AT4G04690

F-box only protein 15

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
2373999 .. 2375135
1137 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G04690.1

Sequence Viewer

Length: 1137 bp
ATGGCTTTCTCTAAGCGTGTGTACCGGTCACTACCATTTGAGTTAGTAGAAGAAATACTTAAGAAGACTCCTGCTGAATCTTTAAACCGATTCAAATCTACGTGCAAGCAATGGTACGGCATCATCACCTCCAAGAGGTTCATGTACAATCACTTGGATCACTCTCCGGAACGATTCATAAGAATCGATGATCATAAGACAGTTCAAATCATGGATCCGATGACCGGAATCTTTTCAGATTCACCAGTCCCAGACGTGTTTCGCTCTCCACATTCGTTTGCTTCTATGGTTCACTGCGATGGACTAATGCTATGTATATGTAGTGATTCGAGTTACGAACGAACAAGAGAGGCCAATCTCGCAGTTTGGAATCCGGTAACGAAGAAAATCAAATGGATCGAACCGTTGGACTCTTACTATGAAACTGATTACTTTGGGATTGGATACGACAACACATGTCGTGAAAACTACAAGATCGTGAGGTTCTCTGGTCCTATGTCCTTTGATGATACAGAGTGCGAGATATATGAGTTTAAGTCTGATTCGTGGAGAACTCTTGATACTAAGTATTGGGATGTATATACTCAGTGCAGAGGTGTGTCAGTGAAGGGTAATATGTATTGGATTGCTGATACTAAAGAGAAGTTTATTCTACGTTTTGATTTCTCCATGGAAACTTTCAAGAACGTATGTGTTTGTCCTCCTATAGGGTGTACTGGACGATTAGGCTGTTTCAGTGGAGATAGACTCCCTTTATTACTACAAGATACAGACTTTGGTGGAGAAGAAGAAGTGTCAACGGACATTGCGGTGTGGCTGACAAACAAGTTGAGTGATGAAGTTGTTTCGTTTACCAAGTATTTTAACGTCACTAGCCCTCATCTTCCGTTGTTACAGTGCCATGGTGATATGGCTCGTCCAGGATACTTCATTGGAGATCACAAAAATATCTTGGCATGGTGCGAGGGAGAAGTAGAGGAAGATGATAAATGGTATACTTGCATCACTCTTTACCAAATTGATCAATGTGGGATCAGAAAGCAAATTGAGACAGGACGACATAGATCGTTTCGCTACCTTGACCCGTTTATTTGTAGCTATGTTTATGTTCCAAGTCTGATTCCAGTTCCAGAATAA

Protein Analysis

378

Amino Acids

44.1

Weight (kDa)

5.4

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 10 - 47 3.8e-08 F-box domain
FBA_1 PF07734 69 - 376 1.4e-74 F-box associated beta propeller domain
FBA_3 PF08268 95 - 230 1.4e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 995
AccIII TCCGGA 1 cut(s) 166
AciI CCGC 1 cut(s) 809
AclWI GGATC 5 cut(s) 165, 209, 222, 404, 1040
AfaI GTAC 4 cut(s) 23, 116, 146, 715
AfiI CCNNNNNNNGG 3 cut(s) 135, 224, 707
AflII CTTAAG 1 cut(s) 59
AflIII ACRYGT 2 cut(s) 255, 455
AgeI ACCGGT 1 cut(s) 24
AgsI TTSAA 3 cut(s) 94, 206, 682
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 1 cut(s) 919
AluBI AGCT 1 cut(s) 1098
AluI AGCT 1 cut(s) 1098
Alw26I GTCTC 1 cut(s) 1043
AlwI GGATC 5 cut(s) 165, 209, 222, 404, 1040
Aor13HI TCCGGA 1 cut(s) 166
AoxI GGCC 1 cut(s) 351
AsiGI ACCGGT 1 cut(s) 24
Asp700I GAANNNNTTC 1 cut(s) 232
AspS9I GGNCC 1 cut(s) 491
AsuHPI GGTGA 3 cut(s) 118, 234, 917
AvaII GGWCC 1 cut(s) 491
BamHI GGATCC 1 cut(s) 214
BbsI GAAGAC 1 cut(s) 71
BccI CCATC 1 cut(s) 293
BceAI ACGGC 1 cut(s) 133
BciT130I CCWGG 1 cut(s) 921
BciVI GTATCC 2 cut(s) 437, 917
BclI TGATCA 2 cut(s) 190, 1021
BcoDI GTCTC 1 cut(s) 1043
BfaI CTAG 1 cut(s) 873
BfmI CTRYAG 1 cut(s) 705
BfrI CTTAAG 1 cut(s) 59
BfuI GTATCC 2 cut(s) 437, 917
Bme1390I CCNGG 1 cut(s) 921
Bme18I GGWCC 1 cut(s) 491
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 1 cut(s) 491
BmiI GGNNCC 1 cut(s) 216
BmrFI CCNGG 1 cut(s) 921
BmsI GCATC 2 cut(s) 129, 1011
BpiI GAAGAC 1 cut(s) 71
BplI GAGNNNNNCTC 2 cut(s) 732, 764
Bsa29I ATCGAT 1 cut(s) 186
BsaAI YACGTR 1 cut(s) 102
BsaBI GATNNNNATC 1 cut(s) 94
BsaJI CCNNGG 2 cut(s) 669, 901
BsaWI WCCGGW 4 cut(s) 24, 166, 224, 373
Bsc4I CCNNNNNNNGG 3 cut(s) 135, 224, 707
Bse118I RCCGGY 1 cut(s) 24
Bse1I ACTGG 3 cut(s) 245, 721, 1124
Bse3DI GCAATG 2 cut(s) 116, 804
Bse8I GATNNNNATC 1 cut(s) 94
BseAI TCCGGA 1 cut(s) 166
BseBI CCWGG 1 cut(s) 921
BseCI ATCGAT 1 cut(s) 186
BseDI CCNNGG 2 cut(s) 669, 901
BseGI GGATG 1 cut(s) 580
BseJI GATNNNNATC 1 cut(s) 94
BseLI CCNNNNNNNGG 3 cut(s) 135, 224, 707
BseMI GCAATG 2 cut(s) 116, 804
BseMII CTCAG 1 cut(s) 599
BseNI ACTGG 3 cut(s) 245, 721, 1124
BsgI GTGCAG 1 cut(s) 610
BshFI GGCC 1 cut(s) 353
BshTI ACCGGT 1 cut(s) 24
BshVI ATCGAT 1 cut(s) 186
BsiSI CCGG 4 cut(s) 25, 167, 225, 374
BslFI GGGAC 1 cut(s) 233
BslI CCNNNNNNNGG 3 cut(s) 135, 224, 707
BsmAI GTCTC 1 cut(s) 1043
BsmFI GGGAC 1 cut(s) 233
BsnI GGCC 1 cut(s) 353
Bsp13I TCCGGA 1 cut(s) 166
Bsp1407I TGTACA 1 cut(s) 144
Bsp143I GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
Bsp19I CCATGG 2 cut(s) 669, 901
BspACI CCGC 1 cut(s) 809
BspANI GGCC 1 cut(s) 353
BspCNI CTCAG 1 cut(s) 598
BspDI ATCGAT 1 cut(s) 186
BspEI TCCGGA 1 cut(s) 166
BspLI GGNNCC 1 cut(s) 216
BspPI GGATC 5 cut(s) 165, 209, 222, 404, 1040
BspTI CTTAAG 1 cut(s) 59
BsrDI GCAATG 2 cut(s) 116, 804
BsrFI RCCGGY 1 cut(s) 24
BsrGI TGTACA 1 cut(s) 144
BsrI ACTGG 3 cut(s) 245, 721, 1124
BssAI RCCGGY 1 cut(s) 24
BssECI CCNNGG 2 cut(s) 669, 901
BssMI GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
BssNAI GTATAC 1 cut(s) 996
BssT1I CCWWGG 2 cut(s) 669, 901
Bst1107I GTATAC 1 cut(s) 996
Bst2UI CCWGG 1 cut(s) 921
Bst4CI ACNGT 3 cut(s) 202, 405, 897
BstAFI CTTAAG 1 cut(s) 59
BstAUI TGTACA 1 cut(s) 144
BstBAI YACGTR 1 cut(s) 102
BstC8I GCNNGC 1 cut(s) 107
BstDEI CTNAG 3 cut(s) 12, 564, 585
BstDSI CCRYGG 2 cut(s) 669, 901
BstENI CCTNNNNNAGG 2 cut(s) 133, 705
BstF5I GGATG 1 cut(s) 580
BstKTI GATC 9 cut(s) 160, 193, 217, 399, 477, 940, 1024, 1035, 1067
BstMAI GTCTC 1 cut(s) 1043
BstMBI GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
BstMWI GCNNNNNNNGC 1 cut(s) 359
BstNI CCWGG 1 cut(s) 921
BstNSI RCATGY 1 cut(s) 459
BstSCI CCNGG 1 cut(s) 919
BstSFI CTRYAG 1 cut(s) 705
BstV2I GAAGAC 1 cut(s) 71
BstX2I RGATCY 1 cut(s) 214
BstYI RGATCY 1 cut(s) 214
BstZ17I GTATAC 1 cut(s) 996
Bsu15I ATCGAT 1 cut(s) 186
BsuI GTATCC 2 cut(s) 437, 917
BsuRI GGCC 1 cut(s) 353
BsuTUI ATCGAT 1 cut(s) 186
BtgI CCRYGG 2 cut(s) 669, 901
BtgZI GCGATG 1 cut(s) 312
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 1 cut(s) 580
BtsI GCAGTG 1 cut(s) 292
BtsIMutI CAGTG 5 cut(s) 292, 593, 609, 742, 902
Cac8I GCNNGC 1 cut(s) 107
Cfr10I RCCGGY 1 cut(s) 24
Cfr13I GGNCC 1 cut(s) 491
ClaI ATCGAT 1 cut(s) 186
Csp6I GTAC 4 cut(s) 22, 115, 145, 714
CspAI ACCGGT 1 cut(s) 24
CviAII CATG 6 cut(s) 142, 211, 456, 670, 902, 957
CviJI RGCY 7 cut(s) 5, 353, 729, 817, 876, 914, 1098
CviKI_1 RGCY 7 cut(s) 5, 353, 729, 817, 876, 914, 1098
CviQI GTAC 4 cut(s) 22, 115, 145, 714
DdeI CTNAG 3 cut(s) 12, 564, 585
DpnI GATC 9 cut(s) 159, 192, 216, 398, 476, 939, 1023, 1034, 1066
DpnII GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
DraI TTTAAA 1 cut(s) 84
Eco130I CCWWGG 2 cut(s) 669, 901
Eco47I GGWCC 1 cut(s) 491
EcoNI CCTNNNNNAGG 2 cut(s) 133, 705
EcoRII CCWGG 1 cut(s) 919
EcoT14I CCWWGG 2 cut(s) 669, 901
ErhI CCWWGG 2 cut(s) 669, 901
FaeI CATG 6 cut(s) 145, 214, 459, 673, 905, 960
FalI AAGNNNNNCTT 2 cut(s) 42, 74
FaqI GGGAC 1 cut(s) 233
FatI CATG 6 cut(s) 141, 210, 455, 669, 901, 956
FbaI TGATCA 2 cut(s) 190, 1021
FblI GTMKAC 1 cut(s) 995
FokI GGATG 1 cut(s) 587
FspBI CTAG 1 cut(s) 873
HaeIII GGCC 1 cut(s) 353
HapII CCGG 4 cut(s) 25, 167, 225, 374
Hin1II CATG 6 cut(s) 145, 214, 459, 673, 905, 960
HincII GTYRAC 1 cut(s) 798
HindII GTYRAC 1 cut(s) 798
HpaII CCGG 4 cut(s) 25, 167, 225, 374
HphI GGTGA 3 cut(s) 118, 234, 917
Hpy166II GTNNAC 6 cut(s) 22, 292, 714, 798, 852, 996
Hpy188I TCNGA 5 cut(s) 219, 238, 541, 1037, 1119
Hpy188III TCNNGA 6 cut(s) 167, 461, 478, 557, 682, 1130
Hpy8I GTNNAC 6 cut(s) 22, 292, 714, 798, 852, 996
HpyAV CCTTC 1 cut(s) 601
HpyCH4III ACNGT 3 cut(s) 202, 405, 897
HpyCH4IV ACGT 5 cut(s) 101, 255, 655, 687, 867
HpyCH4V TGCA 3 cut(s) 105, 591, 1002
HpyF10VI GCNNNNNNNGC 1 cut(s) 359
HpyF3I CTNAG 3 cut(s) 12, 564, 585
HpySE526I ACGT 5 cut(s) 101, 255, 655, 687, 867
Hsp92II CATG 6 cut(s) 145, 214, 459, 673, 905, 960
Kpn2I TCCGGA 1 cut(s) 166
Ksp22I TGATCA 2 cut(s) 190, 1021
Kzo9I GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
LweI GCATC 2 cut(s) 129, 1011
MaeI CTAG 1 cut(s) 873
MaeII ACGT 5 cut(s) 101, 255, 655, 687, 867
MaeIII GTNAC 5 cut(s) 27, 332, 376, 868, 891
MalI GATC 9 cut(s) 159, 192, 216, 398, 476, 939, 1023, 1034, 1066
MboI GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
MboII GAAGA 7 cut(s) 62, 76, 394, 797, 800, 875, 992
MflI RGATCY 1 cut(s) 214
MluCI AATT 2 cut(s) 1017, 1044
MlyI GAGTC 3 cut(s) 61, 404, 741
MmeI TCCRAC 1 cut(s) 387
MnlI CCTC 9 cut(s) 129, 139, 343, 474, 587, 711, 888, 958, 970
MroI TCCGGA 1 cut(s) 166
MroXI GAANNNNTTC 1 cut(s) 232
MseI TTAA 4 cut(s) 60, 83, 534, 864
MslI CAYNNNNRTG 2 cut(s) 297, 809
MspCI CTTAAG 1 cut(s) 59
MspI CCGG 4 cut(s) 25, 167, 225, 374
MspR9I CCNGG 1 cut(s) 921
MvaI CCWGG 1 cut(s) 921
MwoI GCNNNNNNNGC 1 cut(s) 359
NcoI CCATGG 2 cut(s) 669, 901
NdeII GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
NlaIII CATG 6 cut(s) 145, 214, 459, 673, 905, 960
NlaIV GGNNCC 1 cut(s) 216
NmuCI GTSAC 2 cut(s) 27, 868
NspI RCATGY 1 cut(s) 459
PciI ACATGT 1 cut(s) 455
PdmI GAANNNNTTC 1 cut(s) 232
PfoI TCCNGGA 1 cut(s) 919
PinAI ACCGGT 1 cut(s) 24
PleI GAGTC 3 cut(s) 61, 404, 741
PpsI GAGTC 3 cut(s) 61, 404, 741
Ppu21I YACGTR 1 cut(s) 102
PscI ACATGT 1 cut(s) 455
Psp6I CCWGG 1 cut(s) 919
PspGI CCWGG 1 cut(s) 919
PspN4I GGNNCC 1 cut(s) 216
PspPI GGNCC 1 cut(s) 491
PsrI GAACNNNNNNTAC 2 cut(s) 544, 576
PsuI RGATCY 1 cut(s) 214
RsaI GTAC 4 cut(s) 23, 116, 146, 715
RsaNI GTAC 4 cut(s) 22, 115, 145, 714
RseI CAYNNNNRTG 2 cut(s) 297, 809
SaqAI TTAA 4 cut(s) 60, 83, 534, 864
Sau3AI GATC 9 cut(s) 157, 190, 214, 396, 474, 937, 1021, 1032, 1064
Sau96I GGNCC 1 cut(s) 491
SchI GAGTC 3 cut(s) 61, 404, 741
ScrFI CCNGG 1 cut(s) 921
SfaNI GCATC 2 cut(s) 129, 1011
SfcI CTRYAG 1 cut(s) 705
SinI GGWCC 1 cut(s) 491
SmiMI CAYNNNNRTG 2 cut(s) 297, 809
SmlI CTYRAG 1 cut(s) 59
SmoI CTYRAG 1 cut(s) 59
Sse9I AATT 2 cut(s) 1017, 1044
SsiI CCGC 1 cut(s) 809
SspMI CTAG 1 cut(s) 873
StyD4I CCNGG 1 cut(s) 919
StyI CCWWGG 2 cut(s) 669, 901
TaaI ACNGT 3 cut(s) 202, 405, 897
TaiI ACGT 5 cut(s) 104, 258, 658, 690, 870
TaqI TCGA 3 cut(s) 186, 329, 399
TasI AATT 2 cut(s) 1017, 1044
TatI WGTACW 2 cut(s) 144, 713
Tru1I TTAA 4 cut(s) 60, 83, 534, 864
Tru9I TTAA 4 cut(s) 60, 83, 534, 864
TscAI CASTG 5 cut(s) 299, 593, 609, 742, 902
TseFI GTSAC 2 cut(s) 27, 868
Tsp45I GTSAC 2 cut(s) 27, 868
TspDTI ATGAA 5 cut(s) 130, 166, 435, 852, 919
TspGWI ACGGA 2 cut(s) 815, 876
TspRI CASTG 5 cut(s) 299, 593, 609, 742, 902
Vha464I CTTAAG 1 cut(s) 59
VpaK11BI GGWCC 1 cut(s) 491
XagI CCTNNNNNAGG 2 cut(s) 133, 705
XceI RCATGY 1 cut(s) 459
XmiI GTMKAC 1 cut(s) 995
XmnI GAANNNNTTC 1 cut(s) 232
XspI CTAG 1 cut(s) 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.