Rorug07G0190700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000153
Physical Location & Seq
Reverse (-)
16139933 .. 16142183
2251 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0190700.1

Sequence Viewer

Length: 1590 bp
ATGGCACCCTCTTATGAATTCTTCATGGAATCCAATTCCTTATCCTCACTGTGGTCGGAAAACAACAGCGAGAGTTGGGGAGTGTTGTTCACTATCTCCGCAATTTTTGCAGCAATTTTTTACGCATGGAGTTGCCTGAAGAGTAGCAGAATCTCGCCGCCGTTGCCTCCCGGTCCACGCGGCCTCCCGCTGGTTGGTAATCTTCTGTCCGTTGACCCACAGCTCCACACCTACTTTGCGGGCCTATCCAAAACTTACGGCCCAATCTATAAGCTCCGACTGGGTACCAGGCTCTGTGTCGTAATAGCCTCCCCTTCCGCCGCGCGAGAGGTGCTCAAGGAGAACGACCTCACGTTCTCCAGTCGCGGCGTCAATTGTGCAGCTGGGGACGTCGCACTCTACGGCGGGGCAGGTATAGTTTGTACCCCGTACGGGCCGGAGTGGCGAATGTTGAGGAAAGTGTGCGTGCTCAAGATGCTTAGCAACACCGCCTTGGACTCGGTTCACCAACTGCGCCACTCGCAGGTCCGAAAAGCTGTGCGTTACTTCTACAGTCAGGTCGGATCGCCCGTCAACATTGGTGAGCAACTTTTCGTGGCCACGCTCAATCTTACCACCAACATGTTATGGGGTGGCACCATGCTGGAGGAGGAGGCTGGGGCCGAGGTTTTGGCGGAGTTTAGGGAAGCGATGGTCGACATCGCGGTGCTTTCTGGGAAACCGAATATTTCGGAGCTTTATCCGTTTTTGACCCGGTTTGATGTGCAAGGCATAAGGAAGCAGATGAAGGCTGTGGAGCTCAAGTTTGATAGCATTTTTGAGAAAGTTATTGATCAACGGTTGAAAATGGACAAACAAGGCGCGCAAGAGAGCAAGGATTTCTTGACATTTATGTTGCGATATAAAGATGAAGGAGGAGATGCCAAAACTCCTCTCACCATGACCCATCTCAAAGCCTTGCTCTTGGATATGGTTGTGGGTGGGAGTGACACATCCTCCAACACAATTGAGTTTGCAATGGCTGAAATGATGAACAAACCAGAAGTGATAGAGAAAGCCCAGAAAGAATTAGACGCTGTAGTTGGAAAAGACAGTATCGTACAAGAGTCTCATATTCACAAACTGCCATACTTGGAAGCTGTGATGAAAGAAACTCTGCGCTTGCACCCAGCCCTGCCTCTAATGCTCCCACATTGCCCAAGTGAAACATGCATTGTGGGAGGTTATACCATTCCAAAGGGGTCTAAGGTTTTTGTTAATGTGTGGGATATCCACAGAGACCCTTCTACCTGGGAAGACCCATTAGAGTTTAATCCAGAGAGGTTCTTGGATGGTAAATATGACTTCACTGGAAGTAACTTCAACTACTTTCCATTTGGGAGTGGAAAAAGAATATGTCCAGGGACAGCAACGGCAGAGAGGCTTGTCATGCATTTACTTGCATCACTGTTGCATTCTTTTGACTGGAAACTACCACAAGGAGAGACGAAGGTGGATTCTTCCGAAAAGTTTGGGATGGTGATGATGAAGAAGGTACCTATGGTTGCCATCCCAACTCCAAGGTTATTGGATTCAGAGCTTTATCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

529

Amino Acids

59.0

Weight (kDa)

6.3

Isoelectric Point (pI)

39.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 56 - 512 8.3e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 393
Acc36I ACCTGC 2 cut(s) 401, 514
Acc65I GGTACC 2 cut(s) 284, 1534
AccB1I GGYRCC 4 cut(s) 4, 284, 635, 1534
AccI GTMKAC 1 cut(s) 696
AccII CGCG 6 cut(s) 180, 323, 325, 366, 704, 863
AclWI GGATC 1 cut(s) 571
AcoI YGGCCR 1 cut(s) 597
AcsI RAATTY 1 cut(s) 17
AcuI CTGAAG 1 cut(s) 158
AcyI GRCGYC 2 cut(s) 369, 390
AfaI GTAC 5 cut(s) 286, 424, 431, 1101, 1536
AfiI CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
AflIII ACRYGT 1 cut(s) 621
AgsI TTSAA 2 cut(s) 844, 1363
AjnI CCWGG 3 cut(s) 287, 1289, 1399
AluBI AGCT 8 cut(s) 223, 274, 383, 536, 736, 799, 1139, 1579
AluI AGCT 8 cut(s) 223, 274, 383, 536, 736, 799, 1139, 1579
Alw21I GWGCWC 3 cut(s) 336, 471, 801
Alw26I GTCTC 3 cut(s) 1113, 1272, 1478
AlwI GGATC 1 cut(s) 571
AlwNI CAGNNNCTG 1 cut(s) 294
AoxI GGCC 6 cut(s) 181, 241, 259, 434, 597, 660
ApeKI GCWGC 2 cut(s) 110, 380
ApoI RAATTY 1 cut(s) 17
Asp718I GGTACC 2 cut(s) 284, 1534
AspLEI GCGC 5 cut(s) 325, 516, 863, 865, 1161
AspS9I GGNCC 6 cut(s) 173, 241, 260, 434, 526, 660
AsuC2I CCSGG 2 cut(s) 171, 754
AsuHPI GGTGA 4 cut(s) 497, 593, 928, 1531
AvaII GGWCC 2 cut(s) 173, 526
BalI TGGCCA 1 cut(s) 599
BanI GGYRCC 4 cut(s) 4, 284, 635, 1534
BanII GRGCYC 1 cut(s) 801
BbsI GAAGAC 1 cut(s) 1302
Bbv12I GWGCWC 3 cut(s) 336, 471, 801
BbvI GCAGC 2 cut(s) 122, 392
BccI CCATC 5 cut(s) 685, 954, 1325, 1510, 1556
BceAI ACGGC 4 cut(s) 145, 274, 418, 1428
BciT130I CCWGG 3 cut(s) 289, 1291, 1401
BclI TGATCA 1 cut(s) 832
BcnI CCSGG 2 cut(s) 171, 754
BcoDI GTCTC 3 cut(s) 1113, 1272, 1478
BfmI CTRYAG 2 cut(s) 550, 1077
BfuAI ACCTGC 2 cut(s) 401, 514
BglI GCCNNNNNGGC 1 cut(s) 442
BisI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
BlpI GCTNAGC 1 cut(s) 479
BlsI GCNGC 6 cut(s) 112, 159, 182, 322, 368, 382
Bme1390I CCNGG 5 cut(s) 171, 289, 754, 1291, 1401
Bme18I GGWCC 2 cut(s) 173, 526
BmgT120I GGNCC 6 cut(s) 173, 241, 260, 434, 526, 660
BmiI GGNNCC 5 cut(s) 6, 286, 637, 661, 1536
BmrFI CCNGG 5 cut(s) 171, 289, 754, 1291, 1401
BmrI ACTGGG 1 cut(s) 290
BmsI GCATC 3 cut(s) 465, 910, 1451
BmuI ACTGGG 1 cut(s) 290
BpiI GAAGAC 1 cut(s) 1302
BplI GAGNNNNNCTC 2 cut(s) 318, 350
BpmI CTGGAG 2 cut(s) 343, 665
Bpu1102I GCTNAGC 1 cut(s) 479
BpuEI CTTGAG 3 cut(s) 320, 455, 785
BpuMI CCSGG 2 cut(s) 171, 754
BsaHI GRCGYC 2 cut(s) 369, 390
BsaI GGTCTC 1 cut(s) 1272
BsaJI CCNNGG 5 cut(s) 492, 663, 1290, 1400, 1559
BsaXI ACNNNNNCTCC 6 cut(s) 168, 198, 788, 818, 980, 1010
Bsc4I CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
Bse1I ACTGG 4 cut(s) 285, 360, 1354, 1469
Bse3DI GCAATG 2 cut(s) 1023, 1192
BseBI CCWGG 3 cut(s) 289, 1291, 1401
BseDI CCNNGG 5 cut(s) 492, 663, 1290, 1400, 1559
BseGI GGATG 4 cut(s) 992, 1336, 1521, 1548
BseLI CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
BseMI GCAATG 2 cut(s) 1023, 1192
BseNI ACTGG 4 cut(s) 285, 360, 1354, 1469
BsePI GCGCGC 1 cut(s) 861
BseRI GAGGAG 4 cut(s) 662, 665, 921, 930
BseXI GCAGC 2 cut(s) 122, 392
BseYI CCCAGC 3 cut(s) 383, 656, 1168
BsgI GTGCAG 1 cut(s) 399
Bsh1236I CGCG 6 cut(s) 180, 323, 325, 366, 704, 863
BshFI GGCC 6 cut(s) 183, 243, 261, 436, 599, 662
BshNI GGYRCC 4 cut(s) 4, 284, 635, 1534
BsiHKAI GWGCWC 3 cut(s) 336, 471, 801
BsiSI CCGG 3 cut(s) 171, 437, 754
BsiWI CGTACG 1 cut(s) 429
BslFI GGGAC 2 cut(s) 401, 1417
BslI CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
BsmAI GTCTC 3 cut(s) 1113, 1272, 1478
BsmBI CGTCTC 1 cut(s) 1478
BsmFI GGGAC 2 cut(s) 401, 1417
BsmI GAATGC 1 cut(s) 1453
BsnI GGCC 6 cut(s) 183, 243, 261, 436, 599, 662
Bso31I GGTCTC 1 cut(s) 1272
Bsp1286I GDGCHC 3 cut(s) 336, 471, 801
Bsp143I GATC 2 cut(s) 563, 832
Bsp1720I GCTNAGC 1 cut(s) 479
BspANI GGCC 6 cut(s) 183, 243, 261, 436, 599, 662
BspFNI CGCG 6 cut(s) 180, 323, 325, 366, 704, 863
BspLI GGNNCC 5 cut(s) 6, 286, 637, 661, 1536
BspMI ACCTGC 2 cut(s) 401, 514
BspPI GGATC 1 cut(s) 571
BspT107I GGYRCC 4 cut(s) 4, 284, 635, 1534
BspTNI GGTCTC 1 cut(s) 1272
BsrDI GCAATG 2 cut(s) 1023, 1192
BsrI ACTGG 4 cut(s) 285, 360, 1354, 1469
BssECI CCNNGG 5 cut(s) 492, 663, 1290, 1400, 1559
BssHII GCGCGC 1 cut(s) 861
BssMI GATC 2 cut(s) 563, 832
BssNI GRCGYC 2 cut(s) 369, 390
BssT1I CCWWGG 2 cut(s) 492, 1559
Bst2UI CCWGG 3 cut(s) 289, 1291, 1401
Bst4CI ACNGT 5 cut(s) 51, 554, 840, 1094, 1449
Bst6I CTCTTC 1 cut(s) 134
BstACI GRCGYC 2 cut(s) 369, 390
BstAPI GCANNNNNTGC 1 cut(s) 107
BstC8I GCNNGC 4 cut(s) 241, 467, 863, 1163
BstDEI CTNAG 2 cut(s) 479, 1245
BstF5I GGATG 4 cut(s) 992, 1336, 1521, 1548
BstFNI CGCG 6 cut(s) 180, 323, 325, 366, 704, 863
BstHHI GCGC 5 cut(s) 325, 516, 863, 865, 1161
BstKTI GATC 2 cut(s) 566, 835
BstMAI GTCTC 3 cut(s) 1113, 1272, 1478
BstMBI GATC 2 cut(s) 563, 832
BstMWI GCNNNNNNNGC 8 cut(s) 107, 163, 331, 442, 475, 520, 1183, 1429
BstNI CCWGG 3 cut(s) 289, 1291, 1401
BstNSI RCATGY 2 cut(s) 625, 1212
BstSCI CCNGG 5 cut(s) 169, 287, 752, 1289, 1399
BstSFI CTRYAG 2 cut(s) 550, 1077
BstUI CGCG 6 cut(s) 180, 323, 325, 366, 704, 863
BstV1I GCAGC 2 cut(s) 122, 392
BstV2I GAAGAC 1 cut(s) 1302
BsuRI GGCC 6 cut(s) 183, 243, 261, 436, 599, 662
BtgZI GCGATG 2 cut(s) 685, 704
BtsCI GGATG 4 cut(s) 992, 1336, 1521, 1548
BtsIMutI CAGTG 3 cut(s) 47, 1347, 1445
BveI ACCTGC 2 cut(s) 401, 514
Cac8I GCNNGC 4 cut(s) 241, 467, 863, 1163
CaiI CAGNNNCTG 1 cut(s) 294
CfoI GCGC 5 cut(s) 325, 516, 863, 865, 1161
Cfr13I GGNCC 6 cut(s) 173, 241, 260, 434, 526, 660
CseI GACGC 2 cut(s) 358, 1082
Csp6I GTAC 5 cut(s) 285, 423, 430, 1100, 1535
CviAII CATG 7 cut(s) 25, 126, 622, 640, 940, 1209, 1429
CviQI GTAC 5 cut(s) 285, 423, 430, 1100, 1535
DdeI CTNAG 2 cut(s) 479, 1245
DpnI GATC 2 cut(s) 565, 834
DpnII GATC 2 cut(s) 563, 832
EaeI YGGCCR 1 cut(s) 597
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
EciI GGCGGA 2 cut(s) 307, 689
Ecl136II GAGCTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 492, 1559
Eco24I GRGCYC 1 cut(s) 801
Eco31I GGTCTC 1 cut(s) 1272
Eco32I GATATC 1 cut(s) 1270
Eco47I GGWCC 2 cut(s) 173, 526
Eco53kI GAGCTC 1 cut(s) 799
Eco57I CTGAAG 1 cut(s) 158
EcoICRI GAGCTC 1 cut(s) 799
EcoRI GAATTC 1 cut(s) 17
EcoRII CCWGG 3 cut(s) 287, 1289, 1399
EcoRV GATATC 1 cut(s) 1270
EcoT14I CCWWGG 2 cut(s) 492, 1559
EcoT22I ATGCAT 2 cut(s) 1214, 1434
EcoT38I GRGCYC 1 cut(s) 801
ErhI CCWWGG 2 cut(s) 492, 1559
Esp3I CGTCTC 1 cut(s) 1478
FaeI CATG 7 cut(s) 28, 129, 625, 643, 943, 1212, 1432
FalI AAGNNNNNCTT 2 cut(s) 866, 898
FaqI GGGAC 2 cut(s) 401, 1417
FatI CATG 7 cut(s) 24, 125, 621, 639, 939, 1208, 1428
FauI CCCGC 3 cut(s) 195, 232, 398
FbaI TGATCA 1 cut(s) 832
FblI GTMKAC 1 cut(s) 696
Fnu4HI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
FokI GGATG 4 cut(s) 979, 1343, 1528, 1535
FriOI GRGCYC 1 cut(s) 801
Fsp4HI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
GlaI GCGC 5 cut(s) 324, 515, 862, 864, 1160
GluI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
GsaI CCCAGC 3 cut(s) 387, 660, 1172
GsuI CTGGAG 2 cut(s) 343, 665
HaeIII GGCC 6 cut(s) 183, 243, 261, 436, 599, 662
HapII CCGG 3 cut(s) 171, 437, 754
HgaI GACGC 2 cut(s) 358, 1082
HhaI GCGC 5 cut(s) 325, 516, 863, 865, 1161
Hin1I GRCGYC 2 cut(s) 369, 390
Hin1II CATG 7 cut(s) 28, 129, 625, 643, 943, 1212, 1432
Hin6I GCGC 5 cut(s) 323, 514, 861, 863, 1159
HinP1I GCGC 5 cut(s) 323, 514, 861, 863, 1159
HincII GTYRAC 3 cut(s) 214, 574, 697
HindII GTYRAC 3 cut(s) 214, 574, 697
HinfI GANTC 6 cut(s) 29, 150, 497, 1106, 1496, 1571
HpaII CCGG 3 cut(s) 171, 437, 754
HphI GGTGA 4 cut(s) 497, 593, 928, 1531
Hpy166II GTNNAC 6 cut(s) 90, 176, 214, 505, 574, 697
Hpy188I TCNGA 7 cut(s) 58, 278, 530, 563, 733, 1504, 1576
Hpy188III TCNNGA 3 cut(s) 472, 883, 1316
Hpy8I GTNNAC 6 cut(s) 90, 176, 214, 505, 574, 697
Hpy99I CGWCG 1 cut(s) 395
HpyAV CCTTC 6 cut(s) 324, 781, 905, 1293, 1483, 1525
HpyCH4III ACNGT 5 cut(s) 51, 554, 840, 1094, 1449
HpyCH4IV ACGT 2 cut(s) 353, 390
HpyCH4V TGCA 9 cut(s) 110, 380, 766, 1016, 1165, 1212, 1432, 1442, 1453
HpyF10VI GCNNNNNNNGC 8 cut(s) 107, 163, 331, 442, 475, 520, 1183, 1429
HpyF3I CTNAG 2 cut(s) 479, 1245
HpySE526I ACGT 2 cut(s) 353, 390
Hsp92I GRCGYC 2 cut(s) 369, 390
Hsp92II CATG 7 cut(s) 28, 129, 625, 643, 943, 1212, 1432
HspAI GCGC 5 cut(s) 323, 514, 861, 863, 1159
KpnI GGTACC 2 cut(s) 288, 1538
Ksp22I TGATCA 1 cut(s) 832
Kzo9I GATC 2 cut(s) 563, 832
LmnI GCTCC 5 cut(s) 228, 279, 733, 796, 1191
Lsp1109I GCAGC 2 cut(s) 122, 392
LweI GCATC 3 cut(s) 465, 910, 1451
MaeII ACGT 2 cut(s) 353, 390
MaeIII GTNAC 3 cut(s) 542, 986, 1355
MalI GATC 2 cut(s) 565, 834
MboI GATC 2 cut(s) 563, 832
MboII GAAGA 6 cut(s) 13, 151, 194, 1307, 1491, 1540
MfeI CAATTG 2 cut(s) 373, 1005
MhlI GDGCHC 3 cut(s) 336, 471, 801
MlsI TGGCCA 1 cut(s) 599
MluCI AATT 7 cut(s) 17, 34, 102, 114, 373, 1005, 1067
MluNI TGGCCA 1 cut(s) 599
MlyI GAGTC 2 cut(s) 491, 1115
MmeI TCCRAC 5 cut(s) 36, 301, 541, 1023, 1063
Mox20I TGGCCA 1 cut(s) 599
Mph1103I ATGCAT 2 cut(s) 1214, 1434
MscI TGGCCA 1 cut(s) 599
MseI TTAA 2 cut(s) 1257, 1311
MslI CAYNNNNRTG 2 cut(s) 620, 704
Msp20I TGGCCA 1 cut(s) 599
MspA1I CMGCKG 2 cut(s) 190, 383
MspI CCGG 3 cut(s) 171, 437, 754
MspR9I CCNGG 5 cut(s) 171, 289, 754, 1291, 1401
MunI CAATTG 2 cut(s) 373, 1005
Mva1269I GAATGC 1 cut(s) 1453
MvaI CCWGG 3 cut(s) 289, 1291, 1401
MvnI CGCG 6 cut(s) 180, 323, 325, 366, 704, 863
MwoI GCNNNNNNNGC 8 cut(s) 107, 163, 331, 442, 475, 520, 1183, 1429
NciI CCSGG 2 cut(s) 171, 754
NdeII GATC 2 cut(s) 563, 832
NlaIII CATG 7 cut(s) 28, 129, 625, 643, 943, 1212, 1432
NlaIV GGNNCC 5 cut(s) 6, 286, 637, 661, 1536
NmeAIII GCCGAG 1 cut(s) 688
NmuCI GTSAC 1 cut(s) 986
NsiI ATGCAT 2 cut(s) 1214, 1434
NspI RCATGY 2 cut(s) 625, 1212
PauI GCGCGC 1 cut(s) 861
PciI ACATGT 1 cut(s) 621
PcsI WCGNNNNNNNCGW 1 cut(s) 567
PctI GAATGC 1 cut(s) 1453
PfeI GAWTC 4 cut(s) 29, 150, 1496, 1571
Pfl23II CGTACG 1 cut(s) 429
PkrI GCNGC 6 cut(s) 112, 159, 182, 322, 368, 382
PleI GAGTC 2 cut(s) 491, 1114
PpsI GAGTC 2 cut(s) 491, 1114
PscI ACATGT 1 cut(s) 621
Psp124BI GAGCTC 1 cut(s) 801
Psp6I CCWGG 3 cut(s) 287, 1289, 1399
PspFI CCCAGC 3 cut(s) 383, 656, 1168
PspGI CCWGG 3 cut(s) 287, 1289, 1399
PspLI CGTACG 1 cut(s) 429
PspN4I GGNNCC 5 cut(s) 6, 286, 637, 661, 1536
PspPI GGNCC 6 cut(s) 173, 241, 260, 434, 526, 660
PstNI CAGNNNCTG 1 cut(s) 294
PteI GCGCGC 1 cut(s) 861
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 5 cut(s) 286, 424, 431, 1101, 1536
RsaNI GTAC 5 cut(s) 285, 423, 430, 1100, 1535
RseI CAYNNNNRTG 2 cut(s) 620, 704
SacI GAGCTC 1 cut(s) 801
SalI GTCGAC 1 cut(s) 695
SaqAI TTAA 2 cut(s) 1257, 1311
SatI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
Sau3AI GATC 2 cut(s) 563, 832
Sau96I GGNCC 6 cut(s) 173, 241, 260, 434, 526, 660
SchI GAGTC 2 cut(s) 491, 1115
ScrFI CCNGG 5 cut(s) 171, 289, 754, 1291, 1401
SduI GDGCHC 3 cut(s) 336, 471, 801
SfaNI GCATC 3 cut(s) 465, 910, 1451
SfcI CTRYAG 2 cut(s) 550, 1077
SinI GGWCC 2 cut(s) 173, 526
SmiMI CAYNNNNRTG 2 cut(s) 620, 704
SmlI CTYRAG 3 cut(s) 335, 470, 800
SmoI CTYRAG 3 cut(s) 335, 470, 800
Sse9I AATT 7 cut(s) 17, 34, 102, 114, 373, 1005, 1067
SspI AATATT 1 cut(s) 727
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 5 cut(s) 169, 287, 752, 1289, 1399
StyI CCWWGG 2 cut(s) 492, 1559
TaaI ACNGT 5 cut(s) 51, 554, 840, 1094, 1449
TaiI ACGT 2 cut(s) 356, 393
TaqI TCGA 1 cut(s) 696
TasI AATT 7 cut(s) 17, 34, 102, 114, 373, 1005, 1067
TauI GCSGC 4 cut(s) 160, 183, 323, 369
TfiI GAWTC 4 cut(s) 29, 150, 1496, 1571
Tru1I TTAA 2 cut(s) 1257, 1311
Tru9I TTAA 2 cut(s) 1257, 1311
TscAI CASTG 3 cut(s) 54, 1354, 1452
TseFI GTSAC 1 cut(s) 986
TseI GCWGC 2 cut(s) 110, 380
Tsp45I GTSAC 1 cut(s) 986
TspDTI ATGAA 7 cut(s) 13, 30, 800, 924, 1046, 1160, 1541
TspGWI ACGGA 2 cut(s) 199, 732
TspRI CASTG 3 cut(s) 54, 1354, 1452
VpaK11BI GGWCC 2 cut(s) 173, 526
XapI RAATTY 1 cut(s) 17
XceI RCATGY 2 cut(s) 625, 1212
XmiI GTMKAC 1 cut(s) 696
ZraI GACGTC 1 cut(s) 391
Zsp2I ATGCAT 2 cut(s) 1214, 1434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.