AT3G08750

F-box only protein 15

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
2656716 .. 2657825
1110 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G08750.1

Sequence Viewer

Length: 1110 bp
ATGGCTTCCTCAAAGTGTTTGTTGTTGCCGTCGCTACCATTTGAGTTGATAGAAGAAATACTTTACAAGATTCCCGCCGAATCCTTGATCCGATTCAAATCGACGTGCAAGAAATGGTACAATCTCATCACCGAGAAGAGATTCATGTACAATCACTTGGATCACTACTCACCGGAACGATTCATAAGAACCTATGACCAACAGATCATTGATCCGGTGACCGAAATCCTCTCAGACGCACTAATCCCGGACGAGTTTCGCGATTTGTATCCGATTTATTCCATGGTTCACTGTGATGGACTAATGCTGTGTACGTGTCGAAAATGGGACAACAGTCTCGCAGTTTGGAATCCGGTTTTGAGGGAAATTAAATGGATCAAACCGTCGGTTTGTTACTTGCACACTGATTACGTTGGGATTGGATACGACGACAATGTATCTCGTGATAACTACAAAATCTTGAAGCTTCTTGGTCGTTTGCCTAAGGATGATGATTCAGATCCAAACTGTGAGATCTATGAATTCAAGTCTGATTCATGGAAAACTCTTGTTGCTAAGTTTGACTGGGATATAGATATTAGGTGCAACAACGGTGTGTCTGTGAAGGGTAAGATGTACTGGATTGCTAAGAAGAAGGAAGACTTTACTATTATAAGGTTTGATTTCTCCACTGAAACATTCAAGGAGATATGCGTCTGTCCTTATACTTTGGTGACTCGATTAGGCTGTTTCGATGGAGATAGACTCTCTTTGTTACTACAAGGTGAAGAATCACAGGGGATTGAGGTTTGGATGACAAACAAGTTGAGTGATAAGGTTGTTTCGTTTAGCCAATATTTCAATGTCACTACTCCTGATCTTCCAGCGTTACATCTCCAGTCTTGTATGGCTTGTCCGGGATACTCCATTGGTAAGCGCAGAAATATAAGGGTGTGGTGTGAGGGAAGTGTAGACGTGGATGATAAGTCGTATGTTATCATCACGTTTTACGAAATTGATGAAGGTGGGGTCATAAAACAAATTGAGACAGCAAGCTATGGACAGTTTGAGTACGATGACCCGTTTATTTGTTGCTATGTTTATGTTCCGAGTCTGATTCCGATTCAGTGA

Protein Analysis

369

Amino Acids

43.04

Weight (kDa)

5.04

Isoelectric Point (pI)

49.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 9 - 48 4.7e-09 F-box domain
FBA_1 PF07734 68 - 368 1.3e-80 F-box associated beta propeller domain
FBA_3 PF08268 93 - 264 2.2e-11 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000186)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11608 AT1G11620 AT1G11810 AT1G12170 AT1G12190 AT1G24800 AT1G24881 AT1G25055 AT1G25141 AT1G25150 AT1G25150 AT1G25211 AT1G31510 AT1G32140 AT1G32430 AT1G47390 AT1G50470 AT1G51290 AT1G51320 AT1G53325 AT1G54550 AT1G58090 AT1G59630 AT1G59680 AT1G59680 AT1G62270 AT1G65990 AT1G66490 AT1G67450 AT1G67455 AT1G67455 AT1G77650 AT1G77655 AT2G04920 AT2G07120 AT2G07140 AT2G07140 AT2G11200 AT2G14710 AT2G17310 AT2G17830 AT2G18780 AT2G24510 AT2G27520 AT2G33655 AT2G38590 AT2G39355 AT3G03405 AT3G04250 AT3G08750 AT3G10430 AT3G13680 AT3G13820 AT3G13830 AT3G14030 AT3G16020 AT3G16020 AT3G16020 AT3G16555 AT3G16580 AT3G16590 AT3G16740 AT3G16820 AT3G16880 AT3G17265 AT3G17270 AT3G17280 AT3G17280 AT3G17320 AT3G17400 AT3G17480 AT3G17490 AT3G17500 AT3G17500 AT3G17530 AT3G17540 AT3G17560 AT3G17570 AT3G17620 AT3G17710 AT3G18120 AT3G18320 AT3G18330 AT3G18340 AT3G18905 AT3G18910 AT3G18980 AT3G18980 AT3G19410 AT3G19470 AT3G19470 AT3G19560 AT3G19565 AT3G19880 AT3G19890 AT3G20030 AT3G20400 AT3G20690 AT3G20700 AT3G20710 AT3G21120 AT3G21130 AT3G21170 AT3G21410 AT3G22350 AT3G22350 AT3G22421 AT3G22650 AT3G22650 AT3G22700 AT3G22710 AT3G22720 AT3G22730 AT3G22770 AT3G22870 AT3G22940 AT3G23260 AT3G23420 AT3G23420 AT3G23633 AT3G23633 AT3G23680 AT3G23685 AT3G24580 AT3G24700 AT3G24700 AT3G25090 AT3G25090 AT3G25460 AT3G44120 AT3G44130 AT3G49510 AT3G49520 AT3G49980 AT3G49980 AT3G51171 AT3G59590 AT3G59610 AT4G04690 AT4G05080 AT4G09870 AT4G10190 AT4G10740 AT4G17200 AT4G33290 AT5G25195 AT5G36190 AT5G36200 AT5G36730 AT5G36820 AT5G37040 AT5G41490 AT5G41500 AT5G41510 AT5G42460 AT5G47300 AT5G51000 AT5G60560 AT5G60560 AT5G62830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 653
AccI GTMKAC 1 cut(s) 951
AccII CGCG 1 cut(s) 261
AciI CCGC 1 cut(s) 75
AclWI GGATC 5 cut(s) 82, 168, 206, 383, 494
AcsI RAATTY 1 cut(s) 521
AfaI GTAC 5 cut(s) 119, 149, 313, 617, 1052
AflIII ACRYGT 1 cut(s) 314
AgsI TTSAA 5 cut(s) 97, 463, 526, 682, 841
AjiI CACGTC 2 cut(s) 105, 955
AluBI AGCT 2 cut(s) 466, 1035
AluI AGCT 2 cut(s) 466, 1035
Alw26I GTCTC 2 cut(s) 341, 1019
AlwI GGATC 5 cut(s) 82, 168, 206, 383, 494
ApoI RAATTY 1 cut(s) 521
Asp700I GAANNNNTTC 1 cut(s) 140
AspLEI GCGC 1 cut(s) 918
AsuC2I CCSGG 2 cut(s) 248, 897
AsuHPI GGTGA 5 cut(s) 121, 162, 229, 724, 776
AxyI CCTNAGG 1 cut(s) 483
BauI CACGAG 1 cut(s) 441
BbsI GAAGAC 1 cut(s) 645
BccI CCATC 2 cut(s) 290, 728
BceAI ACGGC 1 cut(s) 13
BciVI GTATCC 3 cut(s) 279, 416, 893
BcnI CCSGG 2 cut(s) 248, 897
BcoDI GTCTC 2 cut(s) 341, 1019
BfuI GTATCC 3 cut(s) 279, 416, 893
BglII AGATCT 1 cut(s) 513
Bme1390I CCNGG 2 cut(s) 248, 897
BmgBI CACGTC 2 cut(s) 105, 955
BmrFI CCNGG 2 cut(s) 248, 897
BmrI ACTGGG 1 cut(s) 574
BmuI ACTGGG 1 cut(s) 574
BoxI GACNNNNGTC 1 cut(s) 333
BpiI GAAGAC 1 cut(s) 645
BplI GAGNNNNNCTC 2 cut(s) 729, 761
BpmI CTGGAG 1 cut(s) 860
BpuMI CCSGG 2 cut(s) 248, 897
BsaAI YACGTR 1 cut(s) 315
BsaBI GATNNNNATC 3 cut(s) 97, 267, 498
BsaJI CCNNGG 1 cut(s) 282
BsaWI WCCGGW 3 cut(s) 172, 214, 352
Bse1I ACTGG 3 cut(s) 569, 623, 877
Bse21I CCTNAGG 1 cut(s) 483
Bse8I GATNNNNATC 3 cut(s) 97, 267, 498
BseDI CCNNGG 1 cut(s) 282
BseGI GGATG 3 cut(s) 493, 798, 964
BseJI GATNNNNATC 3 cut(s) 97, 267, 498
BseMII CTCAG 1 cut(s) 246
BseNI ACTGG 3 cut(s) 569, 623, 877
Bsh1236I CGCG 1 cut(s) 261
BsiSI CCGG 5 cut(s) 173, 215, 248, 353, 896
BslFI GGGAC 1 cut(s) 341
BsmAI GTCTC 2 cut(s) 341, 1019
BsmFI GGGAC 1 cut(s) 341
Bsp1407I TGTACA 1 cut(s) 147
Bsp143I GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
Bsp19I CCATGG 1 cut(s) 282
Bsp68I TCGCGA 1 cut(s) 261
BspACI CCGC 1 cut(s) 75
BspCNI CTCAG 1 cut(s) 245
BspFNI CGCG 1 cut(s) 261
BspPI GGATC 5 cut(s) 82, 168, 206, 383, 494
BsrGI TGTACA 1 cut(s) 147
BsrI ACTGG 3 cut(s) 569, 623, 877
BssECI CCNNGG 1 cut(s) 282
BssMI GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
BssSI CACGAG 1 cut(s) 441
BssT1I CCWWGG 1 cut(s) 282
Bst2BI CACGAG 1 cut(s) 441
Bst4CI ACNGT 6 cut(s) 293, 335, 384, 509, 593, 1044
Bst6I CTCTTC 1 cut(s) 131
BstAUI TGTACA 1 cut(s) 147
BstBAI YACGTR 1 cut(s) 315
BstC8I GCNNGC 1 cut(s) 1033
BstDEI CTNAG 4 cut(s) 232, 483, 555, 627
BstDSI CCRYGG 1 cut(s) 282
BstEII GGTNACC 1 cut(s) 217
BstF5I GGATG 3 cut(s) 493, 798, 964
BstFNI CGCG 1 cut(s) 261
BstHHI GCGC 1 cut(s) 918
BstKTI GATC 8 cut(s) 90, 163, 207, 214, 378, 502, 516, 859
BstMAI GTCTC 2 cut(s) 341, 1019
BstMBI GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
BstPAI GACNNNNGTC 1 cut(s) 333
BstPI GGTNACC 1 cut(s) 217
BstSCI CCNGG 2 cut(s) 246, 895
BstUI CGCG 1 cut(s) 261
BstV2I GAAGAC 1 cut(s) 645
BstX2I RGATCY 2 cut(s) 499, 513
BstYI RGATCY 2 cut(s) 499, 513
Bsu36I CCTNAGG 1 cut(s) 483
BsuI GTATCC 3 cut(s) 279, 416, 893
BtgI CCRYGG 1 cut(s) 282
BtrI CACGTC 2 cut(s) 105, 955
BtsCI GGATG 3 cut(s) 493, 798, 964
BtsIMutI CAGTG 3 cut(s) 289, 402, 669
BtuMI TCGCGA 1 cut(s) 261
Cac8I GCNNGC 1 cut(s) 1033
CfoI GCGC 1 cut(s) 918
CseI GACGC 2 cut(s) 245, 682
Csp6I GTAC 5 cut(s) 118, 148, 312, 616, 1051
CviAII CATG 3 cut(s) 145, 283, 537
CviJI RGCY 6 cut(s) 5, 466, 726, 831, 890, 1035
CviKI_1 RGCY 6 cut(s) 5, 466, 726, 831, 890, 1035
CviQI GTAC 5 cut(s) 118, 148, 312, 616, 1051
DdeI CTNAG 4 cut(s) 232, 483, 555, 627
DpnI GATC 8 cut(s) 89, 162, 206, 213, 377, 501, 515, 858
DpnII GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
Eco130I CCWWGG 1 cut(s) 282
Eco81I CCTNAGG 1 cut(s) 483
Eco91I GGTNACC 1 cut(s) 217
EcoO65I GGTNACC 1 cut(s) 217
EcoRI GAATTC 1 cut(s) 521
EcoT14I CCWWGG 1 cut(s) 282
ErhI CCWWGG 1 cut(s) 282
FaeI CATG 3 cut(s) 148, 286, 540
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 626, 658
FaqI GGGAC 1 cut(s) 341
FatI CATG 3 cut(s) 144, 282, 536
FauI CCCGC 1 cut(s) 82
FblI GTMKAC 1 cut(s) 951
FokI GGATG 3 cut(s) 500, 805, 971
GlaI GCGC 1 cut(s) 917
GsuI CTGGAG 1 cut(s) 860
HapII CCGG 5 cut(s) 173, 215, 248, 353, 896
HgaI GACGC 2 cut(s) 245, 682
HhaI GCGC 1 cut(s) 918
Hin1II CATG 3 cut(s) 148, 286, 540
Hin6I GCGC 1 cut(s) 916
HinP1I GCGC 1 cut(s) 916
HindIII AAGCTT 1 cut(s) 464
HpaII CCGG 5 cut(s) 173, 215, 248, 353, 896
HphI GGTGA 5 cut(s) 121, 162, 229, 724, 776
Hpy166II GTNNAC 3 cut(s) 289, 312, 952
Hpy188I TCNGA 8 cut(s) 92, 235, 273, 499, 532, 1089, 1095, 1101
Hpy188III TCNNGA 4 cut(s) 260, 443, 460, 854
Hpy8I GTNNAC 3 cut(s) 289, 312, 952
Hpy99I CGWCG 4 cut(s) 34, 106, 388, 431
HpyAV CCTTC 3 cut(s) 598, 628, 995
HpyCH4III ACNGT 6 cut(s) 293, 335, 384, 509, 593, 1044
HpyCH4IV ACGT 5 cut(s) 104, 314, 411, 954, 983
HpyCH4V TGCA 3 cut(s) 108, 400, 585
HpyF3I CTNAG 4 cut(s) 232, 483, 555, 627
HpySE526I ACGT 5 cut(s) 104, 314, 411, 954, 983
Hsp92II CATG 3 cut(s) 148, 286, 540
HspAI GCGC 1 cut(s) 916
Kzo9I GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
MaeII ACGT 5 cut(s) 104, 314, 411, 954, 983
MaeIII GTNAC 6 cut(s) 217, 392, 712, 753, 844, 867
MalI GATC 8 cut(s) 89, 162, 206, 213, 377, 501, 515, 858
MboI GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
MboII GAAGA 6 cut(s) 65, 148, 643, 650, 779, 851
MflI RGATCY 2 cut(s) 499, 513
MluCI AATT 4 cut(s) 366, 521, 993, 1020
MlyI GAGTC 3 cut(s) 709, 738, 1099
MnlI CCTC 5 cut(s) 19, 239, 354, 778, 934
MroXI GAANNNNTTC 1 cut(s) 140
MseI TTAA 1 cut(s) 369
MslI CAYNNNNRTG 1 cut(s) 294
MspI CCGG 5 cut(s) 173, 215, 248, 353, 896
MspR9I CCNGG 2 cut(s) 248, 897
MvnI CGCG 1 cut(s) 261
NciI CCSGG 2 cut(s) 248, 897
NcoI CCATGG 1 cut(s) 282
NdeII GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
NlaIII CATG 3 cut(s) 148, 286, 540
NmuCI GTSAC 3 cut(s) 217, 712, 844
NruI TCGCGA 1 cut(s) 261
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PdmI GAANNNNTTC 1 cut(s) 140
PfoI TCCNGGA 2 cut(s) 246, 895
PleI GAGTC 3 cut(s) 709, 738, 1098
PpsI GAGTC 3 cut(s) 709, 738, 1098
Ppu21I YACGTR 1 cut(s) 315
PshAI GACNNNNGTC 1 cut(s) 333
PsiI TTATAA 1 cut(s) 653
PspEI GGTNACC 1 cut(s) 217
PsuI RGATCY 2 cut(s) 499, 513
RruI TCGCGA 1 cut(s) 261
RsaI GTAC 5 cut(s) 119, 149, 313, 617, 1052
RsaNI GTAC 5 cut(s) 118, 148, 312, 616, 1051
RseI CAYNNNNRTG 1 cut(s) 294
SaqAI TTAA 1 cut(s) 369
Sau3AI GATC 8 cut(s) 87, 160, 204, 211, 375, 499, 513, 856
SchI GAGTC 3 cut(s) 709, 738, 1099
ScrFI CCNGG 2 cut(s) 248, 897
SmiMI CAYNNNNRTG 1 cut(s) 294
Sse9I AATT 4 cut(s) 366, 521, 993, 1020
SsiI CCGC 1 cut(s) 75
SspI AATATT 1 cut(s) 836
StyD4I CCNGG 2 cut(s) 246, 895
StyI CCWWGG 1 cut(s) 282
TaaI ACNGT 6 cut(s) 293, 335, 384, 509, 593, 1044
TaiI ACGT 5 cut(s) 107, 317, 414, 957, 986
TaqI TCGA 4 cut(s) 101, 319, 718, 732
TaqII GACCGA 1 cut(s) 236
TasI AATT 4 cut(s) 366, 521, 993, 1020
TatI WGTACW 2 cut(s) 147, 615
Tru1I TTAA 1 cut(s) 369
Tru9I TTAA 1 cut(s) 369
TscAI CASTG 3 cut(s) 296, 409, 676
TseFI GTSAC 3 cut(s) 217, 712, 844
Tsp45I GTSAC 3 cut(s) 217, 712, 844
TspDTI ATGAA 5 cut(s) 133, 172, 525, 534, 1014
TspRI CASTG 3 cut(s) 296, 409, 676
XapI RAATTY 1 cut(s) 521
XmiI GTMKAC 1 cut(s) 951
XmnI GAANNNNTTC 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.