AT1G67455

octanoyl transferase activity (acting on glycine-cleavage complex H protein)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
25267925 .. 25269475
1551 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G67455.1

Sequence Viewer

Length: 651 bp
ATGATGATATCCGATCTTCCGGAGGATATGGTAGAAGAGATACTGTCTAGGGTTTCAATAATATCTCTAGGAGCATTGAGATGGAACGATTTATCTAAAGCTCGGGTCATATGTAAAGCAGAAGCTAGACAACAGTTTGCTGGTTTCATGATAAAGGGATCTAAGGAGGTCAGCAACACTAGGCTCGTGGTTTGGAACCCGTATTTGGGGAAAATATGGTCGATTCAACATAGGAGTGCTTATCATTCCGAAAACAGGTATACTCTCGGATATGATAACAACCGTAAACCACAAAATCTTGAGGAACAACTTGCAGTGTTATTGCATAATTGGGGAGCATTTGCGATGGAGATATGGGTGACAACTAATATTGAGCCCAATGCGAAGAAACACGCTGTGATTTTTGATTCAAGCTTATCTTGTGGATCCGTAGCTTGCATCATTGGAGAGACTGGAAACTTGAGAACTGTGGATCTTGGAGTAGCTGCCGTGCCGTATCGTCAGCTACCAGTGTGCTCTTATGCTCCAAGTTTAGAGCAAATCAACCAAGGCCAAGAACTACCCCTTATTGGCTTAACCCAAATATTTATGGAACAACACAAGTACTGGGTTTCCACTTTCCTTGATAACTTGATTACCAAATATGGTTGA

Protein Analysis

216

Amino Acids

24.43

Weight (kDa)

6.52

Isoelectric Point (pI)

44.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 48 - 96 2.9e-10 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 260
AccIII TCCGGA 1 cut(s) 19
AclWI GGATC 4 cut(s) 166, 420, 433, 480
AdeI CACNNNGTG 1 cut(s) 397
AfaI GTAC 1 cut(s) 605
AfiI CCNNNNNNNGG 4 cut(s) 205, 206, 255, 569
AgsI TTSAA 3 cut(s) 57, 227, 411
AjuI GAANNNNNNNTTGG 2 cut(s) 188, 220
AluBI AGCT 6 cut(s) 101, 125, 414, 434, 485, 505
AluI AGCT 6 cut(s) 101, 125, 414, 434, 485, 505
Alw21I GWGCWC 1 cut(s) 518
Alw26I GTCTC 1 cut(s) 443
AlwI GGATC 4 cut(s) 166, 420, 433, 480
Ama87I CYCGRG 1 cut(s) 102
Aor13HI TCCGGA 1 cut(s) 19
AoxI GGCC 1 cut(s) 550
ApeKI GCWGC 1 cut(s) 485
AsuHPI GGTGA 1 cut(s) 370
AvaI CYCGRG 1 cut(s) 102
BamHI GGATCC 1 cut(s) 425
BanII GRGCYC 1 cut(s) 378
BauI CACGAG 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 518
BbvI GCAGC 1 cut(s) 472
BccI CCATC 2 cut(s) 75, 340
BceAI ACGGC 2 cut(s) 473, 478
BcoDI GTCTC 1 cut(s) 443
BfaI CTAG 4 cut(s) 48, 68, 126, 180
BisI GCNGC 1 cut(s) 486
BlsI GCNGC 1 cut(s) 487
BmcAI AGTACT 1 cut(s) 605
BmeT110I CYCGRG 1 cut(s) 102
BmiI GGNNCC 2 cut(s) 197, 427
BmrI ACTGGG 1 cut(s) 616
BmsI GCATC 1 cut(s) 447
BmuI ACTGGG 1 cut(s) 616
BpuEI CTTGAG 2 cut(s) 320, 481
BsaJI CCNNGG 1 cut(s) 547
BsaWI WCCGGW 1 cut(s) 19
Bsc4I CCNNNNNNNGG 4 cut(s) 205, 206, 255, 569
Bse1I ACTGG 3 cut(s) 457, 509, 611
BseAI TCCGGA 1 cut(s) 19
BseDI CCNNGG 1 cut(s) 547
BseLI CCNNNNNNNGG 4 cut(s) 205, 206, 255, 569
BseNI ACTGG 3 cut(s) 457, 509, 611
BseXI GCAGC 1 cut(s) 472
BshFI GGCC 1 cut(s) 552
BsiHKAI GWGCWC 1 cut(s) 518
BsiHKCI CYCGRG 1 cut(s) 102
BsiSI CCGG 1 cut(s) 20
BslI CCNNNNNNNGG 4 cut(s) 205, 206, 255, 569
BsmAI GTCTC 1 cut(s) 443
BsnI GGCC 1 cut(s) 552
BsoBI CYCGRG 1 cut(s) 102
Bsp1286I GDGCHC 2 cut(s) 378, 518
Bsp13I TCCGGA 1 cut(s) 19
Bsp143I GATC 4 cut(s) 13, 158, 425, 472
BspANI GGCC 1 cut(s) 552
BspEI TCCGGA 1 cut(s) 19
BspHI TCATGA 1 cut(s) 147
BspLI GGNNCC 2 cut(s) 197, 427
BspPI GGATC 4 cut(s) 166, 420, 433, 480
BsrI ACTGG 3 cut(s) 457, 509, 611
BssECI CCNNGG 1 cut(s) 547
BssMI GATC 4 cut(s) 13, 158, 425, 472
BssNAI GTATAC 1 cut(s) 261
BssSI CACGAG 1 cut(s) 185
BssT1I CCWWGG 1 cut(s) 547
Bst1107I GTATAC 1 cut(s) 261
Bst2BI CACGAG 1 cut(s) 185
Bst4CI ACNGT 4 cut(s) 45, 135, 284, 469
Bst6I CTCTTC 1 cut(s) 30
BstC8I GCNNGC 1 cut(s) 436
BstDEI CTNAG 1 cut(s) 162
BstKTI GATC 4 cut(s) 16, 161, 428, 475
BstMAI GTCTC 1 cut(s) 443
BstMBI GATC 4 cut(s) 13, 158, 425, 472
BstV1I GCAGC 1 cut(s) 472
BstX2I RGATCY 3 cut(s) 158, 425, 472
BstYI RGATCY 3 cut(s) 158, 425, 472
BstZ17I GTATAC 1 cut(s) 261
BsuRI GGCC 1 cut(s) 552
BtgZI GCGATG 1 cut(s) 359
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 2 cut(s) 321, 516
Cac8I GCNNGC 1 cut(s) 436
CciI TCATGA 1 cut(s) 147
Csp6I GTAC 1 cut(s) 604
CspCI CAANNNNNGTGG 2 cut(s) 604, 639
CviAII CATG 1 cut(s) 148
CviQI GTAC 1 cut(s) 604
DdeI CTNAG 1 cut(s) 162
DpnI GATC 4 cut(s) 15, 160, 427, 474
DpnII GATC 4 cut(s) 13, 158, 425, 472
DraIII CACNNNGTG 1 cut(s) 397
Eam1104I CTCTTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 30
Eco130I CCWWGG 1 cut(s) 547
Eco24I GRGCYC 1 cut(s) 378
Eco32I GATATC 1 cut(s) 9
Eco88I CYCGRG 1 cut(s) 102
EcoRV GATATC 1 cut(s) 9
EcoT14I CCWWGG 1 cut(s) 547
EcoT38I GRGCYC 1 cut(s) 378
ErhI CCWWGG 1 cut(s) 547
FaeI CATG 1 cut(s) 151
FalI AAGNNNNNCTT 2 cut(s) 403, 435
FatI CATG 1 cut(s) 147
FauNDI CATATG 1 cut(s) 110
FblI GTMKAC 1 cut(s) 260
Fnu4HI GCNGC 1 cut(s) 486
FriOI GRGCYC 1 cut(s) 378
Fsp4HI GCNGC 1 cut(s) 486
FspBI CTAG 4 cut(s) 48, 68, 126, 180
GluI GCNGC 1 cut(s) 486
HaeIII GGCC 1 cut(s) 552
HapII CCGG 1 cut(s) 20
Hin1II CATG 1 cut(s) 151
HindIII AAGCTT 1 cut(s) 412
HinfI GANTC 2 cut(s) 223, 407
HpaII CCGG 1 cut(s) 20
HphI GGTGA 1 cut(s) 370
Hpy166II GTNNAC 2 cut(s) 261, 287
Hpy188I TCNGA 3 cut(s) 13, 250, 269
Hpy188III TCNNGA 3 cut(s) 20, 148, 299
Hpy8I GTNNAC 2 cut(s) 261, 287
HpyCH4III ACNGT 4 cut(s) 45, 135, 284, 469
HpyCH4V TGCA 3 cut(s) 314, 325, 438
HpyF3I CTNAG 1 cut(s) 162
Hsp92II CATG 1 cut(s) 151
Kpn2I TCCGGA 1 cut(s) 19
Kzo9I GATC 4 cut(s) 13, 158, 425, 472
LmnI GCTCC 3 cut(s) 71, 335, 529
LpnPI CCDG 6 cut(s) 33, 126, 241, 438, 522, 592
Lsp1109I GCAGC 1 cut(s) 472
LweI GCATC 1 cut(s) 447
MaeI CTAG 4 cut(s) 48, 68, 126, 180
MaeIII GTNAC 1 cut(s) 358
MalI GATC 4 cut(s) 15, 160, 427, 474
MboI GATC 4 cut(s) 13, 158, 425, 472
MboII GAAGA 3 cut(s) 8, 47, 397
MflI RGATCY 3 cut(s) 158, 425, 472
MhlI GDGCHC 2 cut(s) 378, 518
MluCI AATT 1 cut(s) 328
MnlI CCTC 3 cut(s) 16, 160, 295
MroI TCCGGA 1 cut(s) 19
MseI TTAA 1 cut(s) 575
MslI CAYNNNNRTG 2 cut(s) 79, 234
MspI CCGG 1 cut(s) 20
NdeI CATATG 1 cut(s) 110
NdeII GATC 4 cut(s) 13, 158, 425, 472
NlaIII CATG 1 cut(s) 151
NlaIV GGNNCC 2 cut(s) 197, 427
NmuCI GTSAC 1 cut(s) 358
PagI TCATGA 1 cut(s) 147
PfeI GAWTC 2 cut(s) 223, 407
PkrI GCNGC 1 cut(s) 487
PspN4I GGNNCC 2 cut(s) 197, 427
PsuI RGATCY 3 cut(s) 158, 425, 472
RsaI GTAC 1 cut(s) 605
RsaNI GTAC 1 cut(s) 604
RseI CAYNNNNRTG 2 cut(s) 79, 234
SaqAI TTAA 1 cut(s) 575
SatI GCNGC 1 cut(s) 486
Sau3AI GATC 4 cut(s) 13, 158, 425, 472
ScaI AGTACT 1 cut(s) 605
SduI GDGCHC 2 cut(s) 378, 518
SetI ASST 8 cut(s) 103, 127, 171, 260, 416, 436, 487, 507
SfaNI GCATC 1 cut(s) 447
SmiMI CAYNNNNRTG 2 cut(s) 79, 234
SmlI CTYRAG 2 cut(s) 299, 460
SmoI CTYRAG 2 cut(s) 299, 460
Sse9I AATT 1 cut(s) 328
SspI AATATT 2 cut(s) 370, 585
SspMI CTAG 4 cut(s) 48, 68, 126, 180
StyI CCWWGG 1 cut(s) 547
TaaI ACNGT 4 cut(s) 45, 135, 284, 469
TaqI TCGA 1 cut(s) 221
TasI AATT 1 cut(s) 328
TatI WGTACW 1 cut(s) 603
TfiI GAWTC 2 cut(s) 223, 407
Tru1I TTAA 1 cut(s) 575
Tru9I TTAA 1 cut(s) 575
TscAI CASTG 2 cut(s) 321, 516
TseFI GTSAC 1 cut(s) 358
TseI GCWGC 1 cut(s) 485
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 1 cut(s) 136
TspGWI ACGGA 1 cut(s) 418
TspRI CASTG 2 cut(s) 321, 516
XmiI GTMKAC 1 cut(s) 260
XspI CTAG 4 cut(s) 48, 68, 126, 180
ZrmI AGTACT 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.