttctgatcatctgtctgaagtgtttcccatggttagccaagatagtgacaaccagatcacactccatggcacctgttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

666

Amino Acids

74.66

Weight (kDa)

8.63

Isoelectric Point (pI)

47.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1664
AasI GACNNNNNNGTC 1 cut(s) 264
Acc36I ACCTGC 2 cut(s) 841, 1664
AccB1I GGYRCC 2 cut(s) 1409, 1991
AccI GTMKAC 1 cut(s) 1388
AciI CCGC 4 cut(s) 1072, 1190, 1296, 1622
AclWI GGATC 4 cut(s) 203, 1324, 1600, 1877
AcoI YGGCCR 1 cut(s) 569
AcsI RAATTY 1 cut(s) 14
AcuI CTGAAG 3 cut(s) 1073, 1464, 1959
AcyI GRCGYC 1 cut(s) 92
AfaI GTAC 5 cut(s) 977, 1167, 1356, 1400, 1681
AflII CTTAAG 1 cut(s) 431
AgsI TTSAA 8 cut(s) 492, 781, 971, 1435, 1546, 1628, 1662, 1914
AjnI CCWGG 1 cut(s) 1210
AluBI AGCT 9 cut(s) 24, 101, 956, 1140, 1306, 1340, 1448, 1826, 1880
AluI AGCT 9 cut(s) 24, 101, 956, 1140, 1306, 1340, 1448, 1826, 1880
Alw21I GWGCWC 1 cut(s) 1518
Alw26I GTCTC 1 cut(s) 693
AlwI GGATC 4 cut(s) 203, 1324, 1600, 1877
AlwNI CAGNNNCTG 2 cut(s) 360, 629
Ama87I CYCGRG 2 cut(s) 383, 1668
AoxI GGCC 1 cut(s) 569
ApeKI GCWGC 5 cut(s) 216, 351, 629, 1220, 1329
ApoI RAATTY 1 cut(s) 14
Asp700I GAANNNNTTC 1 cut(s) 1944
AspLEI GCGC 1 cut(s) 894
AspS9I GGNCC 3 cut(s) 1298, 1817, 1874
AsuHPI GGTGA 7 cut(s) 398, 922, 1095, 1468, 1505, 1514, 1744
AsuII TTCGAA 2 cut(s) 706, 1716
AsuNHI GCTAGC 1 cut(s) 1340
AvaI CYCGRG 2 cut(s) 383, 1668
AvaII GGWCC 3 cut(s) 1298, 1817, 1874
BalI TGGCCA 1 cut(s) 571
BanI GGYRCC 2 cut(s) 1409, 1991
BanII GRGCYC 1 cut(s) 287
BauI CACGAG 1 cut(s) 1812
BbsI GAAGAC 2 cut(s) 259, 1032
Bbv12I GWGCWC 1 cut(s) 1518
BbvCI CCTCAGC 1 cut(s) 1302
BbvI GCAGC 5 cut(s) 228, 338, 616, 1207, 1341
BccI CCATC 9 cut(s) 28, 33, 141, 220, 419, 561, 1016, 1207, 1400
BceAI ACGGC 1 cut(s) 879
BciT130I CCWGG 1 cut(s) 1212
BciVI GTATCC 1 cut(s) 555
BclI TGATCA 3 cut(s) 403, 1849, 1927
BcoDI GTCTC 1 cut(s) 693
BfaI CTAG 4 cut(s) 96, 593, 959, 1341
BfmI CTRYAG 2 cut(s) 352, 1307
BfoI RGCGCY 1 cut(s) 895
BfrI CTTAAG 1 cut(s) 431
BfuAI ACCTGC 2 cut(s) 841, 1664
BfuI GTATCC 1 cut(s) 555
BglI GCCNNNNNGGC 1 cut(s) 1537
BglII AGATCT 1 cut(s) 1655
BisI GCNGC 6 cut(s) 217, 352, 630, 1073, 1221, 1330
BlsI GCNGC 6 cut(s) 218, 353, 631, 1074, 1222, 1331
Bme1390I CCNGG 1 cut(s) 1212
Bme18I GGWCC 3 cut(s) 1298, 1817, 1874
BmeT110I CYCGRG 2 cut(s) 383, 1668
BmgT120I GGNCC 3 cut(s) 1298, 1817, 1874
BmiI GGNNCC 5 cut(s) 60, 808, 1411, 1875, 1993
BmrFI CCNGG 1 cut(s) 1212
BmsI GCATC 2 cut(s) 1059, 1495
BmtI GCTAGC 1 cut(s) 1344
BpiI GAAGAC 2 cut(s) 259, 1032
BplI GAGNNNNNCTC 2 cut(s) 1789, 1821
BpmI CTGGAG 1 cut(s) 1806
Bpu10I CCTNAGC 1 cut(s) 1302
Bpu14I TTCGAA 2 cut(s) 706, 1716
BpuEI CTTGAG 5 cut(s) 4, 440, 500, 1851, 1853
BsaAI YACGTR 1 cut(s) 1386
BsaBI GATNNNNATC 1 cut(s) 1848
BsaHI GRCGYC 1 cut(s) 92
BsaJI CCNNGG 6 cut(s) 765, 1211, 1347, 1551, 1950, 1987
Bse118I RCCGGY 1 cut(s) 1292
Bse1I ACTGG 2 cut(s) 808, 873
Bse8I GATNNNNATC 1 cut(s) 1848
BseBI CCWGG 1 cut(s) 1212
BseDI CCNNGG 6 cut(s) 765, 1211, 1347, 1551, 1950, 1987
BseGI GGATG 7 cut(s) 39, 44, 152, 430, 572, 685, 778
BseJI GATNNNNATC 1 cut(s) 1848
BseMII CTCAG 4 cut(s) 852, 1217, 1316, 1538
BseNI ACTGG 2 cut(s) 808, 873
BseRI GAGGAG 2 cut(s) 131, 1794
BseXI GCAGC 5 cut(s) 228, 338, 616, 1207, 1341
BseYI CCCAGC 2 cut(s) 212, 952
BsgI GTGCAG 2 cut(s) 1294, 1770
BshFI GGCC 1 cut(s) 571
BshNI GGYRCC 2 cut(s) 1409, 1991
BsiHKAI GWGCWC 1 cut(s) 1518
BsiHKCI CYCGRG 2 cut(s) 383, 1668
BsiSI CCGG 2 cut(s) 521, 1293
BslFI GGGAC 3 cut(s) 342, 935, 1748
BsmAI GTCTC 1 cut(s) 693
BsmFI GGGAC 3 cut(s) 342, 935, 1748
BsmI GAATGC 3 cut(s) 1222, 1231, 1617
BsnI GGCC 1 cut(s) 571
BsoBI CYCGRG 2 cut(s) 383, 1668
Bsp119I TTCGAA 2 cut(s) 706, 1716
Bsp1286I GDGCHC 2 cut(s) 287, 1518
Bsp1407I TGTACA 2 cut(s) 975, 1398
Bsp19I CCATGG 2 cut(s) 1950, 1987
BspACI CCGC 4 cut(s) 1072, 1190, 1296, 1622
BspANI GGCC 1 cut(s) 571
BspCNI CTCAG 4 cut(s) 851, 1216, 1315, 1537
BspLI GGNNCC 5 cut(s) 60, 808, 1411, 1875, 1993
BspMAI CTGCAG 1 cut(s) 356
BspMI ACCTGC 2 cut(s) 841, 1664
BspOI GCTAGC 1 cut(s) 1344
BspPI GGATC 4 cut(s) 203, 1324, 1600, 1877
BspT104I TTCGAA 2 cut(s) 706, 1716
BspT107I GGYRCC 2 cut(s) 1409, 1991
BspTI CTTAAG 1 cut(s) 431
BsrFI RCCGGY 1 cut(s) 1292
BsrGI TGTACA 2 cut(s) 975, 1398
BsrI ACTGG 2 cut(s) 808, 873
BssAI RCCGGY 1 cut(s) 1292
BssECI CCNNGG 6 cut(s) 765, 1211, 1347, 1551, 1950, 1987
BssNAI GTATAC 1 cut(s) 1389
BssNI GRCGYC 1 cut(s) 92
BssSI CACGAG 1 cut(s) 1812
BssT1I CCWWGG 5 cut(s) 765, 1347, 1551, 1950, 1987
Bst1107I GTATAC 1 cut(s) 1389
Bst2BI CACGAG 1 cut(s) 1812
Bst2UI CCWGG 1 cut(s) 1212
Bst4CI ACNGT 5 cut(s) 975, 985, 1311, 1403, 1784
Bst6I CTCTTC 1 cut(s) 696
BstACI GRCGYC 1 cut(s) 92
BstAFI CTTAAG 1 cut(s) 431
BstAUI TGTACA 2 cut(s) 975, 1398
BstBAI YACGTR 1 cut(s) 1386
BstBI TTCGAA 2 cut(s) 706, 1716
BstC8I GCNNGC 3 cut(s) 1277, 1294, 1342
BstDEI CTNAG 6 cut(s) 838, 1128, 1203, 1302, 1449, 1524
BstDSI CCRYGG 2 cut(s) 1950, 1987
BstENI CCTNNNNNAGG 1 cut(s) 1914
BstF5I GGATG 7 cut(s) 39, 44, 152, 430, 572, 685, 778
BstH2I RGCGCY 1 cut(s) 895
BstHHI GCGC 1 cut(s) 894
BstMAI GTCTC 1 cut(s) 693
BstMWI GCNNNNNNNGC 5 cut(s) 98, 1226, 1241, 1537, 1546
BstNI CCWGG 1 cut(s) 1212
BstSCI CCNGG 1 cut(s) 1210
BstSFI CTRYAG 2 cut(s) 352, 1307
BstV1I GCAGC 5 cut(s) 228, 338, 616, 1207, 1341
BstV2I GAAGAC 2 cut(s) 259, 1032
BstX2I RGATCY 2 cut(s) 1316, 1655
BstYI RGATCY 2 cut(s) 1316, 1655
BstZ17I GTATAC 1 cut(s) 1389
BsuI GTATCC 1 cut(s) 555
BsuRI GGCC 1 cut(s) 571
BtgI CCRYGG 2 cut(s) 1950, 1987
BtsCI GGATG 7 cut(s) 39, 44, 152, 430, 572, 685, 778
BtsIMutI CAGTG 2 cut(s) 1018, 1408
BveI ACCTGC 2 cut(s) 841, 1664
Cac8I GCNNGC 3 cut(s) 1277, 1294, 1342
CaiI CAGNNNCTG 2 cut(s) 360, 629
CfoI GCGC 1 cut(s) 894
Cfr10I RCCGGY 1 cut(s) 1292
Cfr13I GGNCC 3 cut(s) 1298, 1817, 1874
CseI GACGC 1 cut(s) 81
Csp6I GTAC 5 cut(s) 976, 1166, 1355, 1399, 1680
CviAII CATG 6 cut(s) 376, 698, 979, 1853, 1951, 1988
CviQI GTAC 5 cut(s) 976, 1166, 1355, 1399, 1680
DdeI CTNAG 6 cut(s) 838, 1128, 1203, 1302, 1449, 1524
DrdI GACNNNNNNGTC 1 cut(s) 264
DseDI GACNNNNNNGTC 1 cut(s) 264
EaeI YGGCCR 1 cut(s) 569
Eam1104I CTCTTC 1 cut(s) 696
EarI CTCTTC 1 cut(s) 696
Eco130I CCWWGG 5 cut(s) 765, 1347, 1551, 1950, 1987
Eco24I GRGCYC 1 cut(s) 287
Eco32I GATATC 2 cut(s) 670, 1036
Eco47I GGWCC 3 cut(s) 1298, 1817, 1874
Eco57I CTGAAG 3 cut(s) 1073, 1464, 1959
Eco88I CYCGRG 2 cut(s) 383, 1668
EcoNI CCTNNNNNAGG 1 cut(s) 1914
EcoRII CCWGG 1 cut(s) 1210
EcoRV GATATC 2 cut(s) 670, 1036
EcoT14I CCWWGG 5 cut(s) 765, 1347, 1551, 1950, 1987
EcoT22I ATGCAT 1 cut(s) 1578
EcoT38I GRGCYC 1 cut(s) 287
ErhI CCWWGG 5 cut(s) 765, 1347, 1551, 1950, 1987
FaeI CATG 6 cut(s) 379, 701, 982, 1856, 1954, 1991
FalI AAGNNNNNCTT 4 cut(s) 425, 457, 1013, 1045
FaqI GGGAC 3 cut(s) 342, 935, 1748
FatI CATG 6 cut(s) 375, 697, 978, 1852, 1950, 1987
FauNDI CATATG 1 cut(s) 1149
FbaI TGATCA 3 cut(s) 403, 1849, 1927
FblI GTMKAC 1 cut(s) 1388
Fnu4HI GCNGC 6 cut(s) 217, 352, 630, 1073, 1221, 1330
FokI GGATG 7 cut(s) 46, 51, 159, 437, 579, 692, 785
FriOI GRGCYC 1 cut(s) 287
Fsp4HI GCNGC 6 cut(s) 217, 352, 630, 1073, 1221, 1330
FspBI CTAG 4 cut(s) 96, 593, 959, 1341
GlaI GCGC 1 cut(s) 893
GluI GCNGC 6 cut(s) 217, 352, 630, 1073, 1221, 1330
GsaI CCCAGC 2 cut(s) 216, 956
GsuI CTGGAG 1 cut(s) 1806
HaeII RGCGCY 1 cut(s) 895
HaeIII GGCC 1 cut(s) 571
HapII CCGG 2 cut(s) 521, 1293
HgaI GACGC 1 cut(s) 81
HhaI GCGC 1 cut(s) 894
Hin1I GRCGYC 1 cut(s) 92
Hin1II CATG 6 cut(s) 379, 701, 982, 1856, 1954, 1991
Hin6I GCGC 1 cut(s) 892
HinP1I GCGC 1 cut(s) 892
HincII GTYRAC 2 cut(s) 583, 814
HindII GTYRAC 2 cut(s) 583, 814
HindIII AAGCTT 2 cut(s) 22, 1138
HinfI GANTC 7 cut(s) 258, 346, 612, 686, 715, 836, 1844
HpaII CCGG 2 cut(s) 521, 1293
HphI GGTGA 7 cut(s) 398, 922, 1095, 1468, 1505, 1514, 1744
Hpy166II GTNNAC 6 cut(s) 583, 756, 814, 1166, 1389, 1399
Hpy188I TCNGA 9 cut(s) 617, 625, 841, 1444, 1527, 1843, 1849, 1927, 1939
Hpy188III TCNNGA 9 cut(s) 96, 383, 465, 479, 778, 901, 1091, 1645, 1832
Hpy8I GTNNAC 6 cut(s) 583, 756, 814, 1166, 1389, 1399
Hpy99I CGWCG 2 cut(s) 346, 1776
HpyCH4III ACNGT 5 cut(s) 975, 985, 1311, 1403, 1784
HpyCH4IV ACGT 3 cut(s) 265, 1095, 1385
HpyCH4V TGCA 6 cut(s) 81, 354, 850, 1275, 1576, 1751
HpyF10VI GCNNNNNNNGC 5 cut(s) 98, 1226, 1241, 1537, 1546
HpyF3I CTNAG 6 cut(s) 838, 1128, 1203, 1302, 1449, 1524
HpySE526I ACGT 3 cut(s) 265, 1095, 1385
Hsp92I GRCGYC 1 cut(s) 92
Hsp92II CATG 6 cut(s) 379, 701, 982, 1856, 1954, 1991
HspAI GCGC 1 cut(s) 892
KroI GCCGGC 1 cut(s) 1292
KroNI GCCGGC 1 cut(s) 1294
Ksp22I TGATCA 3 cut(s) 403, 1849, 1927
LmnI GCTCC 2 cut(s) 1153, 1513
Lsp1109I GCAGC 5 cut(s) 228, 338, 616, 1207, 1341
LweI GCATC 2 cut(s) 1059, 1495
MaeI CTAG 4 cut(s) 96, 593, 959, 1341
MaeII ACGT 3 cut(s) 265, 1095, 1385
MaeIII GTNAC 4 cut(s) 306, 559, 928, 1967
MboII GAAGA 9 cut(s) 264, 633, 683, 1030, 1037, 1650, 1660, 1735, 1907
MflI RGATCY 2 cut(s) 1316, 1655
MhlI GDGCHC 2 cut(s) 287, 1518
MlsI TGGCCA 1 cut(s) 571
MluCI AATT 6 cut(s) 14, 72, 451, 904, 1185, 1711
MluNI TGGCCA 1 cut(s) 571
MlyI GAGTC 3 cut(s) 252, 695, 830
MmeI TCCRAC 2 cut(s) 93, 286
Mox20I TGGCCA 1 cut(s) 571
Mph1103I ATGCAT 1 cut(s) 1578
MroNI GCCGGC 1 cut(s) 1292
MroXI GAANNNNTTC 1 cut(s) 1944
MscI TGGCCA 1 cut(s) 571
MseI TTAA 4 cut(s) 366, 432, 879, 1122
Msp20I TGGCCA 1 cut(s) 571
MspA1I CMGCKG 1 cut(s) 1880
MspCI CTTAAG 1 cut(s) 431
MspI CCGG 2 cut(s) 521, 1293
MspR9I CCNGG 1 cut(s) 1212
Mva1269I GAATGC 3 cut(s) 1222, 1231, 1617
MvaI CCWGG 1 cut(s) 1212
MwoI GCNNNNNNNGC 5 cut(s) 98, 1226, 1241, 1537, 1546
NaeI GCCGGC 1 cut(s) 1294
NcoI CCATGG 2 cut(s) 1950, 1987
NdeI CATATG 1 cut(s) 1149
NgoMIV GCCGGC 1 cut(s) 1292
NheI GCTAGC 1 cut(s) 1340
NlaIII CATG 6 cut(s) 379, 701, 982, 1856, 1954, 1991
NlaIV GGNNCC 5 cut(s) 60, 808, 1411, 1875, 1993
NmuCI GTSAC 1 cut(s) 1967
NsiI ATGCAT 1 cut(s) 1578
NspV TTCGAA 2 cut(s) 706, 1716
PaeR7I CTCGAG 1 cut(s) 383
PaqCI CACCTGC 1 cut(s) 1664
PcsI WCGNNNNNNNCGW 3 cut(s) 230, 262, 1780
PctI GAATGC 3 cut(s) 1222, 1231, 1617
PdiI GCCGGC 1 cut(s) 1294
PdmI GAANNNNTTC 1 cut(s) 1944
PfeI GAWTC 4 cut(s) 346, 612, 715, 1844
PkrI GCNGC 6 cut(s) 218, 353, 631, 1074, 1222, 1331
PleI GAGTC 3 cut(s) 252, 694, 830
PpsI GAGTC 3 cut(s) 252, 694, 830
Ppu21I YACGTR 1 cut(s) 1386
Psp6I CCWGG 1 cut(s) 1210
PspFI CCCAGC 2 cut(s) 212, 952
PspGI CCWGG 1 cut(s) 1210
PspN4I GGNNCC 5 cut(s) 60, 808, 1411, 1875, 1993
PspPI GGNCC 3 cut(s) 1298, 1817, 1874
PstI CTGCAG 1 cut(s) 356
PstNI CAGNNNCTG 2 cut(s) 360, 629
PsuI RGATCY 2 cut(s) 1316, 1655
PvuII CAGCTG 1 cut(s) 1880
RsaI GTAC 5 cut(s) 977, 1167, 1356, 1400, 1681
RsaNI GTAC 5 cut(s) 976, 1166, 1355, 1399, 1680
SaqAI TTAA 4 cut(s) 366, 432, 879, 1122
SatI GCNGC 6 cut(s) 217, 352, 630, 1073, 1221, 1330
Sau96I GGNCC 3 cut(s) 1298, 1817, 1874
SchI GAGTC 3 cut(s) 252, 695, 830
ScrFI CCNGG 1 cut(s) 1212
SduI GDGCHC 2 cut(s) 287, 1518
SfaNI GCATC 2 cut(s) 1059, 1495
SfcI CTRYAG 2 cut(s) 352, 1307
Sfr274I CTCGAG 1 cut(s) 383
SfuI TTCGAA 2 cut(s) 706, 1716
SinI GGWCC 3 cut(s) 1298, 1817, 1874
SlaI CTCGAG 1 cut(s) 383
SmlI CTYRAG 7 cut(s) 19, 383, 419, 431, 479, 1832, 1866
SmoI CTYRAG 7 cut(s) 19, 383, 419, 431, 479, 1832, 1866
Sse9I AATT 6 cut(s) 14, 72, 451, 904, 1185, 1711
SsiI CCGC 4 cut(s) 1072, 1190, 1296, 1622
SspI AATATT 1 cut(s) 784
SspMI CTAG 4 cut(s) 96, 593, 959, 1341
StyD4I CCNGG 1 cut(s) 1210
StyI CCWWGG 5 cut(s) 765, 1347, 1551, 1950, 1987
TaaI ACNGT 5 cut(s) 975, 985, 1311, 1403, 1784
TaiI ACGT 3 cut(s) 268, 1098, 1388
TaqI TCGA 7 cut(s) 224, 344, 384, 706, 902, 1716, 1774
TasI AATT 6 cut(s) 14, 72, 451, 904, 1185, 1711
TatI WGTACW 4 cut(s) 975, 1165, 1354, 1398
TauI GCSGC 1 cut(s) 1075
TfiI GAWTC 4 cut(s) 346, 612, 715, 1844
Tru1I TTAA 4 cut(s) 366, 432, 879, 1122
Tru9I TTAA 4 cut(s) 366, 432, 879, 1122
TscAI CASTG 2 cut(s) 1018, 1408
TseFI GTSAC 1 cut(s) 1967
TseI GCWGC 5 cut(s) 216, 351, 629, 1220, 1329
Tsp45I GTSAC 1 cut(s) 1967
TspDTI ATGAA 5 cut(s) 17, 471, 603, 640, 988
TspGWI ACGGA 5 cut(s) 214, 634, 799, 993, 1760
TspRI CASTG 2 cut(s) 1018, 1408
Vha464I CTTAAG 1 cut(s) 431
VpaK11BI GGWCC 3 cut(s) 1298, 1817, 1874
XagI CCTNNNNNAGG 1 cut(s) 1914
XapI RAATTY 1 cut(s) 14
XbaI TCTAGA 1 cut(s) 95
XhoI CTCGAG 1 cut(s) 383
XmiI GTMKAC 1 cut(s) 1388
XmnI GAANNNNTTC 1 cut(s) 1944
XspI CTAG 4 cut(s) 96, 593, 959, 1341
Zsp2I ATGCAT 1 cut(s) 1578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.