Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008770.1

Orthogroup ID

OG0000063

Physical Location & Seq

Genomic Coordinates Reverse (-)

12941 .. 15348

Gene Structure 2408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008770.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

atgatgcttggccgtcagattatacccgtcagcattcattcacattcggctgtggagtgctttcgtttcttcttttcaaagaaaggcatgtccaaggatgagtttgtcatatgttacagccgagatcacccttcttgtcttgcgattgacatatcaacattatgggagaagaacttagacttggatgtgattctatcttggggaagtattctgatttctcgggacttgaactacggcctcaaaggtacagtgggtcggtatggtgttgaggagcaatttggcaagtttgagaggtccggcctaaagcctcgttgtccttatcatagagccaccccacacttccaagcatggtggtcgacttttatcatgaaaaatcttggaaaggacttggctgggacccaacgtgctgcattacaaggacttccgaacttgctaggccccaaggaaggtaatggtaagcagaaagcaccggatggcaagtcaaaatcaaccaaaggatcctctaaacaaggacaaacatcgaagaaacgtggctcaacattggagtatactcgaaacgccaagaaaacaaagaaatcattcgatgtggctaatatggatgatggccatgatgctttggctgacaaccaaaatacgtctgaaagtgaggatatggccgaaactggtgacgcctcgatcaatagcgcggactcagctgatagcgaagcttcttcggaagaagctcaatcagaaagtggcgatcaagaggtgggagaatctcgaaacagtacaaccctagaattggctcttctcaaccaaactgaaacacatccccatatgttcggaacacttacctctcctcctaatgatgggatgtgtcaaagtgagcaagctatcgtttgcgctccatcttcggccgagcttgtggtgagtgccttggatcatacagcgggtgatcttggtttggacgtacttcaattcctagatactctagacaacaccaagagtcctgaagaggaaaaacttgaaacaaccgaaaccaaaaaggcacttgagacggtcaaaccgtttttgggttgtgatgtgagaacagtgaccgaggctagttttctctctttcaaggaggcggttgaagtacttatttcagccaatcatttctctcaggtagaggcttatgaagttcatgctcgtttggctgttaagttgaagacttctttgaacgagggaaggcaaaaagtgctcgatctgaggaagcagttggccgaagctgaaaagcaagtcaaagtcacttcggccgccatccgaaccattgttccccaacaagttcttaccaagtatagcttgattctgtcatcggtcaagtcgtataacaagaagtggggaatcttgaagcgaaaggtcgaccaagatatgcaagacttagaagatgttaaagaagctcttcgatcactcttgcccactgattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001525 GO:0001568 GO:0001944 GO:0002155 GO:0002254 GO:0002353 GO:0002526 GO:0003008 GO:0003013 GO:0003073 GO:0003085 GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0008015 GO:0008150 GO:0008152 GO:0008217 GO:0008233 GO:0008238 GO:0008239 GO:0009611 GO:0009653 GO:0009966 GO:0010594 GO:0010632 GO:0010646 GO:0016787 GO:0019222 GO:0019538 GO:0023051 GO:0030334 GO:0031323 GO:0032501 GO:0032502 GO:0032879 GO:0033500 GO:0035239 GO:0035295 GO:0040012 GO:0042060 GO:0042592 GO:0042593 GO:0043170 GO:0043535 GO:0044238 GO:0044464 GO:0045178 GO:0045776 GO:0048514 GO:0048583 GO:0048646 GO:0048731 GO:0048856 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051239 GO:0051270 GO:0060055 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0072358 GO:0072359 GO:0072376 GO:0097009 GO:0140096 GO:1901564 GO:2000145 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04614 ko04974 map04614 map04974

Pfam Domains

Protein Families

Peptidase_S28

Protein Analysis

481

Amino Acids

53.05

Weight (kDa)

5.87

Isoelectric Point (pI)

37.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000063)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica	MD05G1017000.v1.1
prunus_persica	Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis	pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis	RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata	RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora	Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii	Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa	Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha	Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana	Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	356, 548, 1380
AccII	CGCG	1 cut(s)	686
AciI	CCGC	4 cut(s)	686, 929, 1106, 1275
AclWI	GGATC	3 cut(s)	492, 505, 927
AcoI	YGGCCR	6 cut(s)	10, 604, 654, 894, 1239, 1272
AcuI	CTGAAG	1 cut(s)	1011
AcyI	GRCGYC	1 cut(s)	669
AfaI	GTAC	4 cut(s)	247, 769, 951, 1116
AfiI	CCNNNNNNNGG	4 cut(s)	446, 781, 848, 1052
AgsI	TTSAA	9 cut(s)	78, 229, 956, 1007, 1099, 1112, 1186, 1198, 1369
AjuI	GAANNNNNNNTTGG	2 cut(s)	164, 196
AloI	GAACNNNNNNTCC	2 cut(s)	1276, 1308
AluBI	AGCT	8 cut(s)	695, 707, 722, 872, 901, 1247, 1320, 1418
AluI	AGCT	8 cut(s)	695, 707, 722, 872, 901, 1247, 1320, 1418
Alw21I	GWGCWC	1 cut(s)	1221
Alw26I	GTCTC	1 cut(s)	1028
AlwI	GGATC	3 cut(s)	492, 505, 927
Ama87I	CYCGRG	1 cut(s)	219
AoxI	GGCC	9 cut(s)	10, 235, 298, 436, 604, 654, 894, 1239, 1272
ApeKI	GCWGC	1 cut(s)	407
Asp700I	GAANNNNTTC	2 cut(s)	578, 1419
AspLEI	GCGC	2 cut(s)	686, 884
AspS9I	GGNCC	3 cut(s)	294, 396, 437
AsuHPI	GGTGA	4 cut(s)	119, 677, 919, 944
AvaI	CYCGRG	1 cut(s)	219
AvaII	GGWCC	2 cut(s)	294, 396
BalI	TGGCCA	1 cut(s)	606
BamHI	GGATCC	1 cut(s)	497
BbsI	GAAGAC	1 cut(s)	1193
Bbv12I	GWGCWC	1 cut(s)	1221
BbvI	GCAGC	1 cut(s)	394
BccI	CCATC	5 cut(s)	467, 596, 842, 895, 1286
BceAI	ACGGC	1 cut(s)	250
BcgI	CGANNNNNNTGC	2 cut(s)	336, 370
BcoDI	GTCTC	1 cut(s)	1028
BfaI	CTAG	5 cut(s)	434, 776, 962, 971, 1083
BisI	GCNGC	2 cut(s)	408, 1275
BlsI	GCNGC	2 cut(s)	409, 1276
BmcAI	AGTACT	1 cut(s)	1116
Bme18I	GGWCC	2 cut(s)	294, 396
BmeT110I	CYCGRG	1 cut(s)	219
BmgT120I	GGNCC	3 cut(s)	294, 396, 437
BmiI	GGNNCC	4 cut(s)	397, 398, 439, 499
BmsI	GCATC	1 cut(s)	601
BpiI	GAAGAC	1 cut(s)	1193
BpuEI	CTTGAG	1 cut(s)	1052
BsaHI	GRCGYC	1 cut(s)	669
BsaJI	CCNNGG	4 cut(s)	93, 441, 915, 1077
BsaWI	WCCGGW	1 cut(s)	469
BsaXI	ACNNNNNCTCC	2 cut(s)	823, 853
Bsc4I	CCNNNNNNNGG	4 cut(s)	446, 781, 848, 1052
Bse1I	ACTGG	1 cut(s)	667
BseDI	CCNNGG	4 cut(s)	93, 441, 915, 1077
BseGI	GGATG	7 cut(s)	103, 190, 478, 604, 808, 858, 1278
BseLI	CCNNNNNNNGG	4 cut(s)	446, 781, 848, 1052
BseMII	CTCAG	3 cut(s)	705, 1154, 1217
BseNI	ACTGG	1 cut(s)	667
BseRI	GAGGAG	2 cut(s)	284, 828
BseX3I	CGGCCG	2 cut(s)	894, 1272
BseXI	GCAGC	1 cut(s)	394
BseYI	CCCAGC	1 cut(s)	392
Bsh1236I	CGCG	1 cut(s)	686
Bsh1285I	CGRYCG	2 cut(s)	897, 1275
BshFI	GGCC	9 cut(s)	12, 237, 300, 438, 606, 656, 896, 1241, 1274
BsiEI	CGRYCG	2 cut(s)	897, 1275
BsiHKAI	GWGCWC	1 cut(s)	1221
BsiHKCI	CYCGRG	1 cut(s)	219
BsiSI	CCGG	2 cut(s)	297, 470
BslFI	GGGAC	2 cut(s)	236, 409
BslI	CCNNNNNNNGG	4 cut(s)	446, 781, 848, 1052
BsmAI	GTCTC	1 cut(s)	1028
BsmBI	CGTCTC	1 cut(s)	1028
BsmFI	GGGAC	2 cut(s)	236, 409
BsmI	GAATGC	1 cut(s)	33
BsnI	GGCC	9 cut(s)	12, 237, 300, 438, 606, 656, 896, 1241, 1274
BsoBI	CYCGRG	1 cut(s)	219
Bsp1286I	GDGCHC	1 cut(s)	1221
Bsp143I	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
BspACI	CCGC	4 cut(s)	686, 929, 1106, 1275
BspANI	GGCC	9 cut(s)	12, 237, 300, 438, 606, 656, 896, 1241, 1274
BspCNI	CTCAG	3 cut(s)	704, 1153, 1218
BspFNI	CGCG	1 cut(s)	686
BspHI	TCATGA	1 cut(s)	366
BspLI	GGNNCC	4 cut(s)	397, 398, 439, 499
BspPI	GGATC	3 cut(s)	492, 505, 927
BspQI	GCTCTTC	2 cut(s)	792, 1425
BsrI	ACTGG	1 cut(s)	667
BssECI	CCNNGG	4 cut(s)	93, 441, 915, 1077
BssMI	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
BssNAI	GTATAC	1 cut(s)	549
BssNI	GRCGYC	1 cut(s)	669
BssT1I	CCWWGG	3 cut(s)	93, 441, 915
Bst1107I	GTATAC	1 cut(s)	549
Bst4CI	ACNGT	5 cut(s)	250, 767, 1039, 1047, 1072
Bst6I	CTCTTC	3 cut(s)	792, 987, 1425
BstACI	GRCGYC	1 cut(s)	669
BstAPI	GCANNNNNTGC	1 cut(s)	1216
BstC8I	GCNNGC	1 cut(s)	870
BstDEI	CTNAG	5 cut(s)	175, 691, 1140, 1226, 1399
BstF5I	GGATG	7 cut(s)	103, 190, 478, 604, 808, 858, 1278
BstFNI	CGCG	1 cut(s)	686
BstHHI	GCGC	2 cut(s)	686, 884
BstKTI	GATC	8 cut(s)	127, 500, 678, 742, 922, 937, 1225, 1427
BstMAI	GTCTC	1 cut(s)	1028
BstMBI	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
BstMCI	CGRYCG	2 cut(s)	897, 1275
BstMWI	GCNNNNNNNGC	3 cut(s)	692, 1172, 1216
BstNSI	RCATGY	1 cut(s)	91
BstUI	CGCG	1 cut(s)	686
BstV1I	GCAGC	1 cut(s)	394
BstV2I	GAAGAC	1 cut(s)	1193
BstX2I	RGATCY	1 cut(s)	497
BstYI	RGATCY	1 cut(s)	497
BstZ17I	GTATAC	1 cut(s)	549
BstZI	CGGCCG	2 cut(s)	894, 1272
BsuRI	GGCC	9 cut(s)	12, 237, 300, 438, 606, 656, 896, 1241, 1274
BtsCI	GGATG	7 cut(s)	103, 190, 478, 604, 808, 858, 1278
BtsIMutI	CAGTG	3 cut(s)	255, 1077, 1437
Cac8I	GCNNGC	1 cut(s)	870
CciI	TCATGA	1 cut(s)	366
CfoI	GCGC	2 cut(s)	686, 884
Cfr13I	GGNCC	3 cut(s)	294, 396, 437
CseI	GACGC	1 cut(s)	677
Csp6I	GTAC	4 cut(s)	246, 768, 950, 1115
CspCI	CAANNNNNGTGG	2 cut(s)	332, 367
CviAII	CATG	5 cut(s)	88, 348, 367, 608, 1163
CviQI	GTAC	4 cut(s)	246, 768, 950, 1115
DdeI	CTNAG	5 cut(s)	175, 691, 1140, 1226, 1399
DpnI	GATC	8 cut(s)	126, 499, 677, 741, 921, 936, 1224, 1426
DpnII	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
EaeI	YGGCCR	6 cut(s)	10, 604, 654, 894, 1239, 1272
EagI	CGGCCG	2 cut(s)	894, 1272
Eam1104I	CTCTTC	3 cut(s)	792, 987, 1425
EarI	CTCTTC	3 cut(s)	792, 987, 1425
EclXI	CGGCCG	2 cut(s)	894, 1272
Eco130I	CCWWGG	3 cut(s)	93, 441, 915
Eco47I	GGWCC	2 cut(s)	294, 396
Eco52I	CGGCCG	2 cut(s)	894, 1272
Eco57I	CTGAAG	1 cut(s)	1011
Eco88I	CYCGRG	1 cut(s)	219
EcoO109I	RGGNCCY	2 cut(s)	396, 437
EcoT14I	CCWWGG	3 cut(s)	93, 441, 915
ErhI	CCWWGG	3 cut(s)	93, 441, 915
Esp3I	CGTCTC	1 cut(s)	1028
FaeI	CATG	5 cut(s)	91, 351, 370, 611, 1166
FalI	AAGNNNNNCTT	4 cut(s)	1304, 1336, 1404, 1436
FaqI	GGGAC	2 cut(s)	236, 409
FatI	CATG	5 cut(s)	87, 347, 366, 607, 1162
FauI	CCCGC	1 cut(s)	922
FauNDI	CATATG	2 cut(s)	110, 816
FblI	GTMKAC	3 cut(s)	356, 548, 1380
Fnu4HI	GCNGC	2 cut(s)	408, 1275
FokI	GGATG	7 cut(s)	110, 197, 485, 611, 795, 865, 1265
Fsp4HI	GCNGC	2 cut(s)	408, 1275
FspBI	CTAG	5 cut(s)	434, 776, 962, 971, 1083
GlaI	GCGC	2 cut(s)	685, 883
GluI	GCNGC	2 cut(s)	408, 1275
GsaI	CCCAGC	1 cut(s)	396
HaeIII	GGCC	9 cut(s)	12, 237, 300, 438, 606, 656, 896, 1241, 1274
HapII	CCGG	2 cut(s)	297, 470
HgaI	GACGC	1 cut(s)	677
HhaI	GCGC	2 cut(s)	686, 884
Hin1I	GRCGYC	1 cut(s)	669
Hin1II	CATG	5 cut(s)	91, 351, 370, 611, 1166
Hin6I	GCGC	2 cut(s)	684, 882
HinP1I	GCGC	2 cut(s)	684, 882
HincII	GTYRAC	2 cut(s)	357, 1381
HindII	GTYRAC	2 cut(s)	357, 1381
HindIII	AAGCTT	1 cut(s)	705
HinfI	GANTC	6 cut(s)	190, 689, 755, 985, 1324, 1362
HpaII	CCGG	2 cut(s)	297, 470
HphI	GGTGA	4 cut(s)	119, 677, 919, 944
Hpy166II	GTNNAC	3 cut(s)	357, 549, 1381
Hpy188I	TCNGA	9 cut(s)	18, 213, 426, 640, 715, 730, 824, 1227, 1283
Hpy188III	TCNNGA	7 cut(s)	221, 367, 743, 759, 971, 989, 1366
Hpy8I	GTNNAC	3 cut(s)	357, 549, 1381
HpyAV	CCTTC	3 cut(s)	141, 440, 1200
HpyCH4III	ACNGT	5 cut(s)	250, 767, 1039, 1047, 1072
HpyCH4IV	ACGT	4 cut(s)	403, 529, 635, 948
HpyCH4V	TGCA	2 cut(s)	410, 1393
HpyF10VI	GCNNNNNNNGC	3 cut(s)	692, 1172, 1216
HpyF3I	CTNAG	5 cut(s)	175, 691, 1140, 1226, 1399
HpySE526I	ACGT	4 cut(s)	403, 529, 635, 948
Hsp92I	GRCGYC	1 cut(s)	669
Hsp92II	CATG	5 cut(s)	91, 351, 370, 611, 1166
HspAI	GCGC	2 cut(s)	684, 882
KflI	GGGWCCC	1 cut(s)	396
Kzo9I	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
LguI	GCTCTTC	2 cut(s)	792, 1425
LmnI	GCTCC	2 cut(s)	271, 889
LpnPI	CCDG	6 cut(s)	310, 378, 483, 648, 1002, 1127
Lsp1109I	GCAGC	1 cut(s)	394
LweI	GCATC	1 cut(s)	601
MaeI	CTAG	5 cut(s)	434, 776, 962, 971, 1083
MaeII	ACGT	4 cut(s)	403, 529, 635, 948
MaeIII	GTNAC	4 cut(s)	113, 665, 1072, 1264
MalI	GATC	8 cut(s)	126, 499, 677, 741, 921, 936, 1224, 1426
MboI	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
MflI	RGATCY	1 cut(s)	497
MhlI	GDGCHC	1 cut(s)	1221
MlsI	TGGCCA	1 cut(s)	606
MluCI	AATT	3 cut(s)	275, 779, 956
MluNI	TGGCCA	1 cut(s)	606
MlyI	GAGTC	2 cut(s)	683, 994
Mox20I	TGGCCA	1 cut(s)	606
MroXI	GAANNNNTTC	2 cut(s)	578, 1419
MscI	TGGCCA	1 cut(s)	606
MseI	TTAA	2 cut(s)	1179, 1410
Msp20I	TGGCCA	1 cut(s)	606
MspA1I	CMGCKG	2 cut(s)	695, 929
MspI	CCGG	2 cut(s)	297, 470
Mva1269I	GAATGC	1 cut(s)	33
MvnI	CGCG	1 cut(s)	686
MwoI	GCNNNNNNNGC	3 cut(s)	692, 1172, 1216
NdeI	CATATG	2 cut(s)	110, 816
NdeII	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
NlaIII	CATG	5 cut(s)	91, 351, 370, 611, 1166
NlaIV	GGNNCC	4 cut(s)	397, 398, 439, 499
NmeAIII	GCCGAG	2 cut(s)	146, 922
NmuCI	GTSAC	3 cut(s)	665, 1072, 1264
NspI	RCATGY	1 cut(s)	91
PagI	TCATGA	1 cut(s)	366
PciSI	GCTCTTC	2 cut(s)	792, 1425
PcsI	WCGNNNNNNNCGW	2 cut(s)	1043, 1340
PctI	GAATGC	1 cut(s)	33
PdmI	GAANNNNTTC	2 cut(s)	578, 1419
PfeI	GAWTC	4 cut(s)	190, 755, 1324, 1362
PkrI	GCNGC	2 cut(s)	409, 1276
PleI	GAGTC	2 cut(s)	683, 993
PpsI	GAGTC	2 cut(s)	683, 993
PpuMI	RGGWCCY	1 cut(s)	396
Psp5II	RGGWCCY	1 cut(s)	396
PspFI	CCCAGC	1 cut(s)	392
PspN4I	GGNNCC	4 cut(s)	397, 398, 439, 499
PspPI	GGNCC	3 cut(s)	294, 396, 437
PspPPI	RGGWCCY	1 cut(s)	396
PsuI	RGATCY	1 cut(s)	497
PvuII	CAGCTG	1 cut(s)	695
RsaI	GTAC	4 cut(s)	247, 769, 951, 1116
RsaNI	GTAC	4 cut(s)	246, 768, 950, 1115
SalI	GTCGAC	2 cut(s)	355, 1379
SapI	GCTCTTC	2 cut(s)	792, 1425
SaqAI	TTAA	2 cut(s)	1179, 1410
SatI	GCNGC	2 cut(s)	408, 1275
Sau3AI	GATC	8 cut(s)	124, 497, 675, 739, 919, 934, 1222, 1424
Sau96I	GGNCC	3 cut(s)	294, 396, 437
ScaI	AGTACT	1 cut(s)	1116
SchI	GAGTC	2 cut(s)	683, 994
SduI	GDGCHC	1 cut(s)	1221
SfaNI	GCATC	1 cut(s)	601
SinI	GGWCC	2 cut(s)	294, 396
SmlI	CTYRAG	1 cut(s)	1031
SmoI	CTYRAG	1 cut(s)	1031
Sse9I	AATT	3 cut(s)	275, 779, 956
SsiI	CCGC	4 cut(s)	686, 929, 1106, 1275
SspMI	CTAG	5 cut(s)	434, 776, 962, 971, 1083
StyI	CCWWGG	3 cut(s)	93, 441, 915
TaaI	ACNGT	5 cut(s)	250, 767, 1039, 1047, 1072
TaiI	ACGT	4 cut(s)	406, 532, 638, 951
TaqI	TCGA	9 cut(s)	356, 521, 553, 582, 674, 760, 1221, 1380, 1423
TaqII	GACCGA	2 cut(s)	1091, 1324
TasI	AATT	3 cut(s)	275, 779, 956
TatI	WGTACW	2 cut(s)	767, 1114
TauI	GCSGC	1 cut(s)	1277
TfiI	GAWTC	4 cut(s)	190, 755, 1324, 1362
Tru1I	TTAA	2 cut(s)	1179, 1410
Tru9I	TTAA	2 cut(s)	1179, 1410
TscAI	CASTG	3 cut(s)	255, 1077, 1444
TseFI	GTSAC	3 cut(s)	665, 1072, 1264
TseI	GCWGC	1 cut(s)	407
Tsp45I	GTSAC	3 cut(s)	665, 1072, 1264
TspDTI	ATGAA	4 cut(s)	26, 383, 1151, 1170
TspRI	CASTG	3 cut(s)	255, 1077, 1444
VpaK11BI	GGWCC	2 cut(s)	294, 396
XbaI	TCTAGA	1 cut(s)	970
XceI	RCATGY	1 cut(s)	91
XmiI	GTMKAC	3 cut(s)	356, 548, 1380
XmnI	GAANNNNTTC	2 cut(s)	578, 1419
XspI	CTAG	5 cut(s)	434, 776, 962, 971, 1083
ZrmI	AGTACT	1 cut(s)	1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.