Rmu_sc0003441.1_g000042

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003441.1
OG0000153
Physical Location & Seq
Reverse (-)
193467 .. 195810
2344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003441.1_g000042.1.cds

Sequence Viewer

Length: 1608 bp
atgggtgtcatgtctagacttaaccttccttatactgaggtatactcaaatggtacaaagcatgtggttggtcacctcaagggtggtaaaagtggagacgatcctgaagtagagctgccagctgccggaatagagaaaggtagcaagagtgcaacaaagggtaaagtcagggcttccgaggatggaggggaaagtaaaaggaaggtttgccgcttcaaacctaaggtggccaaagatcgtatccctcctccagtagtcaagagtgcctttggtgttaaagtgatactgccatcgagtttggcttgtgaaaaagggaagaagaggaaagctgcttctaccctgagaccaagtggggttattaagaggaaggttgcagatgatgcctcacctgctgtccttaggcggagttctcgcgtggccaacatgaacttttataaacgtaaaccgtcgtctaagggtgatgtttatgttgatcttagtgatgggccaagtgttgacggggatggtagccccctgagtgatgaggatagtgagtctaatacttatgagggaaagacctgcgatgatggtagccaggtggagtcttttgaagatgaggatggtcagggagctcatgttgctgtcgtggtgggggattacgagcataatgttagtggaatacacaaccgaggcctactgcatgaatctactgtagatgtcggtccttgtgcagataattgtaacaagcaggatgttgatatcaatgacttggtgaaagagtccgttgcagatgatagtctttgcgaggatgaccataatgagcggggtggatcggttttgttgatggttggagggacatcgtttgagccccacctccctgagacagcactgggggacaacgatgtcactgcgacaatcttggtcagtagaggaactccactttgtgcttcctcctcttgctctcttgctcctagctcagataaatcaggaagtgtgtcaaggactgatttggagatgcggtttagaaaatttcttgcttgttttgacactgaggatcgcttaagtattactattgatgacattgcgcgcccattgagtggtatcagatcttcatttgagggtgggaaagtcccctcagagttcgtggccccacttactaaatttgctggaaggtatggtggaggtagcttctctagcttgtttgcagatggaaagagtgcccgtcagaaacaaaaattggaggagtttggttttgtgttgtatagcatggaaattgaggaagtgaaaagtgaggagacttttttagtttggagggacgcatgtcgtgacatcatagattgggggcttaaagtcgacttcatgctggattatttgaagcaagctgctagggatttctttggttatatgctcagagccagtggatcagagagtagttgcagggagatcattcaaatggaggaagctatttccaagttgagggaaaagctttcgcatcttgaacaacaattaggaaaggcgcgagaagacttatgcaccaagcttggtgacgacattagcttagataacaagtcctgcatattaaaatcttcttgggttgctcagagccgtgcaacttatggcttgtattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

535

Amino Acids

58.13

Weight (kDa)

5.53

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 435
AarI CACCTGC 1 cut(s) 397
AasI GACNNNNNNGTC 1 cut(s) 881
Acc36I ACCTGC 2 cut(s) 397, 566
AccB7I CCANNNNNTGG 1 cut(s) 1076
AccBSI CCGCTC 1 cut(s) 802
AccI GTMKAC 2 cut(s) 42, 1332
AccII CGCG 3 cut(s) 414, 1066, 1498
AciI CCGC 4 cut(s) 211, 403, 802, 997
AclWI GGATC 4 cut(s) 95, 817, 1041, 1408
AcoI YGGCCR 2 cut(s) 228, 417
AcsI RAATTY 2 cut(s) 1007, 1139
AcuI CTGAAG 1 cut(s) 126
AdeI CACNNNGTG 1 cut(s) 923
AfaI GTAC 1 cut(s) 55
AfiI CCNNNNNNNGG 3 cut(s) 125, 1076, 1455
AflII CTTAAG 1 cut(s) 1039
AgsI TTSAA 5 cut(s) 217, 590, 1354, 1430, 1478
AjnI CCWGG 1 cut(s) 573
AjuI GAANNNNNNNTTGG 2 cut(s) 1199, 1231
Alw21I GWGCWC 1 cut(s) 613
Alw26I GTCTC 4 cut(s) 90, 337, 854, 1268
AlwI GGATC 4 cut(s) 95, 817, 1041, 1408
AoxI GGCC 5 cut(s) 228, 417, 485, 670, 1125
ApeKI GCWGC 4 cut(s) 115, 122, 329, 1361
ApoI RAATTY 2 cut(s) 1007, 1139
AspLEI GCGC 3 cut(s) 1066, 1068, 1498
AspS9I GGNCC 3 cut(s) 485, 701, 1126
AsuHPI GGTGA 5 cut(s) 65, 378, 470, 763, 1535
AvaII GGWCC 1 cut(s) 701
AxyI CCTNAGG 2 cut(s) 222, 398
BaeGI GKGCMC 1 cut(s) 1201
BalI TGGCCA 2 cut(s) 230, 419
BanII GRGCYC 2 cut(s) 613, 849
BarI GAAGNNNNNNTAC 2 cut(s) 1072, 1104
BbsI GAAGAC 1 cut(s) 1509
Bbv12I GWGCWC 1 cut(s) 613
BbvI GCAGC 4 cut(s) 102, 109, 316, 1348
BccI CCATC 8 cut(s) 176, 298, 476, 497, 560, 593, 817, 1181
BceAI ACGGC 1 cut(s) 1569
BcgI CGANNNNNNTGC 2 cut(s) 869, 903
BciT130I CCWGG 1 cut(s) 575
BciVI GTATCC 1 cut(s) 251
BcoDI GTCTC 4 cut(s) 90, 337, 854, 1268
BfaI CTAG 4 cut(s) 15, 951, 1173, 1365
BfmI CTRYAG 1 cut(s) 690
BfrI CTTAAG 1 cut(s) 1039
BfuAI ACCTGC 2 cut(s) 397, 566
BfuI GTATCC 1 cut(s) 251
BglII AGATCT 1 cut(s) 1085
BisI GCNGC 5 cut(s) 116, 123, 211, 330, 1362
BlsI GCNGC 5 cut(s) 117, 124, 212, 331, 1363
Bme1390I CCNGG 1 cut(s) 575
Bme18I GGWCC 1 cut(s) 701
BmgT120I GGNCC 3 cut(s) 485, 701, 1126
BmiI GGNNCC 1 cut(s) 1128
BmrFI CCNGG 1 cut(s) 575
BmrI ACTGGG 1 cut(s) 878
BmsI GCATC 3 cut(s) 370, 984, 1480
BmuI ACTGGG 1 cut(s) 878
BoxI GACNNNNGTC 1 cut(s) 1299
BpiI GAAGAC 1 cut(s) 1509
BplI GAGNNNNNCTC 2 cut(s) 29, 61
BpmI CTGGAG 1 cut(s) 234
BpuEI CTTGAG 1 cut(s) 62
BsaI GGTCTC 1 cut(s) 337
BsaJI CCNNGG 2 cut(s) 177, 667
BsaXI ACNNNNNCTCC 4 cut(s) 600, 630, 983, 1013
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 1076, 1455
Bse1I ACTGG 3 cut(s) 251, 873, 1395
Bse21I CCTNAGG 2 cut(s) 222, 398
Bse3DI GCAATG 1 cut(s) 1059
BseBI CCWGG 1 cut(s) 575
BseDI CCNNGG 2 cut(s) 177, 667
BseGI GGATG 5 cut(s) 187, 508, 604, 736, 793
BseLI CCNNNNNNNGG 3 cut(s) 125, 1076, 1455
BseMI GCAATG 1 cut(s) 1059
BseMII CTCAG 9 cut(s) 27, 332, 506, 849, 969, 1020, 1128, 1402, 1592
BseNI ACTGG 3 cut(s) 251, 873, 1395
BsePI GCGCGC 1 cut(s) 1064
BseRI GAGGAG 4 cut(s) 237, 922, 1235, 1286
BseSI GKGCMC 1 cut(s) 1201
BseXI GCAGC 4 cut(s) 102, 109, 316, 1348
BsgI GTGCAG 1 cut(s) 729
Bsh1236I CGCG 3 cut(s) 414, 1066, 1498
BshFI GGCC 5 cut(s) 230, 419, 487, 672, 1127
BsiHKAI GWGCWC 1 cut(s) 613
BsiSI CCGG 1 cut(s) 126
BslFI GGGAC 4 cut(s) 847, 887, 1094, 1307
BslI CCNNNNNNNGG 3 cut(s) 125, 1076, 1455
BsmAI GTCTC 4 cut(s) 90, 337, 854, 1268
BsmBI CGTCTC 1 cut(s) 90
BsmFI GGGAC 4 cut(s) 847, 887, 1094, 1307
BsnI GGCC 5 cut(s) 230, 419, 487, 672, 1127
Bso31I GGTCTC 1 cut(s) 337
Bsp1286I GDGCHC 3 cut(s) 613, 849, 1201
Bsp143I GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
BspACI CCGC 4 cut(s) 211, 403, 802, 997
BspANI GGCC 5 cut(s) 230, 419, 487, 672, 1127
BspCNI CTCAG 9 cut(s) 28, 333, 507, 850, 968, 1021, 1127, 1401, 1591
BspFNI CGCG 3 cut(s) 414, 1066, 1498
BspLI GGNNCC 1 cut(s) 1128
BspMI ACCTGC 2 cut(s) 397, 566
BspPI GGATC 4 cut(s) 95, 817, 1041, 1408
BspTI CTTAAG 1 cut(s) 1039
BspTNI GGTCTC 1 cut(s) 337
BsrBI CCGCTC 1 cut(s) 802
BsrDI GCAATG 1 cut(s) 1059
BsrI ACTGG 3 cut(s) 251, 873, 1395
BssECI CCNNGG 2 cut(s) 177, 667
BssHII GCGCGC 1 cut(s) 1064
BssMI GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
BssNAI GTATAC 1 cut(s) 43
Bst1107I GTATAC 1 cut(s) 43
Bst2UI CCWGG 1 cut(s) 575
Bst4CI ACNGT 2 cut(s) 447, 691
Bst6I CTCTTC 1 cut(s) 314
BstAFI CTTAAG 1 cut(s) 1039
BstAPI GCANNNNNTGC 1 cut(s) 380
BstC8I GCNNGC 3 cut(s) 120, 1066, 1359
BstEII GGTNACC 1 cut(s) 71
BstF5I GGATG 5 cut(s) 187, 508, 604, 736, 793
BstFNI CGCG 3 cut(s) 414, 1066, 1498
BstHHI GCGC 3 cut(s) 1066, 1068, 1498
BstKTI GATC 8 cut(s) 103, 238, 475, 812, 1036, 1088, 1403, 1425
BstMAI GTCTC 4 cut(s) 90, 337, 854, 1268
BstMBI GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
BstMWI GCNNNNNNNGC 4 cut(s) 380, 389, 617, 1173
BstNI CCWGG 1 cut(s) 575
BstNSI RCATGY 2 cut(s) 65, 1302
BstPAI GACNNNNGTC 1 cut(s) 1299
BstPI GGTNACC 1 cut(s) 71
BstSCI CCNGG 1 cut(s) 573
BstSFI CTRYAG 1 cut(s) 690
BstSLI GKGCMC 1 cut(s) 1201
BstUI CGCG 3 cut(s) 414, 1066, 1498
BstV1I GCAGC 4 cut(s) 102, 109, 316, 1348
BstV2I GAAGAC 1 cut(s) 1509
BstX2I RGATCY 1 cut(s) 1085
BstYI RGATCY 1 cut(s) 1085
BstZ17I GTATAC 1 cut(s) 43
Bsu36I CCTNAGG 2 cut(s) 222, 398
BsuI GTATCC 1 cut(s) 251
BsuRI GGCC 5 cut(s) 230, 419, 487, 672, 1127
BtgZI GCGATG 1 cut(s) 576
BtsCI GGATG 5 cut(s) 187, 508, 604, 736, 793
BtsI GCAGTG 1 cut(s) 885
BtsIMutI CAGTG 4 cut(s) 866, 885, 1026, 1402
BveI ACCTGC 2 cut(s) 397, 566
Cac8I GCNNGC 3 cut(s) 120, 1066, 1359
CfoI GCGC 3 cut(s) 1066, 1068, 1498
Cfr13I GGNCC 3 cut(s) 485, 701, 1126
CseI GACGC 1 cut(s) 1304
Csp6I GTAC 1 cut(s) 54
CspCI CAANNNNNGTGG 2 cut(s) 45, 80
CviAII CATG 8 cut(s) 10, 62, 424, 614, 680, 1246, 1299, 1339
CviQI GTAC 1 cut(s) 54
DpnI GATC 8 cut(s) 102, 237, 474, 811, 1035, 1087, 1402, 1424
DpnII GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
DraIII CACNNNGTG 1 cut(s) 923
DrdI GACNNNNNNGTC 1 cut(s) 881
DseDI GACNNNNNNGTC 1 cut(s) 881
EaeI YGGCCR 2 cut(s) 228, 417
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
EciI GGCGGA 1 cut(s) 418
Ecl136II GAGCTC 1 cut(s) 611
Eco147I AGGCCT 1 cut(s) 672
Eco24I GRGCYC 2 cut(s) 613, 849
Eco31I GGTCTC 1 cut(s) 337
Eco32I GATATC 1 cut(s) 739
Eco47I GGWCC 1 cut(s) 701
Eco53kI GAGCTC 1 cut(s) 611
Eco57I CTGAAG 1 cut(s) 126
Eco81I CCTNAGG 2 cut(s) 222, 398
Eco91I GGTNACC 1 cut(s) 71
EcoICRI GAGCTC 1 cut(s) 611
EcoO65I GGTNACC 1 cut(s) 71
EcoRII CCWGG 1 cut(s) 573
EcoRV GATATC 1 cut(s) 739
EcoT38I GRGCYC 2 cut(s) 613, 849
Esp3I CGTCTC 1 cut(s) 90
FaeI CATG 8 cut(s) 13, 65, 427, 617, 683, 1249, 1302, 1342
FalI AAGNNNNNCTT 2 cut(s) 251, 283
FaqI GGGAC 4 cut(s) 847, 887, 1094, 1307
FatI CATG 8 cut(s) 9, 61, 423, 613, 679, 1245, 1298, 1338
FauI CCCGC 1 cut(s) 795
FblI GTMKAC 2 cut(s) 42, 1332
Fnu4HI GCNGC 5 cut(s) 116, 123, 211, 330, 1362
FokI GGATG 5 cut(s) 194, 515, 611, 743, 800
FriOI GRGCYC 2 cut(s) 613, 849
Fsp4HI GCNGC 5 cut(s) 116, 123, 211, 330, 1362
FspBI CTAG 4 cut(s) 15, 951, 1173, 1365
GlaI GCGC 3 cut(s) 1065, 1067, 1497
GluI GCNGC 5 cut(s) 116, 123, 211, 330, 1362
GsuI CTGGAG 1 cut(s) 234
HaeIII GGCC 5 cut(s) 230, 419, 487, 672, 1127
HapII CCGG 1 cut(s) 126
HgaI GACGC 1 cut(s) 1304
HhaI GCGC 3 cut(s) 1066, 1068, 1498
Hin1II CATG 8 cut(s) 13, 65, 427, 617, 683, 1249, 1302, 1342
Hin6I GCGC 3 cut(s) 1064, 1066, 1496
HinP1I GCGC 3 cut(s) 1064, 1066, 1496
HincII GTYRAC 2 cut(s) 496, 1333
HindII GTYRAC 2 cut(s) 496, 1333
HindIII AAGCTT 2 cut(s) 1463, 1517
HinfI GANTC 4 cut(s) 533, 581, 683, 758
HpaII CCGG 1 cut(s) 126
HphI GGTGA 5 cut(s) 65, 378, 470, 763, 1535
Hpy166II GTNNAC 4 cut(s) 43, 443, 496, 1333
Hpy188I TCNGA 8 cut(s) 178, 958, 1085, 1117, 1206, 1391, 1405, 1581
Hpy188III TCNNGA 6 cut(s) 15, 104, 259, 966, 1304, 1475
Hpy8I GTNNAC 4 cut(s) 43, 443, 496, 1333
Hpy99I CGWCG 1 cut(s) 451
HpyAV CCTTC 4 cut(s) 35, 196, 361, 1143
HpyCH4III ACNGT 2 cut(s) 447, 691
HpyCH4IV ACGT 1 cut(s) 439
HpyF10VI GCNNNNNNNGC 4 cut(s) 380, 389, 617, 1173
HpySE526I ACGT 1 cut(s) 439
Hsp92II CATG 8 cut(s) 13, 65, 427, 617, 683, 1249, 1302, 1342
HspAI GCGC 3 cut(s) 1064, 1066, 1496
Kzo9I GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
LmnI GCTCC 2 cut(s) 608, 952
Lsp1109I GCAGC 4 cut(s) 102, 109, 316, 1348
LweI GCATC 3 cut(s) 370, 984, 1480
MaeI CTAG 4 cut(s) 15, 951, 1173, 1365
MaeII ACGT 1 cut(s) 439
MaeIII GTNAC 5 cut(s) 71, 719, 883, 1304, 1523
MalI GATC 8 cut(s) 102, 237, 474, 811, 1035, 1087, 1402, 1424
MbiI CCGCTC 1 cut(s) 802
MboI GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
MboII GAAGA 6 cut(s) 328, 331, 602, 1080, 1514, 1557
MflI RGATCY 1 cut(s) 1085
MhlI GDGCHC 3 cut(s) 613, 849, 1201
MlsI TGGCCA 2 cut(s) 230, 419
MluCI AATT 6 cut(s) 715, 1007, 1139, 1214, 1251, 1484
MluNI TGGCCA 2 cut(s) 230, 419
MlyI GAGTC 3 cut(s) 542, 590, 767
MmeI TCCRAC 1 cut(s) 808
Mox20I TGGCCA 2 cut(s) 230, 419
MscI TGGCCA 2 cut(s) 230, 419
MseI TTAA 6 cut(s) 21, 276, 360, 1040, 1326, 1559
MslI CAYNNNNRTG 1 cut(s) 1430
Msp20I TGGCCA 2 cut(s) 230, 419
MspA1I CMGCKG 1 cut(s) 122
MspCI CTTAAG 1 cut(s) 1039
MspI CCGG 1 cut(s) 126
MspR9I CCNGG 1 cut(s) 575
MvaI CCWGG 1 cut(s) 575
MvnI CGCG 3 cut(s) 414, 1066, 1498
MwoI GCNNNNNNNGC 4 cut(s) 380, 389, 617, 1173
NdeII GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
NlaIII CATG 8 cut(s) 13, 65, 427, 617, 683, 1249, 1302, 1342
NlaIV GGNNCC 1 cut(s) 1128
NmuCI GTSAC 4 cut(s) 71, 883, 1304, 1523
NspI RCATGY 2 cut(s) 65, 1302
PaqCI CACCTGC 1 cut(s) 397
PauI GCGCGC 1 cut(s) 1064
PceI AGGCCT 1 cut(s) 672
PfeI GAWTC 1 cut(s) 683
PflMI CCANNNNNTGG 1 cut(s) 1076
PkrI GCNGC 5 cut(s) 117, 124, 212, 331, 1363
PleI GAGTC 3 cut(s) 541, 589, 766
PpsI GAGTC 3 cut(s) 541, 589, 766
PshAI GACNNNNGTC 1 cut(s) 1299
PsiI TTATAA 1 cut(s) 435
Psp124BI GAGCTC 1 cut(s) 613
Psp6I CCWGG 1 cut(s) 573
PspEI GGTNACC 1 cut(s) 71
PspGI CCWGG 1 cut(s) 573
PspN4I GGNNCC 1 cut(s) 1128
PspPI GGNCC 3 cut(s) 485, 701, 1126
PsuI RGATCY 1 cut(s) 1085
PteI GCGCGC 1 cut(s) 1064
PvuII CAGCTG 1 cut(s) 122
RsaI GTAC 1 cut(s) 55
RsaNI GTAC 1 cut(s) 54
RseI CAYNNNNRTG 1 cut(s) 1430
SacI GAGCTC 1 cut(s) 613
SalI GTCGAC 1 cut(s) 1331
SaqAI TTAA 6 cut(s) 21, 276, 360, 1040, 1326, 1559
SatI GCNGC 5 cut(s) 116, 123, 211, 330, 1362
Sau3AI GATC 8 cut(s) 100, 235, 472, 809, 1033, 1085, 1400, 1422
Sau96I GGNCC 3 cut(s) 485, 701, 1126
SchI GAGTC 3 cut(s) 542, 590, 767
ScrFI CCNGG 1 cut(s) 575
SduI GDGCHC 3 cut(s) 613, 849, 1201
SfaNI GCATC 3 cut(s) 370, 984, 1480
SfcI CTRYAG 1 cut(s) 690
SinI GGWCC 1 cut(s) 701
SmiMI CAYNNNNRTG 1 cut(s) 1430
SmlI CTYRAG 2 cut(s) 77, 1039
SmoI CTYRAG 2 cut(s) 77, 1039
Sse9I AATT 6 cut(s) 715, 1007, 1139, 1214, 1251, 1484
SseBI AGGCCT 1 cut(s) 672
SsiI CCGC 4 cut(s) 211, 403, 802, 997
SspMI CTAG 4 cut(s) 15, 951, 1173, 1365
SstI GAGCTC 1 cut(s) 613
StuI AGGCCT 1 cut(s) 672
StyD4I CCNGG 1 cut(s) 573
TaaI ACNGT 2 cut(s) 447, 691
TaiI ACGT 1 cut(s) 442
TaqI TCGA 2 cut(s) 293, 1332
TaqII GACCGA 1 cut(s) 689
TasI AATT 6 cut(s) 715, 1007, 1139, 1214, 1251, 1484
TauI GCSGC 1 cut(s) 213
TfiI GAWTC 1 cut(s) 683
Tru1I TTAA 6 cut(s) 21, 276, 360, 1040, 1326, 1559
Tru9I TTAA 6 cut(s) 21, 276, 360, 1040, 1326, 1559
TscAI CASTG 4 cut(s) 873, 892, 1033, 1402
TseFI GTSAC 4 cut(s) 71, 883, 1304, 1523
TseI GCWGC 4 cut(s) 115, 122, 329, 1361
Tsp45I GTSAC 4 cut(s) 71, 883, 1304, 1523
TspDTI ATGAA 4 cut(s) 440, 696, 1080, 1327
TspGWI ACGGA 1 cut(s) 751
TspRI CASTG 4 cut(s) 873, 892, 1033, 1402
Van91I CCANNNNNTGG 1 cut(s) 1076
Vha464I CTTAAG 1 cut(s) 1039
VpaK11BI GGWCC 1 cut(s) 701
XapI RAATTY 2 cut(s) 1007, 1139
XbaI TCTAGA 1 cut(s) 14
XceI RCATGY 2 cut(s) 65, 1302
XmiI GTMKAC 2 cut(s) 42, 1332
XspI CTAG 4 cut(s) 15, 951, 1173, 1365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.