Rh1CG229600

elicitor-responsive protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000063
Physical Location & Seq
Forward (+)
48464106 .. 48481961
17856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG229600.1

Sequence Viewer

Length: 1683 bp
ATGTCCAAGGACGAGTTCGCCGTCTGTTACAGCCGAGACTACCCTTCTTGTCTCGCAATCGACATAGCCAAAACGTGGGAGAAAACCTTGGATTTGGATGTGATGCTGCCTTGGGGGAGTATTCTGATACCTCGAGATCTAAATTATGGTCTTAAAGGTACTTTGGGTCGGCCAGGTGTTGAGGTTTATCTACCCAACTTCGTTGCGCGTCAACTTGGTTTTATACAAAGTTGCCCGGCCTTATTCCTTATGTCGCAGAACCGCTTCTCCTCATGGAGAGATAGATTTAGAGACACCGAGCGGTGTTTGGCTGTTACTCTCTACTACCGGACTCAGTTTGGCAAGTTTGAGAGGTCTGGCCTTGAATCTCGTCTTCCTGACCATAGGGCTACCCCAGATTTCCAAACTTGGTGGTCAACTTTTATCAAAAGAAATATCGGCGAAGATTTGATTGAGACCAAGCGGGTCGCCTTGCAGGGACTCTTAGCTTCGTTTGTACCCAAAAAGTGTGATAGTAGAAAGAAAGTATCGAGTTCCAAACTGAAGACAACCAAAGAATCCTCTAAGCAAGGAAAATCAGTGAGGAAGCGTGCCTCATCGTCTAGGTCAGCACCAGCTACCAAGAAATCAAAGGACTCATCTGATGTAGTGGAGAATTCGATCGCGAATCCGACCAATATTTTGGCTAGAGAGGATACATTTTTTGAGGCTAACATGGATGATGACCAGAATGCTTCAAACGAACAACAGAATGTGTCTGAAAACGAGGATGTGTCTGGTATTGGTGATGGGTCAAACGATGGCATGGAGTTGGCTGACAGCGAAAGTTTCTTTGAAGAAAATCTCTTAGAGAACGATGAGTATGAGAGAGATGGCCGTATTGATCACTCTCTGCCTCCTCTTGAGAGCTCCATGGTTGAAATTGACATGGACGATTTGGGTGAGACTCAACTCCCTATTGTTTCTTGCATCGGCCAACAACTCGCCAACTCTGCCAACTCTGCCCAGGATGCTGAAGGTACCGGTGCACTTAGCCGAGAAGTGTTGCCTAACCTTCAAACACTTGTCCAGGTAGGAGAATTTCGAAGTAGTACGACTTTGGAGCTCGCTTTTCTCAACCAAAATGAAGCACACCCTCCTATGTTCGGCACACTTACTTCTCCTCTAACCGAAGGAATGTCCCACAGTGAGCAAGCTGTCGTTTGCGCTCCAACCTCAGCCGAACTTATGGATCGTACGGCGGGCGATCTCGTCGTCTTCTTTGGTTTTCATCTCCGCTATCCAAACATGGCCTACGGGACTCTTGAAGTTGTTCTTGTTGATGCCAAACACCTCCACAACACTGGTTTTCTCACTAAAATGGATCCCTATGTCATTTTCTCTGTGAAGACCCAAGAGAAAATAAGCACTGTGGCCAAAGGCCAAGGATCTAACCCAGAATGGAATGAAAGCTTCTTATTCACAGTGACTGATGATGTGTCCGAACTTCGTTTGAAAATAATGGACAAAGATACCTTCACCGCAGATGATTTTGTTGGAGAAGCAACCATTCCTCTAGACCCAGCATTGTTCGTTCATGGAAGCCTTCCACCAACTTCATACAATGTTGTCAACAAGCACCAGAAATATCGCGGAGAAATCAAAATAGGACTCAATTTCACTCCTGATCCTCAGAACTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2

Protein Analysis

560

Amino Acids

62.52

Weight (kDa)

4.93

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 433 - 529 4.7e-21 C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1019
AccB1I GGYRCC 1 cut(s) 1019
AccB7I CCANNNNNTGG 1 cut(s) 75
AccBSI CCGCTC 1 cut(s) 301
AccII CGCG 3 cut(s) 208, 665, 1632
AciI CCGC 7 cut(s) 262, 301, 463, 1241, 1276, 1521, 1632
AclWI GGATC 5 cut(s) 1239, 1358, 1371, 1435, 1661
AcoI YGGCCR 4 cut(s) 170, 874, 973, 1413
AcsI RAATTY 2 cut(s) 655, 1079
AcuI CTGAAG 2 cut(s) 563, 1035
AfaI GTAC 5 cut(s) 160, 498, 1021, 1093, 1237
AfiI CCNNNNNNNGG 2 cut(s) 75, 1145
AgeI ACCGGT 1 cut(s) 1022
AgsI TTSAA 7 cut(s) 365, 738, 836, 920, 1058, 1307, 1495
AjnI CCWGG 3 cut(s) 172, 1005, 1068
AjuI GAANNNNNNNTTGG 1 cut(s) 31
AloI GAACNNNNNNTCC 2 cut(s) 251, 283
AluBI AGCT 6 cut(s) 488, 617, 909, 1105, 1196, 1452
AluI AGCT 6 cut(s) 488, 617, 909, 1105, 1196, 1452
Alw21I GWGCWC 3 cut(s) 911, 1030, 1107
Alw26I GTCTC 5 cut(s) 30, 56, 285, 449, 938
Alw44I GTGCAC 1 cut(s) 1026
AlwI GGATC 5 cut(s) 1239, 1358, 1371, 1435, 1661
AlwNI CAGNNNCTG 1 cut(s) 1469
Ama87I CYCGRG 1 cut(s) 132
AoxI GGCC 8 cut(s) 170, 237, 358, 874, 973, 1290, 1413, 1420
ApaLI GTGCAC 1 cut(s) 1026
ApeKI GCWGC 1 cut(s) 106
ApoI RAATTY 2 cut(s) 655, 1079
ArsI GACNNNNNNTTYG 2 cut(s) 664, 696
AsiGI ACCGGT 1 cut(s) 1022
Asp700I GAANNNNTTC 2 cut(s) 263, 1311
Asp718I GGTACC 1 cut(s) 1019
AspLEI GCGC 2 cut(s) 208, 1208
AsuC2I CCSGG 1 cut(s) 236
AsuHPI GGTGA 3 cut(s) 797, 953, 1510
AsuII TTCGAA 1 cut(s) 1084
AvaI CYCGRG 1 cut(s) 132
BaeGI GKGCMC 1 cut(s) 1030
BalI TGGCCA 1 cut(s) 1415
BamHI GGATCC 1 cut(s) 1363
BanI GGYRCC 1 cut(s) 1019
BanII GRGCYC 2 cut(s) 911, 1107
BbsI GAAGAC 4 cut(s) 365, 551, 1249, 1394
Bbv12I GWGCWC 3 cut(s) 911, 1030, 1107
BbvCI CCTCAGC 1 cut(s) 1216
BbvI GCAGC 1 cut(s) 93
BccI CCATC 3 cut(s) 782, 794, 866
BceAI ACGGC 3 cut(s) 5, 861, 1254
BciT130I CCWGG 3 cut(s) 174, 1007, 1070
BciVI GTATCC 1 cut(s) 688
BclI TGATCA 1 cut(s) 883
BcnI CCSGG 1 cut(s) 236
BcoDI GTCTC 5 cut(s) 30, 56, 285, 449, 938
BfaI CTAG 3 cut(s) 603, 687, 1556
BfuI GTATCC 1 cut(s) 688
BglII AGATCT 1 cut(s) 136
BisI GCNGC 1 cut(s) 107
BlsI GCNGC 1 cut(s) 108
Bme1390I CCNGG 4 cut(s) 174, 236, 1007, 1070
BmeT110I CYCGRG 1 cut(s) 132
BmiI GGNNCC 2 cut(s) 1021, 1365
BmrFI CCNGG 4 cut(s) 174, 236, 1007, 1070
BmsI GCATC 4 cut(s) 93, 978, 1000, 1312
BpiI GAAGAC 4 cut(s) 365, 551, 1249, 1394
Bpu10I CCTNAGC 1 cut(s) 1216
Bpu14I TTCGAA 1 cut(s) 1084
BpuEI CTTGAG 1 cut(s) 923
BpuMI CCSGG 1 cut(s) 236
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 6 cut(s) 6, 87, 110, 912, 1005, 1423
BsaWI WCCGGW 2 cut(s) 327, 1022
BsaXI ACNNNNNCTCC 2 cut(s) 251, 281
Bsc4I CCNNNNNNNGG 2 cut(s) 75, 1145
Bse118I RCCGGY 1 cut(s) 1022
Bse1I ACTGG 1 cut(s) 1348
BseBI CCWGG 3 cut(s) 174, 1007, 1070
BseDI CCNNGG 6 cut(s) 6, 87, 110, 912, 1005, 1423
BseGI GGATG 4 cut(s) 103, 724, 775, 1015
BseLI CCNNNNNNNGG 2 cut(s) 75, 1145
BseMII CTCAG 2 cut(s) 347, 1230
BseNI ACTGG 1 cut(s) 1348
BseRI GAGGAG 3 cut(s) 259, 888, 1152
BseSI GKGCMC 1 cut(s) 1030
BseXI GCAGC 1 cut(s) 93
BseYI CCCAGC 1 cut(s) 1561
Bsh1236I CGCG 3 cut(s) 208, 665, 1632
Bsh1285I CGRYCG 1 cut(s) 663
BshFI GGCC 8 cut(s) 172, 239, 360, 876, 975, 1292, 1415, 1422
BshNI GGYRCC 1 cut(s) 1019
BshTI ACCGGT 1 cut(s) 1022
BsiEI CGRYCG 1 cut(s) 663
BsiHKAI GWGCWC 3 cut(s) 911, 1030, 1107
BsiHKCI CYCGRG 1 cut(s) 132
BsiSI CCGG 3 cut(s) 236, 328, 1023
BsiWI CGTACG 1 cut(s) 1235
BslFI GGGAC 3 cut(s) 492, 1165, 1312
BslI CCNNNNNNNGG 2 cut(s) 75, 1145
BsmAI GTCTC 5 cut(s) 30, 56, 285, 449, 938
BsmFI GGGAC 3 cut(s) 492, 1165, 1312
BsmI GAATGC 1 cut(s) 736
BsnI GGCC 8 cut(s) 172, 239, 360, 876, 975, 1292, 1415, 1422
Bso31I GGTCTC 1 cut(s) 449
BsoBI CYCGRG 1 cut(s) 132
Bsp119I TTCGAA 1 cut(s) 1084
Bsp1286I GDGCHC 3 cut(s) 911, 1030, 1107
Bsp143I GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
Bsp19I CCATGG 1 cut(s) 912
Bsp68I TCGCGA 1 cut(s) 665
BspACI CCGC 7 cut(s) 262, 301, 463, 1241, 1276, 1521, 1632
BspANI GGCC 8 cut(s) 172, 239, 360, 876, 975, 1292, 1415, 1422
BspCNI CTCAG 2 cut(s) 346, 1229
BspFNI CGCG 3 cut(s) 208, 665, 1632
BspLI GGNNCC 2 cut(s) 1021, 1365
BspPI GGATC 5 cut(s) 1239, 1358, 1371, 1435, 1661
BspT104I TTCGAA 1 cut(s) 1084
BspT107I GGYRCC 1 cut(s) 1019
BspTNI GGTCTC 1 cut(s) 449
BsrBI CCGCTC 1 cut(s) 301
BsrFI RCCGGY 1 cut(s) 1022
BsrI ACTGG 1 cut(s) 1348
BssAI RCCGGY 1 cut(s) 1022
BssECI CCNNGG 6 cut(s) 6, 87, 110, 912, 1005, 1423
BssMI GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
BssT1I CCWWGG 5 cut(s) 6, 87, 110, 912, 1423
Bst2UI CCWGG 3 cut(s) 174, 1007, 1070
Bst4CI ACNGT 3 cut(s) 1187, 1411, 1465
BstBI TTCGAA 1 cut(s) 1084
BstC8I GCNNGC 4 cut(s) 591, 1107, 1194, 1243
BstDEI CTNAG 7 cut(s) 333, 484, 564, 847, 1031, 1216, 1671
BstDSI CCRYGG 1 cut(s) 912
BstF5I GGATG 4 cut(s) 103, 724, 775, 1015
BstFNI CGCG 3 cut(s) 208, 665, 1632
BstHHI GCGC 2 cut(s) 208, 1208
BstKTI GATC 8 cut(s) 139, 663, 886, 1234, 1249, 1366, 1430, 1669
BstMAI GTCTC 5 cut(s) 30, 56, 285, 449, 938
BstMBI GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
BstMCI CGRYCG 1 cut(s) 663
BstMWI GCNNNNNNNGC 3 cut(s) 992, 1001, 1010
BstNI CCWGG 3 cut(s) 174, 1007, 1070
BstSCI CCNGG 4 cut(s) 172, 234, 1005, 1068
BstSLI GKGCMC 1 cut(s) 1030
BstUI CGCG 3 cut(s) 208, 665, 1632
BstV1I GCAGC 1 cut(s) 93
BstV2I GAAGAC 4 cut(s) 365, 551, 1249, 1394
BstX2I RGATCY 3 cut(s) 136, 1363, 1427
BstXI CCANNNNNNTGG 2 cut(s) 682, 1343
BstYI RGATCY 3 cut(s) 136, 1363, 1427
BsuI GTATCC 1 cut(s) 688
BsuRI GGCC 8 cut(s) 172, 239, 360, 876, 975, 1292, 1415, 1422
BtgI CCRYGG 1 cut(s) 912
BtsCI GGATG 4 cut(s) 103, 724, 775, 1015
BtsIMutI CAGTG 5 cut(s) 585, 1192, 1341, 1407, 1470
BtuMI TCGCGA 1 cut(s) 665
Cac8I GCNNGC 4 cut(s) 591, 1107, 1194, 1243
CaiI CAGNNNCTG 1 cut(s) 1469
CfoI GCGC 2 cut(s) 208, 1208
Cfr10I RCCGGY 1 cut(s) 1022
CseI GACGC 1 cut(s) 197
Csp6I GTAC 5 cut(s) 159, 497, 1020, 1092, 1236
CspAI ACCGGT 1 cut(s) 1022
CspCI CAANNNNNGTGG 2 cut(s) 392, 427
CviAII CATG 7 cut(s) 273, 715, 805, 913, 928, 1288, 1577
CviQI GTAC 5 cut(s) 159, 497, 1020, 1092, 1236
DdeI CTNAG 7 cut(s) 333, 484, 564, 847, 1031, 1216, 1671
DpnI GATC 8 cut(s) 138, 662, 885, 1233, 1248, 1365, 1429, 1668
DpnII GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
EaeI YGGCCR 4 cut(s) 170, 874, 973, 1413
Ecl136II GAGCTC 2 cut(s) 909, 1105
Eco130I CCWWGG 5 cut(s) 6, 87, 110, 912, 1423
Eco24I GRGCYC 2 cut(s) 911, 1107
Eco31I GGTCTC 1 cut(s) 449
Eco53kI GAGCTC 2 cut(s) 909, 1105
Eco57I CTGAAG 2 cut(s) 563, 1035
Eco88I CYCGRG 1 cut(s) 132
EcoICRI GAGCTC 2 cut(s) 909, 1105
EcoRI GAATTC 1 cut(s) 655
EcoRII CCWGG 3 cut(s) 172, 1005, 1068
EcoT14I CCWWGG 5 cut(s) 6, 87, 110, 912, 1423
EcoT38I GRGCYC 2 cut(s) 911, 1107
ErhI CCWWGG 5 cut(s) 6, 87, 110, 912, 1423
FaeI CATG 7 cut(s) 276, 718, 808, 916, 931, 1291, 1580
FalI AAGNNNNNCTT 2 cut(s) 1299, 1331
FaqI GGGAC 3 cut(s) 492, 1165, 1312
FatI CATG 7 cut(s) 272, 714, 804, 912, 927, 1287, 1576
FauI CCCGC 2 cut(s) 456, 1234
FbaI TGATCA 1 cut(s) 883
Fnu4HI GCNGC 1 cut(s) 107
FokI GGATG 4 cut(s) 110, 731, 782, 1022
FriOI GRGCYC 2 cut(s) 911, 1107
Fsp4HI GCNGC 1 cut(s) 107
FspBI CTAG 3 cut(s) 603, 687, 1556
GlaI GCGC 2 cut(s) 207, 1207
GluI GCNGC 1 cut(s) 107
GsaI CCCAGC 1 cut(s) 1565
HaeIII GGCC 8 cut(s) 172, 239, 360, 876, 975, 1292, 1415, 1422
HapII CCGG 3 cut(s) 236, 328, 1023
HgaI GACGC 1 cut(s) 197
HhaI GCGC 2 cut(s) 208, 1208
Hin1II CATG 7 cut(s) 276, 718, 808, 916, 931, 1291, 1580
Hin6I GCGC 2 cut(s) 206, 1206
HinP1I GCGC 2 cut(s) 206, 1206
HincII GTYRAC 3 cut(s) 212, 417, 1612
HindII GTYRAC 3 cut(s) 212, 417, 1612
HindIII AAGCTT 1 cut(s) 1450
HinfI GANTC 9 cut(s) 331, 365, 480, 557, 635, 667, 946, 1300, 1650
HpaII CCGG 3 cut(s) 236, 328, 1023
HphI GGTGA 3 cut(s) 797, 953, 1510
Hpy166II GTNNAC 4 cut(s) 212, 417, 1028, 1612
Hpy188I TCNGA 6 cut(s) 126, 643, 672, 760, 1483, 1674
Hpy188III TCNNGA 7 cut(s) 134, 377, 664, 902, 1304, 1556, 1664
Hpy8I GTNNAC 4 cut(s) 212, 417, 1028, 1612
Hpy99I CGWCG 1 cut(s) 1256
HpyAV CCTTC 6 cut(s) 54, 1010, 1064, 1166, 1525, 1595
HpyCH4III ACNGT 3 cut(s) 1187, 1411, 1465
HpyCH4IV ACGT 1 cut(s) 74
HpyCH4V TGCA 3 cut(s) 475, 969, 1028
HpyF10VI GCNNNNNNNGC 3 cut(s) 992, 1001, 1010
HpyF3I CTNAG 7 cut(s) 333, 484, 564, 847, 1031, 1216, 1671
HpySE526I ACGT 1 cut(s) 74
Hsp92II CATG 7 cut(s) 276, 718, 808, 916, 931, 1291, 1580
HspAI GCGC 2 cut(s) 206, 1206
KpnI GGTACC 1 cut(s) 1023
Ksp22I TGATCA 1 cut(s) 883
Kzo9I GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
LmnI GCTCC 3 cut(s) 914, 1102, 1213
Lsp1109I GCAGC 1 cut(s) 93
LweI GCATC 4 cut(s) 93, 978, 1000, 1312
MaeI CTAG 3 cut(s) 603, 687, 1556
MaeII ACGT 1 cut(s) 74
MaeIII GTNAC 3 cut(s) 26, 313, 1465
MalI GATC 8 cut(s) 138, 662, 885, 1233, 1248, 1365, 1429, 1668
MbiI CCGCTC 1 cut(s) 301
MboI GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
MboII GAAGA 6 cut(s) 365, 455, 556, 848, 1249, 1399
MflI RGATCY 3 cut(s) 136, 1363, 1427
MhlI GDGCHC 3 cut(s) 911, 1030, 1107
MlsI TGGCCA 1 cut(s) 1415
MluCI AATT 5 cut(s) 142, 655, 921, 1079, 1654
MluNI TGGCCA 1 cut(s) 1415
MlyI GAGTC 6 cut(s) 325, 474, 629, 940, 1294, 1644
MmeI TCCRAC 3 cut(s) 695, 1235, 1516
Mox20I TGGCCA 1 cut(s) 1415
MroXI GAANNNNTTC 2 cut(s) 263, 1311
MscI TGGCCA 1 cut(s) 1415
MseI TTAA 1 cut(s) 153
MslI CAYNNNNRTG 1 cut(s) 1358
Msp20I TGGCCA 1 cut(s) 1415
MspI CCGG 3 cut(s) 236, 328, 1023
MspR9I CCNGG 4 cut(s) 174, 236, 1007, 1070
Mva1269I GAATGC 1 cut(s) 736
MvaI CCWGG 3 cut(s) 174, 1007, 1070
MvnI CGCG 3 cut(s) 208, 665, 1632
MwoI GCNNNNNNNGC 3 cut(s) 992, 1001, 1010
NciI CCSGG 1 cut(s) 236
NcoI CCATGG 1 cut(s) 912
NdeII GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
NlaIII CATG 7 cut(s) 276, 718, 808, 916, 931, 1291, 1580
NlaIV GGNNCC 2 cut(s) 1021, 1365
NmeAIII GCCGAG 2 cut(s) 59, 1061
NmuCI GTSAC 1 cut(s) 1465
NruI TCGCGA 1 cut(s) 665
NspV TTCGAA 1 cut(s) 1084
PaeR7I CTCGAG 1 cut(s) 132
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PctI GAATGC 1 cut(s) 736
PdmI GAANNNNTTC 2 cut(s) 263, 1311
PfeI GAWTC 3 cut(s) 365, 557, 667
Pfl23II CGTACG 1 cut(s) 1235
PflMI CCANNNNNTGG 1 cut(s) 75
PinAI ACCGGT 1 cut(s) 1022
PkrI GCNGC 1 cut(s) 108
Ple19I CGATCG 1 cut(s) 663
PleI GAGTC 6 cut(s) 325, 474, 629, 940, 1294, 1644
PpsI GAGTC 6 cut(s) 325, 474, 629, 940, 1294, 1644
Psp124BI GAGCTC 2 cut(s) 911, 1107
Psp6I CCWGG 3 cut(s) 172, 1005, 1068
PspFI CCCAGC 1 cut(s) 1561
PspGI CCWGG 3 cut(s) 172, 1005, 1068
PspLI CGTACG 1 cut(s) 1235
PspN4I GGNNCC 2 cut(s) 1021, 1365
PstNI CAGNNNCTG 1 cut(s) 1469
PsuI RGATCY 3 cut(s) 136, 1363, 1427
PvuI CGATCG 1 cut(s) 663
RruI TCGCGA 1 cut(s) 665
RsaI GTAC 5 cut(s) 160, 498, 1021, 1093, 1237
RsaNI GTAC 5 cut(s) 159, 497, 1020, 1092, 1236
RseI CAYNNNNRTG 1 cut(s) 1358
SacI GAGCTC 2 cut(s) 911, 1107
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 1 cut(s) 107
Sau3AI GATC 8 cut(s) 136, 660, 883, 1231, 1246, 1363, 1427, 1666
SchI GAGTC 6 cut(s) 325, 474, 629, 940, 1294, 1644
ScrFI CCNGG 4 cut(s) 174, 236, 1007, 1070
SduI GDGCHC 3 cut(s) 911, 1030, 1107
SfaNI GCATC 4 cut(s) 93, 978, 1000, 1312
Sfr274I CTCGAG 1 cut(s) 132
SfuI TTCGAA 1 cut(s) 1084
SlaI CTCGAG 1 cut(s) 132
SmiMI CAYNNNNRTG 1 cut(s) 1358
SmlI CTYRAG 2 cut(s) 132, 902
SmoI CTYRAG 2 cut(s) 132, 902
Sse9I AATT 5 cut(s) 142, 655, 921, 1079, 1654
SsiI CCGC 7 cut(s) 262, 301, 463, 1241, 1276, 1521, 1632
SspI AATATT 1 cut(s) 679
SspMI CTAG 3 cut(s) 603, 687, 1556
SstI GAGCTC 2 cut(s) 911, 1107
StyD4I CCNGG 4 cut(s) 172, 234, 1005, 1068
StyI CCWWGG 5 cut(s) 6, 87, 110, 912, 1423
TaaI ACNGT 3 cut(s) 1187, 1411, 1465
TaiI ACGT 1 cut(s) 77
TaqI TCGA 5 cut(s) 60, 133, 530, 659, 1084
TasI AATT 5 cut(s) 142, 655, 921, 1079, 1654
TfiI GAWTC 3 cut(s) 365, 557, 667
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TscAI CASTG 5 cut(s) 585, 1192, 1348, 1414, 1470
TseFI GTSAC 1 cut(s) 1465
TseI GCWGC 1 cut(s) 106
Tsp45I GTSAC 1 cut(s) 1465
TspDTI ATGAA 5 cut(s) 1140, 1259, 1461, 1565, 1587
TspRI CASTG 5 cut(s) 585, 1192, 1348, 1414, 1470
Van91I CCANNNNNTGG 1 cut(s) 75
VneI GTGCAC 1 cut(s) 1026
XapI RAATTY 2 cut(s) 655, 1079
XbaI TCTAGA 1 cut(s) 1555
XhoI CTCGAG 1 cut(s) 132
XmnI GAANNNNTTC 2 cut(s) 263, 1311
XspI CTAG 3 cut(s) 603, 687, 1556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.