Rmu_sc0005802.1_g000015

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005802.1
OG0000063
Physical Location & Seq
Reverse (-)
62655 .. 64825
2171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005802.1_g000015.1.cds

Sequence Viewer

Length: 1689 bp
atggcttcgaaagggaccggagaagacaattatgaaggcaagcaaaaaagtatcaccaaacgctcatttgcattggcggaagcactaagtcaagccactgaaaagaatgcctcggccttcatgaatagaataacacaacgagtcccgaatgaaggtgggggagcatggggaacaaaaccaggaaaatggcctggtgaaacggccaactggattccgtgggtagaacgagtcgagaagcgatttggggaaatttggaaacgacttgggatctatgacgccatcaagctgtccaccattactattccttgtgaccgctccttgctggctgccgctatgtgtttttggagttctcaaacaaactctctggagcttcagtttggtgcacttagtccgaccttgattgatatagcggccattataggcttaccgccacatgggcaagtggtggacattgtatttgcagaaggaaagtgtgacattgatctgggttgcgagctaagagatcgaactaagggcagactaaccgttgctaattttaatacatggattgaggtgtttaacaacggtttgggaaataagttacttgatagtattggcagtccggaagagaaaggggaaagccaacaggagacaatggaagtaactcatgtagagcatgctgcgtttcttgccttttggatatgtaagtacttagtgtgcacaacttctaaaaaagtgaatgtggagtactacaagttggctgaagcattagcaagtaaagaagtacaagagagcgatcagccattagctcttggtccatttgtgcttgcccacttatacagatgtcttcaccactgtgtgaccgaaggactgaatccaaattggtctgggccattgtggatttttcagttgtggctgcacacttactttccctctttcaaacagccgggtttagcattggcagtagacaccactcttggacaacaattggctcctcttgatttacttcctcattcggcagaagagtgttttgaggtgttgttcaagtgtccagagttttctgcagaacagtttgccgtttgtttcagtaggaagtatctaccctaccttgcaatggatatcagccaacacgcctcagaaagcgagatgagatgggagactgcgtgttcagcttggaagagtgaaataggtatgagggatctcttctggggtgccttgtctggtaaaacactcaagtgtggagtggagttatattcaccatcctatttcagtcgtcagttgggatattatcaagctataccggctccggcgccagaatcgtcaaaccgatatagttcattgcgagccgttttctccaacaaggacgacattgagcagaatagcaaggcgtttgtgtacaacatgagatttcccatgaagacaagagtagcaactagcaagagaaatccatgggcacaagagaagccgaaagctgtaaggcgtggtggccaagagtctttgaagaagtgtgctaaaggtagcacaaagagaaaggccatccatagtgcggccactgaggcggccaaagatggtgccaccatgtcttcaacgtctcaatctcctccagcgaaacaatcggcaaaacaagacgagcaaccctctgagagtgaagaacaattgtgcgtggccaaacgaagtcgcctagatacattcaagaaggccaacgtctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

562

Amino Acids

62.63

Weight (kDa)

8.36

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 1190, 1288, 1550
AccBSI CCGCTC 1 cut(s) 315
AccI GTMKAC 1 cut(s) 945
AccIII TCCGGA 1 cut(s) 601
AciI CCGC 7 cut(s) 77, 313, 330, 410, 428, 1526, 1538
AclWI GGATC 2 cut(s) 275, 1185
AcoI YGGCCR 6 cut(s) 201, 411, 1465, 1527, 1539, 1644
AcsI RAATTY 1 cut(s) 249
AcuI CTGAAG 2 cut(s) 356, 762
AcyI GRCGYC 2 cut(s) 276, 1289
AdeI CACNNNGTG 1 cut(s) 838
AfaI GTAC 4 cut(s) 689, 728, 765, 1376
AfiI CCNNNNNNNGG 4 cut(s) 152, 434, 1093, 1525
AgsI TTSAA 5 cut(s) 919, 1024, 1480, 1566, 1672
AjnI CCWGG 2 cut(s) 178, 190
AleI CACNNNNGTG 2 cut(s) 834, 1213
AluBI AGCT 7 cut(s) 286, 370, 496, 788, 1151, 1274, 1451
AluI AGCT 7 cut(s) 286, 370, 496, 788, 1151, 1274, 1451
Alw21I GWGCWC 2 cut(s) 385, 701
Alw26I GTCTC 3 cut(s) 623, 1130, 1575
Alw44I GTGCAC 2 cut(s) 381, 697
AlwI GGATC 2 cut(s) 275, 1185
Aor13HI TCCGGA 1 cut(s) 601
ApaLI GTGCAC 2 cut(s) 381, 697
ApeKI GCWGC 3 cut(s) 326, 659, 895
ApoI RAATTY 1 cut(s) 249
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
AspLEI GCGC 1 cut(s) 1291
AspS9I GGNCC 3 cut(s) 15, 794, 869
AsuC2I CCSGG 1 cut(s) 927
AsuHPI GGTGA 4 cut(s) 46, 206, 821, 1227
AsuII TTCGAA 1 cut(s) 8
AvaII GGWCC 2 cut(s) 15, 794
BaeGI GKGCMC 3 cut(s) 385, 701, 1435
BalI TGGCCA 2 cut(s) 1467, 1646
BanI GGYRCC 3 cut(s) 1190, 1288, 1550
BbsI GAAGAC 4 cut(s) 30, 818, 1403, 1554
Bbv12I GWGCWC 2 cut(s) 385, 701
BbvI GCAGC 3 cut(s) 313, 646, 882
BccI CCATC 5 cut(s) 287, 1125, 1246, 1523, 1541
BceAI ACGGC 3 cut(s) 216, 1040, 1310
BciT130I CCWGG 2 cut(s) 180, 192
BcnI CCSGG 1 cut(s) 927
BcoDI GTCTC 3 cut(s) 623, 1130, 1575
BfaI CTAG 2 cut(s) 1413, 1661
BfmI CTRYAG 1 cut(s) 1041
BfoI RGCGCY 1 cut(s) 1292
BglI GCCNNNNNGGC 2 cut(s) 436, 1535
BisI GCNGC 7 cut(s) 327, 330, 411, 660, 896, 1527, 1539
BlsI GCNGC 7 cut(s) 328, 331, 412, 661, 897, 1528, 1540
BmcAI AGTACT 2 cut(s) 689, 728
Bme1390I CCNGG 3 cut(s) 180, 192, 927
Bme18I GGWCC 2 cut(s) 15, 794
BmgT120I GGNCC 3 cut(s) 15, 794, 869
BmiI GGNNCC 6 cut(s) 16, 972, 1192, 1284, 1290, 1552
BmrFI CCNGG 3 cut(s) 180, 192, 927
BpiI GAAGAC 4 cut(s) 30, 818, 1403, 1554
BplI GAGNNNNNCTC 2 cut(s) 1601, 1633
BpmI CTGGAG 2 cut(s) 386, 1566
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 1 cut(s) 1196
BpuMI CCSGG 1 cut(s) 927
BsaHI GRCGYC 2 cut(s) 276, 1289
BsaJI CCNNGG 3 cut(s) 111, 215, 1427
BsaWI WCCGGW 2 cut(s) 17, 601
BsaXI ACNNNNNCTCC 4 cut(s) 359, 389, 1127, 1157
Bsc4I CCNNNNNNNGG 4 cut(s) 152, 434, 1093, 1525
Bse118I RCCGGY 1 cut(s) 1279
Bse1I ACTGG 1 cut(s) 212
Bse3DI GCAATG 2 cut(s) 1098, 1316
BseAI TCCGGA 1 cut(s) 601
BseBI CCWGG 2 cut(s) 180, 192
BseDI CCNNGG 3 cut(s) 111, 215, 1427
BseGI GGATG 2 cut(s) 1238, 1515
BseLI CCNNNNNNNGG 4 cut(s) 152, 434, 1093, 1525
BseMI GCAATG 2 cut(s) 1098, 1316
BseMII CTCAG 3 cut(s) 1128, 1524, 1611
BseNI ACTGG 1 cut(s) 212
BseRI GAGGAG 2 cut(s) 963, 1569
BseSI GKGCMC 3 cut(s) 385, 701, 1435
BseXI GCAGC 3 cut(s) 313, 646, 882
BsgI GTGCAG 1 cut(s) 881
BshNI GGYRCC 3 cut(s) 1190, 1288, 1550
BsiHKAI GWGCWC 2 cut(s) 385, 701
BsiSI CCGG 5 cut(s) 18, 602, 926, 1280, 1286
BslFI GGGAC 2 cut(s) 28, 128
BslI CCNNNNNNNGG 4 cut(s) 152, 434, 1093, 1525
BsmAI GTCTC 3 cut(s) 623, 1130, 1575
BsmBI CGTCTC 1 cut(s) 1575
BsmFI GGGAC 2 cut(s) 28, 128
BsmI GAATGC 1 cut(s) 112
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 3 cut(s) 385, 701, 1435
Bsp13I TCCGGA 1 cut(s) 601
Bsp1407I TGTACA 1 cut(s) 1374
Bsp143I GATC 5 cut(s) 267, 481, 502, 775, 1177
Bsp19I CCATGG 1 cut(s) 1427
BspACI CCGC 7 cut(s) 77, 313, 330, 410, 428, 1526, 1538
BspCNI CTCAG 3 cut(s) 1127, 1525, 1612
BspEI TCCGGA 1 cut(s) 601
BspHI TCATGA 1 cut(s) 120
BspLI GGNNCC 6 cut(s) 16, 972, 1192, 1284, 1290, 1552
BspMAI CTGCAG 1 cut(s) 1045
BspPI GGATC 2 cut(s) 275, 1185
BspT104I TTCGAA 1 cut(s) 8
BspT107I GGYRCC 3 cut(s) 1190, 1288, 1550
BsrBI CCGCTC 1 cut(s) 315
BsrDI GCAATG 2 cut(s) 1098, 1316
BsrFI RCCGGY 1 cut(s) 1279
BsrGI TGTACA 1 cut(s) 1374
BsrI ACTGG 1 cut(s) 212
BssAI RCCGGY 1 cut(s) 1279
BssECI CCNNGG 3 cut(s) 111, 215, 1427
BssMI GATC 5 cut(s) 267, 481, 502, 775, 1177
BssNI GRCGYC 2 cut(s) 276, 1289
BssT1I CCWWGG 1 cut(s) 1427
Bst2UI CCWGG 2 cut(s) 180, 192
Bst4CI ACNGT 4 cut(s) 526, 566, 836, 1050
Bst6I CTCTTC 4 cut(s) 600, 996, 1151, 1187
BstACI GRCGYC 2 cut(s) 276, 1289
BstAUI TGTACA 1 cut(s) 1374
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 6 cut(s) 41, 324, 494, 657, 807, 1323
BstDEI CTNAG 8 cut(s) 86, 386, 497, 510, 691, 1114, 1533, 1620
BstDSI CCRYGG 2 cut(s) 215, 1427
BstF5I GGATG 2 cut(s) 1238, 1515
BstH2I RGCGCY 1 cut(s) 1292
BstHHI GCGC 1 cut(s) 1291
BstKTI GATC 5 cut(s) 270, 484, 505, 778, 1180
BstMAI GTCTC 3 cut(s) 623, 1130, 1575
BstMBI GATC 5 cut(s) 267, 481, 502, 775, 1177
BstMWI GCNNNNNNNGC 5 cut(s) 436, 668, 1148, 1280, 1535
BstNI CCWGG 2 cut(s) 180, 192
BstNSI RCATGY 1 cut(s) 659
BstSCI CCNGG 3 cut(s) 178, 190, 925
BstSFI CTRYAG 1 cut(s) 1041
BstSLI GKGCMC 3 cut(s) 385, 701, 1435
BstV1I GCAGC 3 cut(s) 313, 646, 882
BstV2I GAAGAC 4 cut(s) 30, 818, 1403, 1554
BstX2I RGATCY 2 cut(s) 267, 1177
BstXI CCANNNNNNTGG 1 cut(s) 186
BstYI RGATCY 2 cut(s) 267, 1177
BtgI CCRYGG 2 cut(s) 215, 1427
BtsCI GGATG 2 cut(s) 1238, 1515
BtsIMutI CAGTG 3 cut(s) 96, 832, 1530
Cac8I GCNNGC 6 cut(s) 41, 324, 494, 657, 807, 1323
CciI TCATGA 1 cut(s) 120
CfoI GCGC 1 cut(s) 1291
Cfr10I RCCGGY 1 cut(s) 1279
Cfr13I GGNCC 3 cut(s) 15, 794, 869
CseI GACGC 1 cut(s) 284
Csp6I GTAC 4 cut(s) 688, 727, 764, 1375
CviQI GTAC 4 cut(s) 688, 727, 764, 1375
DdeI CTNAG 8 cut(s) 86, 386, 497, 510, 691, 1114, 1533, 1620
DinI GGCGCC 1 cut(s) 1290
DpnI GATC 5 cut(s) 269, 483, 504, 777, 1179
DpnII GATC 5 cut(s) 267, 481, 502, 775, 1177
DraIII CACNNNGTG 1 cut(s) 838
EaeI YGGCCR 6 cut(s) 201, 411, 1465, 1527, 1539, 1644
Eam1104I CTCTTC 4 cut(s) 600, 996, 1151, 1187
EarI CTCTTC 4 cut(s) 600, 996, 1151, 1187
EciI GGCGGA 1 cut(s) 92
Eco130I CCWWGG 1 cut(s) 1427
Eco32I GATATC 1 cut(s) 1099
Eco47I GGWCC 2 cut(s) 15, 794
Eco57I CTGAAG 2 cut(s) 356, 762
EcoRII CCWGG 2 cut(s) 178, 190
EcoRV GATATC 1 cut(s) 1099
EcoT14I CCWWGG 1 cut(s) 1427
EgeI GGCGCC 1 cut(s) 1290
EheI GGCGCC 1 cut(s) 1290
ErhI CCWWGG 1 cut(s) 1427
Esp3I CGTCTC 1 cut(s) 1575
FaqI GGGAC 2 cut(s) 28, 128
FblI GTMKAC 1 cut(s) 945
Fnu4HI GCNGC 7 cut(s) 327, 330, 411, 660, 896, 1527, 1539
FokI GGATG 2 cut(s) 1225, 1502
Fsp4HI GCNGC 7 cut(s) 327, 330, 411, 660, 896, 1527, 1539
FspBI CTAG 2 cut(s) 1413, 1661
GlaI GCGC 1 cut(s) 1290
GluI GCNGC 7 cut(s) 327, 330, 411, 660, 896, 1527, 1539
GsuI CTGGAG 2 cut(s) 386, 1566
HaeII RGCGCY 1 cut(s) 1292
HapII CCGG 5 cut(s) 18, 602, 926, 1280, 1286
HgaI GACGC 1 cut(s) 284
HhaI GCGC 1 cut(s) 1291
Hin1I GRCGYC 2 cut(s) 276, 1289
Hin6I GCGC 1 cut(s) 1289
HinP1I GCGC 1 cut(s) 1289
HinfI GANTC 6 cut(s) 141, 211, 228, 853, 1295, 1472
HpaII CCGG 5 cut(s) 18, 602, 926, 1280, 1286
HphI GGTGA 4 cut(s) 46, 206, 821, 1227
Hpy166II GTNNAC 6 cut(s) 291, 383, 448, 699, 946, 1375
Hpy188I TCNGA 3 cut(s) 393, 1117, 1621
Hpy188III TCNNGA 8 cut(s) 121, 145, 232, 365, 602, 977, 1031, 1672
Hpy8I GTNNAC 6 cut(s) 291, 383, 448, 699, 946, 1375
HpyAV CCTTC 6 cut(s) 29, 127, 146, 458, 839, 1669
HpyCH4III ACNGT 4 cut(s) 526, 566, 836, 1050
HpyCH4IV ACGT 2 cut(s) 1568, 1683
HpyCH4V TGCA 7 cut(s) 71, 383, 461, 699, 898, 1043, 1091
HpyF10VI GCNNNNNNNGC 5 cut(s) 436, 668, 1148, 1280, 1535
HpyF3I CTNAG 8 cut(s) 86, 386, 497, 510, 691, 1114, 1533, 1620
HpySE526I ACGT 2 cut(s) 1568, 1683
Hsp92I GRCGYC 2 cut(s) 276, 1289
HspAI GCGC 1 cut(s) 1289
KasI GGCGCC 1 cut(s) 1288
Kpn2I TCCGGA 1 cut(s) 601
Kzo9I GATC 5 cut(s) 267, 481, 502, 775, 1177
LmnI GCTCC 5 cut(s) 161, 320, 367, 976, 1288
Lsp1109I GCAGC 3 cut(s) 313, 646, 882
MaeI CTAG 2 cut(s) 1413, 1661
MaeII ACGT 2 cut(s) 1568, 1683
MaeIII GTNAC 5 cut(s) 308, 473, 579, 640, 838
MalI GATC 5 cut(s) 269, 483, 504, 777, 1179
MbiI CCGCTC 1 cut(s) 315
MboI GATC 5 cut(s) 267, 481, 502, 775, 1177
MfeI CAATTG 2 cut(s) 965, 1634
MflI RGATCY 2 cut(s) 267, 1177
MhlI GDGCHC 3 cut(s) 385, 701, 1435
MlsI TGGCCA 2 cut(s) 1467, 1646
MluCI AATT 6 cut(s) 28, 249, 532, 859, 965, 1634
MluNI TGGCCA 2 cut(s) 1467, 1646
Mly113I GGCGCC 1 cut(s) 1289
MlyI GAGTC 3 cut(s) 150, 237, 1481
MmeI TCCRAC 2 cut(s) 416, 1359
Mox20I TGGCCA 2 cut(s) 1467, 1646
MroI TCCGGA 1 cut(s) 601
MscI TGGCCA 2 cut(s) 1467, 1646
MseI TTAA 2 cut(s) 537, 558
MslI CAYNNNNRTG 2 cut(s) 834, 1213
Msp20I TGGCCA 2 cut(s) 1467, 1646
MspI CCGG 5 cut(s) 18, 602, 926, 1280, 1286
MspR9I CCNGG 3 cut(s) 180, 192, 927
MunI CAATTG 2 cut(s) 965, 1634
Mva1269I GAATGC 1 cut(s) 112
MvaI CCWGG 2 cut(s) 180, 192
MwoI GCNNNNNNNGC 5 cut(s) 436, 668, 1148, 1280, 1535
NarI GGCGCC 1 cut(s) 1289
NciI CCSGG 1 cut(s) 927
NcoI CCATGG 1 cut(s) 1427
NdeII GATC 5 cut(s) 267, 481, 502, 775, 1177
NlaIV GGNNCC 6 cut(s) 16, 972, 1192, 1284, 1290, 1552
NmeAIII GCCGAG 1 cut(s) 92
NmuCI GTSAC 3 cut(s) 308, 473, 838
NspI RCATGY 1 cut(s) 659
NspV TTCGAA 1 cut(s) 8
OliI CACNNNNGTG 2 cut(s) 834, 1213
PaeI GCATGC 1 cut(s) 659
PagI TCATGA 1 cut(s) 120
PctI GAATGC 1 cut(s) 112
PfeI GAWTC 3 cut(s) 211, 853, 1295
PkrI GCNGC 7 cut(s) 328, 331, 412, 661, 897, 1528, 1540
PleI GAGTC 3 cut(s) 149, 236, 1480
PluTI GGCGCC 1 cut(s) 1292
PpsI GAGTC 3 cut(s) 149, 236, 1480
Psp6I CCWGG 2 cut(s) 178, 190
PspGI CCWGG 2 cut(s) 178, 190
PspN4I GGNNCC 6 cut(s) 16, 972, 1192, 1284, 1290, 1552
PspPI GGNCC 3 cut(s) 15, 794, 869
PstI CTGCAG 1 cut(s) 1045
PsuI RGATCY 2 cut(s) 267, 1177
RsaI GTAC 4 cut(s) 689, 728, 765, 1376
RsaNI GTAC 4 cut(s) 688, 727, 764, 1375
RseI CAYNNNNRTG 2 cut(s) 834, 1213
SaqAI TTAA 2 cut(s) 537, 558
SatI GCNGC 7 cut(s) 327, 330, 411, 660, 896, 1527, 1539
Sau3AI GATC 5 cut(s) 267, 481, 502, 775, 1177
Sau96I GGNCC 3 cut(s) 15, 794, 869
ScaI AGTACT 2 cut(s) 689, 728
SchI GAGTC 3 cut(s) 150, 237, 1481
ScrFI CCNGG 3 cut(s) 180, 192, 927
SduI GDGCHC 3 cut(s) 385, 701, 1435
SfcI CTRYAG 1 cut(s) 1041
SfoI GGCGCC 1 cut(s) 1290
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 2 cut(s) 15, 794
SmiMI CAYNNNNRTG 2 cut(s) 834, 1213
SmlI CTYRAG 1 cut(s) 1211
SmoI CTYRAG 1 cut(s) 1211
SphI GCATGC 1 cut(s) 659
Sse9I AATT 6 cut(s) 28, 249, 532, 859, 965, 1634
SsiI CCGC 7 cut(s) 77, 313, 330, 410, 428, 1526, 1538
SspDI GGCGCC 1 cut(s) 1288
SspMI CTAG 2 cut(s) 1413, 1661
StyD4I CCNGG 3 cut(s) 178, 190, 925
StyI CCWWGG 1 cut(s) 1427
TaaI ACNGT 4 cut(s) 526, 566, 836, 1050
TaiI ACGT 2 cut(s) 1571, 1686
TaqI TCGA 3 cut(s) 8, 231, 505
TaqII GACCGA 1 cut(s) 857
TasI AATT 6 cut(s) 28, 249, 532, 859, 965, 1634
TatI WGTACW 4 cut(s) 687, 726, 763, 1374
TauI GCSGC 4 cut(s) 332, 413, 1529, 1541
TfiI GAWTC 3 cut(s) 211, 853, 1295
Tru1I TTAA 2 cut(s) 537, 558
Tru9I TTAA 2 cut(s) 537, 558
TscAI CASTG 3 cut(s) 103, 839, 1537
TseFI GTSAC 3 cut(s) 308, 473, 838
TseI GCWGC 3 cut(s) 326, 659, 895
Tsp45I GTSAC 3 cut(s) 308, 473, 838
TspDTI ATGAA 6 cut(s) 48, 109, 137, 165, 1305, 1409
TspGWI ACGGA 1 cut(s) 204
TspRI CASTG 3 cut(s) 103, 839, 1537
VneI GTGCAC 2 cut(s) 381, 697
VpaK11BI GGWCC 2 cut(s) 15, 794
XapI RAATTY 1 cut(s) 249
XceI RCATGY 1 cut(s) 659
XmiI GTMKAC 1 cut(s) 945
XspI CTAG 2 cut(s) 1413, 1661
ZrmI AGTACT 2 cut(s) 689, 728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.