Rmu_sc0002283.1_g000027

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002283.1
OG0000063
Physical Location & Seq
Forward (+)
86468 .. 89900
3433 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002283.1_g000027.1.cds

Sequence Viewer

Length: 1848 bp
atgaccgatgatacttcagaaaccgaaacgggattagaggacaacgaagcaacaaaagcccaattggctgcaacgaaagcacaattggccgaattctcaaacaagcttgaagctgcctttaatgtttctatggacaaacttcaaagctctgtgatatgtcggttggcgaagaataaggaaccgcgaagagagtgcatattaggaccacattacagcttgggtatgccgccggccatcaatgaggttctagaaaactcattggtggacacatcttgcttgaccggcggagctagctggtctagttggaacacaaattccaagcagccagggagttggccgaaatcgacacccgagtggaagaaatgggtaccacggatggagcatttttttggccgctcatggaaaaagtttggtatttatgatagcattaaaatgtctgagcaagaaatctacatggaccggcctcttcttgccgctgccttgtgtttttggtcatctgctactaacaccatgaacctgccacttgggccaatgagtccaaccatgctagatatggccacaatatttggttttcggccgaatggagaggagatatgtgccttagctgaccttccttcctcttttcatgctagcctgaaacccaaagtgaacaaggacgacaagaaagccaaacaaaaagttgatgccaaatttggcaattttgagagatccggcctgagcgcccgtgaacctgatcatagagcaactccgactttccaagcttggtggtcaacaattatcaagaagaaacttggagaggacttgcggacaaccgagcgtattgccttgtatggattcccgggcttgttcaccaacaaaggcaatgacaagaagaaggcactggttgccaagtcgaaatccaaagaaaagtccaaggaagagaaaacctcaaagaaacgaggaacaaagtcgggaagagctctacccaccaagaaggtaaagaagtcacctaacgtggtggagagttcggtcacgaatccggctgacattatggttagtgaagacataattttcgagggtgatatggataatagccaaaatgctctagctgaaaatcacatcatgtctggagttgaggatgcggccgcaactagtgatgcctcaaacaacaacacgggctcggccgacagcgaaggttctcctgatgaagcacagtcagaaaactttgagcacgagagagatggccgcattgatcactcttcgcatcctcctgaaagctccatggttgaaattgacatggatgacttgggtgagaaccagcttcctaatattgaccaaccactcgtaaactcagctaaccttgctaaggatgcggaagacatcggtgtacttggccgagaggcattgcttaaccaccaaacacttgtcccggtaagatatttcaatccggcttggtatgaggaactcaaagcagttcaaccttggaattggttctcctcaatccaactgaaccaaatccttctatgtccggaatgcttacctcccctcttactgaagggatgcctcgaaatgatcaagctatcgtttgtgccccatcgtcgactgagcctgtgtctctctccctgcctagaagcccaaaaagagtttgaaaccagcgagaagttgataaaaaagcaagtcaaaatcacttcggcctccatccgaaccattgttcctcaacaagatctcactaggtatagcttgattttgtcatcggtcaagtcgtacaacaagaagaaatgcatcttaaagcgaaaggtcgaccaaggtatggaagacttggaaaaggttaaggaagttcttcagtctcttctaccctctgacatgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

615

Amino Acids

68.61

Weight (kDa)

6.43

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 525
Acc65I GGTACC 1 cut(s) 367
AccB1I GGYRCC 1 cut(s) 367
AccB7I CCANNNNNTGG 1 cut(s) 1789
AccBSI CCGCTC 1 cut(s) 396
AccI GTMKAC 2 cut(s) 1579, 1779
AccII CGCG 1 cut(s) 184
AccIII TCCGGA 1 cut(s) 1507
AclWI GGATC 1 cut(s) 702
AcsI RAATTY 3 cut(s) 92, 313, 689
AcuI CTGAAG 2 cut(s) 1553, 1805
AfaI GTAC 3 cut(s) 369, 1368, 1745
AfiI CCNNNNNNNGG 2 cut(s) 1345, 1789
AflIII ACRYGT 1 cut(s) 1842
AgsI TTSAA 6 cut(s) 110, 143, 1268, 1423, 1457, 1628
AhlI ACTAGT 1 cut(s) 1130
AjnI CCWGG 1 cut(s) 325
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AleI CACNNNNGTG 1 cut(s) 352
AloI GAACNNNNNNTCC 4 cut(s) 299, 331, 1675, 1707
Alw21I GWGCWC 2 cut(s) 961, 1212
Alw26I GTCTC 2 cut(s) 1598, 1830
AlwI GGATC 1 cut(s) 702
Ama87I CYCGRG 2 cut(s) 350, 838
Aor13HI TCCGGA 1 cut(s) 1507
ApeKI GCWGC 4 cut(s) 68, 113, 322, 476
ApoI RAATTY 3 cut(s) 92, 313, 689
ArsI GACNNNNNNTTYG 2 cut(s) 1034, 1066
Asp700I GAANNNNTTC 2 cut(s) 1469, 1818
Asp718I GGTACC 1 cut(s) 367
AspLEI GCGC 1 cut(s) 722
AspS9I GGNCC 3 cut(s) 203, 457, 527
AsuC2I CCSGG 3 cut(s) 839, 840, 1409
AsuHPI GGTGA 4 cut(s) 841, 978, 1070, 1301
AsuNHI GCTAGC 2 cut(s) 290, 629
AvaI CYCGRG 2 cut(s) 350, 838
AvaII GGWCC 2 cut(s) 203, 457
BaeGI GKGCMC 1 cut(s) 1572
BalI TGGCCA 1 cut(s) 557
BanI GGYRCC 1 cut(s) 367
BanII GRGCYC 2 cut(s) 961, 1160
BauI CACGAG 1 cut(s) 1211
BbsI GAAGAC 3 cut(s) 1047, 1362, 1800
Bbv12I GWGCWC 2 cut(s) 961, 1212
BbvI GCAGC 4 cut(s) 55, 100, 334, 463
BccI CCATC 5 cut(s) 242, 370, 1214, 1581, 1685
BcgI CGANNNNNNTGC 4 cut(s) 174, 208, 803, 837
BciT130I CCWGG 1 cut(s) 327
BclI TGATCA 3 cut(s) 733, 1231, 1551
BcnI CCSGG 3 cut(s) 839, 840, 1409
BcoDI GTCTC 2 cut(s) 1598, 1830
BcuI ACTAGT 1 cut(s) 1130
BfaI CTAG 9 cut(s) 248, 291, 300, 548, 630, 1085, 1131, 1607, 1710
BfoI RGCGCY 1 cut(s) 723
BfuAI ACCTGC 1 cut(s) 525
BglI GCCNNNNNGGC 2 cut(s) 65, 526
BglII AGATCT 1 cut(s) 1702
Bme1390I CCNGG 4 cut(s) 327, 839, 840, 1409
Bme18I GGWCC 2 cut(s) 203, 457
BmeT110I CYCGRG 2 cut(s) 350, 838
BmgT120I GGNCC 3 cut(s) 203, 457, 527
BmiI GGNNCC 2 cut(s) 180, 369
BmrFI CCNGG 4 cut(s) 327, 839, 840, 1409
BmsI GCATC 7 cut(s) 673, 1108, 1126, 1252, 1339, 1529, 1770
BmtI GCTAGC 2 cut(s) 294, 633
BpiI GAAGAC 3 cut(s) 1047, 1362, 1800
BplI GAGNNNNNCTC 2 cut(s) 911, 943
BpmI CTGGAG 1 cut(s) 1128
Bpu10I CCTNAGC 3 cut(s) 601, 716, 1344
BpuMI CCSGG 3 cut(s) 839, 840, 1409
BsaJI CCNNGG 7 cut(s) 326, 371, 838, 912, 1260, 1460, 1783
BsaWI WCCGGW 1 cut(s) 1507
Bsc4I CCNNNNNNNGG 2 cut(s) 1345, 1789
Bse118I RCCGGY 3 cut(s) 229, 281, 459
Bse1I ACTGG 1 cut(s) 885
Bse3DI GCAATG 2 cut(s) 868, 1382
BseAI TCCGGA 1 cut(s) 1507
BseBI CCWGG 1 cut(s) 327
BseDI CCNNGG 7 cut(s) 326, 371, 838, 912, 1260, 1460, 1783
BseGI GGATG 7 cut(s) 381, 1123, 1243, 1285, 1354, 1544, 1677
BseLI CCNNNNNNNGG 2 cut(s) 1345, 1789
BseMI GCAATG 2 cut(s) 868, 1382
BseMII CTCAG 4 cut(s) 429, 707, 1344, 1574
BseNI ACTGG 1 cut(s) 885
BseRI GAGGAG 2 cut(s) 602, 1465
BseSI GKGCMC 1 cut(s) 1572
BseX3I CGGCCG 3 cut(s) 575, 1122, 1161
BseXI GCAGC 4 cut(s) 55, 100, 334, 463
Bsh1236I CGCG 1 cut(s) 184
Bsh1285I CGRYCG 3 cut(s) 578, 1125, 1164
BshNI GGYRCC 1 cut(s) 367
BsiEI CGRYCG 3 cut(s) 578, 1125, 1164
BsiHKAI GWGCWC 2 cut(s) 961, 1212
BsiHKCI CYCGRG 2 cut(s) 350, 838
BsiSI CCGG 9 cut(s) 230, 282, 460, 711, 839, 1019, 1409, 1427, 1508
BslFI GGGAC 1 cut(s) 1391
BslI CCNNNNNNNGG 2 cut(s) 1345, 1789
BsmAI GTCTC 2 cut(s) 1598, 1830
BsmFI GGGAC 1 cut(s) 1391
BsmI GAATGC 1 cut(s) 1517
BsoBI CYCGRG 2 cut(s) 350, 838
Bsp1286I GDGCHC 4 cut(s) 961, 1160, 1212, 1572
Bsp13I TCCGGA 1 cut(s) 1507
Bsp143I GATC 5 cut(s) 707, 733, 1231, 1551, 1702
Bsp19I CCATGG 1 cut(s) 1260
BspCNI CTCAG 4 cut(s) 430, 708, 1343, 1575
BspEI TCCGGA 1 cut(s) 1507
BspFNI CGCG 1 cut(s) 184
BspLI GGNNCC 2 cut(s) 180, 369
BspMI ACCTGC 1 cut(s) 525
BspOI GCTAGC 2 cut(s) 294, 633
BspPI GGATC 1 cut(s) 702
BspQI GCTCTTC 1 cut(s) 949
BspT107I GGYRCC 1 cut(s) 367
BsrBI CCGCTC 1 cut(s) 396
BsrDI GCAATG 2 cut(s) 868, 1382
BsrFI RCCGGY 3 cut(s) 229, 281, 459
BsrI ACTGG 1 cut(s) 885
BssAI RCCGGY 3 cut(s) 229, 281, 459
BssECI CCNNGG 7 cut(s) 326, 371, 838, 912, 1260, 1460, 1783
BssMI GATC 5 cut(s) 707, 733, 1231, 1551, 1702
BssSI CACGAG 1 cut(s) 1211
BssT1I CCWWGG 4 cut(s) 912, 1260, 1460, 1783
Bst2BI CACGAG 1 cut(s) 1211
Bst2UI CCWGG 1 cut(s) 327
Bst4CI ACNGT 1 cut(s) 1194
Bst6I CTCTTC 6 cut(s) 181, 471, 912, 949, 1243, 1833
BstAPI GCANNNNNTGC 1 cut(s) 884
BstC8I GCNNGC 3 cut(s) 231, 292, 631
BstDEI CTNAG 6 cut(s) 438, 601, 716, 1330, 1344, 1583
BstDSI CCRYGG 2 cut(s) 371, 1260
BstENI CCTNNNNNAGG 1 cut(s) 1343
BstF5I GGATG 7 cut(s) 381, 1123, 1243, 1285, 1354, 1544, 1677
BstFNI CGCG 1 cut(s) 184
BstH2I RGCGCY 1 cut(s) 723
BstHHI GCGC 1 cut(s) 722
BstKTI GATC 5 cut(s) 710, 736, 1234, 1554, 1705
BstMAI GTCTC 2 cut(s) 1598, 1830
BstMBI GATC 5 cut(s) 707, 733, 1231, 1551, 1702
BstMCI CGRYCG 3 cut(s) 578, 1125, 1164
BstNI CCWGG 1 cut(s) 327
BstNSI RCATGY 1 cut(s) 1846
BstSCI CCNGG 4 cut(s) 325, 837, 838, 1407
BstSLI GKGCMC 1 cut(s) 1572
BstUI CGCG 1 cut(s) 184
BstV1I GCAGC 4 cut(s) 55, 100, 334, 463
BstV2I GAAGAC 3 cut(s) 1047, 1362, 1800
BstX2I RGATCY 2 cut(s) 707, 1702
BstXI CCANNNNNNTGG 1 cut(s) 333
BstYI RGATCY 2 cut(s) 707, 1702
BstZI CGGCCG 3 cut(s) 575, 1122, 1161
BtgI CCRYGG 2 cut(s) 371, 1260
BtsCI GGATG 7 cut(s) 381, 1123, 1243, 1285, 1354, 1544, 1677
BtsIMutI CAGTG 1 cut(s) 878
BveI ACCTGC 1 cut(s) 525
Cac8I GCNNGC 3 cut(s) 231, 292, 631
CciNI GCGGCCGC 1 cut(s) 1122
CfoI GCGC 1 cut(s) 722
Cfr10I RCCGGY 3 cut(s) 229, 281, 459
Cfr13I GGNCC 3 cut(s) 203, 457, 527
Cfr9I CCCGGG 1 cut(s) 838
Csp6I GTAC 3 cut(s) 368, 1367, 1744
CspCI CAANNNNNGTGG 4 cut(s) 547, 582, 746, 781
CviAII CATG 9 cut(s) 399, 454, 511, 544, 626, 1102, 1261, 1276, 1843
CviQI GTAC 3 cut(s) 368, 1367, 1744
DdeI CTNAG 6 cut(s) 438, 601, 716, 1330, 1344, 1583
DpnI GATC 5 cut(s) 709, 735, 1233, 1553, 1704
DpnII GATC 5 cut(s) 707, 733, 1231, 1551, 1702
EagI CGGCCG 3 cut(s) 575, 1122, 1161
Eam1104I CTCTTC 6 cut(s) 181, 471, 912, 949, 1243, 1833
EarI CTCTTC 6 cut(s) 181, 471, 912, 949, 1243, 1833
EciI GGCGGA 1 cut(s) 300
Ecl136II GAGCTC 1 cut(s) 959
EclXI CGGCCG 3 cut(s) 575, 1122, 1161
Eco130I CCWWGG 4 cut(s) 912, 1260, 1460, 1783
Eco24I GRGCYC 2 cut(s) 961, 1160
Eco47I GGWCC 2 cut(s) 203, 457
Eco52I CGGCCG 3 cut(s) 575, 1122, 1161
Eco53kI GAGCTC 1 cut(s) 959
Eco57I CTGAAG 2 cut(s) 1553, 1805
Eco88I CYCGRG 2 cut(s) 350, 838
EcoICRI GAGCTC 1 cut(s) 959
EcoNI CCTNNNNNAGG 1 cut(s) 1343
EcoRI GAATTC 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 325
EcoT14I CCWWGG 4 cut(s) 912, 1260, 1460, 1783
EcoT22I ATGCAT 1 cut(s) 1763
EcoT38I GRGCYC 2 cut(s) 961, 1160
ErhI CCWWGG 4 cut(s) 912, 1260, 1460, 1783
FaeI CATG 9 cut(s) 402, 457, 514, 547, 629, 1105, 1264, 1279, 1846
FaqI GGGAC 1 cut(s) 1391
FatI CATG 9 cut(s) 398, 453, 510, 543, 625, 1101, 1260, 1275, 1842
FbaI TGATCA 3 cut(s) 733, 1231, 1551
FblI GTMKAC 2 cut(s) 1579, 1779
FokI GGATG 7 cut(s) 388, 1130, 1230, 1292, 1361, 1551, 1664
FriOI GRGCYC 2 cut(s) 961, 1160
FspBI CTAG 9 cut(s) 248, 291, 300, 548, 630, 1085, 1131, 1607, 1710
GlaI GCGC 1 cut(s) 721
GsuI CTGGAG 1 cut(s) 1128
HaeII RGCGCY 1 cut(s) 723
HapII CCGG 9 cut(s) 230, 282, 460, 711, 839, 1019, 1409, 1427, 1508
HhaI GCGC 1 cut(s) 722
Hin1II CATG 9 cut(s) 402, 457, 514, 547, 629, 1105, 1264, 1279, 1846
Hin6I GCGC 1 cut(s) 720
HinP1I GCGC 1 cut(s) 720
HincII GTYRAC 3 cut(s) 771, 1580, 1780
HindII GTYRAC 3 cut(s) 771, 1580, 1780
HindIII AAGCTT 2 cut(s) 104, 759
HinfI GANTC 3 cut(s) 535, 834, 1015
HpaII CCGG 9 cut(s) 230, 282, 460, 711, 839, 1019, 1409, 1427, 1508
HphI GGTGA 4 cut(s) 841, 978, 1070, 1301
Hpy166II GTNNAC 9 cut(s) 265, 649, 728, 771, 849, 1327, 1367, 1580, 1780
Hpy188I TCNGA 6 cut(s) 19, 439, 750, 1198, 1682, 1840
Hpy188III TCNNGA 8 cut(s) 248, 781, 951, 1012, 1107, 1181, 1250, 1508
Hpy8I GTNNAC 9 cut(s) 265, 649, 728, 771, 849, 1327, 1367, 1580, 1780
Hpy99I CGWCG 1 cut(s) 1581
HpyAV CCTTC 7 cut(s) 620, 624, 868, 967, 1166, 1508, 1528
HpyCH4III ACNGT 1 cut(s) 1194
HpyCH4IV ACGT 1 cut(s) 993
HpyCH4V TGCA 3 cut(s) 71, 195, 1761
HpyF3I CTNAG 6 cut(s) 438, 601, 716, 1330, 1344, 1583
HpySE526I ACGT 1 cut(s) 993
Hsp92II CATG 9 cut(s) 402, 457, 514, 547, 629, 1105, 1264, 1279, 1846
HspAI GCGC 1 cut(s) 720
Kpn2I TCCGGA 1 cut(s) 1507
KpnI GGTACC 1 cut(s) 371
KroI GCCGGC 1 cut(s) 229
KroNI GCCGGC 1 cut(s) 231
Ksp22I TGATCA 3 cut(s) 733, 1231, 1551
Kzo9I GATC 5 cut(s) 707, 733, 1231, 1551, 1702
LguI GCTCTTC 1 cut(s) 949
LmnI GCTCC 3 cut(s) 287, 379, 1262
Lsp1109I GCAGC 4 cut(s) 55, 100, 334, 463
LweI GCATC 7 cut(s) 673, 1108, 1126, 1252, 1339, 1529, 1770
MaeI CTAG 9 cut(s) 248, 291, 300, 548, 630, 1085, 1131, 1607, 1710
MaeII ACGT 1 cut(s) 993
MaeIII GTNAC 2 cut(s) 984, 1009
MalI GATC 5 cut(s) 709, 735, 1233, 1553, 1704
MbiI CCGCTC 1 cut(s) 396
MboI GATC 5 cut(s) 707, 733, 1231, 1551, 1702
MfeI CAATTG 2 cut(s) 62, 83
MflI RGATCY 2 cut(s) 707, 1702
MhlI GDGCHC 4 cut(s) 961, 1160, 1212, 1572
MlsI TGGCCA 1 cut(s) 557
MluNI TGGCCA 1 cut(s) 557
MlyI GAGTC 1 cut(s) 544
MmeI TCCRAC 4 cut(s) 284, 563, 773, 1507
Mox20I TGGCCA 1 cut(s) 557
Mph1103I ATGCAT 1 cut(s) 1763
MroI TCCGGA 1 cut(s) 1507
MroNI GCCGGC 1 cut(s) 229
MroXI GAANNNNTTC 2 cut(s) 1469, 1818
MscI TGGCCA 1 cut(s) 557
MseI TTAA 5 cut(s) 120, 429, 1389, 1766, 1809
MslI CAYNNNNRTG 2 cut(s) 352, 431
Msp20I TGGCCA 1 cut(s) 557
MspA1I CMGCKG 1 cut(s) 476
MspI CCGG 9 cut(s) 230, 282, 460, 711, 839, 1019, 1409, 1427, 1508
MspR9I CCNGG 4 cut(s) 327, 839, 840, 1409
MunI CAATTG 2 cut(s) 62, 83
Mva1269I GAATGC 1 cut(s) 1517
MvaI CCWGG 1 cut(s) 327
MvnI CGCG 1 cut(s) 184
NaeI GCCGGC 1 cut(s) 231
NciI CCSGG 3 cut(s) 839, 840, 1409
NcoI CCATGG 1 cut(s) 1260
NdeII GATC 5 cut(s) 707, 733, 1231, 1551, 1702
NgoMIV GCCGGC 1 cut(s) 229
NheI GCTAGC 2 cut(s) 290, 629
NlaIII CATG 9 cut(s) 402, 457, 514, 547, 629, 1105, 1264, 1279, 1846
NlaIV GGNNCC 2 cut(s) 180, 369
NmeAIII GCCGAG 2 cut(s) 1139, 1400
NmuCI GTSAC 2 cut(s) 984, 1009
NotI GCGGCCGC 1 cut(s) 1122
NsiI ATGCAT 1 cut(s) 1763
NspI RCATGY 1 cut(s) 1846
OliI CACNNNNGTG 1 cut(s) 352
PciI ACATGT 1 cut(s) 1842
PciSI GCTCTTC 1 cut(s) 949
PcsI WCGNNNNNNNCGW 1 cut(s) 1739
PctI GAATGC 1 cut(s) 1517
PdiI GCCGGC 1 cut(s) 231
PdmI GAANNNNTTC 2 cut(s) 1469, 1818
PfeI GAWTC 2 cut(s) 834, 1015
PflMI CCANNNNNTGG 1 cut(s) 1789
PleI GAGTC 1 cut(s) 543
PpsI GAGTC 1 cut(s) 543
PscI ACATGT 1 cut(s) 1842
Psp124BI GAGCTC 1 cut(s) 961
Psp6I CCWGG 1 cut(s) 325
PspGI CCWGG 1 cut(s) 325
PspN4I GGNNCC 2 cut(s) 180, 369
PspPI GGNCC 3 cut(s) 203, 457, 527
PsuI RGATCY 2 cut(s) 707, 1702
RsaI GTAC 3 cut(s) 369, 1368, 1745
RsaNI GTAC 3 cut(s) 368, 1367, 1744
RseI CAYNNNNRTG 2 cut(s) 352, 431
SacI GAGCTC 1 cut(s) 961
SalI GTCGAC 2 cut(s) 1578, 1778
SapI GCTCTTC 1 cut(s) 949
SaqAI TTAA 5 cut(s) 120, 429, 1389, 1766, 1809
Sau3AI GATC 5 cut(s) 707, 733, 1231, 1551, 1702
Sau96I GGNCC 3 cut(s) 203, 457, 527
SchI GAGTC 1 cut(s) 544
ScrFI CCNGG 4 cut(s) 327, 839, 840, 1409
SduI GDGCHC 4 cut(s) 961, 1160, 1212, 1572
SfaNI GCATC 7 cut(s) 673, 1108, 1126, 1252, 1339, 1529, 1770
SinI GGWCC 2 cut(s) 203, 457
SmaI CCCGGG 1 cut(s) 840
SmiMI CAYNNNNRTG 2 cut(s) 352, 431
SpeI ACTAGT 1 cut(s) 1130
SspI AATATT 2 cut(s) 564, 1309
SspMI CTAG 9 cut(s) 248, 291, 300, 548, 630, 1085, 1131, 1607, 1710
SstI GAGCTC 1 cut(s) 961
StyD4I CCNGG 4 cut(s) 325, 837, 838, 1407
StyI CCWWGG 4 cut(s) 912, 1260, 1460, 1783
TaaI ACNGT 1 cut(s) 1194
TaiI ACGT 1 cut(s) 996
TaqI TCGA 6 cut(s) 344, 893, 1053, 1545, 1579, 1779
TaqII GACCGA 3 cut(s) 20, 997, 1723
TatI WGTACW 1 cut(s) 1366
TauI GCSGC 6 cut(s) 229, 396, 476, 1124, 1127, 1227
TfiI GAWTC 2 cut(s) 834, 1015
Tru1I TTAA 5 cut(s) 120, 429, 1389, 1766, 1809
Tru9I TTAA 5 cut(s) 120, 429, 1389, 1766, 1809
TscAI CASTG 1 cut(s) 885
TseFI GTSAC 2 cut(s) 984, 1009
TseI GCWGC 4 cut(s) 68, 113, 322, 476
Tsp45I GTSAC 2 cut(s) 984, 1009
TspDTI ATGAA 3 cut(s) 527, 614, 1200
TspGWI ACGGA 1 cut(s) 388
TspMI CCCGGG 1 cut(s) 838
TspRI CASTG 1 cut(s) 885
Van91I CCANNNNNTGG 1 cut(s) 1789
VpaK11BI GGWCC 2 cut(s) 203, 457
XagI CCTNNNNNAGG 1 cut(s) 1343
XapI RAATTY 3 cut(s) 92, 313, 689
XbaI TCTAGA 1 cut(s) 247
XceI RCATGY 1 cut(s) 1846
XcmI CCANNNNNNNNNTGG 1 cut(s) 550
XmaI CCCGGG 1 cut(s) 838
XmiI GTMKAC 2 cut(s) 1579, 1779
XmnI GAANNNNTTC 2 cut(s) 1469, 1818
XspI CTAG 9 cut(s) 248, 291, 300, 548, 630, 1085, 1131, 1607, 1710
Zsp2I ATGCAT 1 cut(s) 1763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.