Rw0G003510

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00122
OG0000153
Physical Location & Seq
Forward (+)
19779 .. 21899
2121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G003510.1

Sequence Viewer

Length: 1740 bp
ATGGCTCAAGTGTCTGAGTCTTCTCAACCTGTCGAACTTCGTGACCGTCACTTCTCTCTGGAGGATGGTCTAGTTCCGACTTCCACCACGAGGAATTGTGAAGGTAGCCCAGAGGAGGTATCCTGTGAATTTTCTGGGCACTTTGTTTCTCCCAAGTTCATATCCAGGTTGCTCATTGAGAGGGAGAGTACCCTGCAGTGCCTATATCCGGAATGGGTCAACTTTGAGGTACAACAGGAAGAGTTTGAAGAGGCCCTTATTGGAGCTGGAGTGAAGATTTCACTGTTTATTTCCGGCTTTTGTGAGGTTTACAAAGATGACATTTGCTTTCGCCATGTGGTGAGAAGATGGAGTCCTAAAACTCACACGTTCATCTGCTCTTGGGGGGAAGTTACTCCTTCTTTGGAAGATGTTTGCAATATTATGCGAATCCCGATCGTTAGAGATGGTAATCCCTTCAAGATAGAGCTAAATAAGGCGCAGAAGAAGAAGCTGCAGATTCTGGAAAAGGGTGCTTATGATTCTAAAGAAGTGTTCCGTTTTTGTTACTGGGTGAGACACTTTTGGGGCTCGACAGACCGAGGCAAGTTTAAGCATGGTGCAGATTTTCCCTATGAGAATGTGCAGCAGCGAGTCTTCCCGTTGGCCATTATGCTAGCAGCCGGTACTTGTTTCCCGCTTGCTCCTCTCTTCCTTAGTCATCTATATAGGAAGCTTGATCAGATTTCAAAGGATGATAAAGAAGGTGCGGGACAATGGTTCAAGAAGAAGGCCAAGAAAGGTGCATTTAGGCCTGCTGCTCTAGATGACATTAGGCAATTCAATTTCAGACCATATTTTACTGCTTATGGCTTTCAGACATTTCCTTTCTTTTATCCAGAGGGTAACTCGTCACCGTTCTTGGAATTAGTTGAGCTGCTTCTAGCTACTAGTGCGCAGTCCATAATAGCATGTGGCGATTTCTTTGACCTTGTGATGGAGAAGTATTCCCCTCATAGAGTTAAAAGGCAGTTTAGCATCGATCAGGATGTGCCATCGCATTTATCTTACGGTGGACATCTTGGGGACTGCATCATGGGTTTCACTCGGATAGATGGTATTTCTTGTAGGGGTATGCTCTCAGATAGTCTCGGGAAGAAAGACTGTGTTGGCTCCCCTACATCAACATTCTTGATGTTTTGGGAGTTGCAGCGGTGCGAGTTCAGGAGGTTTATTCAGACTGAACGTGTGGTTGGTCATCTTAAAGGTGGGGATGATTTAGAGGTGGACTTGACAAGAACAGAAGAGGGTGACAAGTATGCAACAAAAGGCAAAGTCAGGCCTTCCGAGAATAGAGAAGAAAGTAAAAAGAAGGTTTGCCGCTTCAAACCTAAGGTGGCAAAGAATCGCATCCCTCCTCCAGTAATCAAAAGTGCCTTTGGTGTTAGAGTGATACTGCCGTTGAGTTTAGCTGATGGAAAAGGGAAGAAAAGGAAAGCCGCTTCTTGCACAAGACCTAGTGGAGCTACTAAGCAAAAGGTTACAGTTGATGCCTCACCTGCTGTCCACAGGCAGAGCTCTCGCGTTGCTAACATGAGTTTTTCTAAACCTAAACCGTCGTCTAAAGGTGCTGCTCATGTTGATCTTAGTGACGCGCCAAGTGACAACATCGAAGGTAGGCCCCTTAGTGATAATGTCAGTACTCATGAGGAGAATGAATCTGATACTTACGAGGGAGACACCTGCGATGAGAGTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

579

Amino Acids

65.41

Weight (kDa)

8.32

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 98 - 247 3.1e-15 Plant mobile domain
PMD PF10536 260 - 348 1e-05 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1546, 1730
Acc16I TGCGCA 1 cut(s) 936
Acc36I ACCTGC 2 cut(s) 1546, 1730
AccII CGCG 2 cut(s) 1563, 1634
AccIII TCCGGA 1 cut(s) 208
AciI CCGC 5 cut(s) 677, 749, 1192, 1360, 1479
AcoI YGGCCR 1 cut(s) 645
AcsI RAATTY 1 cut(s) 128
AfaI GTAC 4 cut(s) 190, 231, 667, 1681
AfiI CCNNNNNNNGG 4 cut(s) 90, 115, 208, 976
AflIII ACRYGT 2 cut(s) 366, 1225
AgsI TTSAA 6 cut(s) 248, 460, 729, 763, 823, 1366
AhlI ACTAGT 1 cut(s) 929
AjnI CCWGG 1 cut(s) 164
AjuI GAANNNNNNNTTGG 2 cut(s) 1215, 1247
AluBI AGCT 9 cut(s) 266, 469, 493, 715, 916, 926, 1451, 1505, 1557
AluI AGCT 9 cut(s) 266, 469, 493, 715, 916, 926, 1451, 1505, 1557
Alw21I GWGCWC 1 cut(s) 1559
Alw26I GTCTC 3 cut(s) 550, 1133, 1710
AlwNI CAGNNNCTG 1 cut(s) 502
Ama87I CYCGRG 1 cut(s) 1130
Aor13HI TCCGGA 1 cut(s) 208
AoxI GGCC 6 cut(s) 252, 645, 771, 791, 1319, 1658
ApeKI GCWGC 8 cut(s) 493, 625, 628, 659, 797, 916, 1189, 1610
ApoI RAATTY 1 cut(s) 128
AspLEI GCGC 3 cut(s) 481, 937, 1636
AspS9I GGNCC 2 cut(s) 253, 1659
AsuHPI GGTGA 5 cut(s) 352, 565, 885, 1301, 1527
AsuNHI GCTAGC 1 cut(s) 655
AvaI CYCGRG 1 cut(s) 1130
AxyI CCTNAGG 1 cut(s) 1371
BaeGI GKGCMC 1 cut(s) 141
BaeI ACNNNNGTAYC 2 cut(s) 1424, 1457
BalI TGGCCA 1 cut(s) 647
BanII GRGCYC 2 cut(s) 572, 1559
BauI CACGAG 1 cut(s) 88
BbsI GAAGAC 2 cut(s) 12, 628
Bbv12I GWGCWC 1 cut(s) 1559
BbvI GCAGC 8 cut(s) 480, 637, 640, 671, 784, 903, 1201, 1597
BccI CCATC 7 cut(s) 59, 342, 440, 970, 1042, 1088, 1448
BceAI ACGGC 1 cut(s) 1423
BcgI CGANNNNNNTGC 2 cut(s) 1541, 1575
BciT130I CCWGG 1 cut(s) 166
BciVI GTATCC 1 cut(s) 130
BclI TGATCA 1 cut(s) 718
BcoDI GTCTC 3 cut(s) 550, 1133, 1710
BcuI ACTAGT 1 cut(s) 929
BfaI CTAG 6 cut(s) 71, 656, 803, 923, 930, 1497
BfmI CTRYAG 2 cut(s) 194, 494
BfuAI ACCTGC 2 cut(s) 1546, 1730
BfuI GTATCC 1 cut(s) 130
BmcAI AGTACT 1 cut(s) 1681
Bme1390I CCNGG 1 cut(s) 166
BmeT110I CYCGRG 1 cut(s) 1130
BmgT120I GGNCC 2 cut(s) 253, 1659
BmiI GGNNCC 2 cut(s) 1153, 1661
BmrFI CCNGG 1 cut(s) 166
BmrI ACTGGG 1 cut(s) 559
BmsI GCATC 4 cut(s) 1026, 1080, 1398, 1519
BmtI GCTAGC 1 cut(s) 659
BmuI ACTGGG 1 cut(s) 559
BpiI GAAGAC 2 cut(s) 12, 628
BplI GAGNNNNNCTC 2 cut(s) 872, 904
BpmI CTGGAG 3 cut(s) 80, 288, 1383
Bsa29I ATCGAT 1 cut(s) 1020
BsaBI GATNNNNATC 1 cut(s) 450
BsaJI CCNNGG 1 cut(s) 580
BsaWI WCCGGW 1 cut(s) 208
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 4 cut(s) 90, 115, 208, 976
Bse118I RCCGGY 1 cut(s) 662
Bse1I ACTGG 2 cut(s) 554, 1400
Bse21I CCTNAGG 1 cut(s) 1371
Bse8I GATNNNNATC 1 cut(s) 450
BseAI TCCGGA 1 cut(s) 208
BseBI CCWGG 1 cut(s) 166
BseCI ATCGAT 1 cut(s) 1020
BseDI CCNNGG 1 cut(s) 580
BseGI GGATG 5 cut(s) 70, 739, 1033, 1258, 1389
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 4 cut(s) 90, 115, 208, 976
BseMII CTCAG 2 cut(s) 6, 1134
BseNI ACTGG 2 cut(s) 554, 1400
BseRI GAGGAG 4 cut(s) 128, 675, 1386, 1703
BseSI GKGCMC 1 cut(s) 141
BseXI GCAGC 8 cut(s) 480, 637, 640, 671, 784, 903, 1201, 1597
BsgI GTGCAG 2 cut(s) 621, 644
Bsh1236I CGCG 2 cut(s) 1563, 1634
Bsh1285I CGRYCG 1 cut(s) 438
BshFI GGCC 6 cut(s) 254, 647, 773, 793, 1321, 1660
BshVI ATCGAT 1 cut(s) 1020
BsiEI CGRYCG 1 cut(s) 438
BsiHKAI GWGCWC 1 cut(s) 1559
BsiHKCI CYCGRG 1 cut(s) 1130
BsiSI CCGG 3 cut(s) 209, 294, 663
BslFI GGGAC 2 cut(s) 765, 1079
BslI CCNNNNNNNGG 4 cut(s) 90, 115, 208, 976
BsmAI GTCTC 3 cut(s) 550, 1133, 1710
BsmFI GGGAC 2 cut(s) 765, 1079
BsnI GGCC 6 cut(s) 254, 647, 773, 793, 1321, 1660
BsoBI CYCGRG 1 cut(s) 1130
Bsp1286I GDGCHC 3 cut(s) 141, 572, 1559
Bsp13I TCCGGA 1 cut(s) 208
Bsp143I GATC 4 cut(s) 435, 718, 1021, 1621
BspACI CCGC 5 cut(s) 677, 749, 1192, 1360, 1479
BspANI GGCC 6 cut(s) 254, 647, 773, 793, 1321, 1660
BspCNI CTCAG 2 cut(s) 7, 1133
BspDI ATCGAT 1 cut(s) 1020
BspEI TCCGGA 1 cut(s) 208
BspFNI CGCG 2 cut(s) 1563, 1634
BspHI TCATGA 1 cut(s) 1684
BspLI GGNNCC 2 cut(s) 1153, 1661
BspMAI CTGCAG 2 cut(s) 198, 498
BspMI ACCTGC 2 cut(s) 1546, 1730
BspOI GCTAGC 1 cut(s) 659
BsrFI RCCGGY 1 cut(s) 662
BsrI ACTGG 2 cut(s) 554, 1400
BssAI RCCGGY 1 cut(s) 662
BssECI CCNNGG 1 cut(s) 580
BssMI GATC 4 cut(s) 435, 718, 1021, 1621
BssSI CACGAG 1 cut(s) 88
Bst2BI CACGAG 1 cut(s) 88
Bst2UI CCWGG 1 cut(s) 166
Bst4CI ACNGT 7 cut(s) 47, 285, 897, 1052, 1145, 1525, 1596
Bst6I CTCTTC 4 cut(s) 234, 243, 695, 1278
BstC8I GCNNGC 3 cut(s) 657, 681, 795
BstDEI CTNAG 7 cut(s) 15, 695, 1120, 1371, 1509, 1625, 1664
BstF5I GGATG 5 cut(s) 70, 739, 1033, 1258, 1389
BstFNI CGCG 2 cut(s) 1563, 1634
BstHHI GCGC 3 cut(s) 481, 937, 1636
BstKTI GATC 4 cut(s) 438, 721, 1024, 1624
BstMAI GTCTC 3 cut(s) 550, 1133, 1710
BstMBI GATC 4 cut(s) 435, 718, 1021, 1621
BstMCI CGRYCG 1 cut(s) 438
BstMWI GCNNNNNNNGC 2 cut(s) 932, 1538
BstNI CCWGG 1 cut(s) 166
BstNSI RCATGY 1 cut(s) 954
BstSCI CCNGG 1 cut(s) 164
BstSFI CTRYAG 2 cut(s) 194, 494
BstSLI GKGCMC 1 cut(s) 141
BstUI CGCG 2 cut(s) 1563, 1634
BstV1I GCAGC 8 cut(s) 480, 637, 640, 671, 784, 903, 1201, 1597
BstV2I GAAGAC 2 cut(s) 12, 628
Bsu15I ATCGAT 1 cut(s) 1020
Bsu36I CCTNAGG 1 cut(s) 1371
BsuI GTATCC 1 cut(s) 130
BsuRI GGCC 6 cut(s) 254, 647, 773, 793, 1321, 1660
BsuTUI ATCGAT 1 cut(s) 1020
BtgZI GCGATG 1 cut(s) 1020
BtsCI GGATG 5 cut(s) 70, 739, 1033, 1258, 1389
BtsI GCAGTG 1 cut(s) 203
BtsIMutI CAGTG 2 cut(s) 203, 281
BveI ACCTGC 2 cut(s) 1546, 1730
Cac8I GCNNGC 3 cut(s) 657, 681, 795
CaiI CAGNNNCTG 1 cut(s) 502
CciI TCATGA 1 cut(s) 1684
CfoI GCGC 3 cut(s) 481, 937, 1636
Cfr10I RCCGGY 1 cut(s) 662
Cfr13I GGNCC 2 cut(s) 253, 1659
ClaI ATCGAT 1 cut(s) 1020
CseI GACGC 1 cut(s) 1640
Csp6I GTAC 4 cut(s) 189, 230, 666, 1680
CviAII CATG 7 cut(s) 335, 596, 951, 1075, 1573, 1616, 1685
CviQI GTAC 4 cut(s) 189, 230, 666, 1680
DdeI CTNAG 7 cut(s) 15, 695, 1120, 1371, 1509, 1625, 1664
DpnI GATC 4 cut(s) 437, 720, 1023, 1623
DpnII GATC 4 cut(s) 435, 718, 1021, 1621
EaeI YGGCCR 1 cut(s) 645
Eam1104I CTCTTC 4 cut(s) 234, 243, 695, 1278
EarI CTCTTC 4 cut(s) 234, 243, 695, 1278
Ecl136II GAGCTC 1 cut(s) 1557
Eco147I AGGCCT 2 cut(s) 793, 1321
Eco24I GRGCYC 2 cut(s) 572, 1559
Eco53kI GAGCTC 1 cut(s) 1557
Eco81I CCTNAGG 1 cut(s) 1371
Eco88I CYCGRG 1 cut(s) 1130
EcoICRI GAGCTC 1 cut(s) 1557
EcoO109I RGGNCCY 2 cut(s) 253, 1659
EcoRII CCWGG 1 cut(s) 164
EcoT38I GRGCYC 2 cut(s) 572, 1559
FaeI CATG 7 cut(s) 338, 599, 954, 1078, 1576, 1619, 1688
FalI AAGNNNNNCTT 2 cut(s) 240, 272
FaqI GGGAC 2 cut(s) 765, 1079
FatI CATG 7 cut(s) 334, 595, 950, 1074, 1572, 1615, 1684
FauI CCCGC 2 cut(s) 684, 742
FbaI TGATCA 1 cut(s) 718
FokI GGATG 5 cut(s) 77, 746, 1040, 1265, 1376
FriOI GRGCYC 2 cut(s) 572, 1559
FspBI CTAG 6 cut(s) 71, 656, 803, 923, 930, 1497
FspI TGCGCA 1 cut(s) 936
GlaI GCGC 3 cut(s) 480, 936, 1635
GsuI CTGGAG 3 cut(s) 80, 288, 1383
HaeIII GGCC 6 cut(s) 254, 647, 773, 793, 1321, 1660
HapII CCGG 3 cut(s) 209, 294, 663
HgaI GACGC 1 cut(s) 1640
HhaI GCGC 3 cut(s) 481, 937, 1636
Hin1II CATG 7 cut(s) 338, 599, 954, 1078, 1576, 1619, 1688
Hin6I GCGC 3 cut(s) 479, 935, 1634
HinP1I GCGC 3 cut(s) 479, 935, 1634
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HindIII AAGCTT 1 cut(s) 713
HinfI GANTC 8 cut(s) 17, 352, 429, 499, 521, 633, 1384, 1697
HpaII CCGG 3 cut(s) 209, 294, 663
HphI GGTGA 5 cut(s) 352, 565, 885, 1301, 1527
Hpy166II GTNNAC 5 cut(s) 220, 310, 1055, 1267, 1546
Hpy8I GTNNAC 5 cut(s) 220, 310, 1055, 1267, 1546
Hpy99I CGWCG 1 cut(s) 1600
HpyAV CCTTC 8 cut(s) 95, 408, 466, 737, 763, 1332, 1345, 1646
HpyCH4III ACNGT 7 cut(s) 47, 285, 897, 1052, 1145, 1525, 1596
HpyCH4IV ACGT 2 cut(s) 368, 1225
HpyF10VI GCNNNNNNNGC 2 cut(s) 932, 1538
HpyF3I CTNAG 7 cut(s) 15, 695, 1120, 1371, 1509, 1625, 1664
HpySE526I ACGT 2 cut(s) 368, 1225
Hsp92II CATG 7 cut(s) 338, 599, 954, 1078, 1576, 1619, 1688
HspAI GCGC 3 cut(s) 479, 935, 1634
Kpn2I TCCGGA 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 718
Kzo9I GATC 4 cut(s) 435, 718, 1021, 1621
LmnI GCTCC 4 cut(s) 263, 688, 1157, 1502
Lsp1109I GCAGC 8 cut(s) 480, 637, 640, 671, 784, 903, 1201, 1597
LweI GCATC 4 cut(s) 1026, 1080, 1398, 1519
MaeI CTAG 6 cut(s) 71, 656, 803, 923, 930, 1497
MaeII ACGT 2 cut(s) 368, 1225
MalI GATC 4 cut(s) 437, 720, 1023, 1623
MboI GATC 4 cut(s) 435, 718, 1021, 1621
MhlI GDGCHC 3 cut(s) 141, 572, 1559
MlsI TGGCCA 1 cut(s) 647
MluCI AATT 5 cut(s) 94, 128, 818, 823, 905
MluNI TGGCCA 1 cut(s) 647
MlyI GAGTC 3 cut(s) 26, 361, 642
MmeI TCCRAC 1 cut(s) 101
Mox20I TGGCCA 1 cut(s) 647
MroI TCCGGA 1 cut(s) 208
MscI TGGCCA 1 cut(s) 647
MseI TTAA 3 cut(s) 591, 1002, 1242
Msp20I TGGCCA 1 cut(s) 647
MspA1I CMGCKG 1 cut(s) 1192
MspI CCGG 3 cut(s) 209, 294, 663
MspR9I CCNGG 1 cut(s) 166
MvaI CCWGG 1 cut(s) 166
MvnI CGCG 2 cut(s) 1563, 1634
MwoI GCNNNNNNNGC 2 cut(s) 932, 1538
NdeII GATC 4 cut(s) 435, 718, 1021, 1621
NheI GCTAGC 1 cut(s) 655
NlaIII CATG 7 cut(s) 338, 599, 954, 1078, 1576, 1619, 1688
NlaIV GGNNCC 2 cut(s) 1153, 1661
NmuCI GTSAC 6 cut(s) 41, 47, 891, 1289, 1628, 1640
NsbI TGCGCA 1 cut(s) 936
NspI RCATGY 1 cut(s) 954
PagI TCATGA 1 cut(s) 1684
PaqCI CACCTGC 2 cut(s) 1546, 1730
PceI AGGCCT 2 cut(s) 793, 1321
PfeI GAWTC 5 cut(s) 429, 499, 521, 1384, 1697
Ple19I CGATCG 1 cut(s) 438
PleI GAGTC 3 cut(s) 25, 360, 641
PpsI GAGTC 3 cut(s) 25, 360, 641
Psp124BI GAGCTC 1 cut(s) 1559
Psp6I CCWGG 1 cut(s) 164
PspGI CCWGG 1 cut(s) 164
PspN4I GGNNCC 2 cut(s) 1153, 1661
PspPI GGNCC 2 cut(s) 253, 1659
PstI CTGCAG 2 cut(s) 198, 498
PstNI CAGNNNCTG 1 cut(s) 502
PvuI CGATCG 1 cut(s) 438
RsaI GTAC 4 cut(s) 190, 231, 667, 1681
RsaNI GTAC 4 cut(s) 189, 230, 666, 1680
SacI GAGCTC 1 cut(s) 1559
SaqAI TTAA 3 cut(s) 591, 1002, 1242
Sau3AI GATC 4 cut(s) 435, 718, 1021, 1621
Sau96I GGNCC 2 cut(s) 253, 1659
ScaI AGTACT 1 cut(s) 1681
SchI GAGTC 3 cut(s) 26, 361, 642
ScrFI CCNGG 1 cut(s) 166
SduI GDGCHC 3 cut(s) 141, 572, 1559
SfaNI GCATC 4 cut(s) 1026, 1080, 1398, 1519
SfcI CTRYAG 2 cut(s) 194, 494
SmlI CTYRAG 1 cut(s) 6
SmoI CTYRAG 1 cut(s) 6
SpeI ACTAGT 1 cut(s) 929
Sse9I AATT 5 cut(s) 94, 128, 818, 823, 905
SseBI AGGCCT 2 cut(s) 793, 1321
SsiI CCGC 5 cut(s) 677, 749, 1192, 1360, 1479
SspI AATATT 1 cut(s) 421
SspMI CTAG 6 cut(s) 71, 656, 803, 923, 930, 1497
SstI GAGCTC 1 cut(s) 1559
StuI AGGCCT 2 cut(s) 793, 1321
StyD4I CCNGG 1 cut(s) 164
TaaI ACNGT 7 cut(s) 47, 285, 897, 1052, 1145, 1525, 1596
TaiI ACGT 2 cut(s) 371, 1228
TaqI TCGA 4 cut(s) 33, 572, 1020, 1650
TaqII GACCGA 1 cut(s) 594
TasI AATT 5 cut(s) 94, 128, 818, 823, 905
TatI WGTACW 1 cut(s) 1679
TauI GCSGC 2 cut(s) 1362, 1481
TfiI GAWTC 5 cut(s) 429, 499, 521, 1384, 1697
Tru1I TTAA 3 cut(s) 591, 1002, 1242
Tru9I TTAA 3 cut(s) 591, 1002, 1242
TscAI CASTG 2 cut(s) 203, 288
TseFI GTSAC 6 cut(s) 41, 47, 891, 1289, 1628, 1640
TseI GCWGC 8 cut(s) 493, 625, 628, 659, 797, 916, 1189, 1610
Tsp45I GTSAC 6 cut(s) 41, 47, 891, 1289, 1628, 1640
TspDTI ATGAA 3 cut(s) 148, 361, 1710
TspGWI ACGGA 1 cut(s) 527
TspRI CASTG 2 cut(s) 203, 288
XapI RAATTY 1 cut(s) 128
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 1 cut(s) 954
XspI CTAG 6 cut(s) 71, 656, 803, 923, 930, 1497
ZrmI AGTACT 1 cut(s) 1681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.