AT3G22770

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
8047684 .. 8048667
984 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G22770.1

Sequence Viewer

Length: 984 bp
ATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTGATAACAACGTCGTTGAATCATCATCATCATCATCATCATCATGTATAAAACGTGAAGCTAAAGTTATTAGCTTAGGCGACGAAGTTGATGATATATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCAGCATCACCCAAGCCAAGACTAGGCTCGTGGTTTGGAACCCGTATTGGGGGCATACCCGGTCAATCGAGCCCACACATCAGTTCAACAAATTCGACAGCTATTCTTATGCTCTCGGATACGACAAGAGCAGCAAATCCCACAAAATCTTGAGGTGTATTACTTGTTTGAGACCCCATTTTCATGAGTTCATAATCTACGATTTTAACTCTAATTCATGGAGGGTTTTTCATGTCACTCCAGACTGGCAATTAGGGACTATTAATAGTGGCGTGTCTCTCAAGGGAAATGCCTTCTGGGTTGCTGAAGAGAAGTATTACGAAACAAGTGAAACAAACGAAGAGTTTTTCTTACTCTCTTTTGATTTCACAAGAGAGACATTTGGACCACTTTTGCCTCTTCCGTTTCAGTTTGTTGAATCTGAAGATGCTTTGAGTGTATCCAATGTTAGAGACGAGCAGCTTGCTGTTTTATATCAGCCGTGGGATACATTAATGATGGAGATCTGGGTCACGTCTAAGATTGAGCCCAACGCGGTGTCTTGGAACAGCAAGGTGTTCTTATCAGTGAGTATAAGAAAACTCATTGGCCCTCAGTTTCAGTTTTGTTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTTGTTTTTGATAAAGGCTACAGAATACAGCGCTACATAGCTTACATCATTGGAGTGGATGGATCCATGAAAGAAGTGGATCTTGGAGAATCAGACAGAAGGTGTTACCCAATTGTGTGGTCTTATGTTCCAAGTCTAGTGCAACTTAATTAG

Protein Analysis

327

Amino Acids

37.87

Weight (kDa)

5.45

Isoelectric Point (pI)

33.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 1 - 326 2.4e-106 F-box associated beta propeller domain
FBA_3 PF08268 33 - 267 2.8e-10 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 719
AciI CCGC 1 cut(s) 719
AclWI GGATC 3 cut(s) 888, 901, 918
AcsI RAATTY 2 cut(s) 19, 275
AcuI CTGAAG 2 cut(s) 510, 627
AfeI AGCGCT 1 cut(s) 863
AfiI CCNNNNNNNGG 3 cut(s) 207, 232, 233
AgsI TTSAA 3 cut(s) 68, 271, 602
AjiI CACGTC 1 cut(s) 699
AjuI GAANNNNNNNTTGG 2 cut(s) 897, 929
AluBI AGCT 5 cut(s) 110, 123, 285, 646, 872
AluI AGCT 5 cut(s) 110, 123, 285, 646, 872
Alw26I GTCTC 4 cut(s) 349, 465, 554, 630
AlwI GGATC 3 cut(s) 888, 901, 918
Aor51HI AGCGCT 1 cut(s) 863
AoxI GGCC 1 cut(s) 772
ApeKI GCWGC 2 cut(s) 315, 643
ApoI RAATTY 2 cut(s) 19, 275
AseI ATTAAT 2 cut(s) 447, 677
AspLEI GCGC 1 cut(s) 864
AspS9I GGNCC 2 cut(s) 569, 773
AsuC2I CCSGG 1 cut(s) 244
AsuHPI GGTGA 1 cut(s) 184
AvaII GGWCC 1 cut(s) 569
BamHI GGATCC 1 cut(s) 893
BanII GRGCYC 2 cut(s) 258, 714
BauI CACGAG 1 cut(s) 212
BbvI GCAGC 2 cut(s) 327, 655
BccI CCATC 2 cut(s) 676, 884
BceAI ACGGC 1 cut(s) 649
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciVI GTATCC 3 cut(s) 296, 634, 664
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 4 cut(s) 349, 465, 554, 630
BfaI CTAG 2 cut(s) 207, 968
BfmI CTRYAG 1 cut(s) 850
BfoI RGCGCY 1 cut(s) 865
BfuI GTATCC 3 cut(s) 296, 634, 664
BglII AGATCT 1 cut(s) 687
BisI GCNGC 2 cut(s) 316, 644
BlsI GCNGC 2 cut(s) 317, 645
Bme1390I CCNGG 1 cut(s) 244
Bme18I GGWCC 1 cut(s) 569
BmgBI CACGTC 1 cut(s) 699
BmgT120I GGNCC 2 cut(s) 569, 773
BmiI GGNNCC 2 cut(s) 224, 895
BmrFI CCNGG 1 cut(s) 244
BmsI GCATC 3 cut(s) 192, 198, 601
BpmI CTGGAG 1 cut(s) 408
Bpu10I CCTNAGC 1 cut(s) 124
BpuEI CTTGAG 3 cut(s) 135, 355, 449
BpuMI CCSGG 1 cut(s) 244
BsaBI GATNNNNATC 1 cut(s) 686
BsaI GGTCTC 1 cut(s) 349
BsaJI CCNNGG 1 cut(s) 665
Bsc4I CCNNNNNNNGG 3 cut(s) 207, 232, 233
Bse1I ACTGG 1 cut(s) 434
Bse8I GATNNNNATC 1 cut(s) 686
BseDI CCNNGG 1 cut(s) 665
BseGI GGATG 1 cut(s) 895
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 3 cut(s) 207, 232, 233
BseMII CTCAG 1 cut(s) 791
BseNI ACTGG 1 cut(s) 434
BseRI GAGGAG 1 cut(s) 830
BseXI GCAGC 2 cut(s) 327, 655
Bsh1236I CGCG 1 cut(s) 719
BshFI GGCC 1 cut(s) 774
BsiSI CCGG 1 cut(s) 244
BslFI GGGAC 1 cut(s) 454
BslI CCNNNNNNNGG 3 cut(s) 207, 232, 233
BsmAI GTCTC 4 cut(s) 349, 465, 554, 630
BsmBI CGTCTC 1 cut(s) 630
BsmFI GGGAC 1 cut(s) 454
BsnI GGCC 1 cut(s) 774
Bso31I GGTCTC 1 cut(s) 349
Bsp1286I GDGCHC 2 cut(s) 258, 714
Bsp143I GATC 3 cut(s) 687, 893, 910
BspACI CCGC 1 cut(s) 719
BspANI GGCC 1 cut(s) 774
BspCNI CTCAG 1 cut(s) 790
BspFNI CGCG 1 cut(s) 719
BspHI TCATGA 2 cut(s) 9, 367
BspLI GGNNCC 2 cut(s) 224, 895
BspPI GGATC 3 cut(s) 888, 901, 918
BspTNI GGTCTC 1 cut(s) 349
BsrI ACTGG 1 cut(s) 434
BssECI CCNNGG 1 cut(s) 665
BssMI GATC 3 cut(s) 687, 893, 910
BssSI CACGAG 1 cut(s) 212
Bst2BI CACGAG 1 cut(s) 212
Bst4CI ACNGT 1 cut(s) 170
Bst6I CTCTTC 3 cut(s) 486, 519, 588
BstC8I GCNNGC 1 cut(s) 648
BstDEI CTNAG 3 cut(s) 124, 702, 777
BstDSI CCRYGG 1 cut(s) 665
BstF5I GGATG 1 cut(s) 895
BstFNI CGCG 1 cut(s) 719
BstH2I RGCGCY 1 cut(s) 865
BstHHI GCGC 1 cut(s) 864
BstKTI GATC 3 cut(s) 690, 896, 913
BstMAI GTCTC 4 cut(s) 349, 465, 554, 630
BstMBI GATC 3 cut(s) 687, 893, 910
BstSCI CCNGG 1 cut(s) 242
BstSFI CTRYAG 1 cut(s) 850
BstUI CGCG 1 cut(s) 719
BstV1I GCAGC 2 cut(s) 327, 655
BstX2I RGATCY 3 cut(s) 687, 893, 910
BstXI CCANNNNNNTGG 1 cut(s) 948
BstYI RGATCY 3 cut(s) 687, 893, 910
BsuI GTATCC 3 cut(s) 296, 634, 664
BsuRI GGCC 1 cut(s) 774
BtgI CCRYGG 1 cut(s) 665
BtrI CACGTC 1 cut(s) 699
BtsCI GGATG 1 cut(s) 895
BtsI GCAGTG 1 cut(s) 160
BtsIMutI CAGTG 2 cut(s) 160, 756
Cac8I GCNNGC 1 cut(s) 648
CciI TCATGA 2 cut(s) 9, 367
CfoI GCGC 1 cut(s) 864
Cfr13I GGNCC 2 cut(s) 569, 773
CviAII CATG 6 cut(s) 10, 93, 368, 402, 416, 898
DdeI CTNAG 3 cut(s) 124, 702, 777
DpnI GATC 3 cut(s) 689, 895, 912
DpnII GATC 3 cut(s) 687, 893, 910
Eam1104I CTCTTC 3 cut(s) 486, 519, 588
EarI CTCTTC 3 cut(s) 486, 519, 588
Eco24I GRGCYC 2 cut(s) 258, 714
Eco31I GGTCTC 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 569
Eco47III AGCGCT 1 cut(s) 863
Eco57I CTGAAG 2 cut(s) 510, 627
EcoT22I ATGCAT 1 cut(s) 185
EcoT38I GRGCYC 2 cut(s) 258, 714
Esp3I CGTCTC 1 cut(s) 630
FaeI CATG 6 cut(s) 13, 96, 371, 405, 419, 901
FalI AAGNNNNNCTT 4 cut(s) 728, 760, 897, 929
FaqI GGGAC 1 cut(s) 454
FatI CATG 6 cut(s) 9, 92, 367, 401, 415, 897
Fnu4HI GCNGC 2 cut(s) 316, 644
FokI GGATG 1 cut(s) 902
FriOI GRGCYC 2 cut(s) 258, 714
Fsp4HI GCNGC 2 cut(s) 316, 644
FspBI CTAG 2 cut(s) 207, 968
GlaI GCGC 1 cut(s) 863
GluI GCNGC 2 cut(s) 316, 644
GsuI CTGGAG 1 cut(s) 408
HaeII RGCGCY 1 cut(s) 865
HaeIII GGCC 1 cut(s) 774
HapII CCGG 1 cut(s) 244
HhaI GCGC 1 cut(s) 864
Hin1II CATG 6 cut(s) 13, 96, 371, 405, 419, 901
Hin6I GCGC 1 cut(s) 862
HinP1I GCGC 1 cut(s) 862
HinfI GANTC 4 cut(s) 42, 68, 602, 920
HpaII CCGG 1 cut(s) 244
HphI GGTGA 1 cut(s) 184
Hpy188I TCNGA 3 cut(s) 302, 607, 925
Hpy188III TCNNGA 5 cut(s) 10, 50, 334, 368, 425
Hpy99I CGWCG 3 cut(s) 65, 134, 170
HpyAV CCTTC 2 cut(s) 487, 924
HpyCH4III ACNGT 1 cut(s) 170
HpyCH4IV ACGT 3 cut(s) 60, 103, 698
HpyCH4V TGCA 2 cut(s) 183, 973
HpyF3I CTNAG 3 cut(s) 124, 702, 777
HpySE526I ACGT 3 cut(s) 60, 103, 698
Hsp92II CATG 6 cut(s) 13, 96, 371, 405, 419, 901
HspAI GCGC 1 cut(s) 862
Kzo9I GATC 3 cut(s) 687, 893, 910
LpnPI CCDG 5 cut(s) 257, 415, 438, 466, 676
Lsp1109I GCAGC 2 cut(s) 327, 655
LweI GCATC 3 cut(s) 192, 198, 601
MaeI CTAG 2 cut(s) 207, 968
MaeII ACGT 3 cut(s) 60, 103, 698
MaeIII GTNAC 3 cut(s) 418, 694, 935
MalI GATC 3 cut(s) 689, 895, 912
MboI GATC 3 cut(s) 687, 893, 910
MboII GAAGA 6 cut(s) 503, 536, 575, 620, 796, 832
MfeI CAATTG 1 cut(s) 942
MflI RGATCY 3 cut(s) 687, 893, 910
MhlI GDGCHC 2 cut(s) 258, 714
MluCI AATT 6 cut(s) 19, 275, 397, 434, 942, 979
MlyI GAGTC 1 cut(s) 51
MnlI CCTC 5 cut(s) 330, 399, 591, 786, 808
Mph1103I ATGCAT 1 cut(s) 185
MseI TTAA 4 cut(s) 390, 447, 677, 978
MslI CAYNNNNRTG 4 cut(s) 14, 91, 366, 884
MspI CCGG 1 cut(s) 244
MspR9I CCNGG 1 cut(s) 244
MunI CAATTG 1 cut(s) 942
MvnI CGCG 1 cut(s) 719
NciI CCSGG 1 cut(s) 244
NdeII GATC 3 cut(s) 687, 893, 910
NlaIII CATG 6 cut(s) 13, 96, 371, 405, 419, 901
NlaIV GGNNCC 2 cut(s) 224, 895
NmuCI GTSAC 2 cut(s) 418, 694
NsiI ATGCAT 1 cut(s) 185
PagI TCATGA 2 cut(s) 9, 367
PfeI GAWTC 3 cut(s) 68, 602, 920
PkrI GCNGC 2 cut(s) 317, 645
PleI GAGTC 1 cut(s) 50
PpsI GAGTC 1 cut(s) 50
PshBI ATTAAT 2 cut(s) 447, 677
PspN4I GGNNCC 2 cut(s) 224, 895
PspPI GGNCC 2 cut(s) 569, 773
PsuI RGATCY 3 cut(s) 687, 893, 910
RseI CAYNNNNRTG 4 cut(s) 14, 91, 366, 884
SaqAI TTAA 4 cut(s) 390, 447, 677, 978
SatI GCNGC 2 cut(s) 316, 644
Sau3AI GATC 3 cut(s) 687, 893, 910
Sau96I GGNCC 2 cut(s) 569, 773
SchI GAGTC 1 cut(s) 51
ScrFI CCNGG 1 cut(s) 244
SduI GDGCHC 2 cut(s) 258, 714
SfaNI GCATC 3 cut(s) 192, 198, 601
SfcI CTRYAG 1 cut(s) 850
SinI GGWCC 1 cut(s) 569
SmiMI CAYNNNNRTG 4 cut(s) 14, 91, 366, 884
SmlI CTYRAG 3 cut(s) 150, 334, 464
SmoI CTYRAG 3 cut(s) 150, 334, 464
Sse9I AATT 6 cut(s) 19, 275, 397, 434, 942, 979
SsiI CCGC 1 cut(s) 719
SspMI CTAG 2 cut(s) 207, 968
StyD4I CCNGG 1 cut(s) 242
TaaI ACNGT 1 cut(s) 170
TaiI ACGT 3 cut(s) 63, 106, 701
TaqI TCGA 2 cut(s) 252, 279
TasI AATT 6 cut(s) 19, 275, 397, 434, 942, 979
TfiI GAWTC 3 cut(s) 68, 602, 920
Tru1I TTAA 4 cut(s) 390, 447, 677, 978
Tru9I TTAA 4 cut(s) 390, 447, 677, 978
TscAI CASTG 2 cut(s) 167, 756
TseFI GTSAC 2 cut(s) 418, 694
TseI GCWGC 2 cut(s) 315, 643
Tsp45I GTSAC 2 cut(s) 418, 694
TspDTI ATGAA 7 cut(s) 32, 356, 364, 390, 404, 796, 914
TspGWI ACGGA 1 cut(s) 576
TspRI CASTG 2 cut(s) 167, 756
VpaK11BI GGWCC 1 cut(s) 569
VspI ATTAAT 2 cut(s) 447, 677
XapI RAATTY 2 cut(s) 19, 275
XcmI CCANNNNNNNNNTGG 1 cut(s) 904
XspI CTAG 2 cut(s) 207, 968
Zsp2I ATGCAT 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.