Rroxscaffold_3G00230570

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000153
Physical Location & Seq
Forward (+)
15459430 .. 15461686
2257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00230570.1

Sequence Viewer

Length: 1350 bp
ATGGCTCAAGCATCCGAGTCTTCTCGGCCTATTGAACTTCGTGACTACCACTTCTCTTTAGAGGATGGTCTCATTCCTACTTCCACCGCGGGGGTTATGAAAGTACAACGGGAAGAGTTTAAAGAGGCCCTTGTTGGAGCCGGAGTGAAGATTTCACTGTTTATTTCTACCTTTTGTGAGGTTTACAAAGATGACATTTGCCTTCGCCATGTGGTGCGAAGATGGAGGTTTATTCGGATCGGTGGGACTAGGTTGTGTCCGAAAGCCAATAGTGAGAACAAGAGACTACTCCGCAGTAACACCGTCTTGGGTGTCATGTCTAGACTTAATTTTCCCTATACCGAGGTATATTCGAATGGCATGAAGTGTGTGGTTGGTCATCTCAAGGGTGGCAAAGGTGGAGGTGATTCCGAAGTAGAGTTGCCAGTGCTAGAATGGAGAAGGGTGGCAAGAGCGCTTCCGAGGGTAGAGGAGAAAGTAAAAGGAAAGTTTGCCGCTTCAAACCTAAGGTGGCAAAGGATCGCATCCCTCCTCCGAATCAAGAGTGCCTTTGGTGTCAAAGTGATACCGCCATCGAGTTTGGCTGGTGAAAAAGGGAAGAAGAGGAAAGTCGCTTCTACCTCGAGACCGCGTGGGGTTACTAAGAGAAAGGTTACGGATGATGCCTCACCCGCTGTCCTCGGGCGGAGCTCTCGCGTTGCTAACATGAGTTTTTCTAAACCTACACCGTCGTCTAAGGGCGCTACTCATGTTGATCTTAGTGACGCGCCAAGTGACGACATCGAAGGTAGCCCCCTTAGTGATAATGTCGGTTCACATGAGGAGAATGAATCGATACTTATGAGGGAGAGACATGCGATGACGAGGTTGAGTTGTTGCCTCGCAGGAGCTCAAGTCGCTATCTCGATGGAGAATCACGAGCATAATGTTAGTGGGATACGTGACCAAGGTGGTGGTGCTGGTGCTCTAATGAAGGAATCTGCTGTAAATGTCGGTCCTTATGTAGATAATCATAACAAGCGTGCGCGCAAAGACATTGGTATAAATGATTTGGTGAAAGAATCTGTCGACGATAGTCTTTGCAAGGATGACCATAATGAGCGGATACGTAGTGGTGGATCATTTTTGTTGACAGTTGGAGGGACATCATTTGAGCCCCATCTCCCCGAGACGACGCGGGGGGACGAAGGCGTTACCGCTGCAATCTTGGTCGGTATAGGGGTTCCGCCGTGCGTTGCCTCCGCTTGTTCTCTTGCACCTTGCTCGGATAAATCGAAAGGGTGTCAAAAGCTGATTTGGAGATGCGCTTTAGGAAGTTTATTGCTTACTTTGACAATGAGGATCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

449

Amino Acids

48.65

Weight (kDa)

9.36

Isoelectric Point (pI)

43.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1102
AccI GTMKAC 1 cut(s) 1068
AccII CGCG 6 cut(s) 89, 631, 696, 767, 1027, 1177
AclWI GGATC 4 cut(s) 245, 527, 1126, 1349
AfaI GTAC 1 cut(s) 105
AfeI AGCGCT 1 cut(s) 456
AfiI CCNNNNNNNGG 1 cut(s) 90
AgsI TTSAA 2 cut(s) 35, 501
AluBI AGCT 3 cut(s) 690, 890, 1291
AluI AGCT 3 cut(s) 690, 890, 1291
Alw21I GWGCWC 3 cut(s) 692, 892, 967
Alw26I GTCTC 5 cut(s) 74, 277, 619, 844, 1163
AlwI GGATC 4 cut(s) 245, 527, 1126, 1349
Ama87I CYCGRG 3 cut(s) 622, 680, 1166
Aor51HI AGCGCT 1 cut(s) 456
AoxI GGCC 2 cut(s) 26, 126
ApeKI GCWGC 1 cut(s) 1199
AspLEI GCGC 6 cut(s) 457, 743, 769, 1027, 1029, 1307
AspS9I GGNCC 2 cut(s) 127, 995
AsuHPI GGTGA 4 cut(s) 416, 599, 660, 1066
AsuII TTCGAA 1 cut(s) 353
AvaI CYCGRG 3 cut(s) 622, 680, 1166
AvaII GGWCC 1 cut(s) 995
AxyI CCTNAGG 1 cut(s) 506
BanII GRGCYC 3 cut(s) 692, 892, 1158
BauI CACGAG 1 cut(s) 917
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 3 cut(s) 692, 892, 967
BbvI GCAGC 1 cut(s) 1186
BccI CCATC 5 cut(s) 59, 216, 580, 901, 1167
BceAI ACGGC 1 cut(s) 1213
BcgI CGANNNNNNTGC 2 cut(s) 1245, 1279
BciVI GTATCC 2 cut(s) 930, 1098
BcoDI GTCTC 5 cut(s) 74, 277, 619, 844, 1163
BfaI CTAG 3 cut(s) 249, 321, 431
BfoI RGCGCY 2 cut(s) 458, 744
BfuI GTATCC 2 cut(s) 930, 1098
BisI GCNGC 2 cut(s) 495, 1200
BlsI GCNGC 2 cut(s) 496, 1201
Bme18I GGWCC 1 cut(s) 995
BmeT110I CYCGRG 3 cut(s) 622, 680, 1166
BmgT120I GGNCC 2 cut(s) 127, 995
BmiI GGNNCC 2 cut(s) 139, 1224
BmsI GCATC 4 cut(s) 20, 533, 652, 1292
BoxI GACNNNNGTC 1 cut(s) 1074
BpiI GAAGAC 1 cut(s) 12
Bpu14I TTCGAA 1 cut(s) 353
BpuEI CTTGAG 2 cut(s) 368, 876
Bsa29I ATCGAT 1 cut(s) 833
BsaAI YACGTR 2 cut(s) 941, 1109
BsaI GGTCTC 2 cut(s) 74, 619
BsaJI CCNNGG 5 cut(s) 87, 342, 461, 679, 946
BsaXI ACNNNNNCTCC 4 cut(s) 129, 159, 879, 909
Bsc4I CCNNNNNNNGG 1 cut(s) 90
Bse1I ACTGG 1 cut(s) 425
Bse21I CCTNAGG 1 cut(s) 506
BseCI ATCGAT 1 cut(s) 833
BseDI CCNNGG 5 cut(s) 87, 342, 461, 679, 946
BseGI GGATG 5 cut(s) 11, 70, 524, 664, 1093
BseLI CCNNNNNNNGG 1 cut(s) 90
BseNI ACTGG 1 cut(s) 425
BsePI GCGCGC 1 cut(s) 1025
BseRI GAGGAG 3 cut(s) 485, 521, 836
BseXI GCAGC 1 cut(s) 1186
Bsh1236I CGCG 6 cut(s) 89, 631, 696, 767, 1027, 1177
BshFI GGCC 2 cut(s) 28, 128
BshVI ATCGAT 1 cut(s) 833
BsiHKAI GWGCWC 3 cut(s) 692, 892, 967
BsiHKCI CYCGRG 3 cut(s) 622, 680, 1166
BsiSI CCGG 1 cut(s) 141
BslFI GGGAC 3 cut(s) 259, 1156, 1196
BslI CCNNNNNNNGG 1 cut(s) 90
BsmAI GTCTC 5 cut(s) 74, 277, 619, 844, 1163
BsmBI CGTCTC 1 cut(s) 1163
BsmFI GGGAC 3 cut(s) 259, 1156, 1196
BsnI GGCC 2 cut(s) 28, 128
Bso31I GGTCTC 2 cut(s) 74, 619
BsoBI CYCGRG 3 cut(s) 622, 680, 1166
Bsp119I TTCGAA 1 cut(s) 353
Bsp1286I GDGCHC 4 cut(s) 692, 892, 967, 1158
Bsp143I GATC 5 cut(s) 237, 519, 754, 1118, 1341
BspANI GGCC 2 cut(s) 28, 128
BspDI ATCGAT 1 cut(s) 833
BspFNI CGCG 6 cut(s) 89, 631, 696, 767, 1027, 1177
BspLI GGNNCC 2 cut(s) 139, 1224
BspPI GGATC 4 cut(s) 245, 527, 1126, 1349
BspT104I TTCGAA 1 cut(s) 353
BspTNI GGTCTC 2 cut(s) 74, 619
BsrBI CCGCTC 1 cut(s) 1102
BsrI ACTGG 1 cut(s) 425
BssECI CCNNGG 5 cut(s) 87, 342, 461, 679, 946
BssHII GCGCGC 1 cut(s) 1025
BssMI GATC 5 cut(s) 237, 519, 754, 1118, 1341
BssSI CACGAG 1 cut(s) 917
BssT1I CCWWGG 1 cut(s) 946
Bst2BI CACGAG 1 cut(s) 917
Bst4CI ACNGT 4 cut(s) 159, 304, 729, 1135
Bst6I CTCTTC 2 cut(s) 108, 596
BstBAI YACGTR 2 cut(s) 941, 1109
BstBI TTCGAA 1 cut(s) 353
BstC8I GCNNGC 2 cut(s) 1023, 1027
BstDEI CTNAG 5 cut(s) 506, 642, 735, 758, 797
BstDSI CCRYGG 1 cut(s) 87
BstF5I GGATG 5 cut(s) 11, 70, 524, 664, 1093
BstFNI CGCG 6 cut(s) 89, 631, 696, 767, 1027, 1177
BstH2I RGCGCY 2 cut(s) 458, 744
BstHHI GCGC 6 cut(s) 457, 743, 769, 1027, 1029, 1307
BstKTI GATC 5 cut(s) 240, 522, 757, 1121, 1344
BstMAI GTCTC 5 cut(s) 74, 277, 619, 844, 1163
BstMBI GATC 5 cut(s) 237, 519, 754, 1118, 1341
BstMWI GCNNNNNNNGC 2 cut(s) 671, 896
BstNSI RCATGY 1 cut(s) 857
BstPAI GACNNNNGTC 1 cut(s) 1074
BstSNI TACGTA 1 cut(s) 1109
BstUI CGCG 6 cut(s) 89, 631, 696, 767, 1027, 1177
BstV1I GCAGC 1 cut(s) 1186
BstV2I GAAGAC 1 cut(s) 12
BstXI CCANNNNNNTGG 1 cut(s) 953
Bsu15I ATCGAT 1 cut(s) 833
Bsu36I CCTNAGG 1 cut(s) 506
BsuI GTATCC 2 cut(s) 930, 1098
BsuRI GGCC 2 cut(s) 28, 128
BsuTUI ATCGAT 1 cut(s) 833
BtgI CCRYGG 1 cut(s) 87
BtgZI GCGATG 1 cut(s) 872
BtsCI GGATG 5 cut(s) 11, 70, 524, 664, 1093
BtsIMutI CAGTG 2 cut(s) 155, 432
Cac8I GCNNGC 2 cut(s) 1023, 1027
CfoI GCGC 6 cut(s) 457, 743, 769, 1027, 1029, 1307
Cfr13I GGNCC 2 cut(s) 127, 995
Cfr42I CCGCGG 1 cut(s) 90
ClaI ATCGAT 1 cut(s) 833
CseI GACGC 2 cut(s) 773, 1183
Csp6I GTAC 1 cut(s) 104
CviAII CATG 7 cut(s) 209, 316, 361, 706, 749, 818, 854
CviQI GTAC 1 cut(s) 104
DdeI CTNAG 5 cut(s) 506, 642, 735, 758, 797
DpnI GATC 5 cut(s) 239, 521, 756, 1120, 1343
DpnII GATC 5 cut(s) 237, 519, 754, 1118, 1341
DraI TTTAAA 1 cut(s) 121
Eam1104I CTCTTC 2 cut(s) 108, 596
EarI CTCTTC 2 cut(s) 108, 596
EciI GGCGGA 2 cut(s) 700, 1215
Ecl136II GAGCTC 2 cut(s) 690, 890
Eco105I TACGTA 1 cut(s) 1109
Eco130I CCWWGG 1 cut(s) 946
Eco24I GRGCYC 3 cut(s) 692, 892, 1158
Eco31I GGTCTC 2 cut(s) 74, 619
Eco47I GGWCC 1 cut(s) 995
Eco47III AGCGCT 1 cut(s) 456
Eco53kI GAGCTC 2 cut(s) 690, 890
Eco81I CCTNAGG 1 cut(s) 506
Eco88I CYCGRG 3 cut(s) 622, 680, 1166
EcoICRI GAGCTC 2 cut(s) 690, 890
EcoO109I RGGNCCY 1 cut(s) 127
EcoT14I CCWWGG 1 cut(s) 946
EcoT38I GRGCYC 3 cut(s) 692, 892, 1158
ErhI CCWWGG 1 cut(s) 946
Esp3I CGTCTC 1 cut(s) 1163
FaeI CATG 7 cut(s) 212, 319, 364, 709, 752, 821, 857
FalI AAGNNNNNCTT 4 cut(s) 114, 146, 533, 565
FaqI GGGAC 3 cut(s) 259, 1156, 1196
FatI CATG 7 cut(s) 208, 315, 360, 705, 748, 817, 853
FauI CCCGC 3 cut(s) 82, 679, 1170
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 2 cut(s) 495, 1200
FokI GGATG 4 cut(s) 77, 511, 671, 1100
FriOI GRGCYC 3 cut(s) 692, 892, 1158
Fsp4HI GCNGC 2 cut(s) 495, 1200
FspBI CTAG 3 cut(s) 249, 321, 431
GlaI GCGC 6 cut(s) 456, 742, 768, 1026, 1028, 1306
GluI GCNGC 2 cut(s) 495, 1200
HaeII RGCGCY 2 cut(s) 458, 744
HaeIII GGCC 2 cut(s) 28, 128
HapII CCGG 1 cut(s) 141
HgaI GACGC 2 cut(s) 773, 1183
HhaI GCGC 6 cut(s) 457, 743, 769, 1027, 1029, 1307
Hin1II CATG 7 cut(s) 212, 319, 364, 709, 752, 821, 857
Hin6I GCGC 6 cut(s) 455, 741, 767, 1025, 1027, 1305
HinP1I GCGC 6 cut(s) 455, 741, 767, 1025, 1027, 1305
HincII GTYRAC 2 cut(s) 1069, 1131
HindII GTYRAC 2 cut(s) 1069, 1131
HinfI GANTC 7 cut(s) 17, 407, 537, 830, 913, 977, 1061
HpaII CCGG 1 cut(s) 141
HphI GGTGA 4 cut(s) 416, 599, 660, 1066
Hpy166II GTNNAC 4 cut(s) 184, 815, 1069, 1131
Hpy188I TCNGA 7 cut(s) 16, 237, 261, 412, 462, 536, 1267
Hpy188III TCNNGA 6 cut(s) 41, 321, 541, 624, 904, 917
Hpy8I GTNNAC 4 cut(s) 184, 815, 1069, 1131
Hpy99I CGWCG 3 cut(s) 733, 1073, 1177
HpyAV CCTTC 5 cut(s) 212, 435, 779, 967, 1181
HpyCH4III ACNGT 4 cut(s) 159, 304, 729, 1135
HpyCH4IV ACGT 2 cut(s) 940, 1108
HpyCH4V TGCA 3 cut(s) 1083, 1202, 1256
HpyF10VI GCNNNNNNNGC 2 cut(s) 671, 896
HpyF3I CTNAG 5 cut(s) 506, 642, 735, 758, 797
HpySE526I ACGT 2 cut(s) 940, 1108
Hsp92II CATG 7 cut(s) 212, 319, 364, 709, 752, 821, 857
HspAI GCGC 6 cut(s) 455, 741, 767, 1025, 1027, 1305
KspI CCGCGG 1 cut(s) 90
Kzo9I GATC 5 cut(s) 237, 519, 754, 1118, 1341
LmnI GCTCC 3 cut(s) 137, 687, 887
LpnPI CCDG 5 cut(s) 154, 438, 570, 870, 945
Lsp1109I GCAGC 1 cut(s) 1186
LweI GCATC 4 cut(s) 20, 533, 652, 1292
MaeI CTAG 3 cut(s) 249, 321, 431
MaeII ACGT 2 cut(s) 940, 1108
MaeIII GTNAC 8 cut(s) 41, 296, 637, 652, 761, 773, 941, 1192
MalI GATC 5 cut(s) 239, 521, 756, 1120, 1343
MbiI CCGCTC 1 cut(s) 1102
MboI GATC 5 cut(s) 237, 519, 754, 1118, 1341
MboII GAAGA 6 cut(s) 12, 125, 160, 231, 610, 613
MhlI GDGCHC 4 cut(s) 692, 892, 967, 1158
MluCI AATT 1 cut(s) 328
MlyI GAGTC 1 cut(s) 26
MmeI TCCRAC 2 cut(s) 115, 1117
MseI TTAA 2 cut(s) 120, 327
MspA1I CMGCKG 3 cut(s) 89, 674, 1199
MspI CCGG 1 cut(s) 141
MvnI CGCG 6 cut(s) 89, 631, 696, 767, 1027, 1177
MwoI GCNNNNNNNGC 2 cut(s) 671, 896
NdeII GATC 5 cut(s) 237, 519, 754, 1118, 1341
NlaIII CATG 7 cut(s) 212, 319, 364, 709, 752, 821, 857
NlaIV GGNNCC 2 cut(s) 139, 1224
NmeAIII GCCGAG 1 cut(s) 4
NmuCI GTSAC 4 cut(s) 41, 761, 773, 941
NspI RCATGY 1 cut(s) 857
NspV TTCGAA 1 cut(s) 353
PaeR7I CTCGAG 1 cut(s) 622
PauI GCGCGC 1 cut(s) 1025
PcsI WCGNNNNNNNCGW 1 cut(s) 1271
PfeI GAWTC 6 cut(s) 407, 537, 830, 913, 977, 1061
PkrI GCNGC 2 cut(s) 496, 1201
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
Ppu21I YACGTR 2 cut(s) 941, 1109
PshAI GACNNNNGTC 1 cut(s) 1074
Psp124BI GAGCTC 2 cut(s) 692, 892
PspN4I GGNNCC 2 cut(s) 139, 1224
PspPI GGNCC 2 cut(s) 127, 995
PteI GCGCGC 1 cut(s) 1025
RsaI GTAC 1 cut(s) 105
RsaNI GTAC 1 cut(s) 104
SacI GAGCTC 2 cut(s) 692, 892
SacII CCGCGG 1 cut(s) 90
SalI GTCGAC 1 cut(s) 1067
SaqAI TTAA 2 cut(s) 120, 327
SatI GCNGC 2 cut(s) 495, 1200
Sau3AI GATC 5 cut(s) 237, 519, 754, 1118, 1341
Sau96I GGNCC 2 cut(s) 127, 995
SchI GAGTC 1 cut(s) 26
SduI GDGCHC 4 cut(s) 692, 892, 967, 1158
SfaNI GCATC 4 cut(s) 20, 533, 652, 1292
Sfr274I CTCGAG 1 cut(s) 622
Sfr303I CCGCGG 1 cut(s) 90
SfuI TTCGAA 1 cut(s) 353
SgrBI CCGCGG 1 cut(s) 90
SinI GGWCC 1 cut(s) 995
SlaI CTCGAG 1 cut(s) 622
SmlI CTYRAG 4 cut(s) 6, 383, 622, 891
SmoI CTYRAG 4 cut(s) 6, 383, 622, 891
SnaBI TACGTA 1 cut(s) 1109
Sse9I AATT 1 cut(s) 328
SspMI CTAG 3 cut(s) 249, 321, 431
SstI GAGCTC 2 cut(s) 692, 892
StyI CCWWGG 1 cut(s) 946
TaaI ACNGT 4 cut(s) 159, 304, 729, 1135
TaiI ACGT 2 cut(s) 943, 1111
TaqI TCGA 8 cut(s) 353, 575, 623, 783, 833, 905, 1068, 1274
TaqII GACCGA 1 cut(s) 983
TasI AATT 1 cut(s) 328
TatI WGTACW 1 cut(s) 103
TauI GCSGC 1 cut(s) 497
TfiI GAWTC 6 cut(s) 407, 537, 830, 913, 977, 1061
Tru1I TTAA 2 cut(s) 120, 327
Tru9I TTAA 2 cut(s) 120, 327
TscAI CASTG 2 cut(s) 162, 432
TseFI GTSAC 4 cut(s) 41, 761, 773, 941
TseI GCWGC 1 cut(s) 1199
Tsp45I GTSAC 4 cut(s) 41, 761, 773, 941
TspDTI ATGAA 4 cut(s) 113, 377, 843, 986
TspGWI ACGGA 1 cut(s) 671
TspRI CASTG 2 cut(s) 162, 432
VpaK11BI GGWCC 1 cut(s) 995
XbaI TCTAGA 1 cut(s) 320
XceI RCATGY 1 cut(s) 857
XcmI CCANNNNNNNNNTGG 1 cut(s) 432
XhoI CTCGAG 1 cut(s) 622
XmiI GTMKAC 1 cut(s) 1068
XspI CTAG 3 cut(s) 249, 321, 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.