Rorug07G0344800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000153
Physical Location & Seq
Reverse (-)
38255696 .. 38262551
6856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0344800.1

Sequence Viewer

Length: 1197 bp
ATGGAGATAAAGGAAAACGGAGAAGAAGAGCAGCAGATTGTGAATCCTTGGAAGGTGGAGGCCAAAGAAGGCGGCAAAATTGACTATGATAAGCTCATAGATCAGTTCGGTTGCCAGAGGGTCGATCAGTCTCTTGTCGACCGTGTCCGCCGTCTCACCTCACGTACCCCGCACGTTTTCCTCCGTCGTGACGTCTTCTTCGCTCACCGGGACTTTAATGAGATTCTGGATGCTTATGAGAGAGGAGAGAAGTTCTATTTGTACACAGGAAGAGGGCCTTCTTCTGAGGCTTTGCATTTGGGGCATCTCATCCCCTTCATGTTCACCAAATATTTGCAAGATGCCTTCAAGGTCCCTCTCGTTATACAACTTACCGACGACGAGAAATGTATTTGGAAAAATCTCACAGTTGAAGAAAGCCAGAGACTTGCAAGGGAAAATGCTAAAGACATCATTGCTTGTGGTTTTGACGTAACAAGAACCTTTATCTTCTCTGATTTTGATTATGTTGGTGGTGCCTTCTACAAGAACATGGTTAAGGTCGGAAAGTGTGTCACTTATAATAAGGTTGTTGGCATATTTGGTTTCACTGGTGAAGATCATATAGGAAAAGTTAGTTTTCCTCCTGTACAGGCGGTACCATCATTTCCAAGTTCATTTCCACATCTCTTCTCTGGCCAAGATAATCTTCGTTGTTTAATACCCTGTGCAATTGACCAGGATCCTTATTTTAGAATGACCCGAGATGTTGCTCCACGCATTGGATATCACAAACCTGCTTTAATCGAGTCTCTATTCTTCCCTGCCCTACAGGGAGAAACAGGAAAAATGTCGGCTAGTGATCCCAATTCTGCCATCTATGTAACTGATTCTGCAAAGGATATTAAGAGCAAGATAAACAAGTTTGCATTTTCAGGGGGACAAGATACAATAGAGAAACACAGAGAGTTGGGAGCAAATCTCGAGGTAGACATTCCATATAAATATCTGAGATTTTTTCTGGATGATGACATCGAGCTTGCTTATATAGGAAAGGAGTATGGTGCAGGTCGAATGTTGACAGGGGAAGTGAAGCAGAGGCTCATTCAAGTTTTGACAGAAATTGTGGAGAGACATCGTAGGGCTAGAGCTGCTGTCACCGATGAGATGGTGGACGCATTTATGGCAGTGAGGCCCCTCCCAAACATGTTCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

398

Amino Acids

45.5

Weight (kDa)

6.05

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1b PF00579 82 - 368 1.9e-19 tRNA synthetases class I (W and Y)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 561
AatII GACGTC 1 cut(s) 195
Acc36I ACCTGC 2 cut(s) 784, 1037
Acc65I GGTACC 1 cut(s) 637
AccB1I GGYRCC 2 cut(s) 515, 637
AccB7I CCANNNNNTGG 1 cut(s) 761
AccI GTMKAC 2 cut(s) 138, 969
AciI CCGC 4 cut(s) 72, 148, 170, 635
AclWI GGATC 3 cut(s) 716, 729, 836
AcoI YGGCCR 1 cut(s) 676
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 4 cut(s) 166, 263, 630, 639
AfiI CCNNNNNNNGG 1 cut(s) 761
AflIII ACRYGT 1 cut(s) 1185
AgsI TTSAA 4 cut(s) 349, 413, 1088, 1192
AjnI CCWGG 1 cut(s) 717
AjuI GAANNNNNNNTTGG 2 cut(s) 672, 704
AluBI AGCT 3 cut(s) 94, 1018, 1130
AluI AGCT 3 cut(s) 94, 1018, 1130
Alw26I GTCTC 5 cut(s) 135, 158, 418, 795, 1105
AlwI GGATC 3 cut(s) 716, 729, 836
Ama87I CYCGRG 2 cut(s) 741, 962
AoxI GGCC 4 cut(s) 60, 275, 676, 1172
ApeKI GCWGC 2 cut(s) 31, 1130
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
Asp718I GGTACC 1 cut(s) 637
AspS9I GGNCC 3 cut(s) 275, 352, 1173
AsuC2I CCSGG 1 cut(s) 209
AsuHPI GGTGA 5 cut(s) 148, 197, 316, 605, 1129
AvaI CYCGRG 2 cut(s) 741, 962
AvaII GGWCC 1 cut(s) 352
BalI TGGCCA 1 cut(s) 678
BamHI GGATCC 1 cut(s) 721
BanI GGYRCC 2 cut(s) 515, 637
BbsI GAAGAC 1 cut(s) 187
BbvI GCAGC 2 cut(s) 43, 1117
BccI CCATC 3 cut(s) 649, 863, 1141
BceAI ACGGC 1 cut(s) 135
BciT130I CCWGG 1 cut(s) 719
BcnI CCSGG 1 cut(s) 209
BcoDI GTCTC 5 cut(s) 135, 158, 418, 795, 1105
BfaI CTAG 2 cut(s) 837, 1125
BfmI CTRYAG 1 cut(s) 809
BfuAI ACCTGC 2 cut(s) 784, 1037
BisI GCNGC 3 cut(s) 32, 73, 1131
BlsI GCNGC 3 cut(s) 33, 74, 1132
Bme1390I CCNGG 2 cut(s) 209, 719
Bme18I GGWCC 1 cut(s) 352
BmeT110I CYCGRG 2 cut(s) 741, 962
BmgT120I GGNCC 3 cut(s) 275, 352, 1173
BmiI GGNNCC 5 cut(s) 354, 517, 639, 723, 1175
BmrFI CCNGG 2 cut(s) 209, 719
BmsI GCATC 3 cut(s) 220, 313, 331
BpiI GAAGAC 1 cut(s) 187
BplI GAGNNNNNCTC 2 cut(s) 945, 977
BpuMI CCSGG 1 cut(s) 209
BsaAI YACGTR 1 cut(s) 164
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 1 cut(s) 47
Bsc4I CCNNNNNNNGG 1 cut(s) 761
Bse1I ACTGG 1 cut(s) 595
Bse3DI GCAATG 1 cut(s) 453
BseBI CCWGG 1 cut(s) 719
BseDI CCNNGG 1 cut(s) 47
BseGI GGATG 3 cut(s) 235, 309, 1009
BseLI CCNNNNNNNGG 1 cut(s) 761
BseMI GCAATG 1 cut(s) 453
BseMII CTCAG 2 cut(s) 276, 980
BseNI ACTGG 1 cut(s) 595
BseRI GAGGAG 1 cut(s) 258
BseXI GCAGC 2 cut(s) 43, 1117
BsgI GTGCAG 1 cut(s) 1065
Bsh1285I CGRYCG 1 cut(s) 142
BshFI GGCC 4 cut(s) 62, 277, 678, 1174
BshNI GGYRCC 2 cut(s) 515, 637
BsiEI CGRYCG 1 cut(s) 142
BsiHKCI CYCGRG 2 cut(s) 741, 962
BsiSI CCGG 1 cut(s) 208
BslFI GGGAC 3 cut(s) 224, 338, 933
BslI CCNNNNNNNGG 1 cut(s) 761
BsmAI GTCTC 5 cut(s) 135, 158, 418, 795, 1105
BsmBI CGTCTC 1 cut(s) 158
BsmFI GGGAC 3 cut(s) 224, 338, 933
BsnI GGCC 4 cut(s) 62, 277, 678, 1174
BsoBI CYCGRG 2 cut(s) 741, 962
Bsp1407I TGTACA 2 cut(s) 261, 628
Bsp143I GATC 5 cut(s) 100, 124, 598, 721, 841
BspACI CCGC 4 cut(s) 72, 148, 170, 635
BspANI GGCC 4 cut(s) 62, 277, 678, 1174
BspCNI CTCAG 2 cut(s) 277, 981
BspLI GGNNCC 5 cut(s) 354, 517, 639, 723, 1175
BspMI ACCTGC 2 cut(s) 784, 1037
BspPI GGATC 3 cut(s) 716, 729, 836
BspQI GCTCTTC 1 cut(s) 21
BspT107I GGYRCC 2 cut(s) 515, 637
BsrDI GCAATG 1 cut(s) 453
BsrGI TGTACA 2 cut(s) 261, 628
BsrI ACTGG 1 cut(s) 595
BssECI CCNNGG 1 cut(s) 47
BssMI GATC 5 cut(s) 100, 124, 598, 721, 841
BssNI GRCGYC 1 cut(s) 192
BssT1I CCWWGG 1 cut(s) 47
Bst2UI CCWGG 1 cut(s) 719
Bst4CI ACNGT 2 cut(s) 143, 409
Bst6I CTCTTC 3 cut(s) 21, 265, 674
BstACI GRCGYC 1 cut(s) 192
BstAUI TGTACA 2 cut(s) 261, 628
BstBAI YACGTR 1 cut(s) 164
BstC8I GCNNGC 1 cut(s) 1020
BstDEI CTNAG 2 cut(s) 285, 989
BstF5I GGATG 3 cut(s) 235, 309, 1009
BstKTI GATC 5 cut(s) 103, 127, 601, 724, 844
BstMAI GTCTC 5 cut(s) 135, 158, 418, 795, 1105
BstMBI GATC 5 cut(s) 100, 124, 598, 721, 841
BstMCI CGRYCG 1 cut(s) 142
BstMWI GCNNNNNNNGC 3 cut(s) 301, 1130, 1163
BstNI CCWGG 1 cut(s) 719
BstNSI RCATGY 1 cut(s) 1189
BstSCI CCNGG 2 cut(s) 207, 717
BstSFI CTRYAG 1 cut(s) 809
BstV1I GCAGC 2 cut(s) 43, 1117
BstV2I GAAGAC 1 cut(s) 187
BstX2I RGATCY 1 cut(s) 721
BstYI RGATCY 1 cut(s) 721
BsuRI GGCC 4 cut(s) 62, 277, 678, 1174
BtsCI GGATG 3 cut(s) 235, 309, 1009
BtsI GCAGTG 1 cut(s) 1173
BtsIMutI CAGTG 2 cut(s) 588, 1173
BveI ACCTGC 2 cut(s) 784, 1037
Cac8I GCNNGC 1 cut(s) 1020
Cfr13I GGNCC 3 cut(s) 275, 352, 1173
CseI GACGC 1 cut(s) 1163
Csp6I GTAC 4 cut(s) 165, 262, 629, 638
CviAII CATG 3 cut(s) 319, 532, 1186
CviQI GTAC 4 cut(s) 165, 262, 629, 638
DdeI CTNAG 2 cut(s) 285, 989
DpnI GATC 5 cut(s) 102, 126, 600, 723, 843
DpnII GATC 5 cut(s) 100, 124, 598, 721, 841
EaeI YGGCCR 1 cut(s) 676
Eam1104I CTCTTC 3 cut(s) 21, 265, 674
EarI CTCTTC 3 cut(s) 21, 265, 674
EciI GGCGGA 1 cut(s) 137
Eco130I CCWWGG 1 cut(s) 47
Eco32I GATATC 1 cut(s) 767
Eco47I GGWCC 1 cut(s) 352
Eco88I CYCGRG 2 cut(s) 741, 962
EcoO109I RGGNCCY 3 cut(s) 275, 352, 1173
EcoRII CCWGG 1 cut(s) 717
EcoRV GATATC 1 cut(s) 767
EcoT14I CCWWGG 1 cut(s) 47
ErhI CCWWGG 1 cut(s) 47
Esp3I CGTCTC 1 cut(s) 158
FaeI CATG 3 cut(s) 322, 535, 1189
FalI AAGNNNNNCTT 4 cut(s) 262, 294, 672, 704
FaqI GGGAC 3 cut(s) 224, 338, 933
FatI CATG 3 cut(s) 318, 531, 1185
FauI CCCGC 1 cut(s) 177
FblI GTMKAC 2 cut(s) 138, 969
Fnu4HI GCNGC 3 cut(s) 32, 73, 1131
FokI GGATG 3 cut(s) 242, 296, 1016
Fsp4HI GCNGC 3 cut(s) 32, 73, 1131
FspBI CTAG 2 cut(s) 837, 1125
GluI GCNGC 3 cut(s) 32, 73, 1131
HaeIII GGCC 4 cut(s) 62, 277, 678, 1174
HapII CCGG 1 cut(s) 208
HgaI GACGC 1 cut(s) 1163
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 3 cut(s) 322, 535, 1189
HincII GTYRAC 2 cut(s) 139, 1059
HindII GTYRAC 2 cut(s) 139, 1059
HinfI GANTC 4 cut(s) 43, 223, 788, 869
HpaII CCGG 1 cut(s) 208
HphI GGTGA 5 cut(s) 148, 197, 316, 605, 1129
Hpy166II GTNNAC 6 cut(s) 139, 264, 324, 970, 1059, 1153
Hpy188I TCNGA 4 cut(s) 286, 496, 545, 990
Hpy188III TCNNGA 4 cut(s) 188, 227, 962, 1001
Hpy8I GTNNAC 6 cut(s) 139, 264, 324, 970, 1059, 1153
Hpy99I CGWCG 3 cut(s) 189, 380, 383
HpyAV CCTTC 6 cut(s) 46, 62, 288, 325, 355, 529
HpyCH4III ACNGT 2 cut(s) 143, 409
HpyCH4IV ACGT 4 cut(s) 163, 174, 192, 471
HpyCH4V TGCA 7 cut(s) 295, 337, 431, 710, 875, 908, 1046
HpyF10VI GCNNNNNNNGC 3 cut(s) 301, 1130, 1163
HpyF3I CTNAG 2 cut(s) 285, 989
HpySE526I ACGT 4 cut(s) 163, 174, 192, 471
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 3 cut(s) 322, 535, 1189
KpnI GGTACC 1 cut(s) 641
Kzo9I GATC 5 cut(s) 100, 124, 598, 721, 841
LguI GCTCTTC 1 cut(s) 21
LmnI GCTCC 2 cut(s) 757, 953
Lsp1109I GCAGC 2 cut(s) 43, 1117
LweI GCATC 3 cut(s) 220, 313, 331
MaeI CTAG 2 cut(s) 837, 1125
MaeII ACGT 4 cut(s) 163, 174, 192, 471
MaeIII GTNAC 5 cut(s) 188, 472, 553, 862, 1135
MalI GATC 5 cut(s) 102, 126, 600, 723, 843
MboI GATC 5 cut(s) 100, 124, 598, 721, 841
MfeI CAATTG 1 cut(s) 711
MflI RGATCY 1 cut(s) 721
MlsI TGGCCA 1 cut(s) 678
MluCI AATT 4 cut(s) 78, 711, 847, 1101
MluNI TGGCCA 1 cut(s) 678
MlyI GAGTC 1 cut(s) 797
MmeI TCCRAC 1 cut(s) 523
Mox20I TGGCCA 1 cut(s) 678
MscI TGGCCA 1 cut(s) 678
MseI TTAA 5 cut(s) 216, 537, 698, 782, 885
Msp20I TGGCCA 1 cut(s) 678
MspI CCGG 1 cut(s) 208
MspR9I CCNGG 2 cut(s) 209, 719
MunI CAATTG 1 cut(s) 711
MvaI CCWGG 1 cut(s) 719
MwoI GCNNNNNNNGC 3 cut(s) 301, 1130, 1163
NciI CCSGG 1 cut(s) 209
NdeII GATC 5 cut(s) 100, 124, 598, 721, 841
NlaIII CATG 3 cut(s) 322, 535, 1189
NlaIV GGNNCC 5 cut(s) 354, 517, 639, 723, 1175
NmuCI GTSAC 3 cut(s) 188, 553, 1135
NspI RCATGY 1 cut(s) 1189
PaeR7I CTCGAG 1 cut(s) 962
PciI ACATGT 1 cut(s) 1185
PciSI GCTCTTC 1 cut(s) 21
PfeI GAWTC 3 cut(s) 43, 223, 869
PflFI GACNNNGTC 1 cut(s) 143
PflMI CCANNNNNTGG 1 cut(s) 761
PkrI GCNGC 3 cut(s) 33, 74, 1132
PleI GAGTC 1 cut(s) 796
PpsI GAGTC 1 cut(s) 796
Ppu21I YACGTR 1 cut(s) 164
PpuMI RGGWCCY 1 cut(s) 352
PscI ACATGT 1 cut(s) 1185
PsiI TTATAA 1 cut(s) 561
Psp5II RGGWCCY 1 cut(s) 352
Psp6I CCWGG 1 cut(s) 717
PspGI CCWGG 1 cut(s) 717
PspN4I GGNNCC 5 cut(s) 354, 517, 639, 723, 1175
PspPI GGNCC 3 cut(s) 275, 352, 1173
PspPPI RGGWCCY 1 cut(s) 352
PsuI RGATCY 1 cut(s) 721
PsyI GACNNNGTC 1 cut(s) 143
RsaI GTAC 4 cut(s) 166, 263, 630, 639
RsaNI GTAC 4 cut(s) 165, 262, 629, 638
SalI GTCGAC 1 cut(s) 137
SapI GCTCTTC 1 cut(s) 21
SaqAI TTAA 5 cut(s) 216, 537, 698, 782, 885
SatI GCNGC 3 cut(s) 32, 73, 1131
Sau3AI GATC 5 cut(s) 100, 124, 598, 721, 841
Sau96I GGNCC 3 cut(s) 275, 352, 1173
SchI GAGTC 1 cut(s) 797
ScrFI CCNGG 2 cut(s) 209, 719
SfaNI GCATC 3 cut(s) 220, 313, 331
SfcI CTRYAG 1 cut(s) 809
Sfr274I CTCGAG 1 cut(s) 962
SinI GGWCC 1 cut(s) 352
SlaI CTCGAG 1 cut(s) 962
SmlI CTYRAG 1 cut(s) 962
SmoI CTYRAG 1 cut(s) 962
Sse9I AATT 4 cut(s) 78, 711, 847, 1101
SsiI CCGC 4 cut(s) 72, 148, 170, 635
SspI AATATT 1 cut(s) 332
SspMI CTAG 2 cut(s) 837, 1125
StyD4I CCNGG 2 cut(s) 207, 717
StyI CCWWGG 1 cut(s) 47
TaaI ACNGT 2 cut(s) 143, 409
TaiI ACGT 4 cut(s) 166, 177, 195, 474
TaqI TCGA 6 cut(s) 123, 138, 786, 963, 1014, 1051
TasI AATT 4 cut(s) 78, 711, 847, 1101
TatI WGTACW 2 cut(s) 261, 628
TauI GCSGC 1 cut(s) 75
TfiI GAWTC 3 cut(s) 43, 223, 869
Tru1I TTAA 5 cut(s) 216, 537, 698, 782, 885
Tru9I TTAA 5 cut(s) 216, 537, 698, 782, 885
TscAI CASTG 2 cut(s) 595, 1173
TseFI GTSAC 3 cut(s) 188, 553, 1135
TseI GCWGC 2 cut(s) 31, 1130
Tsp45I GTSAC 3 cut(s) 188, 553, 1135
TspDTI ATGAA 2 cut(s) 307, 645
TspGWI ACGGA 2 cut(s) 33, 173
TspRI CASTG 2 cut(s) 595, 1173
Tth111I GACNNNGTC 1 cut(s) 143
Van91I CCANNNNNTGG 1 cut(s) 761
VpaK11BI GGWCC 1 cut(s) 352
XceI RCATGY 1 cut(s) 1189
XhoI CTCGAG 1 cut(s) 962
XmiI GTMKAC 2 cut(s) 138, 969
XspI CTAG 2 cut(s) 837, 1125
ZraI GACGTC 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.