termination of mitochondrial transcription
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 7 - 48 | 3.6e-09 | F-box domain |
| F-box-like | PF12937 | 7 - 46 | 1e-08 | F-box-like |
| FBA_1 | PF07734 | 59 - 375 | 1.6e-100 | F-box associated beta propeller domain |
| b-prop_At3g26010-like | PF24750 | 89 - 293 | 1.1e-08 | F-box protein At3g26010-like, beta-propeller |
| FBA_3 | PF08268 | 92 - 315 | 1.3e-17 | F-box associated beta propeller domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 201, 1041, 1053 |
| AciI | CCGC | 3 cut(s) | 237, 753, 788 |
| AclI | AACGTT | 1 cut(s) | 415 |
| AclWI | GGATC | 4 cut(s) | 33, 122, 236, 407 |
| AcoI | YGGCCR | 1 cut(s) | 1085 |
| AcsI | RAATTY | 2 cut(s) | 225, 533 |
| AcuI | CTGAAG | 1 cut(s) | 765 |
| AfaI | GTAC | 3 cut(s) | 113, 382, 683 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 383 |
| AgeI | ACCGGT | 1 cut(s) | 383 |
| AgsI | TTSAA | 5 cut(s) | 628, 694, 809, 819, 1081 |
| AjnI | CCWGG | 2 cut(s) | 392, 513 |
| AluBI | AGCT | 4 cut(s) | 555, 942, 1073, 1113 |
| AluI | AGCT | 4 cut(s) | 555, 942, 1073, 1113 |
| Alw21I | GWGCWC | 1 cut(s) | 1075 |
| Alw26I | GTCTC | 2 cut(s) | 81, 719 |
| AlwI | GGATC | 4 cut(s) | 33, 122, 236, 407 |
| Ama87I | CYCGRG | 1 cut(s) | 251 |
| AoxI | GGCC | 2 cut(s) | 858, 1085 |
| ApoI | RAATTY | 2 cut(s) | 225, 533 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 351, 383 |
| AsiGI | ACCGGT | 1 cut(s) | 383 |
| AsuHPI | GGTGA | 3 cut(s) | 28, 251, 832 |
| AvaI | CYCGRG | 1 cut(s) | 251 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 364, 397, 741, 774 |
| BalI | TGGCCA | 1 cut(s) | 1087 |
| BanII | GRGCYC | 1 cut(s) | 1075 |
| BauI | CACGAG | 1 cut(s) | 591 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| Bbv12I | GWGCWC | 1 cut(s) | 1075 |
| BccI | CCATC | 3 cut(s) | 7, 102, 253 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 500, 534 |
| BciT130I | CCWGG | 2 cut(s) | 394, 515 |
| BciVI | GTATCC | 1 cut(s) | 440 |
| BcoDI | GTCTC | 2 cut(s) | 81, 719 |
| BfaI | CTAG | 3 cut(s) | 60, 80, 357 |
| BfuI | GTATCC | 1 cut(s) | 440 |
| BglII | AGATCT | 1 cut(s) | 540 |
| Bme1390I | CCNGG | 2 cut(s) | 394, 515 |
| BmeT110I | CYCGRG | 1 cut(s) | 251 |
| BmiI | GGNNCC | 2 cut(s) | 66, 374 |
| BmrFI | CCNGG | 2 cut(s) | 394, 515 |
| BmsI | GCATC | 1 cut(s) | 508 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| BpmI | CTGGAG | 1 cut(s) | 672 |
| BpuEI | CTTGAG | 1 cut(s) | 508 |
| BsaAI | YACGTR | 1 cut(s) | 451 |
| BsaJI | CCNNGG | 2 cut(s) | 220, 613 |
| BsaWI | WCCGGW | 1 cut(s) | 383 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 383 |
| Bse118I | RCCGGY | 1 cut(s) | 383 |
| BseBI | CCWGG | 2 cut(s) | 394, 515 |
| BseDI | CCNNGG | 2 cut(s) | 220, 613 |
| BseGI | GGATG | 1 cut(s) | 523 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BseRI | GAGGAG | 2 cut(s) | 971, 1180 |
| BseYI | CCCAGC | 1 cut(s) | 407 |
| BsgI | GTGCAG | 1 cut(s) | 571 |
| BshFI | GGCC | 2 cut(s) | 860, 1087 |
| BshTI | ACCGGT | 1 cut(s) | 383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1075 |
| BsiHKCI | CYCGRG | 1 cut(s) | 251 |
| BsiSI | CCGG | 1 cut(s) | 384 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BsmAI | GTCTC | 2 cut(s) | 81, 719 |
| BsmBI | CGTCTC | 1 cut(s) | 719 |
| BsnI | GGCC | 2 cut(s) | 860, 1087 |
| BsoBI | CYCGRG | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1075 |
| Bsp143I | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| Bsp19I | CCATGG | 2 cut(s) | 220, 613 |
| BspACI | CCGC | 3 cut(s) | 237, 753, 788 |
| BspANI | GGCC | 2 cut(s) | 860, 1087 |
| BspLI | GGNNCC | 2 cut(s) | 66, 374 |
| BspPI | GGATC | 4 cut(s) | 33, 122, 236, 407 |
| BsrFI | RCCGGY | 1 cut(s) | 383 |
| BssAI | RCCGGY | 1 cut(s) | 383 |
| BssECI | CCNNGG | 2 cut(s) | 220, 613 |
| BssMI | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| BssSI | CACGAG | 1 cut(s) | 591 |
| BssT1I | CCWWGG | 2 cut(s) | 220, 613 |
| Bst2BI | CACGAG | 1 cut(s) | 591 |
| Bst2UI | CCWGG | 2 cut(s) | 394, 515 |
| Bst4CI | ACNGT | 3 cut(s) | 320, 326, 422 |
| Bst6I | CTCTTC | 1 cut(s) | 726 |
| BstBAI | YACGTR | 1 cut(s) | 451 |
| BstDEI | CTNAG | 3 cut(s) | 269, 345, 889 |
| BstDSI | CCRYGG | 2 cut(s) | 220, 613 |
| BstEII | GGTNACC | 1 cut(s) | 838 |
| BstF5I | GGATG | 1 cut(s) | 523 |
| BstKTI | GATC | 7 cut(s) | 28, 130, 217, 244, 402, 543, 1036 |
| BstMAI | GTCTC | 2 cut(s) | 81, 719 |
| BstMBI | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 609 |
| BstNI | CCWGG | 2 cut(s) | 394, 515 |
| BstNSI | RCATGY | 2 cut(s) | 102, 622 |
| BstPI | GGTNACC | 1 cut(s) | 838 |
| BstSCI | CCNGG | 2 cut(s) | 392, 513 |
| BstSNI | TACGTA | 1 cut(s) | 451 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| BstX2I | RGATCY | 3 cut(s) | 25, 127, 540 |
| BstYI | RGATCY | 3 cut(s) | 25, 127, 540 |
| BsuI | GTATCC | 1 cut(s) | 440 |
| BsuRI | GGCC | 2 cut(s) | 860, 1087 |
| BtgI | CCRYGG | 2 cut(s) | 220, 613 |
| BtsCI | GGATG | 1 cut(s) | 523 |
| BtsI | GCAGTG | 2 cut(s) | 900, 978 |
| BtsIMutI | CAGTG | 3 cut(s) | 316, 900, 978 |
| Cfr10I | RCCGGY | 1 cut(s) | 383 |
| CseI | GACGC | 1 cut(s) | 701 |
| CsiI | ACCWGGT | 1 cut(s) | 392 |
| Csp6I | GTAC | 3 cut(s) | 112, 381, 682 |
| CspAI | ACCGGT | 1 cut(s) | 383 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 377, 412 |
| CviAII | CATG | 8 cut(s) | 99, 221, 378, 564, 614, 619, 676, 873 |
| CviJI | RGCY | 8 cut(s) | 555, 603, 669, 860, 942, 1073, 1087, 1113 |
| CviKI_1 | RGCY | 8 cut(s) | 555, 603, 669, 860, 942, 1073, 1087, 1113 |
| CviQI | GTAC | 3 cut(s) | 112, 381, 682 |
| DdeI | CTNAG | 3 cut(s) | 269, 345, 889 |
| DpnI | GATC | 7 cut(s) | 27, 129, 216, 243, 401, 542, 1035 |
| DpnII | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| EaeI | YGGCCR | 1 cut(s) | 1085 |
| Eam1104I | CTCTTC | 1 cut(s) | 726 |
| EarI | CTCTTC | 1 cut(s) | 726 |
| Ecl136II | GAGCTC | 1 cut(s) | 1073 |
| Eco105I | TACGTA | 1 cut(s) | 451 |
| Eco130I | CCWWGG | 2 cut(s) | 220, 613 |
| Eco24I | GRGCYC | 1 cut(s) | 1075 |
| Eco32I | GATATC | 1 cut(s) | 285 |
| Eco53kI | GAGCTC | 1 cut(s) | 1073 |
| Eco57I | CTGAAG | 1 cut(s) | 765 |
| Eco88I | CYCGRG | 1 cut(s) | 251 |
| Eco91I | GGTNACC | 1 cut(s) | 838 |
| EcoICRI | GAGCTC | 1 cut(s) | 1073 |
| EcoO65I | GGTNACC | 1 cut(s) | 838 |
| EcoRI | GAATTC | 1 cut(s) | 225 |
| EcoRII | CCWGG | 2 cut(s) | 392, 513 |
| EcoRV | GATATC | 1 cut(s) | 285 |
| EcoT14I | CCWWGG | 2 cut(s) | 220, 613 |
| EcoT38I | GRGCYC | 1 cut(s) | 1075 |
| ErhI | CCWWGG | 2 cut(s) | 220, 613 |
| Esp3I | CGTCTC | 1 cut(s) | 719 |
| FaeI | CATG | 8 cut(s) | 102, 224, 381, 567, 617, 622, 679, 876 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 134, 166 |
| FatI | CATG | 8 cut(s) | 98, 220, 377, 563, 613, 618, 675, 872 |
| FokI | GGATG | 1 cut(s) | 530 |
| FriOI | GRGCYC | 1 cut(s) | 1075 |
| FspBI | CTAG | 3 cut(s) | 60, 80, 357 |
| GsaI | CCCAGC | 1 cut(s) | 411 |
| GsuI | CTGGAG | 1 cut(s) | 672 |
| HaeIII | GGCC | 2 cut(s) | 860, 1087 |
| HapII | CCGG | 1 cut(s) | 384 |
| HgaI | GACGC | 1 cut(s) | 701 |
| Hin1II | CATG | 8 cut(s) | 102, 224, 381, 567, 617, 622, 679, 876 |
| HindIII | AAGCTT | 2 cut(s) | 940, 1111 |
| HinfI | GANTC | 7 cut(s) | 44, 135, 360, 431, 560, 740, 1014 |
| HpaII | CCGG | 1 cut(s) | 384 |
| HphI | GGTGA | 3 cut(s) | 28, 251, 832 |
| Hpy166II | GTNNAC | 3 cut(s) | 258, 266, 454 |
| Hpy188III | TCNNGA | 7 cut(s) | 139, 251, 487, 575, 593, 694, 1127 |
| Hpy8I | GTNNAC | 3 cut(s) | 258, 266, 454 |
| Hpy99I | CGWCG | 1 cut(s) | 215 |
| HpyCH4III | ACNGT | 3 cut(s) | 320, 326, 422 |
| HpyCH4IV | ACGT | 2 cut(s) | 415, 450 |
| HpyCH4V | TGCA | 3 cut(s) | 91, 102, 588 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 609 |
| HpyF3I | CTNAG | 3 cut(s) | 269, 345, 889 |
| HpySE526I | ACGT | 2 cut(s) | 415, 450 |
| Hsp92II | CATG | 8 cut(s) | 102, 224, 381, 567, 617, 622, 679, 876 |
| Kzo9I | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| LmnI | GCTCC | 3 cut(s) | 344, 876, 1070 |
| LweI | GCATC | 1 cut(s) | 508 |
| MabI | ACCWGGT | 1 cut(s) | 392 |
| MaeI | CTAG | 3 cut(s) | 60, 80, 357 |
| MaeII | ACGT | 2 cut(s) | 415, 450 |
| MaeIII | GTNAC | 6 cut(s) | 177, 320, 416, 792, 838, 934 |
| MalI | GATC | 7 cut(s) | 27, 129, 216, 243, 401, 542, 1035 |
| MboI | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| MfeI | CAATTG | 2 cut(s) | 765, 1081 |
| MflI | RGATCY | 3 cut(s) | 25, 127, 540 |
| MhlI | GDGCHC | 1 cut(s) | 1075 |
| MlsI | TGGCCA | 1 cut(s) | 1087 |
| MluCI | AATT | 7 cut(s) | 187, 204, 225, 533, 765, 1081, 1182 |
| MluNI | TGGCCA | 1 cut(s) | 1087 |
| MlyI | GAGTC | 1 cut(s) | 354 |
| MmeI | TCCRAC | 3 cut(s) | 92, 930, 1006 |
| Mox20I | TGGCCA | 1 cut(s) | 1087 |
| MscI | TGGCCA | 1 cut(s) | 1087 |
| MseI | TTAA | 4 cut(s) | 329, 912, 1176, 1189 |
| MslI | CAYNNNNRTG | 1 cut(s) | 993 |
| Msp20I | TGGCCA | 1 cut(s) | 1087 |
| MspA1I | CMGCKG | 2 cut(s) | 237, 755 |
| MspI | CCGG | 1 cut(s) | 384 |
| MspR9I | CCNGG | 2 cut(s) | 394, 515 |
| MunI | CAATTG | 2 cut(s) | 765, 1081 |
| MvaI | CCWGG | 2 cut(s) | 394, 515 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 609 |
| NcoI | CCATGG | 2 cut(s) | 220, 613 |
| NdeII | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| NlaIII | CATG | 8 cut(s) | 102, 224, 381, 567, 617, 622, 679, 876 |
| NlaIV | GGNNCC | 2 cut(s) | 66, 374 |
| NmuCI | GTSAC | 3 cut(s) | 320, 838, 934 |
| NspI | RCATGY | 2 cut(s) | 102, 622 |
| PaeR7I | CTCGAG | 1 cut(s) | 251 |
| PfeI | GAWTC | 6 cut(s) | 44, 135, 431, 560, 740, 1014 |
| PflFI | GACNNNGTC | 1 cut(s) | 73 |
| PinAI | ACCGGT | 1 cut(s) | 383 |
| PleI | GAGTC | 1 cut(s) | 354 |
| PpsI | GAGTC | 1 cut(s) | 354 |
| Ppu21I | YACGTR | 1 cut(s) | 451 |
| PsiI | TTATAA | 3 cut(s) | 201, 1041, 1053 |
| Psp124BI | GAGCTC | 1 cut(s) | 1075 |
| Psp1406I | AACGTT | 1 cut(s) | 415 |
| Psp6I | CCWGG | 2 cut(s) | 392, 513 |
| PspEI | GGTNACC | 1 cut(s) | 838 |
| PspFI | CCCAGC | 1 cut(s) | 407 |
| PspGI | CCWGG | 2 cut(s) | 392, 513 |
| PspN4I | GGNNCC | 2 cut(s) | 66, 374 |
| PsuI | RGATCY | 3 cut(s) | 25, 127, 540 |
| PsyI | GACNNNGTC | 1 cut(s) | 73 |
| RsaI | GTAC | 3 cut(s) | 113, 382, 683 |
| RsaNI | GTAC | 3 cut(s) | 112, 381, 682 |
| RseI | CAYNNNNRTG | 1 cut(s) | 993 |
| SacI | GAGCTC | 1 cut(s) | 1075 |
| SaqAI | TTAA | 4 cut(s) | 329, 912, 1176, 1189 |
| Sau3AI | GATC | 7 cut(s) | 25, 127, 214, 241, 399, 540, 1033 |
| SchI | GAGTC | 1 cut(s) | 354 |
| ScrFI | CCNGG | 2 cut(s) | 394, 515 |
| SduI | GDGCHC | 1 cut(s) | 1075 |
| SexAI | ACCWGGT | 1 cut(s) | 392 |
| SfaNI | GCATC | 1 cut(s) | 508 |
| Sfr274I | CTCGAG | 1 cut(s) | 251 |
| SlaI | CTCGAG | 1 cut(s) | 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 993 |
| SmlI | CTYRAG | 2 cut(s) | 251, 487 |
| SmoI | CTYRAG | 2 cut(s) | 251, 487 |
| SnaBI | TACGTA | 1 cut(s) | 451 |
| Sse9I | AATT | 7 cut(s) | 187, 204, 225, 533, 765, 1081, 1182 |
| SsiI | CCGC | 3 cut(s) | 237, 753, 788 |
| SspI | AATATT | 2 cut(s) | 333, 805 |
| SspMI | CTAG | 3 cut(s) | 60, 80, 357 |
| SstI | GAGCTC | 1 cut(s) | 1075 |
| StyD4I | CCNGG | 2 cut(s) | 392, 513 |
| StyI | CCWWGG | 2 cut(s) | 220, 613 |
| TaaI | ACNGT | 3 cut(s) | 320, 326, 422 |
| TaiI | ACGT | 2 cut(s) | 418, 453 |
| TaqI | TCGA | 1 cut(s) | 252 |
| TasI | AATT | 7 cut(s) | 187, 204, 225, 533, 765, 1081, 1182 |
| TatI | WGTACW | 1 cut(s) | 681 |
| TfiI | GAWTC | 6 cut(s) | 44, 135, 431, 560, 740, 1014 |
| Tru1I | TTAA | 4 cut(s) | 329, 912, 1176, 1189 |
| Tru9I | TTAA | 4 cut(s) | 329, 912, 1176, 1189 |
| TscAI | CASTG | 3 cut(s) | 323, 900, 978 |
| TseFI | GTSAC | 3 cut(s) | 320, 838, 934 |
| Tsp45I | GTSAC | 3 cut(s) | 320, 838, 934 |
| TspDTI | ATGAA | 3 cut(s) | 664, 1014, 1109 |
| TspGWI | ACGGA | 1 cut(s) | 714 |
| TspRI | CASTG | 3 cut(s) | 323, 900, 978 |
| Tth111I | GACNNNGTC | 1 cut(s) | 73 |
| XapI | RAATTY | 2 cut(s) | 225, 533 |
| XceI | RCATGY | 2 cut(s) | 102, 622 |
| XhoI | CTCGAG | 1 cut(s) | 251 |
| XspI | CTAG | 3 cut(s) | 60, 80, 357 |