pycom13g27890
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
23973977 .. 23975544
1568 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g27890.2

Sequence Viewer

Length: 1257 bp
ATGCCGATGGCTGAAGCCCTGGCTAACGATCACACCTTGGCCCTTAGTTTAGCCATCTTTGCCAACCTCCTAGGCCGCCTGGCCGAAGCGACCATCAACACAATCGACCCATACCAGAACGGACCTCTCTGGATCCCCAACTTCCAATCCACTGAAGCACTCGGCCTTCAATTGGCTTCTCGACCAACACCTCCTTACCGGGCCAAAGAAGTCTTCAAATACTTCTTCAGCCTAGACGTCCTTTCTGATAACGAATTTTTAATATGTCGTCGTCAAGAGTACCCATCCTCAATCAGGCTTCCAACATCAGTCGTTCGTGTTAACACGCGACCTTCCCCTCGGCTGCAATGCTTGTTGAGCAAGCTGGGAGGTCTACCATCCTCACTTCACTACTCAATAACTCGGTTACCTTCAAGGTTGCCCGATGCCTTTACTTACTTCCTGCTCCCTCCTAAACTGAGTACAAAGATTTTCAGGAGAGGTGCAAAACATTCTGCCTTCGACCAACTGTTCCTGAATCTCTCGGCATTGATACCTTTAGGGCCCGGTGGAAAGAATACACTAGGGACTTCTTTGGCACTCCGGTCGAAGAAGTCATCAACAAGATCTTTGGTGATCGATCCAAAACAACTACAACCCCATAATCCAAAGAGACTACCCAAGGTATATGTCTGTTTACCTTCATTCTTCAAATACTTACTCAACTTTGCTGACTTAATTTATGCCGCGGCTGGGGTAAGGAAAAAGTCGATCCCCTCTTCTAAGAAAACTAAAATTGCCGCACAACAAGTGAAGCTCCCCAACCCCCAAAACTTGTCAAGAACTTGGCAAAGAAGGGAGAACGAAAGATTCACGTTATCTCCAGCTAGACCACGGAAGCGATCGCTCCTAGTGTTTCTCCTCCTGCTCCCGACCTCCAGGCCTCGACGGAAAAATGACCAACTGCAATTGGCCAAGCACTCCCAAATCGACCAGTCCCTAGAGTCGTGCTCTGGGGCCGATCATTGCACTTGTCTTGGAGGAGGTGACCTCTTCAGTTGGGATAAATCTTTCCAAAACCCCAAAACAATCAGCGATCATCCTGGAAGAGCTTTTTATTTCAGGATGACGAAAGCGACGAGATTCCGCTGTCGAGTCGCCCTTGACCAAACAAACCTTCTTCCACTAATCCTCCCTTTGTGGTCGAGGCAGCTGGCTAGGTCGATCCACCTGCAGCTGATCAAGGAAAAAGGCCTCATGTTGAACCTGAAGCAATGA

Protein Analysis

419

Amino Acids

47.25

Weight (kDa)

10.46

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1218
AatII GACGTC 1 cut(s) 240
Acc36I ACCTGC 1 cut(s) 1218
AccI GTMKAC 1 cut(s) 373
AccII CGCG 2 cut(s) 328, 728
AciI CCGC 5 cut(s) 76, 726, 728, 780, 1126
AclWI GGATC 5 cut(s) 127, 140, 614, 745, 1198
AcoI YGGCCR 2 cut(s) 81, 951
AcsI RAATTY 1 cut(s) 254
AcuI CTGAAG 4 cut(s) 33, 174, 211, 1018
AcyI GRCGYC 1 cut(s) 237
AfaI GTAC 2 cut(s) 281, 463
AfiI CCNNNNNNNGG 3 cut(s) 172, 294, 732
AgsI TTSAA 5 cut(s) 170, 217, 414, 691, 1243
AjnI CCWGG 4 cut(s) 18, 78, 917, 1081
AjuI GAANNNNNNNTTGG 4 cut(s) 197, 229, 1140, 1172
AluBI AGCT 6 cut(s) 364, 796, 866, 1091, 1192, 1216
AluI AGCT 6 cut(s) 364, 796, 866, 1091, 1192, 1216
Alw21I GWGCWC 1 cut(s) 992
Alw26I GTCTC 1 cut(s) 646
AlwI GGATC 5 cut(s) 127, 140, 614, 745, 1198
ApaI GGGCCC 1 cut(s) 546
ApeKI GCWGC 3 cut(s) 343, 1189, 1213
ApoI RAATTY 1 cut(s) 254
AsiSI GCGATCGC 1 cut(s) 884
AspA2I CCTAGG 1 cut(s) 70
AspS9I GGNCC 6 cut(s) 40, 122, 201, 542, 543, 996
AsuC2I CCSGG 2 cut(s) 200, 546
AsuHPI GGTGA 2 cut(s) 625, 1037
AvaII GGWCC 1 cut(s) 122
AvrII CCTAGG 1 cut(s) 70
BaeGI GKGCMC 1 cut(s) 546
BalI TGGCCA 1 cut(s) 953
BamHI GGATCC 1 cut(s) 132
BanII GRGCYC 1 cut(s) 546
BbsI GAAGAC 1 cut(s) 205
Bbv12I GWGCWC 1 cut(s) 992
BbvI GCAGC 3 cut(s) 330, 1201, 1225
BccI CCATC 4 cut(s) 62, 101, 292, 385
BcgI CGANNNNNNTGC 4 cut(s) 567, 601, 1192, 1226
BciT130I CCWGG 4 cut(s) 20, 80, 919, 1083
BclI TGATCA 1 cut(s) 1218
BcnI CCSGG 2 cut(s) 200, 546
BcoDI GTCTC 1 cut(s) 646
BfaI CTAG 7 cut(s) 71, 233, 563, 867, 890, 980, 1197
BfmI CTRYAG 1 cut(s) 1211
BfuAI ACCTGC 1 cut(s) 1218
BglII AGATCT 1 cut(s) 605
BisI GCNGC 7 cut(s) 76, 344, 726, 729, 780, 1190, 1214
BlnI CCTAGG 1 cut(s) 70
BlsI GCNGC 7 cut(s) 77, 345, 727, 730, 781, 1191, 1215
Bme1390I CCNGG 6 cut(s) 20, 80, 200, 546, 919, 1083
Bme18I GGWCC 1 cut(s) 122
BmgT120I GGNCC 6 cut(s) 40, 122, 201, 542, 543, 996
BmiI GGNNCC 3 cut(s) 134, 544, 997
BmrFI CCNGG 6 cut(s) 20, 80, 200, 546, 919, 1083
BmsI GCATC 1 cut(s) 415
BpiI GAAGAC 1 cut(s) 205
BplI GAGNNNNNCTC 4 cut(s) 974, 1006, 1014, 1046
BpmI CTGGAG 2 cut(s) 846, 901
BpuMI CCSGG 2 cut(s) 200, 546
Bsa29I ATCGAT 1 cut(s) 618
BsaHI GRCGYC 1 cut(s) 237
BsaJI CCNNGG 7 cut(s) 18, 36, 70, 338, 660, 726, 872
BsaWI WCCGGW 1 cut(s) 582
BsaXI ACNNNNNCTCC 4 cut(s) 844, 874, 1155, 1185
Bsc4I CCNNNNNNNGG 3 cut(s) 172, 294, 732
Bse1I ACTGG 1 cut(s) 973
Bse3DI GCAATG 2 cut(s) 353, 1003
BseBI CCWGG 4 cut(s) 20, 80, 919, 1083
BseCI ATCGAT 1 cut(s) 618
BseDI CCNNGG 7 cut(s) 18, 36, 70, 338, 660, 726, 872
BseGI GGATG 4 cut(s) 284, 377, 1078, 1110
BseLI CCNNNNNNNGG 3 cut(s) 172, 294, 732
BseMI GCAATG 2 cut(s) 353, 1003
BseMII CTCAG 1 cut(s) 449
BseNI ACTGG 1 cut(s) 973
BseRI GAGGAG 2 cut(s) 890, 1035
BseSI GKGCMC 1 cut(s) 546
BseXI GCAGC 3 cut(s) 330, 1201, 1225
BseYI CCCAGC 2 cut(s) 364, 731
Bsh1236I CGCG 2 cut(s) 328, 728
Bsh1285I CGRYCG 2 cut(s) 587, 884
BshVI ATCGAT 1 cut(s) 618
BsiEI CGRYCG 2 cut(s) 587, 884
BsiHKAI GWGCWC 1 cut(s) 992
BsiSI CCGG 3 cut(s) 199, 546, 583
BslFI GGGAC 2 cut(s) 580, 961
BslI CCNNNNNNNGG 3 cut(s) 172, 294, 732
BsmAI GTCTC 1 cut(s) 646
BsmFI GGGAC 2 cut(s) 580, 961
Bsp120I GGGCCC 1 cut(s) 542
Bsp1286I GDGCHC 2 cut(s) 546, 992
BspACI CCGC 5 cut(s) 76, 726, 728, 780, 1126
BspCNI CTCAG 1 cut(s) 450
BspDI ATCGAT 1 cut(s) 618
BspFNI CGCG 2 cut(s) 328, 728
BspLI GGNNCC 3 cut(s) 134, 544, 997
BspMAI CTGCAG 1 cut(s) 1215
BspMI ACCTGC 1 cut(s) 1218
BspPI GGATC 5 cut(s) 127, 140, 614, 745, 1198
BspQI GCTCTTC 1 cut(s) 1081
BsrDI GCAATG 2 cut(s) 353, 1003
BsrI ACTGG 1 cut(s) 973
BssECI CCNNGG 7 cut(s) 18, 36, 70, 338, 660, 726, 872
BssNI GRCGYC 1 cut(s) 237
BssT1I CCWWGG 3 cut(s) 36, 70, 660
Bst2UI CCWGG 4 cut(s) 20, 80, 919, 1083
Bst4CI ACNGT 1 cut(s) 510
Bst6I CTCTTC 3 cut(s) 763, 1037, 1081
BstACI GRCGYC 1 cut(s) 237
BstC8I GCNNGC 2 cut(s) 362, 1194
BstDEI CTNAG 3 cut(s) 44, 458, 762
BstDSI CCRYGG 2 cut(s) 726, 872
BstEII GGTNACC 2 cut(s) 405, 1025
BstENI CCTNNNNNAGG 1 cut(s) 292
BstF5I GGATG 4 cut(s) 284, 377, 1078, 1110
BstFNI CGCG 2 cut(s) 328, 728
BstMAI GTCTC 1 cut(s) 646
BstMCI CGRYCG 2 cut(s) 587, 884
BstMWI GCNNNNNNNGC 2 cut(s) 59, 357
BstNI CCWGG 4 cut(s) 20, 80, 919, 1083
BstPI GGTNACC 2 cut(s) 405, 1025
BstSCI CCNGG 6 cut(s) 18, 78, 198, 544, 917, 1081
BstSFI CTRYAG 1 cut(s) 1211
BstSLI GKGCMC 1 cut(s) 546
BstUI CGCG 2 cut(s) 328, 728
BstV1I GCAGC 3 cut(s) 330, 1201, 1225
BstV2I GAAGAC 1 cut(s) 205
BstX2I RGATCY 2 cut(s) 132, 605
BstYI RGATCY 2 cut(s) 132, 605
Bsu15I ATCGAT 1 cut(s) 618
BsuTUI ATCGAT 1 cut(s) 618
BtgI CCRYGG 2 cut(s) 726, 872
BtsCI GGATG 4 cut(s) 284, 377, 1078, 1110
BtsIMutI CAGTG 1 cut(s) 150
BveI ACCTGC 1 cut(s) 1218
Cac8I GCNNGC 2 cut(s) 362, 1194
Cfr13I GGNCC 6 cut(s) 40, 122, 201, 542, 543, 996
Cfr42I CCGCGG 1 cut(s) 729
ClaI ATCGAT 1 cut(s) 618
Csp6I GTAC 2 cut(s) 280, 462
CviAII CATG 1 cut(s) 1237
CviQI GTAC 2 cut(s) 280, 462
DdeI CTNAG 3 cut(s) 44, 458, 762
EaeI YGGCCR 2 cut(s) 81, 951
Eam1104I CTCTTC 3 cut(s) 763, 1037, 1081
EarI CTCTTC 3 cut(s) 763, 1037, 1081
Eco130I CCWWGG 3 cut(s) 36, 70, 660
Eco147I AGGCCT 2 cut(s) 922, 1233
Eco24I GRGCYC 1 cut(s) 546
Eco47I GGWCC 1 cut(s) 122
Eco57I CTGAAG 4 cut(s) 33, 174, 211, 1018
Eco91I GGTNACC 2 cut(s) 405, 1025
EcoNI CCTNNNNNAGG 1 cut(s) 292
EcoO109I RGGNCCY 1 cut(s) 542
EcoO65I GGTNACC 2 cut(s) 405, 1025
EcoRII CCWGG 4 cut(s) 18, 78, 917, 1081
EcoT14I CCWWGG 3 cut(s) 36, 70, 660
EcoT38I GRGCYC 1 cut(s) 546
ErhI CCWWGG 3 cut(s) 36, 70, 660
FaeI CATG 1 cut(s) 1240
FaiI YATR 7 cut(s) 112, 265, 642, 667, 669, 723, 1238
FaqI GGGAC 2 cut(s) 580, 961
FatI CATG 1 cut(s) 1236
FbaI TGATCA 1 cut(s) 1218
FblI GTMKAC 1 cut(s) 373
Fnu4HI GCNGC 7 cut(s) 76, 344, 726, 729, 780, 1190, 1214
FokI GGATG 4 cut(s) 271, 364, 1065, 1117
FriOI GRGCYC 1 cut(s) 546
Fsp4HI GCNGC 7 cut(s) 76, 344, 726, 729, 780, 1190, 1214
FspBI CTAG 7 cut(s) 71, 233, 563, 867, 890, 980, 1197
GluI GCNGC 7 cut(s) 76, 344, 726, 729, 780, 1190, 1214
GsaI CCCAGC 2 cut(s) 368, 735
GsuI CTGGAG 2 cut(s) 846, 901
HapII CCGG 3 cut(s) 199, 546, 583
Hin1I GRCGYC 1 cut(s) 237
Hin1II CATG 1 cut(s) 1240
HincII GTYRAC 1 cut(s) 322
HindII GTYRAC 1 cut(s) 322
HinfI GANTC 5 cut(s) 517, 849, 983, 1122, 1134
HpaI GTTAAC 1 cut(s) 322
HpaII CCGG 3 cut(s) 199, 546, 583
HphI GGTGA 2 cut(s) 625, 1037
Hpy166II GTNNAC 3 cut(s) 322, 374, 677
Hpy188I TCNGA 1 cut(s) 247
Hpy188III TCNNGA 8 cut(s) 130, 180, 275, 475, 514, 819, 910, 1102
Hpy8I GTNNAC 3 cut(s) 322, 374, 677
Hpy99I CGWCG 3 cut(s) 273, 930, 1120
HpyAV CCTTC 7 cut(s) 176, 342, 420, 508, 690, 828, 1166
HpyCH4III ACNGT 1 cut(s) 510
HpyCH4IV ACGT 2 cut(s) 237, 854
HpyCH4V TGCA 5 cut(s) 346, 485, 946, 1008, 1213
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 357
HpyF3I CTNAG 3 cut(s) 44, 458, 762
HpySE526I ACGT 2 cut(s) 237, 854
Hsp92I GRCGYC 1 cut(s) 237
Hsp92II CATG 1 cut(s) 1240
Ksp22I TGATCA 1 cut(s) 1218
KspAI GTTAAC 1 cut(s) 322
KspI CCGCGG 1 cut(s) 729
LguI GCTCTTC 1 cut(s) 1081
LmnI GCTCC 4 cut(s) 450, 801, 891, 912
Lsp1109I GCAGC 3 cut(s) 330, 1201, 1225
LweI GCATC 1 cut(s) 415
MaeI CTAG 7 cut(s) 71, 233, 563, 867, 890, 980, 1197
MaeII ACGT 2 cut(s) 237, 854
MaeIII GTNAC 2 cut(s) 405, 1025
MboII GAAGA 8 cut(s) 205, 217, 601, 679, 750, 1024, 1098, 1151
MfeI CAATTG 2 cut(s) 170, 947
MflI RGATCY 2 cut(s) 132, 605
MhlI GDGCHC 2 cut(s) 546, 992
MlsI TGGCCA 1 cut(s) 953
MluCI AATT 5 cut(s) 170, 254, 717, 774, 947
MluNI TGGCCA 1 cut(s) 953
MlyI GAGTC 2 cut(s) 992, 1143
MmeI TCCRAC 1 cut(s) 326
Mox20I TGGCCA 1 cut(s) 953
MscI TGGCCA 1 cut(s) 953
MseI TTAA 3 cut(s) 260, 321, 716
Msp20I TGGCCA 1 cut(s) 953
MspA1I CMGCKG 4 cut(s) 728, 1128, 1192, 1216
MspI CCGG 3 cut(s) 199, 546, 583
MspR9I CCNGG 6 cut(s) 20, 80, 200, 546, 919, 1083
MunI CAATTG 2 cut(s) 170, 947
MvaI CCWGG 4 cut(s) 20, 80, 919, 1083
MvnI CGCG 2 cut(s) 328, 728
MwoI GCNNNNNNNGC 2 cut(s) 59, 357
NciI CCSGG 2 cut(s) 200, 546
NlaIII CATG 1 cut(s) 1240
NlaIV GGNNCC 3 cut(s) 134, 544, 997
NmeAIII GCCGAG 3 cut(s) 141, 319, 503
NmuCI GTSAC 1 cut(s) 1025
PaqCI CACCTGC 1 cut(s) 1218
PceI AGGCCT 2 cut(s) 922, 1233
PciSI GCTCTTC 1 cut(s) 1081
PcsI WCGNNNNNNNCGW 1 cut(s) 1115
PfeI GAWTC 3 cut(s) 517, 849, 1122
PfoI TCCNGGA 1 cut(s) 1081
PkrI GCNGC 7 cut(s) 77, 345, 727, 730, 781, 1191, 1215
Ple19I CGATCG 1 cut(s) 884
PleI GAGTC 2 cut(s) 991, 1142
PpsI GAGTC 2 cut(s) 991, 1142
Psp6I CCWGG 4 cut(s) 18, 78, 917, 1081
PspEI GGTNACC 2 cut(s) 405, 1025
PspFI CCCAGC 2 cut(s) 364, 731
PspGI CCWGG 4 cut(s) 18, 78, 917, 1081
PspN4I GGNNCC 3 cut(s) 134, 544, 997
PspOMI GGGCCC 1 cut(s) 542
PspPI GGNCC 6 cut(s) 40, 122, 201, 542, 543, 996
PstI CTGCAG 1 cut(s) 1215
PsuI RGATCY 2 cut(s) 132, 605
PvuI CGATCG 1 cut(s) 884
PvuII CAGCTG 2 cut(s) 1192, 1216
RgaI GCGATCGC 1 cut(s) 884
RsaI GTAC 2 cut(s) 281, 463
RsaNI GTAC 2 cut(s) 280, 462
SacII CCGCGG 1 cut(s) 729
SapI GCTCTTC 1 cut(s) 1081
SaqAI TTAA 3 cut(s) 260, 321, 716
SatI GCNGC 7 cut(s) 76, 344, 726, 729, 780, 1190, 1214
Sau96I GGNCC 6 cut(s) 40, 122, 201, 542, 543, 996
SchI GAGTC 2 cut(s) 992, 1143
ScrFI CCNGG 6 cut(s) 20, 80, 200, 546, 919, 1083
SduI GDGCHC 2 cut(s) 546, 992
SfaAI GCGATCGC 1 cut(s) 884
SfaNI GCATC 1 cut(s) 415
SfcI CTRYAG 1 cut(s) 1211
Sfr303I CCGCGG 1 cut(s) 729
SgfI GCGATCGC 1 cut(s) 884
SgrBI CCGCGG 1 cut(s) 729
SinI GGWCC 1 cut(s) 122
Sse9I AATT 5 cut(s) 170, 254, 717, 774, 947
SseBI AGGCCT 2 cut(s) 922, 1233
SsiI CCGC 5 cut(s) 76, 726, 728, 780, 1126
SspMI CTAG 7 cut(s) 71, 233, 563, 867, 890, 980, 1197
StuI AGGCCT 2 cut(s) 922, 1233
StyD4I CCNGG 6 cut(s) 18, 78, 198, 544, 917, 1081
StyI CCWWGG 3 cut(s) 36, 70, 660
TaaI ACNGT 1 cut(s) 510
TaiI ACGT 2 cut(s) 240, 857
TasI AATT 5 cut(s) 170, 254, 717, 774, 947
TatI WGTACW 1 cut(s) 461
TauI GCSGC 4 cut(s) 78, 728, 731, 782
TfiI GAWTC 3 cut(s) 517, 849, 1122
Tru1I TTAA 3 cut(s) 260, 321, 716
Tru9I TTAA 3 cut(s) 260, 321, 716
TscAI CASTG 1 cut(s) 157
TseFI GTSAC 1 cut(s) 1025
TseI GCWGC 3 cut(s) 343, 1189, 1213
Tsp45I GTSAC 1 cut(s) 1025
TspDTI ATGAA 1 cut(s) 672
TspGWI ACGGA 3 cut(s) 135, 889, 943
TspRI CASTG 1 cut(s) 157
VpaK11BI GGWCC 1 cut(s) 122
XagI CCTNNNNNAGG 1 cut(s) 292
XapI RAATTY 1 cut(s) 254
XmaJI CCTAGG 1 cut(s) 70
XmiI GTMKAC 1 cut(s) 373
XspI CTAG 7 cut(s) 71, 233, 563, 867, 890, 980, 1197
ZraI GACGTC 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.