AT3G22421

peroxiredoxin activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000186
Physical Location & Seq
Reverse (-)
7949106 .. 7950440
1335 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G22421.1

Sequence Viewer

Length: 1287 bp
ATGACTATGACGACGACAATCTCTCATCTTCCAACGGAGTTATTAGATGAGATAATCTCTAGAGTACCATTAAAGTCTACGAGAGCAGTGAGATTGACTTGCAAAAACTGGGACTCTTTATTCAAAAACCGGAGCTTTATGAAAGAAGAAGCAGCAGCAAAGGAAGGAGAGTCTAGGATGATCGTGTTGATGGATAAAAACCTGTTTGCAATGAGCATCTTCTTCAATGGAATTGACATTGATCCATCTGCAGAGCAAAGAGGTAAACTTACTTGCCTATACGACGATTCAGAACAAGTCAAGATATCTCAAGTCTTTCACTGCGAGGGTTTGTTACTATGCGTCTTGGAAGACGATAAGTGTAGTCTTGTTGTTTGGAATCCGTATTGGGGACAAACAAGGTGGATCGAACCTAGATATTTTTCCCGGATACAGAATTGTTATGGCAGGTACATGTACGTGTACGCTCTTGGATACAATAATAAGAGTCGTAGTCACAAAATCTTGAGGTTTATAGATGGTGCATTCGATTTCCCTTTTTGGTATGAAATCTACGATTTTGACTCTGATTTGTGGACGACTCTTGACGTTACTCCACAATGGTTTATAAATTTCCCTCCCCGTGGTTGTTATAACCGTGGTGTTACTCTCAAGGGAAACACTTACTGGTGTGCTATAAGAAGGAAGTCAAACACTAATTGGTTTGTTGATCTTGATCACATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCTTTGCCGTTTGTTAGATATACGTCCGGAAGCCTTGTGACTCTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTGTTTTGTAACAATGCTACTGTTGAGGTATGGATTACGACTAAGATTGAGACTGACAAGATTTCGTGGAGCAAGTTCTTGACAGTGAATATGTATGTTGACCTTCTGGAAGGGAGTTTTTTCATTGACGAGGTAAAGAAAGTTGCTATGATTTTTGATATACCGATGAATCGCGAGACAGTTTACATCGTGGGAGAGGCTGGAAACGTTAAAGAACTGCATCTAGGACAACCTGTTGATGTTGACAAACACTTTTCCCCACTATTTGTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTCCAGGATGCCAAAGGAAACAAGAAAGCAGTCTAGAAAAACGTCGATGTGATGATGAAAACATATCTAGACTTATTGCACATGAAGAGACATATGTAGTCTATGGGAGATATGTGCCATCAAGGAAAAAACCTAGATGA

Protein Analysis

428

Amino Acids

50.01

Weight (kDa)

7.01

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 47 2.7e-07 F-box domain
FBA_1 PF07734 59 - 380 8.9e-104 F-box associated beta propeller domain
FBA_3 PF08268 104 - 306 3.6e-07 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 608, 633
Acc36I ACCTGC 1 cut(s) 438
AccI GTMKAC 1 cut(s) 77
AccII CGCG 1 cut(s) 1014
AccIII TCCGGA 1 cut(s) 791
AciI CCGC 2 cut(s) 758, 836
AclI AACGTT 1 cut(s) 1047
AclWI GGATC 2 cut(s) 236, 413
AcsI RAATTY 1 cut(s) 610
AfaI GTAC 4 cut(s) 66, 452, 458, 464
AfiI CCNNNNNNNGG 2 cut(s) 389, 623
AflIII ACRYGT 2 cut(s) 453, 459
AgsI TTSAA 2 cut(s) 124, 226
AjnI CCWGG 1 cut(s) 1150
AluBI AGCT 2 cut(s) 135, 832
AluI AGCT 2 cut(s) 135, 832
Alw21I GWGCWC 1 cut(s) 1115
Alw26I GTCTC 3 cut(s) 884, 1010, 1229
AlwI GGATC 2 cut(s) 236, 413
Aor13HI TCCGGA 1 cut(s) 791
ApeKI GCWGC 2 cut(s) 152, 155
ApoI RAATTY 1 cut(s) 610
AspS9I GGNCC 1 cut(s) 755
AsuC2I CCSGG 1 cut(s) 427
AvaII GGWCC 1 cut(s) 755
BbsI GAAGAC 1 cut(s) 357
Bbv12I GWGCWC 1 cut(s) 1115
BbvI GCAGC 2 cut(s) 164, 167
BccI CCATC 4 cut(s) 184, 253, 512, 1273
BceAI ACGGC 1 cut(s) 757
BciT130I CCWGG 1 cut(s) 1152
BciVI GTATCC 2 cut(s) 423, 467
BclI TGATCA 1 cut(s) 715
BcnI CCSGG 1 cut(s) 427
BcoDI GTCTC 3 cut(s) 884, 1010, 1229
BfaI CTAG 7 cut(s) 60, 174, 414, 1064, 1181, 1215, 1281
BfmI CTRYAG 1 cut(s) 249
BfuAI ACCTGC 1 cut(s) 438
BfuI GTATCC 2 cut(s) 423, 467
BisI GCNGC 2 cut(s) 153, 156
BlsI GCNGC 2 cut(s) 154, 157
Bme1390I CCNGG 2 cut(s) 427, 1152
Bme18I GGWCC 1 cut(s) 755
BmgT120I GGNCC 1 cut(s) 755
BmrFI CCNGG 2 cut(s) 427, 1152
BmrI ACTGGG 1 cut(s) 118
BmsI GCATC 3 cut(s) 225, 1069, 1145
BmuI ACTGGG 1 cut(s) 118
BpiI GAAGAC 1 cut(s) 357
BplI GAGNNNNNCTC 2 cut(s) 41, 73
BpmI CTGGAG 1 cut(s) 1134
BpuEI CTTGAG 3 cut(s) 294, 526, 635
BpuMI CCSGG 1 cut(s) 427
BsaAI YACGTR 1 cut(s) 460
BsaBI GATNNNNATC 1 cut(s) 714
BsaJI CCNNGG 2 cut(s) 622, 637
BsaWI WCCGGW 2 cut(s) 129, 791
Bsc4I CCNNNNNNNGG 2 cut(s) 389, 623
Bse1I ACTGG 2 cut(s) 113, 671
Bse3DI GCAATG 1 cut(s) 216
Bse8I GATNNNNATC 1 cut(s) 714
BseAI TCCGGA 1 cut(s) 791
BseBI CCWGG 1 cut(s) 1152
BseDI CCNNGG 2 cut(s) 622, 637
BseGI GGATG 2 cut(s) 183, 1160
BseJI GATNNNNATC 1 cut(s) 714
BseLI CCNNNNNNNGG 2 cut(s) 389, 623
BseMI GCAATG 1 cut(s) 216
BseNI ACTGG 2 cut(s) 113, 671
BseXI GCAGC 2 cut(s) 164, 167
Bsh1236I CGCG 1 cut(s) 1014
BsiHKAI GWGCWC 1 cut(s) 1115
BsiSI CCGG 3 cut(s) 130, 427, 792
BslFI GGGAC 2 cut(s) 125, 405
BslI CCNNNNNNNGG 2 cut(s) 389, 623
BsmAI GTCTC 3 cut(s) 884, 1010, 1229
BsmFI GGGAC 2 cut(s) 125, 405
BsmI GAATGC 1 cut(s) 524
Bsp1286I GDGCHC 1 cut(s) 1115
Bsp13I TCCGGA 1 cut(s) 791
Bsp143I GATC 5 cut(s) 180, 241, 405, 709, 715
Bsp68I TCGCGA 1 cut(s) 1014
BspACI CCGC 2 cut(s) 758, 836
BspEI TCCGGA 1 cut(s) 791
BspFNI CGCG 1 cut(s) 1014
BspMAI CTGCAG 1 cut(s) 253
BspMI ACCTGC 1 cut(s) 438
BspPI GGATC 2 cut(s) 236, 413
BsrDI GCAATG 1 cut(s) 216
BsrI ACTGG 2 cut(s) 113, 671
BssECI CCNNGG 2 cut(s) 622, 637
BssMI GATC 5 cut(s) 180, 241, 405, 709, 715
Bst2UI CCWGG 1 cut(s) 1152
Bst4CI ACNGT 4 cut(s) 638, 862, 925, 1021
Bst6I CTCTTC 2 cut(s) 819, 1227
BstBAI YACGTR 1 cut(s) 460
BstC8I GCNNGC 1 cut(s) 834
BstDEI CTNAG 1 cut(s) 882
BstDSI CCRYGG 2 cut(s) 622, 637
BstF5I GGATG 2 cut(s) 183, 1160
BstFNI CGCG 1 cut(s) 1014
BstKTI GATC 5 cut(s) 183, 244, 408, 712, 718
BstMAI GTCTC 3 cut(s) 884, 1010, 1229
BstMBI GATC 5 cut(s) 180, 241, 405, 709, 715
BstMWI GCNNNNNNNGC 1 cut(s) 1141
BstNI CCWGG 1 cut(s) 1152
BstNSI RCATGY 1 cut(s) 457
BstSCI CCNGG 2 cut(s) 425, 1150
BstSFI CTRYAG 1 cut(s) 249
BstUI CGCG 1 cut(s) 1014
BstV1I GCAGC 2 cut(s) 164, 167
BstV2I GAAGAC 1 cut(s) 357
BsuI GTATCC 2 cut(s) 423, 467
BtgI CCRYGG 2 cut(s) 622, 637
BtsCI GGATG 2 cut(s) 183, 1160
BtsI GCAGTG 2 cut(s) 93, 319
BtsIMutI CAGTG 3 cut(s) 93, 319, 930
BtuMI TCGCGA 1 cut(s) 1014
BveI ACCTGC 1 cut(s) 438
Cac8I GCNNGC 1 cut(s) 834
Cfr13I GGNCC 1 cut(s) 755
CseI GACGC 1 cut(s) 331
Csp6I GTAC 4 cut(s) 65, 451, 457, 463
CspCI CAANNNNNGTGG 2 cut(s) 383, 418
CviAII CATG 2 cut(s) 454, 1229
CviJI RGCY 4 cut(s) 135, 798, 832, 1040
CviKI_1 RGCY 4 cut(s) 135, 798, 832, 1040
CviQI GTAC 4 cut(s) 65, 451, 457, 463
DdeI CTNAG 1 cut(s) 882
DpnI GATC 5 cut(s) 182, 243, 407, 711, 717
DpnII GATC 5 cut(s) 180, 241, 405, 709, 715
Eam1104I CTCTTC 2 cut(s) 819, 1227
EarI CTCTTC 2 cut(s) 819, 1227
Eco32I GATATC 1 cut(s) 306
Eco47I GGWCC 1 cut(s) 755
EcoRII CCWGG 1 cut(s) 1150
EcoRV GATATC 1 cut(s) 306
FaeI CATG 2 cut(s) 457, 1232
FalI AAGNNNNNCTT 2 cut(s) 816, 848
FaqI GGGAC 2 cut(s) 125, 405
FatI CATG 2 cut(s) 453, 1228
FauNDI CATATG 1 cut(s) 1240
FbaI TGATCA 1 cut(s) 715
FblI GTMKAC 1 cut(s) 77
Fnu4HI GCNGC 2 cut(s) 153, 156
FokI GGATG 2 cut(s) 190, 1167
Fsp4HI GCNGC 2 cut(s) 153, 156
FspBI CTAG 7 cut(s) 60, 174, 414, 1064, 1181, 1215, 1281
GluI GCNGC 2 cut(s) 153, 156
GsuI CTGGAG 1 cut(s) 1134
HapII CCGG 3 cut(s) 130, 427, 792
HgaI GACGC 1 cut(s) 331
Hin1II CATG 2 cut(s) 457, 1232
HincII GTYRAC 2 cut(s) 940, 1084
HindII GTYRAC 2 cut(s) 940, 1084
HindIII AAGCTT 1 cut(s) 830
HinfI GANTC 9 cut(s) 113, 170, 287, 379, 487, 563, 580, 805, 1009
HpaII CCGG 3 cut(s) 130, 427, 792
Hpy166II GTNNAC 7 cut(s) 78, 266, 463, 576, 940, 1024, 1084
Hpy188I TCNGA 2 cut(s) 292, 568
Hpy8I GTNNAC 7 cut(s) 78, 266, 463, 576, 940, 1024, 1084
Hpy99I CGWCG 3 cut(s) 16, 287, 1194
HpyAV CCTTC 4 cut(s) 158, 675, 944, 953
HpyCH4III ACNGT 4 cut(s) 638, 862, 925, 1021
HpyCH4IV ACGT 5 cut(s) 459, 588, 788, 1047, 1189
HpyCH4V TGCA 7 cut(s) 102, 209, 251, 524, 1060, 1135, 1226
HpyF10VI GCNNNNNNNGC 1 cut(s) 1141
HpyF3I CTNAG 1 cut(s) 882
HpySE526I ACGT 5 cut(s) 459, 588, 788, 1047, 1189
Hsp92II CATG 2 cut(s) 457, 1232
Kpn2I TCCGGA 1 cut(s) 791
Ksp22I TGATCA 1 cut(s) 715
Kzo9I GATC 5 cut(s) 180, 241, 405, 709, 715
LmnI GCTCC 2 cut(s) 132, 909
Lsp1109I GCAGC 2 cut(s) 164, 167
LweI GCATC 3 cut(s) 225, 1069, 1145
MaeI CTAG 7 cut(s) 60, 174, 414, 1064, 1181, 1215, 1281
MaeII ACGT 5 cut(s) 459, 588, 788, 1047, 1189
MaeIII GTNAC 6 cut(s) 333, 494, 589, 643, 802, 848
MalI GATC 5 cut(s) 182, 243, 407, 711, 717
MboI GATC 5 cut(s) 180, 241, 405, 709, 715
MboII GAAGA 7 cut(s) 20, 158, 211, 214, 362, 836, 1244
MhlI GDGCHC 1 cut(s) 1115
MluCI AATT 4 cut(s) 231, 436, 610, 697
MlyI GAGTC 6 cut(s) 107, 179, 496, 557, 574, 799
MmeI TCCRAC 1 cut(s) 56
MnlI CCTC 8 cut(s) 254, 319, 501, 627, 859, 964, 1030, 1158
MroI TCCGGA 1 cut(s) 791
MseI TTAA 2 cut(s) 71, 1050
MslI CAYNNNNRTG 1 cut(s) 458
MspI CCGG 3 cut(s) 130, 427, 792
MspR9I CCNGG 2 cut(s) 427, 1152
Mva1269I GAATGC 1 cut(s) 524
MvaI CCWGG 1 cut(s) 1152
MvnI CGCG 1 cut(s) 1014
MwoI GCNNNNNNNGC 1 cut(s) 1141
NciI CCSGG 1 cut(s) 427
NdeI CATATG 1 cut(s) 1240
NdeII GATC 5 cut(s) 180, 241, 405, 709, 715
NlaIII CATG 2 cut(s) 457, 1232
NmuCI GTSAC 2 cut(s) 494, 802
NruI TCGCGA 1 cut(s) 1014
NspI RCATGY 1 cut(s) 457
PciI ACATGT 1 cut(s) 453
PctI GAATGC 1 cut(s) 524
PfeI GAWTC 3 cut(s) 287, 379, 1009
PfoI TCCNGGA 2 cut(s) 425, 1150
PkrI GCNGC 2 cut(s) 154, 157
PleI GAGTC 6 cut(s) 107, 178, 495, 557, 574, 799
PpsI GAGTC 6 cut(s) 107, 178, 495, 557, 574, 799
Ppu21I YACGTR 1 cut(s) 460
PscI ACATGT 1 cut(s) 453
PsiI TTATAA 2 cut(s) 608, 633
Psp1406I AACGTT 1 cut(s) 1047
Psp6I CCWGG 1 cut(s) 1150
PspGI CCWGG 1 cut(s) 1150
PspPI GGNCC 1 cut(s) 755
PstI CTGCAG 1 cut(s) 253
RruI TCGCGA 1 cut(s) 1014
RsaI GTAC 4 cut(s) 66, 452, 458, 464
RsaNI GTAC 4 cut(s) 65, 451, 457, 463
RseI CAYNNNNRTG 1 cut(s) 458
SaqAI TTAA 2 cut(s) 71, 1050
SatI GCNGC 2 cut(s) 153, 156
Sau3AI GATC 5 cut(s) 180, 241, 405, 709, 715
Sau96I GGNCC 1 cut(s) 755
SchI GAGTC 6 cut(s) 107, 179, 496, 557, 574, 799
ScrFI CCNGG 2 cut(s) 427, 1152
SduI GDGCHC 1 cut(s) 1115
SfaNI GCATC 3 cut(s) 225, 1069, 1145
SfcI CTRYAG 1 cut(s) 249
SinI GGWCC 1 cut(s) 755
SmiMI CAYNNNNRTG 1 cut(s) 458
SmlI CTYRAG 3 cut(s) 309, 505, 650
SmoI CTYRAG 3 cut(s) 309, 505, 650
Sse9I AATT 4 cut(s) 231, 436, 610, 697
SsiI CCGC 2 cut(s) 758, 836
SspMI CTAG 7 cut(s) 60, 174, 414, 1064, 1181, 1215, 1281
StyD4I CCNGG 2 cut(s) 425, 1150
TaaI ACNGT 4 cut(s) 638, 862, 925, 1021
TaiI ACGT 5 cut(s) 462, 591, 791, 1050, 1192
TaqI TCGA 3 cut(s) 408, 528, 1192
TasI AATT 4 cut(s) 231, 436, 610, 697
TfiI GAWTC 3 cut(s) 287, 379, 1009
Tru1I TTAA 2 cut(s) 71, 1050
Tru9I TTAA 2 cut(s) 71, 1050
TscAI CASTG 3 cut(s) 93, 326, 930
TseFI GTSAC 2 cut(s) 494, 802
TseI GCWGC 2 cut(s) 152, 155
Tsp45I GTSAC 2 cut(s) 494, 802
TspDTI ATGAA 6 cut(s) 155, 561, 952, 1022, 1218, 1245
TspGWI ACGGA 2 cut(s) 50, 372
TspRI CASTG 3 cut(s) 93, 326, 930
VpaK11BI GGWCC 1 cut(s) 755
XapI RAATTY 1 cut(s) 610
XbaI TCTAGA 3 cut(s) 59, 1180, 1214
XceI RCATGY 1 cut(s) 457
XmiI GTMKAC 1 cut(s) 77
XspI CTAG 7 cut(s) 60, 174, 414, 1064, 1181, 1215, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.