A Receptor for Ubiquitination Targets
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 179, 454 |
| AclI | AACGTT | 1 cut(s) | 267 |
| AclWI | GGATC | 1 cut(s) | 441 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 417 |
| AgsI | TTSAA | 1 cut(s) | 272 |
| Alw21I | GWGCWC | 1 cut(s) | 60 |
| AlwI | GGATC | 1 cut(s) | 441 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 1 cut(s) | 364 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BauI | CACGAG | 1 cut(s) | 36 |
| Bbv12I | GWGCWC | 1 cut(s) | 60 |
| BccI | CCATC | 1 cut(s) | 314 |
| BceAI | ACGGC | 1 cut(s) | 192 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 84, 118 |
| BfaI | CTAG | 2 cut(s) | 63, 216 |
| BfmI | CTRYAG | 1 cut(s) | 279 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 3 cut(s) | 68, 116, 408 |
| BmsI | GCATC | 1 cut(s) | 86 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 417 |
| Bse1I | ACTGG | 1 cut(s) | 70 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 417 |
| BseNI | ACTGG | 1 cut(s) | 70 |
| BsiHKAI | GWGCWC | 1 cut(s) | 60 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 417 |
| Bsp1286I | GDGCHC | 1 cut(s) | 60 |
| Bsp143I | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| BspACI | CCGC | 2 cut(s) | 179, 454 |
| BspHI | TCATGA | 1 cut(s) | 201 |
| BspLI | GGNNCC | 3 cut(s) | 68, 116, 408 |
| BspPI | GGATC | 1 cut(s) | 441 |
| BsrI | ACTGG | 1 cut(s) | 70 |
| BssMI | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| BssSI | CACGAG | 1 cut(s) | 36 |
| Bst2BI | CACGAG | 1 cut(s) | 36 |
| Bst4CI | ACNGT | 1 cut(s) | 119 |
| Bst6I | CTCTTC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 1 cut(s) | 83 |
| BstKTI | GATC | 5 cut(s) | 31, 170, 201, 252, 436 |
| BstMBI | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| BstSFI | CTRYAG | 1 cut(s) | 279 |
| BtgZI | GCGATG | 1 cut(s) | 35 |
| BtsI | GCAGTG | 1 cut(s) | 96 |
| BtsIMutI | CAGTG | 1 cut(s) | 96 |
| CciI | TCATGA | 1 cut(s) | 201 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CseI | GACGC | 2 cut(s) | 323, 328 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 24, 59, 411, 446 |
| CviAII | CATG | 1 cut(s) | 202 |
| CviJI | RGCY | 1 cut(s) | 395 |
| CviKI_1 | RGCY | 1 cut(s) | 395 |
| DdeI | CTNAG | 1 cut(s) | 83 |
| DpnI | GATC | 5 cut(s) | 30, 169, 200, 251, 435 |
| DpnII | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| Eam1104I | CTCTTC | 1 cut(s) | 42 |
| EarI | CTCTTC | 1 cut(s) | 42 |
| EciI | GGCGGA | 1 cut(s) | 194 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| FaeI | CATG | 1 cut(s) | 205 |
| FaiI | YATR | 7 cut(s) | 153, 203, 223, 281, 332, 351, 367 |
| FatI | CATG | 1 cut(s) | 201 |
| FspBI | CTAG | 2 cut(s) | 63, 216 |
| HgaI | GACGC | 2 cut(s) | 323, 328 |
| Hin1II | CATG | 1 cut(s) | 205 |
| HinfI | GANTC | 3 cut(s) | 212, 272, 324 |
| HphI | GGTGA | 1 cut(s) | 364 |
| Hpy166II | GTNNAC | 3 cut(s) | 296, 310, 346 |
| Hpy188I | TCNGA | 1 cut(s) | 28 |
| Hpy188III | TCNNGA | 2 cut(s) | 165, 202 |
| Hpy8I | GTNNAC | 3 cut(s) | 296, 310, 346 |
| Hpy99I | CGWCG | 3 cut(s) | 123, 317, 344 |
| HpyAV | CCTTC | 1 cut(s) | 385 |
| HpyCH4III | ACNGT | 1 cut(s) | 119 |
| HpyCH4IV | ACGT | 1 cut(s) | 267 |
| HpyCH4V | TGCA | 1 cut(s) | 105 |
| HpyF3I | CTNAG | 1 cut(s) | 83 |
| HpySE526I | ACGT | 1 cut(s) | 267 |
| Hsp92II | CATG | 1 cut(s) | 205 |
| Kzo9I | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| LpnPI | CCDG | 1 cut(s) | 83 |
| LweI | GCATC | 1 cut(s) | 86 |
| MaeI | CTAG | 2 cut(s) | 63, 216 |
| MaeII | ACGT | 1 cut(s) | 267 |
| MalI | GATC | 5 cut(s) | 30, 169, 200, 251, 435 |
| MboI | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| MboII | GAAGA | 2 cut(s) | 23, 59 |
| MhlI | GDGCHC | 1 cut(s) | 60 |
| MlyI | GAGTC | 1 cut(s) | 333 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| MnlI | CCTC | 2 cut(s) | 43, 380 |
| MseI | TTAA | 1 cut(s) | 11 |
| MslI | CAYNNNNRTG | 1 cut(s) | 351 |
| NdeII | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| NlaIII | CATG | 1 cut(s) | 205 |
| NlaIV | GGNNCC | 3 cut(s) | 68, 116, 408 |
| PagI | TCATGA | 1 cut(s) | 201 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 264 |
| PfeI | GAWTC | 2 cut(s) | 212, 272 |
| PleI | GAGTC | 1 cut(s) | 332 |
| PpsI | GAGTC | 1 cut(s) | 332 |
| Psp1406I | AACGTT | 1 cut(s) | 267 |
| PspN4I | GGNNCC | 3 cut(s) | 68, 116, 408 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| RseI | CAYNNNNRTG | 1 cut(s) | 351 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| Sau3AI | GATC | 5 cut(s) | 28, 167, 198, 249, 433 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SchI | GAGTC | 1 cut(s) | 333 |
| SduI | GDGCHC | 1 cut(s) | 60 |
| SetI | ASST | 3 cut(s) | 270, 295, 432 |
| SfaNI | GCATC | 1 cut(s) | 86 |
| SfcI | CTRYAG | 1 cut(s) | 279 |
| SinI | GGWCC | 1 cut(s) | 67 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 351 |
| SsiI | CCGC | 2 cut(s) | 179, 454 |
| SspMI | CTAG | 2 cut(s) | 63, 216 |
| TaaI | ACNGT | 1 cut(s) | 119 |
| TaiI | ACGT | 1 cut(s) | 270 |
| TaqI | TCGA | 3 cut(s) | 252, 327, 436 |
| TfiI | GAWTC | 2 cut(s) | 212, 272 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TscAI | CASTG | 1 cut(s) | 96 |
| TspDTI | ATGAA | 1 cut(s) | 245 |
| TspRI | CASTG | 1 cut(s) | 96 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| XspI | CTAG | 2 cut(s) | 63, 216 |