AT3G03405

peroxiredoxin activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
809875 .. 810795
921 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G03405.1

Sequence Viewer

Length: 582 bp
ATGACGACGATCTCAGATCTTCCAAAGGAATTGGTAGAGGAGATTATCTCTGGGGTTCCTACGAAATTGATGAGAGCAGTTCGAGGAGACAATACTAGGCTTGTGGTTTGGAATCCTTATATCGGGCAAACAAGGTCGATCAAACTCGTGAAGGGATGGGACACGTGCAGTTACGCTTTCGGATGCTTGGAGAAGAATAAAAAATCTTGTCGTAGCCACAAAATCTTGAGGTTTTTAGATGATGACACACTTTACAACGGAAGAGACAACTTTAGATTCAAGTTCTTGAAAGTGAATACGGGACCTGAAGTTTCATTAGTACTTGAGAGTTTCATCATTGACGAAGAGAAGAAAGTCGTCATGGTTAGTGAGGGTTTTAAACACCGAATATCTTACATTCTTGGAGAGAATGGATACTTAAGAGAATTGGATCTAGGAGAATCTATCTACACAAACTGTTGGACACAAGCGTGCTCTTATGTTCCAAGTTTAGTGCAACTCAAGCAACCAGCAGGAGGCAAAAGGAAACTACAAAGCAGAGCGCTGAGACTTGTCGCACTTGATAAGCGAATCAATAAGTAA

Protein Analysis

193

Amino Acids

22.11

Weight (kDa)

9.43

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 30 - 83 1.2e-12 F-box associated beta propeller domain
FBA_1 PF07734 94 - 167 2.3e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 438
AcuI CTGAAG 1 cut(s) 327
AcvI CACGTG 1 cut(s) 165
AfaI GTAC 1 cut(s) 321
AfeI AGCGCT 1 cut(s) 543
AfiI CCNNNNNNNGG 2 cut(s) 122, 515
AflII CTTAAG 1 cut(s) 418
AflIII ACRYGT 1 cut(s) 162
AgsI TTSAA 2 cut(s) 280, 289
AleI CACNNNNGTG 1 cut(s) 469
Alw21I GWGCWC 1 cut(s) 476
Alw26I GTCTC 3 cut(s) 81, 258, 541
AlwI GGATC 1 cut(s) 438
Aor51HI AGCGCT 1 cut(s) 543
AspLEI GCGC 1 cut(s) 544
AspS9I GGNCC 1 cut(s) 302
AvaII GGWCC 1 cut(s) 302
BauI CACGAG 1 cut(s) 146
BbrPI CACGTG 1 cut(s) 165
Bbv12I GWGCWC 1 cut(s) 476
BccI CCATC 1 cut(s) 150
BciVI GTATCC 1 cut(s) 407
BcoDI GTCTC 3 cut(s) 81, 258, 541
BfaI CTAG 2 cut(s) 96, 434
BfoI RGCGCY 1 cut(s) 545
BfrI CTTAAG 1 cut(s) 418
BfuI GTATCC 1 cut(s) 407
BglII AGATCT 1 cut(s) 16
BmcAI AGTACT 1 cut(s) 321
Bme18I GGWCC 1 cut(s) 302
BmgT120I GGNCC 1 cut(s) 302
BmiI GGNNCC 2 cut(s) 57, 303
BmsI GCATC 1 cut(s) 173
BplI GAGNNNNNCTC 2 cut(s) 32, 64
BpuEI CTTGAG 3 cut(s) 247, 344, 485
BsaAI YACGTR 1 cut(s) 165
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 515
BseGI GGATG 2 cut(s) 161, 188
BseLI CCNNNNNNNGG 2 cut(s) 122, 515
BseMII CTCAG 2 cut(s) 27, 536
BseRI GAGGAG 2 cut(s) 53, 99
BsgI GTGCAG 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 476
BslFI GGGAC 2 cut(s) 173, 315
BslI CCNNNNNNNGG 2 cut(s) 122, 515
BsmAI GTCTC 3 cut(s) 81, 258, 541
BsmFI GGGAC 2 cut(s) 173, 315
Bsp1286I GDGCHC 1 cut(s) 476
Bsp143I GATC 4 cut(s) 9, 16, 138, 430
BspCNI CTCAG 2 cut(s) 26, 537
BspLI GGNNCC 2 cut(s) 57, 303
BspPI GGATC 1 cut(s) 438
BspTI CTTAAG 1 cut(s) 418
BssMI GATC 4 cut(s) 9, 16, 138, 430
BssSI CACGAG 1 cut(s) 146
Bst2BI CACGAG 1 cut(s) 146
Bst4CI ACNGT 1 cut(s) 458
Bst6I CTCTTC 2 cut(s) 256, 339
BstAFI CTTAAG 1 cut(s) 418
BstBAI YACGTR 1 cut(s) 165
BstC8I GCNNGC 1 cut(s) 472
BstDEI CTNAG 2 cut(s) 13, 545
BstF5I GGATG 2 cut(s) 161, 188
BstH2I RGCGCY 1 cut(s) 545
BstHHI GCGC 1 cut(s) 544
BstKTI GATC 4 cut(s) 12, 19, 141, 433
BstMAI GTCTC 3 cut(s) 81, 258, 541
BstMBI GATC 4 cut(s) 9, 16, 138, 430
BstMWI GCNNNNNNNGC 1 cut(s) 502
BstX2I RGATCY 2 cut(s) 16, 430
BstYI RGATCY 2 cut(s) 16, 430
BsuI GTATCC 1 cut(s) 407
BtsCI GGATG 2 cut(s) 161, 188
Cac8I GCNNGC 1 cut(s) 472
CfoI GCGC 1 cut(s) 544
Cfr13I GGNCC 1 cut(s) 302
Csp6I GTAC 1 cut(s) 320
CviAII CATG 1 cut(s) 361
CviJI RGCY 2 cut(s) 100, 216
CviKI_1 RGCY 2 cut(s) 100, 216
CviQI GTAC 1 cut(s) 320
DdeI CTNAG 2 cut(s) 13, 545
DpnI GATC 4 cut(s) 11, 18, 140, 432
DpnII GATC 4 cut(s) 9, 16, 138, 430
DraI TTTAAA 1 cut(s) 379
Eam1104I CTCTTC 2 cut(s) 256, 339
EarI CTCTTC 2 cut(s) 256, 339
Eco47I GGWCC 1 cut(s) 302
Eco47III AGCGCT 1 cut(s) 543
Eco57I CTGAAG 1 cut(s) 327
Eco72I CACGTG 1 cut(s) 165
EcoO109I RGGNCCY 1 cut(s) 302
FaeI CATG 1 cut(s) 364
FaiI YATR 3 cut(s) 120, 362, 480
FaqI GGGAC 2 cut(s) 173, 315
FatI CATG 1 cut(s) 360
FokI GGATG 2 cut(s) 168, 195
FspBI CTAG 2 cut(s) 96, 434
GlaI GCGC 1 cut(s) 543
HaeII RGCGCY 1 cut(s) 545
HhaI GCGC 1 cut(s) 544
Hin1II CATG 1 cut(s) 364
Hin6I GCGC 1 cut(s) 542
HinP1I GCGC 1 cut(s) 542
HinfI GANTC 4 cut(s) 112, 276, 440, 570
Hpy188I TCNGA 2 cut(s) 16, 182
Hpy188III TCNNGA 3 cut(s) 148, 226, 286
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 1 cut(s) 145
HpyCH4III ACNGT 1 cut(s) 458
HpyCH4IV ACGT 1 cut(s) 164
HpyCH4V TGCA 2 cut(s) 168, 496
HpyF10VI GCNNNNNNNGC 1 cut(s) 502
HpyF3I CTNAG 2 cut(s) 13, 545
HpySE526I ACGT 1 cut(s) 164
Hsp92II CATG 1 cut(s) 364
HspAI GCGC 1 cut(s) 542
Kzo9I GATC 4 cut(s) 9, 16, 138, 430
LpnPI CCDG 4 cut(s) 36, 318, 498, 522
LweI GCATC 1 cut(s) 173
MaeI CTAG 2 cut(s) 96, 434
MaeII ACGT 1 cut(s) 164
MaeIII GTNAC 1 cut(s) 170
MalI GATC 4 cut(s) 11, 18, 140, 432
MboI GATC 4 cut(s) 9, 16, 138, 430
MboII GAAGA 5 cut(s) 11, 205, 273, 356, 361
MflI RGATCY 2 cut(s) 16, 430
MhlI GDGCHC 1 cut(s) 476
MluCI AATT 3 cut(s) 29, 65, 425
MmeI TCCRAC 1 cut(s) 440
MnlI CCTC 5 cut(s) 31, 77, 222, 364, 509
MseI TTAA 2 cut(s) 378, 419
MslI CAYNNNNRTG 1 cut(s) 469
MspCI CTTAAG 1 cut(s) 418
MwoI GCNNNNNNNGC 1 cut(s) 502
NdeII GATC 4 cut(s) 9, 16, 138, 430
NlaIII CATG 1 cut(s) 364
NlaIV GGNNCC 2 cut(s) 57, 303
OliI CACNNNNGTG 1 cut(s) 469
PfeI GAWTC 4 cut(s) 112, 276, 440, 570
PmaCI CACGTG 1 cut(s) 165
PmlI CACGTG 1 cut(s) 165
Ppu21I YACGTR 1 cut(s) 165
PpuMI RGGWCCY 1 cut(s) 302
Psp5II RGGWCCY 1 cut(s) 302
PspCI CACGTG 1 cut(s) 165
PspN4I GGNNCC 2 cut(s) 57, 303
PspPI GGNCC 1 cut(s) 302
PspPPI RGGWCCY 1 cut(s) 302
PsuI RGATCY 2 cut(s) 16, 430
RsaI GTAC 1 cut(s) 321
RsaNI GTAC 1 cut(s) 320
RseI CAYNNNNRTG 1 cut(s) 469
SaqAI TTAA 2 cut(s) 378, 419
Sau3AI GATC 4 cut(s) 9, 16, 138, 430
Sau96I GGNCC 1 cut(s) 302
ScaI AGTACT 1 cut(s) 321
SduI GDGCHC 1 cut(s) 476
SetI ASST 4 cut(s) 137, 167, 233, 307
SfaNI GCATC 1 cut(s) 173
SinI GGWCC 1 cut(s) 302
SmiMI CAYNNNNRTG 1 cut(s) 469
SmlI CTYRAG 4 cut(s) 226, 323, 418, 500
SmoI CTYRAG 4 cut(s) 226, 323, 418, 500
Sse9I AATT 3 cut(s) 29, 65, 425
SspMI CTAG 2 cut(s) 96, 434
TaaI ACNGT 1 cut(s) 458
TaiI ACGT 1 cut(s) 167
TaqI TCGA 2 cut(s) 82, 137
TasI AATT 3 cut(s) 29, 65, 425
TatI WGTACW 1 cut(s) 319
TfiI GAWTC 4 cut(s) 112, 276, 440, 570
Tru1I TTAA 2 cut(s) 378, 419
Tru9I TTAA 2 cut(s) 378, 419
TspDTI ATGAA 2 cut(s) 303, 322
TspGWI ACGGA 1 cut(s) 273
Vha464I CTTAAG 1 cut(s) 418
VpaK11BI GGWCC 1 cut(s) 302
XspI CTAG 2 cut(s) 96, 434
ZrmI AGTACT 1 cut(s) 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.