FvH4_2g35573

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000063
Physical Location & Seq
Forward (+)
26222717 .. 26223674
958 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g35573.t1

Sequence Viewer

Length: 879 bp
ATGGGGTTCTCAGCAGAAGACGAAGCTCTGAAGTTCTCCAAGAAATACAACGAGGCCTTGACCTCAGTGCGTGGCAAAGTGAAAACAGGGGAAATCCAAATGTTGGACGAGCAAACTCTACCAACAACAATAGGATCAGCCACACCAACTCCACCAGCTTGCTCCCTAGGTCCTCACTTTCCTGAAGGCATGCCCCATAAGATCTCGAAAGTTCTCTGCCAGGAAGAATTGGACGACTCTTGTCACTTTACTGAGCATGAGTGGTCATCATGGTCTTGCTCAAGGCCTGATGGTTGGCCAACCCTTACATATGAATGGCAAGCATGGGTTCCAAGAATGGAGCACTTTTATGCCGATCATTGGAAAAGAATCGGCATTTATGACGCCATCAAACTCACCGAGCAAGACATATCCAACAGTCATGGGCATGTGTGTACTCATTGGATTGCAGCCAACCGGAGCCGAAATCAACCCAATTCACATTTTCCTACTACCTTCAGAGATAGTCTACTTCCTCCCAAACGCGCGAAAGACCATGACAAAGAAGCAAAAACCGAAGCTATTAAAGCATCAAAAAGATCGCGCAACTACAGCTCTTTGTATAAGAAAAATGCAGTTGTTGACTCTGAGCCTGCGAACCGAAGACCTGTAGGGAAGGATGAACACACAGTGTTTTTATATTATTGGCTATGCAAGTATGTTTTCTGCAGCAGAGCACGCCAATGTCCTCCAGATTACGCAATATTAGCTGACGCGCTGGCTTCTGGCATTCGGCTAGCTCTTGGCCCATTTGTCCTTGCCAACTTATACAAAACTTTTCATAACATTGTGACTAACGACATAGATCTCAACGTCGGCGGACCATTGTGGATGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

293

Amino Acids

33.29

Weight (kDa)

7.64

Isoelectric Point (pI)

50.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 203 - 291 1.3e-11 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 103
AccI GTMKAC 1 cut(s) 508
AccII CGCG 4 cut(s) 525, 527, 583, 755
AciI CCGC 1 cut(s) 858
AclWI GGATC 1 cut(s) 142
AcoI YGGCCR 1 cut(s) 296
AcuI CTGAAG 3 cut(s) 50, 204, 481
AcyI GRCGYC 1 cut(s) 384
AdeI CACNNNGTG 1 cut(s) 670
AfaI GTAC 1 cut(s) 436
AfiI CCNNNNNNNGG 2 cut(s) 103, 360
AjnI CCWGG 1 cut(s) 219
AluBI AGCT 6 cut(s) 26, 158, 560, 594, 749, 779
AluI AGCT 6 cut(s) 26, 158, 560, 594, 749, 779
Alw21I GWGCWC 2 cut(s) 345, 718
AlwI GGATC 1 cut(s) 142
AoxI GGCC 4 cut(s) 54, 284, 296, 784
ApeKI GCWGC 2 cut(s) 449, 708
AspA2I CCTAGG 1 cut(s) 166
AspLEI GCGC 3 cut(s) 527, 585, 757
AspS9I GGNCC 3 cut(s) 170, 785, 860
AsuHPI GGTGA 1 cut(s) 388
AsuNHI GCTAGC 1 cut(s) 775
AvaII GGWCC 2 cut(s) 170, 860
AvrII CCTAGG 1 cut(s) 166
BalI TGGCCA 1 cut(s) 298
BbsI GAAGAC 2 cut(s) 24, 649
Bbv12I GWGCWC 2 cut(s) 345, 718
BbvI GCAGC 2 cut(s) 461, 720
BccI CCATC 2 cut(s) 284, 395
BciT130I CCWGG 1 cut(s) 221
BfaI CTAG 2 cut(s) 167, 776
BfmI CTRYAG 3 cut(s) 589, 648, 706
BglII AGATCT 2 cut(s) 201, 844
BisI GCNGC 2 cut(s) 450, 709
BlnI CCTAGG 1 cut(s) 166
BlsI GCNGC 2 cut(s) 451, 710
Bme1390I CCNGG 1 cut(s) 221
Bme18I GGWCC 2 cut(s) 170, 860
BmgT120I GGNCC 3 cut(s) 170, 785, 860
BmiI GGNNCC 2 cut(s) 330, 461
BmrFI CCNGG 1 cut(s) 221
BmsI GCATC 1 cut(s) 578
BmtI GCTAGC 1 cut(s) 779
BoxI GACNNNNGTC 1 cut(s) 240
BpiI GAAGAC 2 cut(s) 24, 649
BpmI CTGGAG 1 cut(s) 714
BpuEI CTTGAG 1 cut(s) 265
BsaHI GRCGYC 1 cut(s) 384
BsaJI CCNNGG 1 cut(s) 166
BsaWI WCCGGW 1 cut(s) 456
BsaXI ACNNNNNCTCC 2 cut(s) 133, 163
Bsc4I CCNNNNNNNGG 2 cut(s) 103, 360
BseBI CCWGG 1 cut(s) 221
BseDI CCNNGG 1 cut(s) 166
BseGI GGATG 2 cut(s) 664, 876
BseLI CCNNNNNNNGG 2 cut(s) 103, 360
BseMII CTCAG 4 cut(s) 24, 78, 243, 618
BseXI GCAGC 2 cut(s) 461, 720
Bsh1236I CGCG 4 cut(s) 525, 527, 583, 755
BshFI GGCC 4 cut(s) 56, 286, 298, 786
BsiHKAI GWGCWC 2 cut(s) 345, 718
BsiSI CCGG 1 cut(s) 457
BslI CCNNNNNNNGG 2 cut(s) 103, 360
BsmI GAATGC 1 cut(s) 768
BsnI GGCC 4 cut(s) 56, 286, 298, 786
Bsp1286I GDGCHC 2 cut(s) 345, 718
Bsp143I GATC 5 cut(s) 134, 201, 355, 578, 844
BspACI CCGC 1 cut(s) 858
BspANI GGCC 4 cut(s) 56, 286, 298, 786
BspCNI CTCAG 4 cut(s) 23, 77, 244, 619
BspFNI CGCG 4 cut(s) 525, 527, 583, 755
BspLI GGNNCC 2 cut(s) 330, 461
BspMAI CTGCAG 1 cut(s) 710
BspOI GCTAGC 1 cut(s) 779
BspPI GGATC 1 cut(s) 142
BssECI CCNNGG 1 cut(s) 166
BssMI GATC 5 cut(s) 134, 201, 355, 578, 844
BssNI GRCGYC 1 cut(s) 384
BssT1I CCWWGG 1 cut(s) 166
Bst2UI CCWGG 1 cut(s) 221
Bst4CI ACNGT 2 cut(s) 419, 670
BstACI GRCGYC 1 cut(s) 384
BstC8I GCNNGC 7 cut(s) 160, 191, 321, 633, 718, 759, 777
BstDEI CTNAG 4 cut(s) 10, 64, 252, 627
BstF5I GGATG 2 cut(s) 664, 876
BstFNI CGCG 4 cut(s) 525, 527, 583, 755
BstHHI GCGC 3 cut(s) 527, 585, 757
BstKTI GATC 5 cut(s) 137, 204, 358, 581, 847
BstMBI GATC 5 cut(s) 134, 201, 355, 578, 844
BstMWI GCNNNNNNNGC 4 cut(s) 566, 591, 717, 746
BstNI CCWGG 1 cut(s) 221
BstNSI RCATGY 2 cut(s) 193, 431
BstPAI GACNNNNGTC 1 cut(s) 240
BstSCI CCNGG 1 cut(s) 219
BstSFI CTRYAG 3 cut(s) 589, 648, 706
BstUI CGCG 4 cut(s) 525, 527, 583, 755
BstV1I GCAGC 2 cut(s) 461, 720
BstV2I GAAGAC 2 cut(s) 24, 649
BstX2I RGATCY 2 cut(s) 201, 844
BstYI RGATCY 2 cut(s) 201, 844
BsuRI GGCC 4 cut(s) 56, 286, 298, 786
BtsCI GGATG 2 cut(s) 664, 876
BtsIMutI CAGTG 2 cut(s) 72, 675
Cac8I GCNNGC 7 cut(s) 160, 191, 321, 633, 718, 759, 777
CfoI GCGC 3 cut(s) 527, 585, 757
Cfr13I GGNCC 3 cut(s) 170, 785, 860
CseI GACGC 2 cut(s) 392, 761
Csp6I GTAC 1 cut(s) 435
CviAII CATG 7 cut(s) 190, 257, 270, 324, 422, 428, 536
CviQI GTAC 1 cut(s) 435
DdeI CTNAG 4 cut(s) 10, 64, 252, 627
DpnI GATC 5 cut(s) 136, 203, 357, 580, 846
DpnII GATC 5 cut(s) 134, 201, 355, 578, 844
DraIII CACNNNGTG 1 cut(s) 670
EaeI YGGCCR 1 cut(s) 296
EciI GGCGGA 1 cut(s) 873
Eco130I CCWWGG 1 cut(s) 166
Eco147I AGGCCT 2 cut(s) 56, 286
Eco47I GGWCC 2 cut(s) 170, 860
Eco57I CTGAAG 3 cut(s) 50, 204, 481
EcoO109I RGGNCCY 1 cut(s) 170
EcoRII CCWGG 1 cut(s) 219
EcoT14I CCWWGG 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 166
FaeI CATG 7 cut(s) 193, 260, 273, 327, 425, 431, 539
FatI CATG 7 cut(s) 189, 256, 269, 323, 421, 427, 535
FauNDI CATATG 1 cut(s) 310
FblI GTMKAC 1 cut(s) 508
Fnu4HI GCNGC 2 cut(s) 450, 709
FokI GGATG 1 cut(s) 671
Fsp4HI GCNGC 2 cut(s) 450, 709
FspBI CTAG 2 cut(s) 167, 776
GlaI GCGC 3 cut(s) 526, 584, 756
GluI GCNGC 2 cut(s) 450, 709
GsuI CTGGAG 1 cut(s) 714
HaeIII GGCC 4 cut(s) 56, 286, 298, 786
HapII CCGG 1 cut(s) 457
HgaI GACGC 2 cut(s) 392, 761
HhaI GCGC 3 cut(s) 527, 585, 757
Hin1I GRCGYC 1 cut(s) 384
Hin1II CATG 7 cut(s) 193, 260, 273, 327, 425, 431, 539
Hin6I GCGC 3 cut(s) 525, 583, 755
HinP1I GCGC 3 cut(s) 525, 583, 755
HincII GTYRAC 1 cut(s) 622
HindII GTYRAC 1 cut(s) 622
HinfI GANTC 3 cut(s) 236, 369, 623
HpaII CCGG 1 cut(s) 457
HphI GGTGA 1 cut(s) 388
Hpy166II GTNNAC 3 cut(s) 435, 509, 622
Hpy188I TCNGA 3 cut(s) 30, 500, 628
Hpy188III TCNNGA 3 cut(s) 182, 205, 731
Hpy8I GTNNAC 3 cut(s) 435, 509, 622
Hpy99I CGWCG 1 cut(s) 857
HpyAV CCTTC 3 cut(s) 179, 505, 649
HpyCH4III ACNGT 2 cut(s) 419, 670
HpyCH4IV ACGT 1 cut(s) 852
HpyCH4V TGCA 4 cut(s) 449, 614, 693, 708
HpyF10VI GCNNNNNNNGC 4 cut(s) 566, 591, 717, 746
HpyF3I CTNAG 4 cut(s) 10, 64, 252, 627
HpySE526I ACGT 1 cut(s) 852
Hsp92I GRCGYC 1 cut(s) 384
Hsp92II CATG 7 cut(s) 193, 260, 273, 327, 425, 431, 539
HspAI GCGC 3 cut(s) 525, 583, 755
Kzo9I GATC 5 cut(s) 134, 201, 355, 578, 844
LmnI GCTCC 3 cut(s) 167, 340, 459
Lsp1109I GCAGC 2 cut(s) 461, 720
LweI GCATC 1 cut(s) 578
MaeI CTAG 2 cut(s) 167, 776
MaeII ACGT 1 cut(s) 852
MaeIII GTNAC 2 cut(s) 242, 829
MalI GATC 5 cut(s) 136, 203, 357, 580, 846
MboI GATC 5 cut(s) 134, 201, 355, 578, 844
MboII GAAGA 3 cut(s) 29, 236, 654
MflI RGATCY 2 cut(s) 201, 844
MhlI GDGCHC 2 cut(s) 345, 718
MlsI TGGCCA 1 cut(s) 298
MluCI AATT 2 cut(s) 227, 475
MluNI TGGCCA 1 cut(s) 298
MlyI GAGTC 2 cut(s) 230, 617
MmeI TCCRAC 2 cut(s) 84, 438
MnlI CCTC 5 cut(s) 46, 73, 183, 525, 738
Mox20I TGGCCA 1 cut(s) 298
MscI TGGCCA 1 cut(s) 298
MseI TTAA 1 cut(s) 564
MslI CAYNNNNRTG 4 cut(s) 313, 348, 426, 721
Msp20I TGGCCA 1 cut(s) 298
MspI CCGG 1 cut(s) 457
MspR9I CCNGG 1 cut(s) 221
Mva1269I GAATGC 1 cut(s) 768
MvaI CCWGG 1 cut(s) 221
MvnI CGCG 4 cut(s) 525, 527, 583, 755
MwoI GCNNNNNNNGC 4 cut(s) 566, 591, 717, 746
NdeI CATATG 1 cut(s) 310
NdeII GATC 5 cut(s) 134, 201, 355, 578, 844
NheI GCTAGC 1 cut(s) 775
NlaIII CATG 7 cut(s) 193, 260, 273, 327, 425, 431, 539
NlaIV GGNNCC 2 cut(s) 330, 461
NmuCI GTSAC 2 cut(s) 242, 829
NspI RCATGY 2 cut(s) 193, 431
PaeI GCATGC 1 cut(s) 193
PceI AGGCCT 2 cut(s) 56, 286
PctI GAATGC 1 cut(s) 768
PfeI GAWTC 1 cut(s) 369
PflMI CCANNNNNTGG 1 cut(s) 103
PkrI GCNGC 2 cut(s) 451, 710
PleI GAGTC 2 cut(s) 230, 617
PpsI GAGTC 2 cut(s) 230, 617
PpuMI RGGWCCY 1 cut(s) 170
PshAI GACNNNNGTC 1 cut(s) 240
Psp5II RGGWCCY 1 cut(s) 170
Psp6I CCWGG 1 cut(s) 219
PspGI CCWGG 1 cut(s) 219
PspN4I GGNNCC 2 cut(s) 330, 461
PspPI GGNCC 3 cut(s) 170, 785, 860
PspPPI RGGWCCY 1 cut(s) 170
PstI CTGCAG 1 cut(s) 710
PsuI RGATCY 2 cut(s) 201, 844
RsaI GTAC 1 cut(s) 436
RsaNI GTAC 1 cut(s) 435
RseI CAYNNNNRTG 4 cut(s) 313, 348, 426, 721
SaqAI TTAA 1 cut(s) 564
SatI GCNGC 2 cut(s) 450, 709
Sau3AI GATC 5 cut(s) 134, 201, 355, 578, 844
Sau96I GGNCC 3 cut(s) 170, 785, 860
SchI GAGTC 2 cut(s) 230, 617
ScrFI CCNGG 1 cut(s) 221
SduI GDGCHC 2 cut(s) 345, 718
SfaNI GCATC 1 cut(s) 578
SfcI CTRYAG 3 cut(s) 589, 648, 706
SinI GGWCC 2 cut(s) 170, 860
SmiMI CAYNNNNRTG 4 cut(s) 313, 348, 426, 721
SmlI CTYRAG 1 cut(s) 280
SmoI CTYRAG 1 cut(s) 280
SphI GCATGC 1 cut(s) 193
Sse9I AATT 2 cut(s) 227, 475
SseBI AGGCCT 2 cut(s) 56, 286
SsiI CCGC 1 cut(s) 858
SspI AATATT 1 cut(s) 744
SspMI CTAG 2 cut(s) 167, 776
StuI AGGCCT 2 cut(s) 56, 286
StyD4I CCNGG 1 cut(s) 219
StyI CCWWGG 1 cut(s) 166
TaaI ACNGT 2 cut(s) 419, 670
TaiI ACGT 1 cut(s) 855
TaqI TCGA 1 cut(s) 206
TasI AATT 2 cut(s) 227, 475
TatI WGTACW 1 cut(s) 434
TfiI GAWTC 1 cut(s) 369
Tru1I TTAA 1 cut(s) 564
Tru9I TTAA 1 cut(s) 564
TscAI CASTG 2 cut(s) 72, 675
TseFI GTSAC 2 cut(s) 242, 829
TseI GCWGC 2 cut(s) 449, 708
Tsp45I GTSAC 2 cut(s) 242, 829
TspDTI ATGAA 3 cut(s) 327, 675, 809
TspRI CASTG 2 cut(s) 72, 675
Van91I CCANNNNNTGG 1 cut(s) 103
VpaK11BI GGWCC 2 cut(s) 170, 860
XceI RCATGY 2 cut(s) 193, 431
XmaJI CCTAGG 1 cut(s) 166
XmiI GTMKAC 1 cut(s) 508
XspI CTAG 2 cut(s) 167, 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.