AT4G10740

peroxiredoxin activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
6617143 .. 6618426
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G10740.1

Sequence Viewer

Length: 1284 bp
ATGAGGACGACAATGTCAAATCTTCCAAAGGAACTAGTAGAGGACATTGTCTCTAGGGTTCCTTTACATTGTTTGAGAGCAATGCGATTAACTTGCAAAAACTGGAATGCTTTGTTAGAAAGCCAGAGCTTTAAGAAGATGCACATACGGAAAGAAGAAGAAGCAGCAAGGGAATTAGGAGAGAATCGAATGATTGTGATGATGGATTACAACGTTTATTTAATGGGCATCATCGTCAACGAAAACCTATCCATAAAGTCTCTAGGTAAACTTACTTGCCTACATGGTTCTAAACAAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACGATGATACTAAGATTGTGGTTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCAGAAAGTATCACCGTACAAGTGAATGGGAAGGACGAGATGTTTATAACTATGCTCTCCGATACGAAACTAACAGTGGAAACCGTAGCCCCAAAATCTTGAGGTTTATAGATGATTTCCATCACCACCCCGAAAACCCCGCTTTACGATATGAAACCTACGATTTTGATACTGATTTATGGACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTCGCTGTGGTGGTGTTTCTCTTAATGGAAACACTTATTGGGGCGCTGTAGAACGAAACGCATCTGCATATATTGGTCATATGATCTGCTTTGATTTTACAAGAGGAGGATTTGGACCGCTTATACCTCTGCCGTTTAAGGCTAGGGGTTTAGTTTTTGCGCCACTATCTTCGGATAGAGCAGAGAAGATCGCGGCTTTATTTCGGACAAGCAAAAAGGTTGTGATATGGATTACGACTAAGATTGATGCCACAAATGTAACTTGGAGCAATTTCTTCACAATATATATATCGAACCTTGAGCGAAATCTTTCATGTAAGAGTTTCTTCACAATATATATATCGAACCTTGAGCGAAATCTTTCATGTAAGAGTTTCTTCATTGACATGGAGAAGAAAGTTGCTATGGTTTTTGATAAAGAAAAAGGAAAAAAAGTCGCTCACAACATTATTAATATCATTGGAGAGGCTGGATGCGTGAGGAAATTGGTTCTTAAAGAATCTGGAGACAAAAGCTGTTGGCCACTTGTGTGCTCTTATGTTCCAAGTACAGTGCAAATCAAGCAACATAATAGAGGCAAAAGGCAAAAAAAAGTGATTAGGAAAGGCATCGACATTGATATGAGACATGATAAACGTATCAAGGTTGATTAG

Protein Analysis

427

Amino Acids

49.41

Weight (kDa)

9.45

Isoelectric Point (pI)

30.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 46 3.6e-08 F-box domain
FBA_1 PF07734 63 - 397 1.8e-97 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 459
AasI GACNNNNNNGTC 1 cut(s) 13
AccII CGCG 1 cut(s) 824
AciI CCGC 4 cut(s) 552, 622, 749, 824
AclI AACGTT 1 cut(s) 213
AclWI GGATC 2 cut(s) 400, 413
AcoI YGGCCR 1 cut(s) 1151
AfaI GTAC 2 cut(s) 430, 1180
AfiI CCNNNNNNNGG 1 cut(s) 389
AgsI TTSAA 1 cut(s) 379
AhlI ACTAGT 1 cut(s) 34
AjuI GAANNNNNNNTTGG 4 cut(s) 371, 403, 652, 684
AleI CACNNNNGTG 1 cut(s) 1159
AluBI AGCT 2 cut(s) 129, 1146
AluI AGCT 2 cut(s) 129, 1146
Alw21I GWGCWC 1 cut(s) 1166
Alw26I GTCTC 5 cut(s) 55, 264, 613, 1131, 1249
AlwI GGATC 2 cut(s) 400, 413
AoxI GGCC 1 cut(s) 1151
ApeKI GCWGC 1 cut(s) 164
AseI ATTAAT 1 cut(s) 1083
Asp700I GAANNNNTTC 2 cut(s) 940, 991
AspLEI GCGC 2 cut(s) 677, 793
AspS9I GGNCC 1 cut(s) 746
AsuHPI GGTGA 2 cut(s) 416, 527
AvaII GGWCC 1 cut(s) 746
BalI TGGCCA 1 cut(s) 1153
BamHI GGATCC 1 cut(s) 405
Bbv12I GWGCWC 1 cut(s) 1166
BbvI GCAGC 1 cut(s) 176
BccI CCATC 2 cut(s) 196, 540
BceAI ACGGC 1 cut(s) 748
BcgI CGANNNNNNTGC 2 cut(s) 75, 109
BcoDI GTCTC 5 cut(s) 55, 264, 613, 1131, 1249
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 4 cut(s) 35, 54, 263, 774
BfmI CTRYAG 1 cut(s) 678
BfoI RGCGCY 1 cut(s) 678
BisI GCNGC 2 cut(s) 165, 825
BlsI GCNGC 2 cut(s) 166, 826
Bme18I GGWCC 1 cut(s) 746
BmgT120I GGNCC 1 cut(s) 746
BmiI GGNNCC 2 cut(s) 60, 407
BmsI GCATC 7 cut(s) 129, 237, 351, 701, 868, 1094, 1248
BpmI CTGGAG 1 cut(s) 1155
BpuEI CTTGAG 4 cut(s) 294, 532, 950, 1001
BsaBI GATNNNNATC 1 cut(s) 531
Bsc4I CCNNNNNNNGG 1 cut(s) 389
Bse1I ACTGG 2 cut(s) 107, 623
Bse3DI GCAATG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 531
BseGI GGATG 1 cut(s) 1109
BseJI GATNNNNATC 1 cut(s) 531
BseLI CCNNNNNNNGG 1 cut(s) 389
BseMI GCAATG 1 cut(s) 87
BseNI ACTGG 2 cut(s) 107, 623
BseRI GAGGAG 1 cut(s) 750
BseXI GCAGC 1 cut(s) 176
Bsh1236I CGCG 1 cut(s) 824
BshFI GGCC 1 cut(s) 1153
BsiHKAI GWGCWC 1 cut(s) 1166
BslI CCNNNNNNNGG 1 cut(s) 389
BsmAI GTCTC 5 cut(s) 55, 264, 613, 1131, 1249
BsmI GAATGC 1 cut(s) 112
BsnI GGCC 1 cut(s) 1153
Bsp1286I GDGCHC 1 cut(s) 1166
Bsp143I GATC 3 cut(s) 405, 714, 819
BspACI CCGC 4 cut(s) 552, 622, 749, 824
BspANI GGCC 1 cut(s) 1153
BspFNI CGCG 1 cut(s) 824
BspLI GGNNCC 2 cut(s) 60, 407
BspPI GGATC 2 cut(s) 400, 413
BsrDI GCAATG 1 cut(s) 87
BsrI ACTGG 2 cut(s) 107, 623
BssMI GATC 3 cut(s) 405, 714, 819
Bst4CI ACNGT 4 cut(s) 428, 488, 497, 1183
BstDEI CTNAG 2 cut(s) 363, 870
BstF5I GGATG 1 cut(s) 1109
BstFNI CGCG 1 cut(s) 824
BstH2I RGCGCY 1 cut(s) 678
BstHHI GCGC 2 cut(s) 677, 793
BstKTI GATC 3 cut(s) 408, 717, 822
BstMAI GTCTC 5 cut(s) 55, 264, 613, 1131, 1249
BstMBI GATC 3 cut(s) 405, 714, 819
BstMWI GCNNNNNNNGC 1 cut(s) 1192
BstSFI CTRYAG 1 cut(s) 678
BstUI CGCG 1 cut(s) 824
BstV1I GCAGC 1 cut(s) 176
BstX2I RGATCY 1 cut(s) 405
BstYI RGATCY 1 cut(s) 405
BsuRI GGCC 1 cut(s) 1153
BtsCI GGATG 1 cut(s) 1109
BtsIMutI CAGTG 3 cut(s) 493, 616, 1188
CfoI GCGC 2 cut(s) 677, 793
Cfr13I GGNCC 1 cut(s) 746
Csp6I GTAC 2 cut(s) 429, 1179
CspCI CAANNNNNGTGG 2 cut(s) 383, 418
CviAII CATG 5 cut(s) 284, 945, 996, 1018, 1259
CviJI RGCY 8 cut(s) 123, 129, 501, 773, 827, 1100, 1146, 1153
CviKI_1 RGCY 8 cut(s) 123, 129, 501, 773, 827, 1100, 1146, 1153
CviQI GTAC 2 cut(s) 429, 1179
DdeI CTNAG 2 cut(s) 363, 870
DpnI GATC 3 cut(s) 407, 716, 821
DpnII GATC 3 cut(s) 405, 714, 819
DrdI GACNNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 1 cut(s) 13
EaeI YGGCCR 1 cut(s) 1151
EciI GGCGGA 1 cut(s) 637
Eco32I GATATC 1 cut(s) 306
Eco47I GGWCC 1 cut(s) 746
EcoRV GATATC 1 cut(s) 306
EcoT22I ATGCAT 1 cut(s) 344
FaeI CATG 5 cut(s) 287, 948, 999, 1021, 1262
FalI AAGNNNNNCTT 4 cut(s) 941, 973, 992, 1024
FatI CATG 5 cut(s) 283, 944, 995, 1017, 1258
FauI CCCGC 1 cut(s) 559
FauNDI CATATG 1 cut(s) 711
Fnu4HI GCNGC 2 cut(s) 165, 825
FokI GGATG 1 cut(s) 1116
Fsp4HI GCNGC 2 cut(s) 165, 825
FspBI CTAG 4 cut(s) 35, 54, 263, 774
GlaI GCGC 2 cut(s) 676, 792
GluI GCNGC 2 cut(s) 165, 825
GsuI CTGGAG 1 cut(s) 1155
HaeII RGCGCY 1 cut(s) 678
HaeIII GGCC 1 cut(s) 1153
HhaI GCGC 2 cut(s) 677, 793
Hin1II CATG 5 cut(s) 287, 948, 999, 1021, 1262
Hin6I GCGC 2 cut(s) 675, 791
HinP1I GCGC 2 cut(s) 675, 791
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HinfI GANTC 3 cut(s) 184, 379, 1130
HphI GGTGA 2 cut(s) 416, 527
Hpy166II GTNNAC 2 cut(s) 238, 269
Hpy188I TCNGA 3 cut(s) 473, 805, 837
Hpy188III TCNNGA 4 cut(s) 301, 511, 602, 1134
Hpy8I GTNNAC 2 cut(s) 238, 269
HpyAV CCTTC 1 cut(s) 437
HpyCH4III ACNGT 4 cut(s) 428, 488, 497, 1183
HpyCH4IV ACGT 2 cut(s) 213, 1267
HpyCH4V TGCA 5 cut(s) 96, 142, 342, 698, 1186
HpyF10VI GCNNNNNNNGC 1 cut(s) 1192
HpyF3I CTNAG 2 cut(s) 363, 870
HpySE526I ACGT 2 cut(s) 213, 1267
Hsp92II CATG 5 cut(s) 287, 948, 999, 1021, 1262
HspAI GCGC 2 cut(s) 675, 791
Kzo9I GATC 3 cut(s) 405, 714, 819
LmnI GCTCC 1 cut(s) 897
LpnPI CCDG 6 cut(s) 88, 137, 427, 604, 1086, 1119
Lsp1109I GCAGC 1 cut(s) 176
LweI GCATC 7 cut(s) 129, 237, 351, 701, 868, 1094, 1248
MaeI CTAG 4 cut(s) 35, 54, 263, 774
MaeII ACGT 2 cut(s) 213, 1267
MaeIII GTNAC 1 cut(s) 889
MalI GATC 3 cut(s) 407, 716, 821
MboI GATC 3 cut(s) 405, 714, 819
MflI RGATCY 1 cut(s) 405
MhlI GDGCHC 1 cut(s) 1166
MlsI TGGCCA 1 cut(s) 1153
MluCI AATT 3 cut(s) 173, 901, 1115
MluNI TGGCCA 1 cut(s) 1153
MnlI CCTC 9 cut(s) 34, 319, 507, 728, 731, 768, 1090, 1104, 1199
Mox20I TGGCCA 1 cut(s) 1153
Mph1103I ATGCAT 1 cut(s) 344
MroXI GAANNNNTTC 2 cut(s) 940, 991
MscI TGGCCA 1 cut(s) 1153
MseI TTAA 8 cut(s) 89, 132, 221, 347, 654, 768, 1083, 1125
MslI CAYNNNNRTG 3 cut(s) 1016, 1159, 1250
Msp20I TGGCCA 1 cut(s) 1153
Mva1269I GAATGC 1 cut(s) 112
MvnI CGCG 1 cut(s) 824
MwoI GCNNNNNNNGC 1 cut(s) 1192
NdeI CATATG 1 cut(s) 711
NdeII GATC 3 cut(s) 405, 714, 819
NlaIII CATG 5 cut(s) 287, 948, 999, 1021, 1262
NlaIV GGNNCC 2 cut(s) 60, 407
NsiI ATGCAT 1 cut(s) 344
OliI CACNNNNGTG 1 cut(s) 1159
PctI GAATGC 1 cut(s) 112
PdmI GAANNNNTTC 2 cut(s) 940, 991
PfeI GAWTC 3 cut(s) 184, 379, 1130
PflFI GACNNNGTC 2 cut(s) 13, 47
PkrI GCNGC 2 cut(s) 166, 826
PshBI ATTAAT 1 cut(s) 1083
PsiI TTATAA 1 cut(s) 459
Psp1406I AACGTT 1 cut(s) 213
PspN4I GGNNCC 2 cut(s) 60, 407
PspPI GGNCC 1 cut(s) 746
PsuI RGATCY 1 cut(s) 405
PsyI GACNNNGTC 2 cut(s) 13, 47
RsaI GTAC 2 cut(s) 430, 1180
RsaNI GTAC 2 cut(s) 429, 1179
RseI CAYNNNNRTG 3 cut(s) 1016, 1159, 1250
SaqAI TTAA 8 cut(s) 89, 132, 221, 347, 654, 768, 1083, 1125
SatI GCNGC 2 cut(s) 165, 825
Sau3AI GATC 3 cut(s) 405, 714, 819
Sau96I GGNCC 1 cut(s) 746
SduI GDGCHC 1 cut(s) 1166
SfaNI GCATC 7 cut(s) 129, 237, 351, 701, 868, 1094, 1248
SfcI CTRYAG 1 cut(s) 678
SinI GGWCC 1 cut(s) 746
SmiMI CAYNNNNRTG 3 cut(s) 1016, 1159, 1250
SmlI CTYRAG 4 cut(s) 309, 511, 929, 980
SmoI CTYRAG 4 cut(s) 309, 511, 929, 980
SpeI ACTAGT 1 cut(s) 34
Sse9I AATT 3 cut(s) 173, 901, 1115
SsiI CCGC 4 cut(s) 552, 622, 749, 824
SspMI CTAG 4 cut(s) 35, 54, 263, 774
TaaI ACNGT 4 cut(s) 428, 488, 497, 1183
TaiI ACGT 2 cut(s) 216, 1270
TaqI TCGA 4 cut(s) 187, 923, 974, 1242
TasI AATT 3 cut(s) 173, 901, 1115
TatI WGTACW 1 cut(s) 1178
TauI GCSGC 1 cut(s) 827
TfiI GAWTC 3 cut(s) 184, 379, 1130
Tru1I TTAA 8 cut(s) 89, 132, 221, 347, 654, 768, 1083, 1125
Tru9I TTAA 8 cut(s) 89, 132, 221, 347, 654, 768, 1083, 1125
TscAI CASTG 3 cut(s) 493, 623, 1188
TseI GCWGC 1 cut(s) 164
TspDTI ATGAA 5 cut(s) 308, 579, 933, 984, 1000
TspGWI ACGGA 2 cut(s) 163, 372
TspRI CASTG 3 cut(s) 493, 623, 1188
Tth111I GACNNNGTC 2 cut(s) 13, 47
VpaK11BI GGWCC 1 cut(s) 746
VspI ATTAAT 1 cut(s) 1083
XmnI GAANNNNTTC 2 cut(s) 940, 991
XspI CTAG 4 cut(s) 35, 54, 263, 774
Zsp2I ATGCAT 1 cut(s) 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.