Rmu_sc0005914.1_g000004

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005914.1
OG0000153
Physical Location & Seq
Reverse (-)
12066 .. 13890
1825 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005914.1_g000004.1.cds

Sequence Viewer

Length: 1374 bp
ctggaagatggtttcattcctgcttccaccgtgggggactctgaaggtagctcagaggaggcatctcatgagttttatgggagctttgtttctcccaagtttatatccaggttgcttattgagctgggagagtaccctgcagtgcctatatgtttccggtatcctgcgaggacccctgcgggttggcctgaatgggtcagctttgaggtacagcaggaagagcttgaagaggcccttattagagctggagtgaagatttcactgtttatttccggcttttgtgaggtttacaaagataacatttgccttcaccatgtggtgcgaagatggagtcctgaaactcacacgttcgtctgctcttggggggaatttactccttctctggaagatattctgaaaaagggtgcttatgattctaaagatgtgttccgtttttgttactgggtgagacacttttggggctcgacgaacggaggcaagtttaggcatggtgcaggctttgaatctggctgcttggtggaggccatgtttgcttattggttgagcagattcatctttgcggattttccctatgagaacgtgcagcagcgagtcttcccattggccattatgctagcaaccggtacttgtttccctcttgctcctctctcccttggtcatctatataggaagcttgatcagatttcaaaggatgacaaagaaggtgcggagggtaattcatcaccgttcttggaatcggttgagttgcttcttgccactagtgcgcagtccataatagcatgtggcgatttctttaaccctgtgatggagaagtattcccctcatagagttaagaggcagtttggcatcgaccaggatgtgccatcgcatctatcttacggtggacatcttagggactgcatcatgggtttcactcggatagatggtatttcttgtaggcggtgccagttcaggaggtttattcagactggtggaactaggttgtgtccgaaagctaatagtgagaacaagagactacttcgcatctctcctatagtagtcaaaagtgcctttggtgttagagtgatactgctatcaagtttagctgatggaaaatggaagaaaaggaaagccgcttcttgctcaagacctagtggagctactaagcaaaagattacagtggatgcctcacttgctgtccgcaggctgagctctcgcgttgctaacatgagtttttctaaacctaaaccgtcgtctaagggcgcggctcatgttgatcttagtgacgcgccaagtgacgacatcgaaggtagcccccttagtgataatgtcagtacacatgaggagaatgaatctgatacttatgagggagagacctgcgatgacagtagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

457

Amino Acids

50.96

Weight (kDa)

6.35

Isoelectric Point (pI)

50.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 765
Acc36I ACCTGC 1 cut(s) 1364
AccB1I GGYRCC 1 cut(s) 942
AccII CGCG 3 cut(s) 1197, 1244, 1268
AciI CCGC 7 cut(s) 179, 560, 707, 940, 1113, 1180, 1244
AcoI YGGCCR 1 cut(s) 603
AcsI RAATTY 1 cut(s) 368
AcuI CTGAAG 1 cut(s) 63
AdeI CACNNNGTG 1 cut(s) 316
AfaI GTAC 4 cut(s) 134, 210, 625, 1315
AfiI CCNNNNNNNGG 2 cut(s) 33, 805
AflIII ACRYGT 1 cut(s) 345
AgeI ACCGGT 1 cut(s) 620
AgsI TTSAA 3 cut(s) 227, 503, 687
AhlI ACTAGT 1 cut(s) 758
AjnI CCWGG 2 cut(s) 107, 852
Alw21I GWGCWC 1 cut(s) 1193
Alw26I GTCTC 3 cut(s) 442, 1006, 1346
AoxI GGCC 4 cut(s) 185, 231, 522, 603
ApeKI GCWGC 3 cut(s) 510, 583, 586
ApoI RAATTY 1 cut(s) 368
ArsI GACNNNNNNTTYG 2 cut(s) 316, 348
AsiGI ACCGGT 1 cut(s) 620
Asp700I GAANNNNTTC 1 cut(s) 390
AspLEI GCGC 3 cut(s) 766, 1244, 1270
AspS9I GGNCC 2 cut(s) 171, 232
AsuHPI GGTGA 3 cut(s) 302, 457, 714
AsuNHI GCTAGC 1 cut(s) 613
AvaII GGWCC 1 cut(s) 171
BalI TGGCCA 1 cut(s) 605
BanI GGYRCC 1 cut(s) 942
BanII GRGCYC 2 cut(s) 464, 1193
BbsI GAAGAC 1 cut(s) 586
Bbv12I GWGCWC 1 cut(s) 1193
BbvI GCAGC 3 cut(s) 497, 595, 598
BccI CCATC 6 cut(s) 2, 321, 799, 871, 917, 1082
BciT130I CCWGG 2 cut(s) 109, 854
BciVI GTATCC 1 cut(s) 171
BclI TGATCA 1 cut(s) 676
BcoDI GTCTC 3 cut(s) 442, 1006, 1346
BcuI ACTAGT 1 cut(s) 758
BfaI CTAG 4 cut(s) 614, 759, 978, 1131
BfmI CTRYAG 2 cut(s) 138, 1032
BfuAI ACCTGC 1 cut(s) 1364
BfuI GTATCC 1 cut(s) 171
BisI GCNGC 5 cut(s) 511, 584, 587, 1113, 1245
BlpI GCTNAGC 1 cut(s) 1187
BlsI GCNGC 5 cut(s) 512, 585, 588, 1114, 1246
Bme1390I CCNGG 2 cut(s) 109, 854
Bme18I GGWCC 1 cut(s) 171
BmgT120I GGNCC 2 cut(s) 171, 232
BmiI GGNNCC 2 cut(s) 173, 944
BmrFI CCNGG 2 cut(s) 109, 854
BmrI ACTGGG 1 cut(s) 451
BmsI GCATC 6 cut(s) 71, 855, 877, 909, 1032, 1153
BmtI GCTAGC 1 cut(s) 617
BmuI ACTGGG 1 cut(s) 451
BpiI GAAGAC 1 cut(s) 586
BpmI CTGGAG 1 cut(s) 267
Bpu1102I GCTNAGC 1 cut(s) 1187
BpuEI CTTGAG 1 cut(s) 1108
BsaI GGTCTC 1 cut(s) 1346
BsaJI CCNNGG 2 cut(s) 30, 652
BsaWI WCCGGW 2 cut(s) 156, 620
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 2 cut(s) 33, 805
Bse118I RCCGGY 1 cut(s) 620
Bse1I ACTGG 3 cut(s) 446, 946, 973
BseBI CCWGG 2 cut(s) 109, 854
BseDI CCNNGG 2 cut(s) 30, 652
BseGI GGATG 3 cut(s) 697, 862, 1168
BseLI CCNNNNNNNGG 2 cut(s) 33, 805
BseMII CTCAG 2 cut(s) 66, 1178
BseNI ACTGG 3 cut(s) 446, 946, 973
BseRI GAGGAG 3 cut(s) 71, 633, 1337
BseXI GCAGC 3 cut(s) 497, 595, 598
BseYI CCCAGC 1 cut(s) 124
BsgI GTGCAG 2 cut(s) 513, 602
Bsh1236I CGCG 3 cut(s) 1197, 1244, 1268
BshFI GGCC 4 cut(s) 187, 233, 524, 605
BshNI GGYRCC 1 cut(s) 942
BshTI ACCGGT 1 cut(s) 620
BsiHKAI GWGCWC 1 cut(s) 1193
BsiSI CCGG 3 cut(s) 157, 273, 621
BslFI GGGAC 2 cut(s) 50, 908
BslI CCNNNNNNNGG 2 cut(s) 33, 805
BsmAI GTCTC 3 cut(s) 442, 1006, 1346
BsmFI GGGAC 2 cut(s) 50, 908
BsnI GGCC 4 cut(s) 187, 233, 524, 605
Bso31I GGTCTC 1 cut(s) 1346
Bsp1286I GDGCHC 2 cut(s) 464, 1193
Bsp143I GATC 2 cut(s) 676, 1255
Bsp1720I GCTNAGC 1 cut(s) 1187
BspACI CCGC 7 cut(s) 179, 560, 707, 940, 1113, 1180, 1244
BspANI GGCC 4 cut(s) 187, 233, 524, 605
BspCNI CTCAG 2 cut(s) 65, 1179
BspFNI CGCG 3 cut(s) 1197, 1244, 1268
BspHI TCATGA 1 cut(s) 67
BspLI GGNNCC 2 cut(s) 173, 944
BspMAI CTGCAG 1 cut(s) 142
BspMI ACCTGC 1 cut(s) 1364
BspOI GCTAGC 1 cut(s) 617
BspQI GCTCTTC 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 942
BspTNI GGTCTC 1 cut(s) 1346
BsrFI RCCGGY 1 cut(s) 620
BsrI ACTGG 3 cut(s) 446, 946, 973
BssAI RCCGGY 1 cut(s) 620
BssECI CCNNGG 2 cut(s) 30, 652
BssMI GATC 2 cut(s) 676, 1255
BssT1I CCWWGG 1 cut(s) 652
Bst2UI CCWGG 2 cut(s) 109, 854
Bst4CI ACNGT 7 cut(s) 31, 264, 726, 881, 1159, 1230, 1367
Bst6I CTCTTC 2 cut(s) 213, 222
BstC8I GCNNGC 3 cut(s) 496, 615, 1184
BstDEI CTNAG 7 cut(s) 52, 890, 1143, 1187, 1236, 1259, 1298
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 3 cut(s) 697, 862, 1168
BstFNI CGCG 3 cut(s) 1197, 1244, 1268
BstHHI GCGC 3 cut(s) 766, 1244, 1270
BstKTI GATC 2 cut(s) 679, 1258
BstMAI GTCTC 3 cut(s) 442, 1006, 1346
BstMBI GATC 2 cut(s) 676, 1255
BstMWI GCNNNNNNNGC 6 cut(s) 121, 220, 530, 761, 1172, 1188
BstNI CCWGG 2 cut(s) 109, 854
BstNSI RCATGY 1 cut(s) 783
BstSCI CCNGG 2 cut(s) 107, 852
BstSFI CTRYAG 2 cut(s) 138, 1032
BstUI CGCG 3 cut(s) 1197, 1244, 1268
BstV1I GCAGC 3 cut(s) 497, 595, 598
BstV2I GAAGAC 1 cut(s) 586
BsuI GTATCC 1 cut(s) 171
BsuRI GGCC 4 cut(s) 187, 233, 524, 605
BtgI CCRYGG 1 cut(s) 30
BtgZI GCGATG 1 cut(s) 849
BtsCI GGATG 3 cut(s) 697, 862, 1168
BtsI GCAGTG 1 cut(s) 147
BtsIMutI CAGTG 3 cut(s) 147, 260, 1164
BveI ACCTGC 1 cut(s) 1364
Cac8I GCNNGC 3 cut(s) 496, 615, 1184
CciI TCATGA 1 cut(s) 67
CfoI GCGC 3 cut(s) 766, 1244, 1270
Cfr10I RCCGGY 1 cut(s) 620
Cfr13I GGNCC 2 cut(s) 171, 232
CseI GACGC 1 cut(s) 1274
Csp6I GTAC 4 cut(s) 133, 209, 624, 1314
CspAI ACCGGT 1 cut(s) 620
CviAII CATG 9 cut(s) 68, 314, 488, 526, 780, 904, 1207, 1250, 1319
CviQI GTAC 4 cut(s) 133, 209, 624, 1314
DdeI CTNAG 7 cut(s) 52, 890, 1143, 1187, 1236, 1259, 1298
DpnI GATC 2 cut(s) 678, 1257
DpnII GATC 2 cut(s) 676, 1255
DraIII CACNNNGTG 1 cut(s) 316
EaeI YGGCCR 1 cut(s) 603
Eam1104I CTCTTC 2 cut(s) 213, 222
EarI CTCTTC 2 cut(s) 213, 222
Ecl136II GAGCTC 1 cut(s) 1191
Eco130I CCWWGG 1 cut(s) 652
Eco24I GRGCYC 2 cut(s) 464, 1193
Eco31I GGTCTC 1 cut(s) 1346
Eco47I GGWCC 1 cut(s) 171
Eco53kI GAGCTC 1 cut(s) 1191
Eco57I CTGAAG 1 cut(s) 63
EcoICRI GAGCTC 1 cut(s) 1191
EcoO109I RGGNCCY 2 cut(s) 171, 232
EcoRII CCWGG 2 cut(s) 107, 852
EcoT14I CCWWGG 1 cut(s) 652
EcoT38I GRGCYC 2 cut(s) 464, 1193
ErhI CCWWGG 1 cut(s) 652
FaeI CATG 9 cut(s) 71, 317, 491, 529, 783, 907, 1210, 1253, 1322
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 2 cut(s) 50, 908
FatI CATG 9 cut(s) 67, 313, 487, 525, 779, 903, 1206, 1249, 1318
FauI CCCGC 1 cut(s) 172
FbaI TGATCA 1 cut(s) 676
Fnu4HI GCNGC 5 cut(s) 511, 584, 587, 1113, 1245
FokI GGATG 3 cut(s) 704, 869, 1175
FriOI GRGCYC 2 cut(s) 464, 1193
Fsp4HI GCNGC 5 cut(s) 511, 584, 587, 1113, 1245
FspBI CTAG 4 cut(s) 614, 759, 978, 1131
FspI TGCGCA 1 cut(s) 765
GlaI GCGC 3 cut(s) 765, 1243, 1269
GluI GCNGC 5 cut(s) 511, 584, 587, 1113, 1245
GsaI CCCAGC 1 cut(s) 128
GsuI CTGGAG 1 cut(s) 267
HaeIII GGCC 4 cut(s) 187, 233, 524, 605
HapII CCGG 3 cut(s) 157, 273, 621
HgaI GACGC 1 cut(s) 1274
HhaI GCGC 3 cut(s) 766, 1244, 1270
Hin1II CATG 9 cut(s) 71, 317, 491, 529, 783, 907, 1210, 1253, 1322
Hin6I GCGC 3 cut(s) 764, 1242, 1268
HinP1I GCGC 3 cut(s) 764, 1242, 1268
HindIII AAGCTT 1 cut(s) 671
HinfI GANTC 8 cut(s) 38, 331, 413, 503, 549, 591, 734, 1331
HpaII CCGG 3 cut(s) 157, 273, 621
HphI GGTGA 3 cut(s) 302, 457, 714
Hpy166II GTNNAC 3 cut(s) 289, 884, 1316
Hpy188I TCNGA 8 cut(s) 43, 55, 396, 681, 918, 966, 990, 1336
Hpy188III TCNNGA 5 cut(s) 68, 335, 383, 952, 1125
Hpy8I GTNNAC 3 cut(s) 289, 884, 1316
Hpy99I CGWCG 2 cut(s) 469, 1234
HpyAV CCTTC 5 cut(s) 38, 317, 387, 695, 1280
HpyCH4III ACNGT 7 cut(s) 31, 264, 726, 881, 1159, 1230, 1367
HpyCH4IV ACGT 2 cut(s) 347, 579
HpyCH4V TGCA 4 cut(s) 140, 494, 583, 900
HpyF10VI GCNNNNNNNGC 6 cut(s) 121, 220, 530, 761, 1172, 1188
HpyF3I CTNAG 7 cut(s) 52, 890, 1143, 1187, 1236, 1259, 1298
HpySE526I ACGT 2 cut(s) 347, 579
Hsp92II CATG 9 cut(s) 71, 317, 491, 529, 783, 907, 1210, 1253, 1322
HspAI GCGC 3 cut(s) 764, 1242, 1268
Ksp22I TGATCA 1 cut(s) 676
Kzo9I GATC 2 cut(s) 676, 1255
LguI GCTCTTC 1 cut(s) 213
LmnI GCTCC 3 cut(s) 81, 646, 1136
Lsp1109I GCAGC 3 cut(s) 497, 595, 598
LweI GCATC 6 cut(s) 71, 855, 877, 909, 1032, 1153
MaeI CTAG 4 cut(s) 614, 759, 978, 1131
MaeII ACGT 2 cut(s) 347, 579
MaeIII GTNAC 3 cut(s) 437, 1262, 1274
MalI GATC 2 cut(s) 678, 1257
MboI GATC 2 cut(s) 676, 1255
MboII GAAGA 8 cut(s) 17, 230, 239, 265, 336, 398, 586, 1111
MhlI GDGCHC 2 cut(s) 464, 1193
MlsI TGGCCA 1 cut(s) 605
MluCI AATT 2 cut(s) 368, 715
MluNI TGGCCA 1 cut(s) 605
MlyI GAGTC 3 cut(s) 32, 340, 600
Mox20I TGGCCA 1 cut(s) 605
MroXI GAANNNNTTC 1 cut(s) 390
MscI TGGCCA 1 cut(s) 605
MseI TTAA 2 cut(s) 795, 831
Msp20I TGGCCA 1 cut(s) 605
MspI CCGG 3 cut(s) 157, 273, 621
MspR9I CCNGG 2 cut(s) 109, 854
MvaI CCWGG 2 cut(s) 109, 854
MvnI CGCG 3 cut(s) 1197, 1244, 1268
MwoI GCNNNNNNNGC 6 cut(s) 121, 220, 530, 761, 1172, 1188
NdeII GATC 2 cut(s) 676, 1255
NheI GCTAGC 1 cut(s) 613
NlaIII CATG 9 cut(s) 71, 317, 491, 529, 783, 907, 1210, 1253, 1322
NlaIV GGNNCC 2 cut(s) 173, 944
NmuCI GTSAC 2 cut(s) 1262, 1274
NsbI TGCGCA 1 cut(s) 765
NspI RCATGY 1 cut(s) 783
PagI TCATGA 1 cut(s) 67
PciSI GCTCTTC 1 cut(s) 213
PdmI GAANNNNTTC 1 cut(s) 390
PfeI GAWTC 5 cut(s) 413, 503, 549, 734, 1331
PinAI ACCGGT 1 cut(s) 620
PkrI GCNGC 5 cut(s) 512, 585, 588, 1114, 1246
PleI GAGTC 3 cut(s) 32, 339, 599
PpsI GAGTC 3 cut(s) 32, 339, 599
PpuMI RGGWCCY 1 cut(s) 171
Psp124BI GAGCTC 1 cut(s) 1193
Psp5II RGGWCCY 1 cut(s) 171
Psp6I CCWGG 2 cut(s) 107, 852
PspFI CCCAGC 1 cut(s) 124
PspGI CCWGG 2 cut(s) 107, 852
PspN4I GGNNCC 2 cut(s) 173, 944
PspPI GGNCC 2 cut(s) 171, 232
PspPPI RGGWCCY 1 cut(s) 171
PstI CTGCAG 1 cut(s) 142
RsaI GTAC 4 cut(s) 134, 210, 625, 1315
RsaNI GTAC 4 cut(s) 133, 209, 624, 1314
SacI GAGCTC 1 cut(s) 1193
SapI GCTCTTC 1 cut(s) 213
SaqAI TTAA 2 cut(s) 795, 831
SatI GCNGC 5 cut(s) 511, 584, 587, 1113, 1245
Sau3AI GATC 2 cut(s) 676, 1255
Sau96I GGNCC 2 cut(s) 171, 232
SchI GAGTC 3 cut(s) 32, 340, 600
ScrFI CCNGG 2 cut(s) 109, 854
SduI GDGCHC 2 cut(s) 464, 1193
SfaNI GCATC 6 cut(s) 71, 855, 877, 909, 1032, 1153
SfcI CTRYAG 2 cut(s) 138, 1032
SinI GGWCC 1 cut(s) 171
SmlI CTYRAG 1 cut(s) 1123
SmoI CTYRAG 1 cut(s) 1123
SpeI ACTAGT 1 cut(s) 758
Sse9I AATT 2 cut(s) 368, 715
SsiI CCGC 7 cut(s) 179, 560, 707, 940, 1113, 1180, 1244
SspMI CTAG 4 cut(s) 614, 759, 978, 1131
SstI GAGCTC 1 cut(s) 1193
StyD4I CCNGG 2 cut(s) 107, 852
StyI CCWWGG 1 cut(s) 652
TaaI ACNGT 7 cut(s) 31, 264, 726, 881, 1159, 1230, 1367
TaiI ACGT 2 cut(s) 350, 582
TaqI TCGA 3 cut(s) 464, 849, 1284
TasI AATT 2 cut(s) 368, 715
TatI WGTACW 1 cut(s) 1313
TauI GCSGC 2 cut(s) 1115, 1247
TfiI GAWTC 5 cut(s) 413, 503, 549, 734, 1331
Tru1I TTAA 2 cut(s) 795, 831
Tru9I TTAA 2 cut(s) 795, 831
TscAI CASTG 3 cut(s) 147, 267, 1164
TseFI GTSAC 2 cut(s) 1262, 1274
TseI GCWGC 3 cut(s) 510, 583, 586
Tsp45I GTSAC 2 cut(s) 1262, 1274
TspDTI ATGAA 4 cut(s) 4, 541, 708, 1344
TspGWI ACGGA 2 cut(s) 419, 486
TspRI CASTG 3 cut(s) 147, 267, 1164
VpaK11BI GGWCC 1 cut(s) 171
XapI RAATTY 1 cut(s) 368
XceI RCATGY 1 cut(s) 783
XmnI GAANNNNTTC 1 cut(s) 390
XspI CTAG 4 cut(s) 614, 759, 978, 1131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.