AT5G47300

3-phosphoinositide-dependent protein kinase activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
19198125 .. 19199375
1251 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G47300.1

Sequence Viewer

Length: 1251 bp
ATGACTAGAAAATATATATATATATATATATATATAATATTAAAAGTGAGAGCACGGGTCGGAGCAAACAATAAAACCCTAATTAACAATCAAAGCCACCTGATAGAGATGAGAAACACATTGATGTTGTCGGACCTTCCAGGAGATTTGTTAGAGGAGATACTTTGTCGCGTTCCTGCCACATCTCTGAAGCAGTTACGATCTACTTGCAAACAATGGAACAATTTATTCAACAATGGGAGATTCACAAGAAAACACTTGGATAAAGCCCCAAAGGATTTTCAGAATCTCATGTTGAGCGACTCTAGGGTATTTTCGATGAGTGTCAGTTTCCATGGAATTCCATCTGTAGAGGCCACATGTGAACTTAGCCTAATCGACTCTTTTTCTAGTTTTGAAGATAAATTCGAGATTTCTCAAGTCTTTCACTGTGACGGCTTATTGTTATGCACCGACGCAGACAACACTAGAATCGTGGTTTGGAACCCGTGTACTGGTAAAACTAGGTGGATTGAACCCAATAATCGTTGCTACTACTATGCTTTTGGATCCTACTTGGACAAATCCTACGGTAATAGCTACAAAATATTGAGCTATAGTGGTTATGGCTACGAGAACCAAGAACTCGCAATCTATGAGATTAACTCTCAATCATGGAGGTTTCTTGATGTCACTCGTGACTGCATCCTCGAAAGATATACTGATTACGGTGTGTCTTTGAAGGGACATACTTACTGGTTTGCGTCAGATGAGAAAGAGAAAAATCTCAGCGTATTTCTAGTCAGTTTTGATTATACAACTGAAAGATTTAGACGTCTACGTCTCCCGTATCAGTGCCCTGATTATAACACTGCGTCTTTATCCGTTGTTAGAGAAGAGAAACTTGCGGTGTTGTTACAACGCGAAAATACATCAAGGACAGAGATATGGGTGACAAGTAGGATTGGTGAGACCAAAGTGGTGTCGTGGAGCATGGTCTTAGCAGTGGATTTCCCGTCCGAACTATTCATTTTGTCTGGCATAAGTTTCTTGGTCGATGCGGAGAAAAAATTCGTCGTATGTTGTGATAATTACTTCGGAGAGGATGAATACGATACCAAAAACTTGGTTCACATTGTTGGAGAGAACAACAAAGTGAGAGAAGTTAATTTCGGAGTATCCGAATCATCTTGGCCATTTTTGTTTAATTATGTTCCAAGTTTGATTCAAATCTGGGAAGGTGTAGGAGGCAAAAGAAAGAGAGTCGAATAA

Protein Analysis

416

Amino Acids

48.39

Weight (kDa)

6.37

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 43 - 84 1.4e-09 F-box domain
FBA_1 PF07734 96 - 404 1.3e-98 F-box associated beta propeller domain
FBA_3 PF08268 110 - 383 2.6e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 846
AasI GACNNNNNNGTC 1 cut(s) 819
AatII GACGTC 1 cut(s) 817
AccI GTMKAC 1 cut(s) 817
AccII CGCG 2 cut(s) 171, 903
AciI CCGC 2 cut(s) 887, 1040
AclWI GGATC 2 cut(s) 543, 556
AcoI YGGCCR 1 cut(s) 1172
AcsI RAATTY 3 cut(s) 339, 404, 1049
AcuI CTGAAG 1 cut(s) 209
AcyI GRCGYC 1 cut(s) 814
AfaI GTAC 1 cut(s) 493
AfiI CCNNNNNNNGG 1 cut(s) 494
AflIII ACRYGT 1 cut(s) 359
AgsI TTSAA 5 cut(s) 232, 398, 515, 721, 1208
AjnI CCWGG 1 cut(s) 139
AjuI GAANNNNNNNTTGG 2 cut(s) 463, 495
AluBI AGCT 2 cut(s) 579, 594
AluI AGCT 2 cut(s) 579, 594
Alw21I GWGCWC 1 cut(s) 55
Alw26I GTCTC 2 cut(s) 827, 944
AlwI GGATC 2 cut(s) 543, 556
AoxI GGCC 2 cut(s) 354, 1172
ApoI RAATTY 3 cut(s) 339, 404, 1049
Asp700I GAANNNNTTC 1 cut(s) 1049
AspS9I GGNCC 1 cut(s) 133
AsuHPI GGTGA 2 cut(s) 943, 959
AvaII GGWCC 1 cut(s) 133
BaeGI GKGCMC 1 cut(s) 839
BalI TGGCCA 1 cut(s) 1174
BamHI GGATCC 1 cut(s) 548
BauI CACGAG 1 cut(s) 675
Bbv12I GWGCWC 1 cut(s) 55
BccI CCATC 1 cut(s) 352
BceAI ACGGC 1 cut(s) 451
BcgI CGANNNNNNTGC 2 cut(s) 189, 223
BciT130I CCWGG 1 cut(s) 141
BciVI GTATCC 1 cut(s) 1168
BcoDI GTCTC 2 cut(s) 827, 944
BfaI CTAG 6 cut(s) 6, 306, 390, 468, 504, 779
BfmI CTRYAG 2 cut(s) 348, 595
BfuI GTATCC 1 cut(s) 1168
Bme1390I CCNGG 1 cut(s) 141
Bme18I GGWCC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 133
BmiI GGNNCC 2 cut(s) 485, 550
BmrFI CCNGG 1 cut(s) 141
BmsI GCATC 2 cut(s) 693, 1027
BplI GAGNNNNNCTC 2 cut(s) 629, 661
BpuEI CTTGAG 1 cut(s) 402
BsaBI GATNNNNATC 1 cut(s) 1208
BsaHI GRCGYC 1 cut(s) 814
BsaI GGTCTC 1 cut(s) 944
BsaJI CCNNGG 1 cut(s) 334
Bsc4I CCNNNNNNNGG 1 cut(s) 494
Bse1I ACTGG 2 cut(s) 499, 740
Bse8I GATNNNNATC 1 cut(s) 1208
BseBI CCWGG 1 cut(s) 141
BseDI CCNNGG 1 cut(s) 334
BseGI GGATG 2 cut(s) 684, 1090
BseJI GATNNNNATC 1 cut(s) 1208
BseLI CCNNNNNNNGG 1 cut(s) 494
BseMII CTCAG 1 cut(s) 781
BseNI ACTGG 2 cut(s) 499, 740
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 1 cut(s) 839
Bsh1236I CGCG 2 cut(s) 171, 903
BshFI GGCC 2 cut(s) 356, 1174
BsiHKAI GWGCWC 1 cut(s) 55
BslFI GGGAC 1 cut(s) 738
BslI CCNNNNNNNGG 1 cut(s) 494
BsmAI GTCTC 2 cut(s) 827, 944
BsmBI CGTCTC 1 cut(s) 827
BsmFI GGGAC 1 cut(s) 738
BsnI GGCC 2 cut(s) 356, 1174
Bso31I GGTCTC 1 cut(s) 944
Bsp1286I GDGCHC 2 cut(s) 55, 839
Bsp143I GATC 2 cut(s) 200, 548
Bsp19I CCATGG 1 cut(s) 334
BspACI CCGC 2 cut(s) 887, 1040
BspANI GGCC 2 cut(s) 356, 1174
BspCNI CTCAG 1 cut(s) 780
BspFNI CGCG 2 cut(s) 171, 903
BspLI GGNNCC 2 cut(s) 485, 550
BspPI GGATC 2 cut(s) 543, 556
BspTNI GGTCTC 1 cut(s) 944
BsrI ACTGG 2 cut(s) 499, 740
BssECI CCNNGG 1 cut(s) 334
BssMI GATC 2 cut(s) 200, 548
BssNI GRCGYC 1 cut(s) 814
BssSI CACGAG 1 cut(s) 675
BssT1I CCWWGG 1 cut(s) 334
Bst2BI CACGAG 1 cut(s) 675
Bst2UI CCWGG 1 cut(s) 141
Bst4CI ACNGT 3 cut(s) 431, 572, 710
Bst6I CTCTTC 1 cut(s) 870
BstACI GRCGYC 1 cut(s) 814
BstDEI CTNAG 3 cut(s) 368, 767, 979
BstDSI CCRYGG 1 cut(s) 334
BstF5I GGATG 2 cut(s) 684, 1090
BstFNI CGCG 2 cut(s) 171, 903
BstKTI GATC 2 cut(s) 203, 551
BstMAI GTCTC 2 cut(s) 827, 944
BstMBI GATC 2 cut(s) 200, 548
BstNI CCWGG 1 cut(s) 141
BstNSI RCATGY 1 cut(s) 363
BstSCI CCNGG 1 cut(s) 139
BstSFI CTRYAG 2 cut(s) 348, 595
BstSLI GKGCMC 1 cut(s) 839
BstUI CGCG 2 cut(s) 171, 903
BstX2I RGATCY 1 cut(s) 548
BstXI CCANNNNNNTGG 1 cut(s) 1105
BstYI RGATCY 1 cut(s) 548
BsuI GTATCC 1 cut(s) 1168
BsuRI GGCC 2 cut(s) 356, 1174
BtgI CCRYGG 1 cut(s) 334
BtsCI GGATG 2 cut(s) 684, 1090
BtsI GCAGTG 2 cut(s) 849, 990
BtsIMutI CAGTG 4 cut(s) 427, 839, 849, 990
Cfr13I GGNCC 1 cut(s) 133
CseI GACGC 3 cut(s) 464, 732, 843
Csp6I GTAC 1 cut(s) 492
CviAII CATG 5 cut(s) 292, 335, 360, 654, 973
CviJI RGCY 9 cut(s) 96, 269, 356, 372, 438, 579, 594, 609, 1174
CviKI_1 RGCY 9 cut(s) 96, 269, 356, 372, 438, 579, 594, 609, 1174
CviQI GTAC 1 cut(s) 492
DdeI CTNAG 3 cut(s) 368, 767, 979
DpnI GATC 2 cut(s) 202, 550
DpnII GATC 2 cut(s) 200, 548
DrdI GACNNNNNNGTC 1 cut(s) 819
DseDI GACNNNNNNGTC 1 cut(s) 819
EaeI YGGCCR 1 cut(s) 1172
Eam1104I CTCTTC 1 cut(s) 870
EarI CTCTTC 1 cut(s) 870
Eco130I CCWWGG 1 cut(s) 334
Eco31I GGTCTC 1 cut(s) 944
Eco47I GGWCC 1 cut(s) 133
Eco57I CTGAAG 1 cut(s) 209
EcoRI GAATTC 1 cut(s) 339
EcoRII CCWGG 1 cut(s) 139
EcoT14I CCWWGG 1 cut(s) 334
ErhI CCWWGG 1 cut(s) 334
Esp3I CGTCTC 1 cut(s) 827
FaeI CATG 5 cut(s) 295, 338, 363, 657, 976
FalI AAGNNNNNCTT 2 cut(s) 867, 899
FaqI GGGAC 1 cut(s) 738
FatI CATG 5 cut(s) 291, 334, 359, 653, 972
FblI GTMKAC 1 cut(s) 817
FokI GGATG 2 cut(s) 671, 1097
FspBI CTAG 6 cut(s) 6, 306, 390, 468, 504, 779
HaeIII GGCC 2 cut(s) 356, 1174
HgaI GACGC 3 cut(s) 464, 732, 843
Hin1I GRCGYC 1 cut(s) 814
Hin1II CATG 5 cut(s) 295, 338, 363, 657, 976
HinfI GANTC 8 cut(s) 243, 286, 302, 380, 471, 1163, 1204, 1242
HphI GGTGA 2 cut(s) 943, 959
Hpy166II GTNNAC 4 cut(s) 365, 492, 818, 1111
Hpy188I TCNGA 9 cut(s) 62, 133, 189, 285, 748, 1000, 1079, 1154, 1162
Hpy188III TCNNGA 3 cut(s) 409, 665, 677
Hpy8I GTNNAC 4 cut(s) 365, 492, 818, 1111
Hpy99I CGWCG 2 cut(s) 458, 1058
HpyAV CCTTC 3 cut(s) 146, 715, 1211
HpyCH4III ACNGT 3 cut(s) 431, 572, 710
HpyCH4IV ACGT 2 cut(s) 814, 820
HpyCH4V TGCA 3 cut(s) 210, 450, 684
HpyF3I CTNAG 3 cut(s) 368, 767, 979
HpySE526I ACGT 2 cut(s) 814, 820
Hsp92I GRCGYC 1 cut(s) 814
Hsp92II CATG 5 cut(s) 295, 338, 363, 657, 976
Kzo9I GATC 2 cut(s) 200, 548
LmnI GCTCC 2 cut(s) 62, 969
LpnPI CCDG 9 cut(s) 113, 126, 153, 189, 480, 721, 852, 1002, 1198
LweI GCATC 2 cut(s) 693, 1027
MaeI CTAG 6 cut(s) 6, 306, 390, 468, 504, 779
MaeII ACGT 2 cut(s) 814, 820
MaeIII GTNAC 6 cut(s) 195, 431, 670, 677, 894, 931
MalI GATC 2 cut(s) 202, 550
MboI GATC 2 cut(s) 200, 548
MboII GAAGA 2 cut(s) 410, 887
MflI RGATCY 1 cut(s) 548
MhlI GDGCHC 2 cut(s) 55, 839
MlsI TGGCCA 1 cut(s) 1174
MluCI AATT 8 cut(s) 81, 223, 339, 404, 1049, 1069, 1147, 1186
MluNI TGGCCA 1 cut(s) 1174
MlyI GAGTC 3 cut(s) 296, 374, 1251
MmeI TCCRAC 3 cut(s) 40, 111, 1099
MnlI CCTC 6 cut(s) 148, 346, 651, 698, 1075, 1220
Mox20I TGGCCA 1 cut(s) 1174
MroXI GAANNNNTTC 1 cut(s) 1049
MscI TGGCCA 1 cut(s) 1174
MseI TTAA 5 cut(s) 41, 84, 642, 1146, 1185
MslI CAYNNNNRTG 1 cut(s) 122
Msp20I TGGCCA 1 cut(s) 1174
MspR9I CCNGG 1 cut(s) 141
MvaI CCWGG 1 cut(s) 141
MvnI CGCG 2 cut(s) 171, 903
NcoI CCATGG 1 cut(s) 334
NdeII GATC 2 cut(s) 200, 548
NlaIII CATG 5 cut(s) 295, 338, 363, 657, 976
NlaIV GGNNCC 2 cut(s) 485, 550
NmuCI GTSAC 4 cut(s) 431, 670, 677, 931
NspI RCATGY 1 cut(s) 363
PciI ACATGT 1 cut(s) 359
PcsI WCGNNNNNNNCGW 1 cut(s) 1158
PdmI GAANNNNTTC 1 cut(s) 1049
PfeI GAWTC 5 cut(s) 243, 286, 471, 1163, 1204
PfoI TCCNGGA 1 cut(s) 139
PleI GAGTC 3 cut(s) 296, 374, 1250
PpsI GAGTC 3 cut(s) 296, 374, 1250
PscI ACATGT 1 cut(s) 359
PsiI TTATAA 1 cut(s) 846
Psp6I CCWGG 1 cut(s) 139
PspGI CCWGG 1 cut(s) 139
PspN4I GGNNCC 2 cut(s) 485, 550
PspPI GGNCC 1 cut(s) 133
PsuI RGATCY 1 cut(s) 548
RsaI GTAC 1 cut(s) 493
RsaNI GTAC 1 cut(s) 492
RseI CAYNNNNRTG 1 cut(s) 122
SaqAI TTAA 5 cut(s) 41, 84, 642, 1146, 1185
Sau3AI GATC 2 cut(s) 200, 548
Sau96I GGNCC 1 cut(s) 133
SchI GAGTC 3 cut(s) 296, 374, 1251
ScrFI CCNGG 1 cut(s) 141
SduI GDGCHC 2 cut(s) 55, 839
SetI ASST 9 cut(s) 102, 138, 509, 581, 596, 662, 817, 823, 1222
SfaNI GCATC 2 cut(s) 693, 1027
SfcI CTRYAG 2 cut(s) 348, 595
SinI GGWCC 1 cut(s) 133
SmiMI CAYNNNNRTG 1 cut(s) 122
SmlI CTYRAG 1 cut(s) 417
SmoI CTYRAG 1 cut(s) 417
Sse9I AATT 8 cut(s) 81, 223, 339, 404, 1049, 1069, 1147, 1186
SsiI CCGC 2 cut(s) 887, 1040
SspI AATATT 2 cut(s) 39, 588
SspMI CTAG 6 cut(s) 6, 306, 390, 468, 504, 779
StyD4I CCNGG 1 cut(s) 139
StyI CCWWGG 1 cut(s) 334
TaaI ACNGT 3 cut(s) 431, 572, 710
TaiI ACGT 2 cut(s) 817, 823
TaqI TCGA 6 cut(s) 317, 378, 408, 690, 1035, 1245
TasI AATT 8 cut(s) 81, 223, 339, 404, 1049, 1069, 1147, 1186
TatI WGTACW 1 cut(s) 491
TfiI GAWTC 5 cut(s) 243, 286, 471, 1163, 1204
Tru1I TTAA 5 cut(s) 41, 84, 642, 1146, 1185
Tru9I TTAA 5 cut(s) 41, 84, 642, 1146, 1185
TscAI CASTG 4 cut(s) 434, 839, 856, 990
TseFI GTSAC 4 cut(s) 431, 670, 677, 931
Tsp45I GTSAC 4 cut(s) 431, 670, 677, 931
TspDTI ATGAA 2 cut(s) 997, 1101
TspGWI ACGGA 1 cut(s) 853
TspRI CASTG 4 cut(s) 434, 839, 856, 990
VpaK11BI GGWCC 1 cut(s) 133
XapI RAATTY 3 cut(s) 339, 404, 1049
XceI RCATGY 1 cut(s) 363
XmiI GTMKAC 1 cut(s) 817
XmnI GAANNNNTTC 1 cut(s) 1049
XspI CTAG 6 cut(s) 6, 306, 390, 468, 504, 779
ZraI GACGTC 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.