Rmu_sc0011511.1_g000002

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011511.1
OG0000153
Physical Location & Seq
Forward (+)
18682 .. 20275
1594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011511.1_g000002.1.cds

Sequence Viewer

Length: 1374 bp
atggctcctgaggtgtgtagtctagtcgatcatcattttgtgctcgaggatggccttaaaaaggagtttagaggcaattatgaaacttccagagatgtcagtcttgagcggatttccaggctactgattgagaggggggattatccggcagttcccataaactttgagtattcctgtgatttagttacggggtggccacaatgggttgaccatgagctaaaagatgaggccacgagaatcagactttcagaggctgctgttctttctcctgtattcatctctgctggttgtgatatcaacatggatgtggagtctcttcgtcatgtagttcgaagatggaatcctcacatgcatacctttgtttgcgagtggggagagtttacccctactttggaggacgtcttgaacattatgaggcttcccattaccggttcagtcaacccccttggctttgattttgactcagagaagttgcaggttcttgtagaaggggcctccagtgtcaaaggaagtaaaggctttaattctggttgccgtctggaagcaatgctatctctgtggctgaagaaatttgtcttcattgagttctcttatgagtatgttgaagagcgcctgtttcccttggcaattgcaatagcagccggcagtagatttcctttaggaccaatgtttcttggtcacgtctatcgtctgcttgactgtatcgttgttgacgagttggagagcgttggtcggtgtggagttactacattggtttctaccacttttctgcaagtatttatctgggagcggttcacaggactaaaggtagagcccttgaccatgagtctctctctagaattgtacaacaacgacaaggaaggcagcaagcaagcacagactgaatatttaccgccggtacttcctctgctatgtcgttggttcaaaaggagacaagataagactgtgtttaccccgagcatgctagatgatgataaggaagacctggatattttccctgttgtttattctcctgacagagtgatgcggcaacttggttgccttcaggatgttccctcacctccacctcgctctcttaactctaagatcacaagcttttctcatatagagcgtagatgtgtacttgacttctctggcagaattgcggacttcccatctcagttgccagggaatgccgcaaatgctaacgcttcccctgcttatagttgttattggaggggggtgttgtgcaggttcaggctttttgtggaagccggtagtccccagctagagttgggacctattaccagcagtaggttggctagcctcagggctgtactgacttatgctgaaaagcacaatctcacatatactgaagtgtacggtggattttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

457

Amino Acids

51.8

Weight (kDa)

5.37

Isoelectric Point (pI)

49.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 402
Acc36I ACCTGC 2 cut(s) 466, 1221
AccBSI CCGCTC 2 cut(s) 109, 790
AciI CCGC 6 cut(s) 109, 790, 893, 1027, 1145, 1176
AcoI YGGCCR 1 cut(s) 194
AcsI RAATTY 1 cut(s) 569
AcuI CTGAAG 3 cut(s) 584, 1028, 1374
AcyI GRCGYC 1 cut(s) 399
AfaI GTAC 5 cut(s) 845, 900, 1122, 1317, 1361
AfiI CCNNNNNNNGG 4 cut(s) 61, 391, 428, 1293
AgeI ACCGGT 1 cut(s) 428
AgsI TTSAA 3 cut(s) 406, 605, 925
AhdI GACNNNNNGTC 1 cut(s) 825
AjiI CACGTC 1 cut(s) 682
AjnI CCWGG 3 cut(s) 116, 984, 1165
AluBI AGCT 3 cut(s) 217, 1095, 1267
AluI AGCT 3 cut(s) 217, 1095, 1267
Alw21I GWGCWC 1 cut(s) 45
Alw26I GTCTC 3 cut(s) 318, 833, 925
AlwNI CAGNNNCTG 1 cut(s) 254
Ama87I CYCGRG 2 cut(s) 44, 955
AoxI GGCC 4 cut(s) 52, 194, 228, 492
ApeKI GCWGC 3 cut(s) 254, 638, 864
ApoI RAATTY 1 cut(s) 569
AsiGI ACCGGT 1 cut(s) 428
AspLEI GCGC 1 cut(s) 612
AspS9I GGNCC 3 cut(s) 492, 662, 1277
AsuHPI GGTGA 1 cut(s) 1050
AsuII TTCGAA 1 cut(s) 331
AsuNHI GCTAGC 1 cut(s) 1301
AvaI CYCGRG 2 cut(s) 44, 955
AvaII GGWCC 2 cut(s) 662, 1277
AxyI CCTNAGG 2 cut(s) 9, 1307
BalI TGGCCA 1 cut(s) 196
BanII GRGCYC 1 cut(s) 816
BauI CACGAG 1 cut(s) 232
BbsI GAAGAC 2 cut(s) 568, 987
Bbv12I GWGCWC 1 cut(s) 45
BbvI GCAGC 3 cut(s) 241, 650, 876
BccI CCATC 3 cut(s) 44, 330, 1162
BceAI ACGGC 1 cut(s) 519
BciT130I CCWGG 3 cut(s) 118, 986, 1167
BcoDI GTCTC 3 cut(s) 318, 833, 925
BfaI CTAG 5 cut(s) 23, 836, 965, 1268, 1302
BfoI RGCGCY 1 cut(s) 613
BfuAI ACCTGC 2 cut(s) 466, 1221
BisI GCNGC 5 cut(s) 255, 639, 865, 1028, 1176
BlsI GCNGC 5 cut(s) 256, 640, 866, 1029, 1177
Bme1390I CCNGG 3 cut(s) 118, 986, 1167
Bme18I GGWCC 2 cut(s) 662, 1277
BmeRI GACNNNNNGTC 1 cut(s) 825
BmeT110I CYCGRG 2 cut(s) 44, 955
BmgBI CACGTC 1 cut(s) 682
BmgT120I GGNCC 3 cut(s) 492, 662, 1277
BmiI GGNNCC 3 cut(s) 6, 493, 1278
BmrFI CCNGG 3 cut(s) 118, 986, 1167
BmsI GCATC 1 cut(s) 1014
BmtI GCTAGC 1 cut(s) 1305
BpiI GAAGAC 2 cut(s) 568, 987
BplI GAGNNNNNCTC 2 cut(s) 817, 849
BpmI CTGGAG 1 cut(s) 481
Bpu14I TTCGAA 1 cut(s) 331
BpuEI CTTGAG 1 cut(s) 125
BsaHI GRCGYC 1 cut(s) 399
BsaJI CCNNGG 3 cut(s) 445, 621, 1166
BsaWI WCCGGW 1 cut(s) 428
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 391, 428, 1293
Bse118I RCCGGY 4 cut(s) 428, 641, 895, 1253
Bse1I ACTGG 1 cut(s) 498
Bse21I CCTNAGG 2 cut(s) 9, 1307
Bse3DI GCAATG 1 cut(s) 552
BseBI CCWGG 3 cut(s) 118, 986, 1167
BseDI CCNNGG 3 cut(s) 445, 621, 1166
BseGI GGATG 3 cut(s) 55, 310, 1054
BseLI CCNNNNNNNGG 4 cut(s) 61, 391, 428, 1293
BseMI GCAATG 1 cut(s) 552
BseMII CTCAG 3 cut(s) 477, 1172, 1321
BseNI ACTGG 1 cut(s) 498
BseXI GCAGC 3 cut(s) 241, 650, 876
BseYI CCCAGC 1 cut(s) 1263
BsgI GTGCAG 1 cut(s) 1249
BshFI GGCC 4 cut(s) 54, 196, 230, 494
BshTI ACCGGT 1 cut(s) 428
BsiHKAI GWGCWC 1 cut(s) 45
BsiHKCI CYCGRG 2 cut(s) 44, 955
BsiSI CCGG 5 cut(s) 146, 429, 642, 896, 1254
BslFI GGGAC 2 cut(s) 1245, 1290
BslI CCNNNNNNNGG 4 cut(s) 61, 391, 428, 1293
BsmAI GTCTC 3 cut(s) 318, 833, 925
BsmFI GGGAC 2 cut(s) 1245, 1290
BsmI GAATGC 1 cut(s) 1177
BsnI GGCC 4 cut(s) 54, 196, 230, 494
BsoBI CYCGRG 2 cut(s) 44, 955
Bsp119I TTCGAA 1 cut(s) 331
Bsp1286I GDGCHC 2 cut(s) 45, 816
Bsp1407I TGTACA 1 cut(s) 843
Bsp143I GATC 2 cut(s) 28, 1086
BspACI CCGC 6 cut(s) 109, 790, 893, 1027, 1145, 1176
BspANI GGCC 4 cut(s) 54, 196, 230, 494
BspCNI CTCAG 3 cut(s) 476, 1171, 1320
BspLI GGNNCC 3 cut(s) 6, 493, 1278
BspMI ACCTGC 2 cut(s) 466, 1221
BspOI GCTAGC 1 cut(s) 1305
BspQI GCTCTTC 1 cut(s) 600
BspT104I TTCGAA 1 cut(s) 331
BsrBI CCGCTC 2 cut(s) 109, 790
BsrDI GCAATG 1 cut(s) 552
BsrFI RCCGGY 4 cut(s) 428, 641, 895, 1253
BsrGI TGTACA 1 cut(s) 843
BsrI ACTGG 1 cut(s) 498
BssAI RCCGGY 4 cut(s) 428, 641, 895, 1253
BssECI CCNNGG 3 cut(s) 445, 621, 1166
BssMI GATC 2 cut(s) 28, 1086
BssNI GRCGYC 1 cut(s) 399
BssSI CACGAG 1 cut(s) 232
BssT1I CCWWGG 2 cut(s) 445, 621
Bst2BI CACGAG 1 cut(s) 232
Bst2UI CCWGG 3 cut(s) 118, 986, 1167
Bst4CI ACNGT 3 cut(s) 701, 946, 1364
Bst6I CTCTTC 2 cut(s) 321, 600
BstACI GRCGYC 1 cut(s) 399
BstAUI TGTACA 1 cut(s) 843
BstBI TTCGAA 1 cut(s) 331
BstC8I GCNNGC 5 cut(s) 643, 869, 873, 962, 1303
BstDEI CTNAG 5 cut(s) 9, 463, 1083, 1158, 1307
BstENI CCTNNNNNAGG 1 cut(s) 59
BstF5I GGATG 3 cut(s) 55, 310, 1054
BstH2I RGCGCY 1 cut(s) 613
BstHHI GCGC 1 cut(s) 612
BstKTI GATC 2 cut(s) 31, 1089
BstMAI GTCTC 3 cut(s) 318, 833, 925
BstMBI GATC 2 cut(s) 28, 1086
BstMWI GCNNNNNNNGC 3 cut(s) 638, 1181, 1196
BstNI CCWGG 3 cut(s) 118, 986, 1167
BstNSI RCATGY 2 cut(s) 352, 964
BstSCI CCNGG 3 cut(s) 116, 984, 1165
BstV1I GCAGC 3 cut(s) 241, 650, 876
BstV2I GAAGAC 2 cut(s) 568, 987
Bsu36I CCTNAGG 2 cut(s) 9, 1307
BsuRI GGCC 4 cut(s) 54, 196, 230, 494
BtrI CACGTC 1 cut(s) 682
BtsCI GGATG 3 cut(s) 55, 310, 1054
BtsIMutI CAGTG 1 cut(s) 505
BveI ACCTGC 2 cut(s) 466, 1221
Cac8I GCNNGC 5 cut(s) 643, 869, 873, 962, 1303
CaiI CAGNNNCTG 1 cut(s) 254
CfoI GCGC 1 cut(s) 612
Cfr10I RCCGGY 4 cut(s) 428, 641, 895, 1253
Cfr13I GGNCC 3 cut(s) 492, 662, 1277
Csp6I GTAC 5 cut(s) 844, 899, 1121, 1316, 1360
CspAI ACCGGT 1 cut(s) 428
CviAII CATG 6 cut(s) 212, 301, 323, 349, 823, 961
CviQI GTAC 5 cut(s) 844, 899, 1121, 1316, 1360
DdeI CTNAG 5 cut(s) 9, 463, 1083, 1158, 1307
DpnI GATC 2 cut(s) 30, 1088
DpnII GATC 2 cut(s) 28, 1086
DriI GACNNNNNGTC 1 cut(s) 825
EaeI YGGCCR 1 cut(s) 194
Eam1104I CTCTTC 2 cut(s) 321, 600
Eam1105I GACNNNNNGTC 1 cut(s) 825
EarI CTCTTC 2 cut(s) 321, 600
Eco130I CCWWGG 2 cut(s) 445, 621
Eco24I GRGCYC 1 cut(s) 816
Eco32I GATATC 1 cut(s) 295
Eco47I GGWCC 2 cut(s) 662, 1277
Eco57I CTGAAG 3 cut(s) 584, 1028, 1374
Eco81I CCTNAGG 2 cut(s) 9, 1307
Eco88I CYCGRG 2 cut(s) 44, 955
EcoNI CCTNNNNNAGG 1 cut(s) 59
EcoO109I RGGNCCY 2 cut(s) 492, 1277
EcoRII CCWGG 3 cut(s) 116, 984, 1165
EcoRV GATATC 1 cut(s) 295
EcoT14I CCWWGG 2 cut(s) 445, 621
EcoT22I ATGCAT 1 cut(s) 354
EcoT38I GRGCYC 1 cut(s) 816
ErhI CCWWGG 2 cut(s) 445, 621
FaeI CATG 6 cut(s) 215, 304, 326, 352, 826, 964
FaqI GGGAC 2 cut(s) 1245, 1290
FatI CATG 6 cut(s) 211, 300, 322, 348, 822, 960
Fnu4HI GCNGC 5 cut(s) 255, 639, 865, 1028, 1176
FokI GGATG 3 cut(s) 62, 317, 1061
FriOI GRGCYC 1 cut(s) 816
Fsp4HI GCNGC 5 cut(s) 255, 639, 865, 1028, 1176
FspBI CTAG 5 cut(s) 23, 836, 965, 1268, 1302
GlaI GCGC 1 cut(s) 611
GluI GCNGC 5 cut(s) 255, 639, 865, 1028, 1176
GsaI CCCAGC 1 cut(s) 1267
GsuI CTGGAG 1 cut(s) 481
HaeII RGCGCY 1 cut(s) 613
HaeIII GGCC 4 cut(s) 54, 196, 230, 494
HapII CCGG 5 cut(s) 146, 429, 642, 896, 1254
HhaI GCGC 1 cut(s) 612
Hin1I GRCGYC 1 cut(s) 399
Hin1II CATG 6 cut(s) 215, 304, 326, 352, 826, 964
Hin6I GCGC 1 cut(s) 610
HinP1I GCGC 1 cut(s) 610
HincII GTYRAC 3 cut(s) 208, 439, 712
HindII GTYRAC 3 cut(s) 208, 439, 712
HindIII AAGCTT 1 cut(s) 1093
HinfI GANTC 5 cut(s) 237, 311, 340, 461, 826
HpaII CCGG 5 cut(s) 146, 429, 642, 896, 1254
HphI GGTGA 1 cut(s) 1050
Hpy166II GTNNAC 8 cut(s) 208, 381, 439, 712, 795, 951, 1121, 1360
Hpy188I TCNGA 3 cut(s) 242, 250, 466
Hpy188III TCNNGA 8 cut(s) 8, 90, 104, 403, 539, 836, 1013, 1046
Hpy8I GTNNAC 8 cut(s) 208, 381, 439, 712, 795, 951, 1121, 1360
HpyAV CCTTC 3 cut(s) 482, 854, 1052
HpyCH4III ACNGT 3 cut(s) 701, 946, 1364
HpyCH4IV ACGT 2 cut(s) 399, 681
HpyCH4V TGCA 5 cut(s) 352, 475, 632, 772, 1230
HpyF10VI GCNNNNNNNGC 3 cut(s) 638, 1181, 1196
HpyF3I CTNAG 5 cut(s) 9, 463, 1083, 1158, 1307
HpySE526I ACGT 2 cut(s) 399, 681
Hsp92I GRCGYC 1 cut(s) 399
Hsp92II CATG 6 cut(s) 215, 304, 326, 352, 826, 964
HspAI GCGC 1 cut(s) 610
KroI GCCGGC 1 cut(s) 641
KroNI GCCGGC 1 cut(s) 643
Kzo9I GATC 2 cut(s) 28, 1086
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 2 cut(s) 10, 787
Lsp1109I GCAGC 3 cut(s) 241, 650, 876
LweI GCATC 1 cut(s) 1014
MaeI CTAG 5 cut(s) 23, 836, 965, 1268, 1302
MaeII ACGT 2 cut(s) 399, 681
MaeIII GTNAC 3 cut(s) 184, 677, 742
MalI GATC 2 cut(s) 30, 1088
MbiI CCGCTC 2 cut(s) 109, 790
MboI GATC 2 cut(s) 28, 1086
MboII GAAGA 6 cut(s) 308, 345, 568, 577, 617, 992
MfeI CAATTG 1 cut(s) 627
MhlI GDGCHC 2 cut(s) 45, 816
MlsI TGGCCA 1 cut(s) 196
MluCI AATT 6 cut(s) 76, 523, 569, 627, 839, 1140
MluNI TGGCCA 1 cut(s) 196
MlyI GAGTC 3 cut(s) 320, 455, 835
MmeI TCCRAC 1 cut(s) 699
Mox20I TGGCCA 1 cut(s) 196
Mph1103I ATGCAT 1 cut(s) 354
MroNI GCCGGC 1 cut(s) 641
MscI TGGCCA 1 cut(s) 196
MseI TTAA 3 cut(s) 57, 522, 1077
MslI CAYNNNNRTG 1 cut(s) 305
Msp20I TGGCCA 1 cut(s) 196
MspI CCGG 5 cut(s) 146, 429, 642, 896, 1254
MspR9I CCNGG 3 cut(s) 118, 986, 1167
MunI CAATTG 1 cut(s) 627
Mva1269I GAATGC 1 cut(s) 1177
MvaI CCWGG 3 cut(s) 118, 986, 1167
MwoI GCNNNNNNNGC 3 cut(s) 638, 1181, 1196
NaeI GCCGGC 1 cut(s) 643
NdeII GATC 2 cut(s) 28, 1086
NgoMIV GCCGGC 1 cut(s) 641
NheI GCTAGC 1 cut(s) 1301
NlaIII CATG 6 cut(s) 215, 304, 326, 352, 826, 964
NlaIV GGNNCC 3 cut(s) 6, 493, 1278
NmuCI GTSAC 1 cut(s) 677
NsiI ATGCAT 1 cut(s) 354
NspI RCATGY 2 cut(s) 352, 964
NspV TTCGAA 1 cut(s) 331
PaeI GCATGC 1 cut(s) 964
PaeR7I CTCGAG 1 cut(s) 44
PciSI GCTCTTC 1 cut(s) 600
PcsI WCGNNNNNNNCGW 1 cut(s) 711
PctI GAATGC 1 cut(s) 1177
PdiI GCCGGC 1 cut(s) 643
PfeI GAWTC 2 cut(s) 237, 340
PinAI ACCGGT 1 cut(s) 428
PkrI GCNGC 5 cut(s) 256, 640, 866, 1029, 1177
PleI GAGTC 3 cut(s) 319, 455, 834
PpsI GAGTC 3 cut(s) 319, 455, 834
PpuMI RGGWCCY 1 cut(s) 1277
Psp5II RGGWCCY 1 cut(s) 1277
Psp6I CCWGG 3 cut(s) 116, 984, 1165
PspFI CCCAGC 1 cut(s) 1263
PspGI CCWGG 3 cut(s) 116, 984, 1165
PspN4I GGNNCC 3 cut(s) 6, 493, 1278
PspPI GGNCC 3 cut(s) 492, 662, 1277
PspPPI RGGWCCY 1 cut(s) 1277
PspXI VCTCGAGB 1 cut(s) 44
PstNI CAGNNNCTG 1 cut(s) 254
RsaI GTAC 5 cut(s) 845, 900, 1122, 1317, 1361
RsaNI GTAC 5 cut(s) 844, 899, 1121, 1316, 1360
RseI CAYNNNNRTG 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 3 cut(s) 57, 522, 1077
SatI GCNGC 5 cut(s) 255, 639, 865, 1028, 1176
Sau3AI GATC 2 cut(s) 28, 1086
Sau96I GGNCC 3 cut(s) 492, 662, 1277
SchI GAGTC 3 cut(s) 320, 455, 835
ScrFI CCNGG 3 cut(s) 118, 986, 1167
SduI GDGCHC 2 cut(s) 45, 816
SfaNI GCATC 1 cut(s) 1014
Sfr274I CTCGAG 1 cut(s) 44
SfuI TTCGAA 1 cut(s) 331
SinI GGWCC 2 cut(s) 662, 1277
SlaI CTCGAG 1 cut(s) 44
SmiMI CAYNNNNRTG 1 cut(s) 305
SmlI CTYRAG 2 cut(s) 44, 104
SmoI CTYRAG 2 cut(s) 44, 104
SphI GCATGC 1 cut(s) 964
Sse9I AATT 6 cut(s) 76, 523, 569, 627, 839, 1140
SsiI CCGC 6 cut(s) 109, 790, 893, 1027, 1145, 1176
SspI AATATT 1 cut(s) 887
SspMI CTAG 5 cut(s) 23, 836, 965, 1268, 1302
StyD4I CCNGG 3 cut(s) 116, 984, 1165
StyI CCWWGG 2 cut(s) 445, 621
TaaI ACNGT 3 cut(s) 701, 946, 1364
TaiI ACGT 2 cut(s) 402, 684
TaqI TCGA 3 cut(s) 27, 45, 331
TasI AATT 6 cut(s) 76, 523, 569, 627, 839, 1140
TatI WGTACW 3 cut(s) 843, 1120, 1315
TauI GCSGC 2 cut(s) 1030, 1178
TfiI GAWTC 2 cut(s) 237, 340
Tru1I TTAA 3 cut(s) 57, 522, 1077
Tru9I TTAA 3 cut(s) 57, 522, 1077
TscAI CASTG 1 cut(s) 505
TseFI GTSAC 1 cut(s) 677
TseI GCWGC 3 cut(s) 254, 638, 864
Tsp45I GTSAC 1 cut(s) 677
TspDTI ATGAA 3 cut(s) 96, 265, 568
TspRI CASTG 1 cut(s) 505
VpaK11BI GGWCC 2 cut(s) 662, 1277
XagI CCTNNNNNAGG 1 cut(s) 59
XapI RAATTY 1 cut(s) 569
XbaI TCTAGA 1 cut(s) 835
XceI RCATGY 2 cut(s) 352, 964
XcmI CCANNNNNNNNNTGG 1 cut(s) 1294
XhoI CTCGAG 1 cut(s) 44
XspI CTAG 5 cut(s) 23, 836, 965, 1268, 1302
ZraI GACGTC 1 cut(s) 400
Zsp2I ATGCAT 1 cut(s) 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.