AT3G23633

3-phosphoinositide-dependent protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000186
Physical Location & Seq
Reverse (-)
8496440 .. 8497281
842 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G23633.1

Sequence Viewer

Length: 474 bp
ATGGTTTTCGACGGCAGCGTAGACGCAAAAACGGGTGTATCTTTGAAGGGAAATATGTACTGGCTTGCTTCATCGGAAACAGAATTTTTACTCAGTTTTGATTTTACAGGGGAGAGATTCAAACGTTTTTATCTTCCTTCCCTTCCGCCAATTTTTAATCTTGGTAAGAATGTTCTATCAGTTGTTAGAGATGAACAATTCTCAGTGTTATATCAGAACTTTCGTACATTAAAAATGAACATGTGGATGACGACCAATGAAATTGATATTGAAGTTGCCTTGTTGTGGAAAAAATCTTTGACAGAGGATTTTAAAGTTCGCAATCGTTCTCTTCTAGTTTGCATGAGTTCTTTGTTCCATGAGGAGAAGAAACTAGCAGTGTGTTGTAATTTAAACAGGGACATGGTAACCGTAATTGGACAGCATGATACACATAGGGGTGGATCTACAGTGTGTGACGGTGGGGCACGTTGA

Protein Analysis

157

Amino Acids

17.96

Weight (kDa)

7.67

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 6 - 142 4.2e-33 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 21
AciI CCGC 1 cut(s) 146
AclI AACGTT 1 cut(s) 124
AclWI GGATC 1 cut(s) 451
AcsI RAATTY 1 cut(s) 83
AfaI GTAC 2 cut(s) 59, 226
AfiI CCNNNNNNNGG 1 cut(s) 285
AflIII ACRYGT 1 cut(s) 240
AgsI TTSAA 3 cut(s) 46, 121, 272
AlwI GGATC 1 cut(s) 451
ApeKI GCWGC 1 cut(s) 15
ApoI RAATTY 1 cut(s) 83
BaeGI GKGCMC 1 cut(s) 469
BaeI ACNNNNGTAYC 2 cut(s) 21, 54
BbvI GCAGC 1 cut(s) 27
BceAI ACGGC 1 cut(s) 28
BfaI CTAG 2 cut(s) 335, 374
BfmI CTRYAG 1 cut(s) 447
BisI GCNGC 1 cut(s) 16
BlsI GCNGC 1 cut(s) 17
Bsc4I CCNNNNNNNGG 1 cut(s) 285
Bse1I ACTGG 1 cut(s) 65
BseGI GGATG 1 cut(s) 252
BseLI CCNNNNNNNGG 1 cut(s) 285
BseMII CTCAG 2 cut(s) 106, 216
BseNI ACTGG 1 cut(s) 65
BseRI GAGGAG 1 cut(s) 377
BseSI GKGCMC 1 cut(s) 469
BseXI GCAGC 1 cut(s) 27
BslFI GGGAC 1 cut(s) 413
BslI CCNNNNNNNGG 1 cut(s) 285
BsmFI GGGAC 1 cut(s) 413
Bsp1286I GDGCHC 1 cut(s) 469
Bsp143I GATC 1 cut(s) 443
BspACI CCGC 1 cut(s) 146
BspCNI CTCAG 2 cut(s) 105, 215
BspPI GGATC 1 cut(s) 451
BsrI ACTGG 1 cut(s) 65
BssMI GATC 1 cut(s) 443
Bst4CI ACNGT 3 cut(s) 412, 451, 461
Bst6I CTCTTC 1 cut(s) 336
BstC8I GCNNGC 1 cut(s) 66
BstDEI CTNAG 2 cut(s) 92, 202
BstEII GGTNACC 1 cut(s) 406
BstF5I GGATG 1 cut(s) 252
BstKTI GATC 1 cut(s) 446
BstMBI GATC 1 cut(s) 443
BstNSI RCATGY 1 cut(s) 244
BstPI GGTNACC 1 cut(s) 406
BstSFI CTRYAG 1 cut(s) 447
BstSLI GKGCMC 1 cut(s) 469
BstV1I GCAGC 1 cut(s) 27
BstX2I RGATCY 1 cut(s) 443
BstYI RGATCY 1 cut(s) 443
BtsCI GGATG 1 cut(s) 252
BtsI GCAGTG 1 cut(s) 384
BtsIMutI CAGTG 3 cut(s) 210, 384, 456
Cac8I GCNNGC 1 cut(s) 66
CseI GACGC 1 cut(s) 32
Csp6I GTAC 2 cut(s) 58, 225
CviAII CATG 5 cut(s) 241, 343, 359, 403, 425
CviJI RGCY 1 cut(s) 64
CviKI_1 RGCY 1 cut(s) 64
CviQI GTAC 2 cut(s) 58, 225
DdeI CTNAG 2 cut(s) 92, 202
DpnI GATC 1 cut(s) 445
DpnII GATC 1 cut(s) 443
DraI TTTAAA 2 cut(s) 313, 393
Eam1104I CTCTTC 1 cut(s) 336
EarI CTCTTC 1 cut(s) 336
EciI GGCGGA 1 cut(s) 135
Eco91I GGTNACC 1 cut(s) 406
EcoO65I GGTNACC 1 cut(s) 406
FaeI CATG 5 cut(s) 244, 346, 362, 406, 428
FaiI YATR 8 cut(s) 56, 211, 242, 344, 360, 404, 426, 435
FaqI GGGAC 1 cut(s) 413
FatI CATG 5 cut(s) 240, 342, 358, 402, 424
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 1 cut(s) 16
FokI GGATG 1 cut(s) 259
Fsp4HI GCNGC 1 cut(s) 16
FspBI CTAG 2 cut(s) 335, 374
GluI GCNGC 1 cut(s) 16
HgaI GACGC 1 cut(s) 32
Hin1II CATG 5 cut(s) 244, 346, 362, 406, 428
HinfI GANTC 1 cut(s) 117
Hpy166II GTNNAC 1 cut(s) 22
Hpy188I TCNGA 2 cut(s) 76, 216
Hpy8I GTNNAC 1 cut(s) 22
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 3 cut(s) 40, 147, 152
HpyCH4III ACNGT 3 cut(s) 412, 451, 461
HpyCH4IV ACGT 2 cut(s) 124, 469
HpyCH4V TGCA 1 cut(s) 342
HpyF3I CTNAG 2 cut(s) 92, 202
HpySE526I ACGT 2 cut(s) 124, 469
Hsp92II CATG 5 cut(s) 244, 346, 362, 406, 428
Kzo9I GATC 1 cut(s) 443
LpnPI CCDG 3 cut(s) 46, 93, 382
Lsp1109I GCAGC 1 cut(s) 27
MaeI CTAG 2 cut(s) 335, 374
MaeII ACGT 2 cut(s) 124, 469
MaeIII GTNAC 2 cut(s) 406, 455
MalI GATC 1 cut(s) 445
MboI GATC 1 cut(s) 443
MboII GAAGA 3 cut(s) 125, 323, 379
MflI RGATCY 1 cut(s) 443
MhlI GDGCHC 1 cut(s) 469
MluCI AATT 6 cut(s) 83, 150, 197, 261, 388, 414
MnlI CCTC 2 cut(s) 298, 355
MseI TTAA 4 cut(s) 156, 230, 312, 392
MslI CAYNNNNRTG 2 cut(s) 245, 438
NdeII GATC 1 cut(s) 443
NlaIII CATG 5 cut(s) 244, 346, 362, 406, 428
NmuCI GTSAC 1 cut(s) 455
NspI RCATGY 1 cut(s) 244
PciI ACATGT 1 cut(s) 240
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PfeI GAWTC 1 cut(s) 117
PkrI GCNGC 1 cut(s) 17
PscI ACATGT 1 cut(s) 240
Psp1406I AACGTT 1 cut(s) 124
PspEI GGTNACC 1 cut(s) 406
PsuI RGATCY 1 cut(s) 443
RsaI GTAC 2 cut(s) 59, 226
RsaNI GTAC 2 cut(s) 58, 225
RseI CAYNNNNRTG 2 cut(s) 245, 438
SaqAI TTAA 4 cut(s) 156, 230, 312, 392
SatI GCNGC 1 cut(s) 16
Sau3AI GATC 1 cut(s) 443
SduI GDGCHC 1 cut(s) 469
SetI ASST 2 cut(s) 127, 472
SfcI CTRYAG 1 cut(s) 447
SmiMI CAYNNNNRTG 2 cut(s) 245, 438
Sse9I AATT 6 cut(s) 83, 150, 197, 261, 388, 414
SsiI CCGC 1 cut(s) 146
SspMI CTAG 2 cut(s) 335, 374
TaaI ACNGT 3 cut(s) 412, 451, 461
TaiI ACGT 2 cut(s) 127, 472
TaqI TCGA 1 cut(s) 9
TasI AATT 6 cut(s) 83, 150, 197, 261, 388, 414
TatI WGTACW 1 cut(s) 57
TfiI GAWTC 1 cut(s) 117
Tru1I TTAA 4 cut(s) 156, 230, 312, 392
Tru9I TTAA 4 cut(s) 156, 230, 312, 392
TscAI CASTG 3 cut(s) 210, 384, 456
TseFI GTSAC 1 cut(s) 455
TseI GCWGC 1 cut(s) 15
Tsp45I GTSAC 1 cut(s) 455
TspDTI ATGAA 4 cut(s) 60, 207, 251, 273
TspRI CASTG 3 cut(s) 210, 384, 456
XapI RAATTY 1 cut(s) 83
XceI RCATGY 1 cut(s) 244
XmiI GTMKAC 1 cut(s) 21
XspI CTAG 2 cut(s) 335, 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.