Rmu_sc0004283.1_g000041

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004283.1
OG0000153
Physical Location & Seq
Reverse (-)
165550 .. 168913
3364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004283.1_g000041.1.cds

Sequence Viewer

Length: 2388 bp
atgcatatattattggggcgggtttggggatggggatcacaataccatccccgccccatccccaatccccatttgtccccgaattctccccccattaggggcgggttcattttcacagatttttcctatgagaatgtgcagccgcgagtcttcccgttggccattatgctagcaaccgtatctagttttttccttcaagtatttgtatgggagagattcgaaggtttggctgtggaacccgtaactcctgagtccctccaccaccttgagggaggtaaaagggacttcaatctagtaggattcccattgtgttgtagatggttcagaaggaaggccaagaacggtgcatttaggcctgttgttttggatggcattgggaaattcaatttcagaccatatttcgctgctcatggcttccagacatttcctttcttttacccagagggtaactcatcaccgttcctagagccggttgagctgcttttaaccactagtacgcagtccttaatagcatgtggtgatttctttgaccccgtgatggagaagtactctcctcatagagttaagaggcaatttggcattgaccaggatgtgccatcgcatctatcctatggtggacatcttggggattgcatcatgggtttcactcggacatatggtatttcctgcaggggtatgctctctgatagtctcgggaagaaaggctgtgttggatcccctacatccacattcttgaggttttgggagttgcagctgtgcgagtttaggaggtttattcaaactggtgggactaggttgcgtccgaaagccactagtgagaacaagagactactccacagtagcactgtcatgggtgtcatgtctagacttaaccttccctatactgaggtatactcgaatggtataaagcgtgtggttggtcacctcaagggtggtaaaagtggagatgatcctgaagtagagttgccagctgccggagtggagaaaggtagcaagagcactacaaagggtaaagtcagggcttccgaggatggaggggaaggcagaaggaaggttcgtcgcttcaaacctaaggtagccaaagatcgtatccctcctccagtagtcaagagtgcctttggtgttaaagtgatactgccatcgagtttggcttgtgaaaaagggaaaaagaggaaagctgcttctaccctgagaccaagtggggttattaagaggaaggttgcagatgaagcctcacctgtcgtccttaggcggagttctcgtgtggccaacatgaatttttgtaaacgtaagccgtcgtccaagggtgatgtttatgttgatcttagtgatgggccaagtgtcgacggggatagtagccccctgagtgatgaggagaatgagtctgatacttatgagggaaagacctgcgatggtggtagccaggtggagtcttttgaagatgaggatggtcaggggagttgtatatgcttgagaattttgggtgaggatacttacttcttcgcatgttgcacctcgttatatgaccttggcgtagctggtgctctaatgcaggaatctgctgcaaatgttggcccttgtgtatctgattgtaatatgcaggacattggcattagtgatttggcgaaagaatctactgcggacgatagtctttgtgaggatgaccataatgagcggggcggatcagatttgttaggggttggagggacattgtttgagccccacctccctgagacagcaccgggggacaaccacgtcactgcgacaatcttggtcagcagaggaactccactttgtgcttcctcttctcgctctcttgctcctaactcagataaatcgggaagtgtgtcgagggctgatttggagatgcgttttagaaagtttcttgcttgttttgacactgaggatcgcttaagtattactattgatgacattgcgcgcccattgagtggtatcagatcttcatttgagggtgggaaagtcccctcggagttcgtggctccacttgctaaatttgctgaaagcatggagactgaagaagtgaaaaatgaggaaacttttttaatttggagggatgcatgccgtgacatcatagattgggggcttaaggtcgacttcatgcttgattatttgaagcaggctgctaaggatttctttggttttatgctcagacccaatggatcagaaagtagttgcagggagatcattcaaatggaggaagccgtatccaagttgagggaaaagctttcgcatcttgaacaacaattaggaaaggcgcgagaagacctatgcaccaagcttggtgatgacattagcttagatagcaagtcctgcatattaagatcttcgtgggttgctcagagccgtgcaactcatggcttgtattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

795

Amino Acids

87.68

Weight (kDa)

6.78

Isoelectric Point (pI)

52.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1754
Acc36I ACCTGC 1 cut(s) 1415
AccB7I CCANNNNNTGG 1 cut(s) 1949
AccBSI CCGCTC 1 cut(s) 1675
AccI GTMKAC 3 cut(s) 891, 1344, 2112
AccII CGCG 3 cut(s) 145, 1939, 2278
AciI CCGC 8 cut(s) 19, 52, 102, 143, 1252, 1640, 1675, 1680
AclWI GGATC 7 cut(s) 43, 708, 721, 944, 1690, 1914, 2188
AcoI YGGCCR 2 cut(s) 159, 1266
AcsI RAATTY 5 cut(s) 82, 380, 1276, 1476, 2012
AcuI CTGAAG 2 cut(s) 975, 2055
AdeI CACNNNGTG 1 cut(s) 1796
AfaI GTAC 2 cut(s) 496, 548
AfiI CCNNNNNNNGG 9 cut(s) 96, 97, 98, 268, 469, 538, 974, 1949, 2235
AflII CTTAAG 2 cut(s) 1912, 2105
AgsI TTSAA 9 cut(s) 197, 289, 385, 779, 1066, 1439, 2134, 2210, 2258
AhlI ACTAGT 2 cut(s) 491, 812
AjiI CACGTC 1 cut(s) 1756
AjnI CCWGG 2 cut(s) 585, 1422
AluBI AGCT 8 cut(s) 478, 754, 971, 1178, 1538, 2245, 2299, 2316
AluI AGCT 8 cut(s) 478, 754, 971, 1178, 1538, 2245, 2299, 2316
Alw21I GWGCWC 2 cut(s) 1001, 1546
Alw26I GTCTC 5 cut(s) 695, 820, 1186, 1727, 2024
AlwI GGATC 7 cut(s) 43, 708, 721, 944, 1690, 1914, 2188
Ama87I CYCGRG 1 cut(s) 692
AoxI GGCC 6 cut(s) 159, 333, 353, 1266, 1334, 1573
ApeKI GCWGC 8 cut(s) 139, 404, 478, 751, 971, 1178, 1562, 2141
ApoI RAATTY 5 cut(s) 82, 380, 1276, 1476, 2012
AspLEI GCGC 3 cut(s) 1939, 1941, 2278
AspS9I GGNCC 2 cut(s) 1334, 1574
AsuC2I CCSGG 1 cut(s) 1743
AsuHPI GGTGA 7 cut(s) 447, 530, 914, 1227, 1319, 1496, 2315
AsuII TTCGAA 1 cut(s) 219
AsuNHI GCTAGC 1 cut(s) 169
AvaI CYCGRG 1 cut(s) 692
AxyI CCTNAGG 2 cut(s) 1071, 1247
BalI TGGCCA 2 cut(s) 161, 1268
BamHI GGATCC 1 cut(s) 713
BanII GRGCYC 1 cut(s) 1722
BarI GAAGNNNNNNTAC 2 cut(s) 1945, 1977
BauI CACGAG 1 cut(s) 1260
BbsI GAAGAC 2 cut(s) 142, 2289
Bbv12I GWGCWC 2 cut(s) 1001, 1546
BbvI GCAGC 8 cut(s) 151, 391, 465, 763, 958, 1165, 1549, 2128
BceAI ACGGC 4 cut(s) 1279, 2067, 2207, 2349
BciT130I CCWGG 2 cut(s) 587, 1424
BciVI GTATCC 3 cut(s) 1100, 1483, 2236
BcnI CCSGG 1 cut(s) 1743
BcoDI GTCTC 5 cut(s) 695, 820, 1186, 1727, 2024
BcuI ACTAGT 2 cut(s) 491, 812
BfaI CTAG 8 cut(s) 170, 183, 293, 464, 492, 792, 813, 864
BfmI CTRYAG 1 cut(s) 667
BfrI CTTAAG 2 cut(s) 1912, 2105
BfuAI ACCTGC 1 cut(s) 1415
BfuI GTATCC 3 cut(s) 1100, 1483, 2236
BglII AGATCT 2 cut(s) 1958, 2342
BisI GCNGC 9 cut(s) 140, 143, 405, 479, 752, 972, 1179, 1563, 2142
BlsI GCNGC 9 cut(s) 141, 144, 406, 480, 753, 973, 1180, 1564, 2143
BmcAI AGTACT 1 cut(s) 548
Bme1390I CCNGG 3 cut(s) 587, 1424, 1743
BmeT110I CYCGRG 1 cut(s) 692
BmgBI CACGTC 1 cut(s) 1756
BmgT120I GGNCC 2 cut(s) 1334, 1574
BmiI GGNNCC 3 cut(s) 237, 715, 2001
BmrFI CCNGG 3 cut(s) 587, 1424, 1743
BmsI GCATC 5 cut(s) 610, 642, 1857, 2065, 2260
BmtI GCTAGC 1 cut(s) 173
BoxI GACNNNNGTC 1 cut(s) 1647
BpiI GAAGAC 2 cut(s) 142, 2289
BplI GAGNNNNNCTC 6 cut(s) 434, 466, 533, 565, 878, 910
BpmI CTGGAG 1 cut(s) 1083
Bpu10I CCTNAGC 1 cut(s) 2145
Bpu14I TTCGAA 1 cut(s) 219
BpuEI CTTGAG 4 cut(s) 287, 754, 911, 1492
BpuMI CCSGG 1 cut(s) 1743
BsaBI GATNNNNATC 1 cut(s) 34
BsaI GGTCTC 1 cut(s) 1186
BsaJI CCNNGG 5 cut(s) 1026, 1302, 1528, 1742, 1986
BsaXI ACNNNNNCTCC 4 cut(s) 1246, 1276, 1367, 1397
Bsc4I CCNNNNNNNGG 9 cut(s) 96, 97, 98, 268, 469, 538, 974, 1949, 2235
Bse118I RCCGGY 1 cut(s) 469
Bse1I ACTGG 2 cut(s) 787, 1100
Bse21I CCTNAGG 2 cut(s) 1071, 1247
Bse3DI GCAATG 1 cut(s) 1932
Bse8I GATNNNNATC 1 cut(s) 34
BseBI CCWGG 2 cut(s) 587, 1424
BseDI CCNNGG 5 cut(s) 1026, 1302, 1528, 1742, 1986
BseJI GATNNNNATC 1 cut(s) 34
BseLI CCNNNNNNNGG 9 cut(s) 96, 97, 98, 268, 469, 538, 974, 1949, 2235
BseMI GCAATG 1 cut(s) 1932
BseMII CTCAG 9 cut(s) 240, 876, 1181, 1355, 1722, 1842, 1893, 2182, 2372
BseNI ACTGG 2 cut(s) 787, 1100
BsePI GCGCGC 1 cut(s) 1937
BseRI GAGGAG 3 cut(s) 543, 1086, 1388
BseXI GCAGC 8 cut(s) 151, 391, 465, 763, 958, 1165, 1549, 2128
BsgI GTGCAG 1 cut(s) 158
Bsh1236I CGCG 3 cut(s) 145, 1939, 2278
BshFI GGCC 6 cut(s) 161, 335, 355, 1268, 1336, 1575
BsiHKAI GWGCWC 2 cut(s) 1001, 1546
BsiHKCI CYCGRG 1 cut(s) 692
BsiSI CCGG 3 cut(s) 470, 975, 1742
BslFI GGGAC 7 cut(s) 61, 238, 296, 802, 1720, 1760, 1967
BslI CCNNNNNNNGG 9 cut(s) 96, 97, 98, 268, 469, 538, 974, 1949, 2235
BsmAI GTCTC 5 cut(s) 695, 820, 1186, 1727, 2024
BsmFI GGGAC 7 cut(s) 61, 238, 296, 802, 1720, 1760, 1967
BsnI GGCC 6 cut(s) 161, 335, 355, 1268, 1336, 1575
Bso31I GGTCTC 1 cut(s) 1186
BsoBI CYCGRG 1 cut(s) 692
Bsp119I TTCGAA 1 cut(s) 219
Bsp1286I GDGCHC 3 cut(s) 1001, 1546, 1722
BspACI CCGC 8 cut(s) 19, 52, 102, 143, 1252, 1640, 1675, 1680
BspANI GGCC 6 cut(s) 161, 335, 355, 1268, 1336, 1575
BspCNI CTCAG 9 cut(s) 241, 877, 1182, 1356, 1723, 1841, 1894, 2181, 2371
BspFNI CGCG 3 cut(s) 145, 1939, 2278
BspLI GGNNCC 3 cut(s) 237, 715, 2001
BspMAI CTGCAG 1 cut(s) 671
BspMI ACCTGC 1 cut(s) 1415
BspOI GCTAGC 1 cut(s) 173
BspPI GGATC 7 cut(s) 43, 708, 721, 944, 1690, 1914, 2188
BspT104I TTCGAA 1 cut(s) 219
BspTI CTTAAG 2 cut(s) 1912, 2105
BspTNI GGTCTC 1 cut(s) 1186
BsrBI CCGCTC 1 cut(s) 1675
BsrDI GCAATG 1 cut(s) 1932
BsrFI RCCGGY 1 cut(s) 469
BsrI ACTGG 2 cut(s) 787, 1100
BssAI RCCGGY 1 cut(s) 469
BssECI CCNNGG 5 cut(s) 1026, 1302, 1528, 1742, 1986
BssHII GCGCGC 1 cut(s) 1937
BssNAI GTATAC 1 cut(s) 892
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 2 cut(s) 1302, 1528
Bst1107I GTATAC 1 cut(s) 892
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 2 cut(s) 587, 1424
Bst4CI ACNGT 5 cut(s) 178, 344, 459, 839, 847
Bst6I CTCTTC 1 cut(s) 1810
BstAFI CTTAAG 2 cut(s) 1912, 2105
BstAPI GCANNNNNTGC 1 cut(s) 2331
BstBI TTCGAA 1 cut(s) 219
BstC8I GCNNGC 5 cut(s) 171, 969, 1939, 2080, 2139
BstEII GGTNACC 1 cut(s) 920
BstFNI CGCG 3 cut(s) 145, 1939, 2278
BstHHI GCGC 3 cut(s) 1939, 1941, 2278
BstMAI GTCTC 5 cut(s) 695, 820, 1186, 1727, 2024
BstMWI GCNNNNNNNGC 6 cut(s) 475, 1229, 2006, 2015, 2322, 2331
BstNI CCWGG 2 cut(s) 587, 1424
BstNSI RCATGY 3 cut(s) 516, 1509, 2082
BstPAI GACNNNNGTC 1 cut(s) 1647
BstPI GGTNACC 1 cut(s) 920
BstSCI CCNGG 3 cut(s) 585, 1422, 1741
BstSFI CTRYAG 1 cut(s) 667
BstUI CGCG 3 cut(s) 145, 1939, 2278
BstV1I GCAGC 8 cut(s) 151, 391, 465, 763, 958, 1165, 1549, 2128
BstV2I GAAGAC 2 cut(s) 142, 2289
BstX2I RGATCY 3 cut(s) 713, 1958, 2342
BstYI RGATCY 3 cut(s) 713, 1958, 2342
BstZ17I GTATAC 1 cut(s) 892
Bsu36I CCTNAGG 2 cut(s) 1071, 1247
BsuI GTATCC 3 cut(s) 1100, 1483, 2236
BsuRI GGCC 6 cut(s) 161, 335, 355, 1268, 1336, 1575
BtgZI GCGATG 2 cut(s) 582, 1425
BtrI CACGTC 1 cut(s) 1756
BtsI GCAGTG 1 cut(s) 1758
BtsIMutI CAGTG 3 cut(s) 843, 1758, 1899
BveI ACCTGC 1 cut(s) 1415
Cac8I GCNNGC 5 cut(s) 171, 969, 1939, 2080, 2139
CfoI GCGC 3 cut(s) 1939, 1941, 2278
Cfr10I RCCGGY 1 cut(s) 469
Cfr13I GGNCC 2 cut(s) 1334, 1574
CseI GACGC 1 cut(s) 788
Csp6I GTAC 2 cut(s) 495, 547
CviQI GTAC 2 cut(s) 495, 547
DraIII CACNNNGTG 1 cut(s) 1796
DrdI GACNNNNNNGTC 1 cut(s) 1754
DseDI GACNNNNNNGTC 1 cut(s) 1754
EaeI YGGCCR 2 cut(s) 159, 1266
Eam1104I CTCTTC 1 cut(s) 1810
EarI CTCTTC 1 cut(s) 1810
EciI GGCGGA 2 cut(s) 1267, 1695
Eco130I CCWWGG 2 cut(s) 1302, 1528
Eco147I AGGCCT 1 cut(s) 355
Eco24I GRGCYC 1 cut(s) 1722
Eco31I GGTCTC 1 cut(s) 1186
Eco57I CTGAAG 2 cut(s) 975, 2055
Eco81I CCTNAGG 2 cut(s) 1071, 1247
Eco88I CYCGRG 1 cut(s) 692
Eco91I GGTNACC 1 cut(s) 920
EcoO65I GGTNACC 1 cut(s) 920
EcoRI GAATTC 1 cut(s) 82
EcoRII CCWGG 2 cut(s) 585, 1422
EcoT14I CCWWGG 2 cut(s) 1302, 1528
EcoT22I ATGCAT 2 cut(s) 6, 2080
EcoT38I GRGCYC 1 cut(s) 1722
ErhI CCWWGG 2 cut(s) 1302, 1528
FalI AAGNNNNNCTT 6 cut(s) 1100, 1132, 2099, 2131, 2138, 2170
FaqI GGGAC 7 cut(s) 61, 238, 296, 802, 1720, 1760, 1967
FauI CCCGC 4 cut(s) 12, 59, 95, 1668
FauNDI CATATG 1 cut(s) 655
FblI GTMKAC 3 cut(s) 891, 1344, 2112
Fnu4HI GCNGC 9 cut(s) 140, 143, 405, 479, 752, 972, 1179, 1563, 2142
FriOI GRGCYC 1 cut(s) 1722
Fsp4HI GCNGC 9 cut(s) 140, 143, 405, 479, 752, 972, 1179, 1563, 2142
FspBI CTAG 8 cut(s) 170, 183, 293, 464, 492, 792, 813, 864
GlaI GCGC 3 cut(s) 1938, 1940, 2277
GluI GCNGC 9 cut(s) 140, 143, 405, 479, 752, 972, 1179, 1563, 2142
GsuI CTGGAG 1 cut(s) 1083
HaeIII GGCC 6 cut(s) 161, 335, 355, 1268, 1336, 1575
HapII CCGG 3 cut(s) 470, 975, 1742
HgaI GACGC 1 cut(s) 788
HhaI GCGC 3 cut(s) 1939, 1941, 2278
Hin6I GCGC 3 cut(s) 1937, 1939, 2276
HinP1I GCGC 3 cut(s) 1937, 1939, 2276
HincII GTYRAC 2 cut(s) 1345, 2113
HindII GTYRAC 2 cut(s) 1345, 2113
HindIII AAGCTT 2 cut(s) 2243, 2297
HinfI GANTC 8 cut(s) 147, 216, 251, 300, 1382, 1430, 1556, 1631
HpaII CCGG 3 cut(s) 470, 975, 1742
HphI GGTGA 7 cut(s) 447, 530, 914, 1227, 1319, 1496, 2315
Hpy166II GTNNAC 5 cut(s) 617, 892, 1286, 1345, 2113
Hpy188III TCNNGA 9 cut(s) 248, 418, 694, 733, 864, 953, 1108, 1839, 2255
Hpy8I GTNNAC 5 cut(s) 617, 892, 1286, 1345, 2113
Hpy99I CGWCG 3 cut(s) 1062, 1300, 1349
HpyAV CCTTC 9 cut(s) 203, 215, 321, 325, 884, 1034, 1041, 1045, 1210
HpyCH4III ACNGT 5 cut(s) 178, 344, 459, 839, 847
HpyCH4IV ACGT 2 cut(s) 1288, 1755
HpyF10VI GCNNNNNNNGC 6 cut(s) 475, 1229, 2006, 2015, 2322, 2331
HpySE526I ACGT 2 cut(s) 1288, 1755
HspAI GCGC 3 cut(s) 1937, 1939, 2276
LmnI GCTCC 2 cut(s) 1825, 2005
Lsp1109I GCAGC 8 cut(s) 151, 391, 465, 763, 958, 1165, 1549, 2128
LweI GCATC 5 cut(s) 610, 642, 1857, 2065, 2260
MaeI CTAG 8 cut(s) 170, 183, 293, 464, 492, 792, 813, 864
MaeII ACGT 2 cut(s) 1288, 1755
MaeIII GTNAC 5 cut(s) 241, 446, 920, 1756, 2084
MbiI CCGCTC 1 cut(s) 1675
MboII GAAGA 9 cut(s) 142, 709, 1451, 1492, 1797, 1953, 2048, 2294, 2337
MflI RGATCY 3 cut(s) 713, 1958, 2342
MhlI GDGCHC 3 cut(s) 1001, 1546, 1722
MlsI TGGCCA 2 cut(s) 161, 1268
MluCI AATT 9 cut(s) 82, 380, 385, 572, 1276, 1476, 2012, 2064, 2264
MluNI TGGCCA 2 cut(s) 161, 1268
MlyI GAGTC 4 cut(s) 156, 260, 1391, 1439
MmeI TCCRAC 2 cut(s) 691, 1681
Mox20I TGGCCA 2 cut(s) 161, 1268
Mph1103I ATGCAT 2 cut(s) 6, 2080
MscI TGGCCA 2 cut(s) 161, 1268
MslI CAYNNNNRTG 2 cut(s) 848, 2210
Msp20I TGGCCA 2 cut(s) 161, 1268
MspA1I CMGCKG 2 cut(s) 754, 971
MspCI CTTAAG 2 cut(s) 1912, 2105
MspI CCGG 3 cut(s) 470, 975, 1742
MspR9I CCNGG 3 cut(s) 587, 1424, 1743
MvaI CCWGG 2 cut(s) 587, 1424
MvnI CGCG 3 cut(s) 145, 1939, 2278
MwoI GCNNNNNNNGC 6 cut(s) 475, 1229, 2006, 2015, 2322, 2331
NciI CCSGG 1 cut(s) 1743
NdeI CATATG 1 cut(s) 655
NheI GCTAGC 1 cut(s) 169
NlaIV GGNNCC 3 cut(s) 237, 715, 2001
NmuCI GTSAC 3 cut(s) 920, 1756, 2084
NsiI ATGCAT 2 cut(s) 6, 2080
NspI RCATGY 3 cut(s) 516, 1509, 2082
NspV TTCGAA 1 cut(s) 219
PaeI GCATGC 1 cut(s) 2082
PauI GCGCGC 1 cut(s) 1937
PceI AGGCCT 1 cut(s) 355
PfeI GAWTC 4 cut(s) 216, 300, 1556, 1631
PflMI CCANNNNNTGG 1 cut(s) 1949
PkrI GCNGC 9 cut(s) 141, 144, 406, 480, 753, 973, 1180, 1564, 2143
PleI GAGTC 4 cut(s) 155, 259, 1390, 1438
PpsI GAGTC 4 cut(s) 155, 259, 1390, 1438
PshAI GACNNNNGTC 1 cut(s) 1647
Psp6I CCWGG 2 cut(s) 585, 1422
PspEI GGTNACC 1 cut(s) 920
PspGI CCWGG 2 cut(s) 585, 1422
PspN4I GGNNCC 3 cut(s) 237, 715, 2001
PspPI GGNCC 2 cut(s) 1334, 1574
PstI CTGCAG 1 cut(s) 671
PsuI RGATCY 3 cut(s) 713, 1958, 2342
PteI GCGCGC 1 cut(s) 1937
PvuII CAGCTG 2 cut(s) 754, 971
RsaI GTAC 2 cut(s) 496, 548
RsaNI GTAC 2 cut(s) 495, 547
RseI CAYNNNNRTG 2 cut(s) 848, 2210
SalI GTCGAC 2 cut(s) 1343, 2111
SatI GCNGC 9 cut(s) 140, 143, 405, 479, 752, 972, 1179, 1563, 2142
Sau96I GGNCC 2 cut(s) 1334, 1574
SbfI CCTGCAGG 1 cut(s) 671
ScaI AGTACT 1 cut(s) 548
SchI GAGTC 4 cut(s) 156, 260, 1391, 1439
ScrFI CCNGG 3 cut(s) 587, 1424, 1743
SdaI CCTGCAGG 1 cut(s) 671
SduI GDGCHC 3 cut(s) 1001, 1546, 1722
SfaNI GCATC 5 cut(s) 610, 642, 1857, 2065, 2260
SfcI CTRYAG 1 cut(s) 667
SfuI TTCGAA 1 cut(s) 219
SmiMI CAYNNNNRTG 2 cut(s) 848, 2210
SmlI CTYRAG 6 cut(s) 266, 733, 926, 1471, 1912, 2105
SmoI CTYRAG 6 cut(s) 266, 733, 926, 1471, 1912, 2105
SpeI ACTAGT 2 cut(s) 491, 812
SphI GCATGC 1 cut(s) 2082
Sse8387I CCTGCAGG 1 cut(s) 671
Sse9I AATT 9 cut(s) 82, 380, 385, 572, 1276, 1476, 2012, 2064, 2264
SseBI AGGCCT 1 cut(s) 355
SsiI CCGC 8 cut(s) 19, 52, 102, 143, 1252, 1640, 1675, 1680
SspMI CTAG 8 cut(s) 170, 183, 293, 464, 492, 792, 813, 864
StuI AGGCCT 1 cut(s) 355
StyD4I CCNGG 3 cut(s) 585, 1422, 1741
StyI CCWWGG 2 cut(s) 1302, 1528
TaaI ACNGT 5 cut(s) 178, 344, 459, 839, 847
TaiI ACGT 2 cut(s) 1291, 1758
TaqI TCGA 6 cut(s) 219, 896, 1142, 1344, 1850, 2112
TasI AATT 9 cut(s) 82, 380, 385, 572, 1276, 1476, 2012, 2064, 2264
TatI WGTACW 1 cut(s) 546
TauI GCSGC 1 cut(s) 145
TfiI GAWTC 4 cut(s) 216, 300, 1556, 1631
TscAI CASTG 3 cut(s) 850, 1765, 1906
TseFI GTSAC 3 cut(s) 920, 1756, 2084
TseI GCWGC 8 cut(s) 139, 404, 478, 751, 971, 1178, 1562, 2141
Tsp45I GTSAC 3 cut(s) 920, 1756, 2084
TspDTI ATGAA 5 cut(s) 97, 1242, 1289, 1953, 2107
TspRI CASTG 3 cut(s) 850, 1765, 1906
Van91I CCANNNNNTGG 1 cut(s) 1949
Vha464I CTTAAG 2 cut(s) 1912, 2105
XapI RAATTY 5 cut(s) 82, 380, 1276, 1476, 2012
XbaI TCTAGA 1 cut(s) 863
XceI RCATGY 3 cut(s) 516, 1509, 2082
XmiI GTMKAC 3 cut(s) 891, 1344, 2112
XspI CTAG 8 cut(s) 170, 183, 293, 464, 492, 792, 813, 864
ZrmI AGTACT 1 cut(s) 548
Zsp2I ATGCAT 2 cut(s) 6, 2080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.