RchiOBHm_Chr3g0493631

dipeptidyl-peptidase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
40916512 .. 40920016
3505 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45637

Sequence Viewer

Length: 2109 bp
ATGGCTGATGATGCTTCAGAACATGAGGCCGGGTCGGAGGGTAGAGATGCAATAAAAACAAGATCGGCCGAGTTCGCAACCAAGTTTATGAAGGCTGTCGATGTTTCCAAAGATGCACTTCAGAGCCCCGTGGTTTGTCGGTTGACGAAAAATAAAGAGCCGCAAGGAGAATGTATACTAGGGCCGCATTACGGTGCGGGCATGCCATCGGCTGTCAAAGAGGTTCTAGAAAATTCGTTAGTTGATTCATCTTGTTGCACACATGGAGCTAGTTGGTCCACATGGAGTATTGAATTGAGGCTTCCTCAAGTTTGGCCCAAACTGACGCCTGAGTGGACGAAATGGGTGCCAAGGATGGAGCATTTCTTTGGCCAAGAGTGGAAAAAATATGGAATATATGATAGCATAAAGATGACTGAGCAGGAGATTCAAATGGACCGGCCTCTTCTTGCAGCTAGTTTATGCTTCTGGTCGTCTGCCACCAACACCATCAACCTGCCTCTTGGCCCAATGACCCCTACCTTGTTAGACATGGCGGCAATATTTGGGTTTCGGCCAAATGGTGTAGCGGTTTGTGCCACTGCCAAATTTCCGACTTCCTTCCATGCTAGCTTGAAGCCCAAAACGGTCACAAATGACAAGAAGGCTAAAGATGAGGCCGAAGCTAAGGCAAAACAATTACTCAACTATAGCACCTTCTATGCCACACATGCAGTTGATGAAGAGGTGACAGAAAATAGGAGACGACCCCCCAAGCAATATGAGCACGCAGCTTTCCTTCTCTACTGGCTTTGTAAGTTTGTATTTTGTGCCAAATCCAATAAGTGCACTTTAGAGTTTACTGGTATTGCAGAAGCACTAAGTGCGGGTATGCCCCTAGCTCTTGGACCATTTGTTCTAGCTCGCCTCTACCGTACTCTGCGCAATGTGGTGGTTGATAATATGAATTTAGACATCGGAGGACCATTATGGATGTTCCAAGTGTGGGTACAAACCTATTTTCATCAGCTTCGGCCACCATGCCCTCCATTTGTCCCTACCATGACGCTTGGCCGTCAGATTATACCCCTCGGCATTCATTCACATTCGGCCGCGGAGTGCTTTGGTTTCTTCTTTTCAAAGAAAGGCATGTCCAGGGATGAGTTTGCCATATGTTACAGCCGAGATCACCCTTCTTGTCTTGCGATTGACATATCAACATTATGGGAGAAGAAATTAGACTTGGATGTGATTCTATCTTGGGGAAGTATTCTGATTTCTCGGGACTTGAACTATGGCCTCAAAGGTACAGTGGGTCGGTATGGTGTTGAGGTTTATCTTCCCAATTTCGTTGCACGTCAGCTTGGCTTCATACAGAGTTGTCCGGCCTTATTTCTGATGTCAAGAAACCACTTCTCGTCATGGAGAGATGGGTTCACACGAACTTCTCAGTGTTCGGCCGTTGGTAAGTACTATGAGGAGCAATTTGGCAAGTTTGAAAGGTCCGGCCTAAAGCCTCGTTGTCCTGATCATAGAGCCACCCCACACTTCCAAACATGGTGGTCAACTTTTATCATGAAAAATCTTGGAAAGGACTTGGCTGGGACCCAACGCGCTGCATTACAAGGACTTCTAAACTTGCTAGGCCCCAATGAAGGTAATGGTAAGAAGAAAATACCGGATGGCAAGTCAAAATCAACCAAAGGATCCTCTAAACAAGGACAAACATCGAAGAAACGTGGCTCAACATTGGGGTATACTCAGAATGCCAAGAAAACAAAGAAATCATCGGATGTGGTGGAGAATTCAATCACAAACCCGACAGACACTATGGTTAGTGAAGACATATTTTTTGAGGCTAATATGGATGATGGCCACGATGCTTTGGCTGAAAACCAAAATACGTCTGAAATTGAGGATATGGCCGAAACTGGTGACGCCTCGATCCATAACGCGGACTCGGCTGATAGCGAAGGTTATTCGGAAGAAGCTCAATCAGAAAGCGGTGATCAAGAGAGAGATGGCCGCATTGATCATTCTTTGCCCCCACTTGAAAACTCCATGATTGAGATTGACATGGACGTAAGCCTTCCCTACTCCTTTCTTGGATTTCATTTCTTGCTTGTCTGA

Protein Analysis

702

Amino Acids

78.39

Weight (kDa)

6.34

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 131 - 339 2.3e-38 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 923
Acc36I ACCTGC 1 cut(s) 504
AccB1I GGYRCC 1 cut(s) 346
AccI GTMKAC 2 cut(s) 175, 1736
AccII CGCG 3 cut(s) 1094, 1593, 1934
AclWI GGATC 3 cut(s) 1680, 1693, 1918
AcsI RAATTY 4 cut(s) 232, 587, 946, 1783
AcuI CTGAAG 1 cut(s) 104
AcyI GRCGYC 2 cut(s) 326, 1917
AdeI CACNNNGTG 1 cut(s) 863
AfaI GTAC 4 cut(s) 916, 990, 1288, 1451
AfiI CCNNNNNNNGG 4 cut(s) 191, 985, 1634, 1933
AgsI TTSAA 8 cut(s) 293, 431, 616, 1119, 1270, 1478, 1788, 2033
AjiI CACGTC 1 cut(s) 1337
AjnI CCWGG 1 cut(s) 1133
AjuI GAANNNNNNNTTGG 2 cut(s) 1205, 1237
AloI GAACNNNNNNTCC 2 cut(s) 879, 911
Alw21I GWGCWC 2 cut(s) 768, 830
Alw26I GTCTC 1 cut(s) 736
Alw44I GTGCAC 1 cut(s) 826
AlwI GGATC 3 cut(s) 1680, 1693, 1918
Ama87I CYCGRG 1 cut(s) 1260
ApaLI GTGCAC 1 cut(s) 826
ApeKI GCWGC 3 cut(s) 452, 770, 1595
ApoI RAATTY 4 cut(s) 232, 587, 946, 1783
ArsI GACNNNNNNTTYG 2 cut(s) 1814, 1846
AspLEI GCGC 2 cut(s) 924, 1595
AsuC2I CCSGG 1 cut(s) 31
AsuHPI GGTGA 4 cut(s) 739, 1160, 1925, 1997
AsuNHI GCTAGC 1 cut(s) 608
AvaI CYCGRG 1 cut(s) 1260
AvaII GGWCC 6 cut(s) 276, 436, 887, 962, 1482, 1584
BaeGI GKGCMC 1 cut(s) 830
BalI TGGCCA 2 cut(s) 372, 1854
BamHI GGATCC 1 cut(s) 1685
BanI GGYRCC 1 cut(s) 346
BanII GRGCYC 1 cut(s) 128
BbsI GAAGAC 1 cut(s) 1827
Bbv12I GWGCWC 2 cut(s) 768, 830
BbvI GCAGC 3 cut(s) 464, 782, 1582
BccI CCATC 7 cut(s) 214, 349, 497, 1403, 1655, 1844, 1994
BceAI ACGGC 2 cut(s) 1038, 1424
BcgI CGANNNNNNTGC 2 cut(s) 328, 362
BciT130I CCWGG 1 cut(s) 1135
BclI TGATCA 3 cut(s) 1507, 1987, 2011
BcnI CCSGG 1 cut(s) 31
BcoDI GTCTC 1 cut(s) 736
BfaI CTAG 8 cut(s) 179, 227, 270, 456, 609, 878, 899, 1622
BfmI CTRYAG 1 cut(s) 688
BfuAI ACCTGC 1 cut(s) 504
BisI GCNGC 8 cut(s) 161, 185, 453, 537, 771, 1092, 1596, 2005
BlsI GCNGC 8 cut(s) 162, 186, 454, 538, 772, 1093, 1597, 2006
BmcAI AGTACT 1 cut(s) 1451
Bme1390I CCNGG 2 cut(s) 31, 1135
Bme18I GGWCC 6 cut(s) 276, 436, 887, 962, 1482, 1584
BmeT110I CYCGRG 1 cut(s) 1260
BmgBI CACGTC 1 cut(s) 1337
BmiI GGNNCC 5 cut(s) 348, 1585, 1586, 1627, 1687
BmrFI CCNGG 2 cut(s) 31, 1135
BmsI GCATC 3 cut(s) 37, 103, 1849
BmtI GCTAGC 1 cut(s) 612
BpiI GAAGAC 1 cut(s) 1827
BplI GAGNNNNNCTC 2 cut(s) 289, 321
Bpu10I CCTNAGC 1 cut(s) 666
BpuEI CTTGAG 1 cut(s) 291
BpuMI CCSGG 1 cut(s) 31
BsaHI GRCGYC 2 cut(s) 326, 1917
BsaJI CCNNGG 5 cut(s) 129, 350, 1069, 1092, 1134
BsaWI WCCGGW 1 cut(s) 1657
Bsc4I CCNNNNNNNGG 4 cut(s) 191, 985, 1634, 1933
Bse118I RCCGGY 1 cut(s) 438
Bse1I ACTGG 3 cut(s) 791, 847, 1915
Bse3DI GCAATG 1 cut(s) 931
BseBI CCWGG 1 cut(s) 1135
BseDI CCNNGG 5 cut(s) 129, 350, 1069, 1092, 1134
BseGI GGATG 7 cut(s) 360, 978, 1144, 1231, 1666, 1777, 1852
BseLI CCNNNNNNNGG 4 cut(s) 191, 985, 1634, 1933
BseMI GCAATG 1 cut(s) 931
BseMII CTCAG 4 cut(s) 321, 408, 1442, 1754
BseNI ACTGG 3 cut(s) 791, 847, 1915
BseRI GAGGAG 1 cut(s) 1472
BseSI GKGCMC 1 cut(s) 830
BseX3I CGGCCG 3 cut(s) 66, 1089, 1437
BseXI GCAGC 3 cut(s) 464, 782, 1582
BseYI CCCAGC 1 cut(s) 1580
Bsh1236I CGCG 3 cut(s) 1094, 1593, 1934
Bsh1285I CGRYCG 3 cut(s) 69, 1092, 1440
BshNI GGYRCC 1 cut(s) 346
BsiEI CGRYCG 3 cut(s) 69, 1092, 1440
BsiHKAI GWGCWC 2 cut(s) 768, 830
BsiHKCI CYCGRG 1 cut(s) 1260
BsiSI CCGG 5 cut(s) 30, 439, 1364, 1485, 1658
BslFI GGGAC 3 cut(s) 1019, 1277, 1597
BslI CCNNNNNNNGG 4 cut(s) 191, 985, 1634, 1933
BsmAI GTCTC 1 cut(s) 736
BsmBI CGTCTC 1 cut(s) 736
BsmFI GGGAC 3 cut(s) 1019, 1277, 1597
BsmI GAATGC 2 cut(s) 1074, 1750
BsoBI CYCGRG 1 cut(s) 1260
Bsp1286I GDGCHC 3 cut(s) 128, 768, 830
Bsp143I GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
BspCNI CTCAG 4 cut(s) 322, 409, 1441, 1753
BspFNI CGCG 3 cut(s) 1094, 1593, 1934
BspHI TCATGA 1 cut(s) 1554
BspLI GGNNCC 5 cut(s) 348, 1585, 1586, 1627, 1687
BspMI ACCTGC 1 cut(s) 504
BspOI GCTAGC 1 cut(s) 612
BspPI GGATC 3 cut(s) 1680, 1693, 1918
BspT107I GGYRCC 1 cut(s) 346
BsrDI GCAATG 1 cut(s) 931
BsrFI RCCGGY 1 cut(s) 438
BsrI ACTGG 3 cut(s) 791, 847, 1915
BssAI RCCGGY 1 cut(s) 438
BssECI CCNNGG 5 cut(s) 129, 350, 1069, 1092, 1134
BssMI GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
BssNAI GTATAC 2 cut(s) 176, 1737
BssNI GRCGYC 2 cut(s) 326, 1917
BssT1I CCWWGG 1 cut(s) 350
Bst1107I GTATAC 2 cut(s) 176, 1737
Bst2UI CCWGG 1 cut(s) 1135
Bst4CI ACNGT 4 cut(s) 194, 628, 914, 1291
Bst6I CTCTTC 2 cut(s) 450, 717
BstACI GRCGYC 2 cut(s) 326, 1917
BstAPI GCANNNNNTGC 1 cut(s) 863
BstC8I GCNNGC 5 cut(s) 199, 203, 610, 768, 904
BstDEI CTNAG 6 cut(s) 330, 417, 666, 860, 1428, 1740
BstDSI CCRYGG 2 cut(s) 129, 1092
BstF5I GGATG 7 cut(s) 360, 978, 1144, 1231, 1666, 1777, 1852
BstFNI CGCG 3 cut(s) 1094, 1593, 1934
BstHHI GCGC 2 cut(s) 924, 1595
BstKTI GATC 7 cut(s) 65, 1168, 1510, 1688, 1926, 1990, 2014
BstMAI GTCTC 1 cut(s) 736
BstMBI GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
BstMCI CGRYCG 3 cut(s) 69, 1092, 1440
BstMWI GCNNNNNNNGC 7 cut(s) 11, 74, 575, 710, 763, 863, 1940
BstNI CCWGG 1 cut(s) 1135
BstNSI RCATGY 3 cut(s) 205, 713, 1132
BstSCI CCNGG 2 cut(s) 29, 1133
BstSFI CTRYAG 1 cut(s) 688
BstSLI GKGCMC 1 cut(s) 830
BstUI CGCG 3 cut(s) 1094, 1593, 1934
BstV1I GCAGC 3 cut(s) 464, 782, 1582
BstV2I GAAGAC 1 cut(s) 1827
BstX2I RGATCY 1 cut(s) 1685
BstYI RGATCY 1 cut(s) 1685
BstZ17I GTATAC 2 cut(s) 176, 1737
BstZI CGGCCG 3 cut(s) 66, 1089, 1437
BtgI CCRYGG 2 cut(s) 129, 1092
BtrI CACGTC 1 cut(s) 1337
BtsCI GGATG 7 cut(s) 360, 978, 1144, 1231, 1666, 1777, 1852
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 3 cut(s) 579, 1296, 1436
BveI ACCTGC 1 cut(s) 504
Cac8I GCNNGC 5 cut(s) 199, 203, 610, 768, 904
CciI TCATGA 1 cut(s) 1554
CfoI GCGC 2 cut(s) 924, 1595
Cfr10I RCCGGY 1 cut(s) 438
Cfr42I CCGCGG 1 cut(s) 1095
CseI GACGC 3 cut(s) 334, 1054, 1925
Csp6I GTAC 4 cut(s) 915, 989, 1287, 1450
CspCI CAANNNNNGTGG 2 cut(s) 1520, 1555
CviQI GTAC 4 cut(s) 915, 989, 1287, 1450
DdeI CTNAG 6 cut(s) 330, 417, 666, 860, 1428, 1740
DpnI GATC 7 cut(s) 64, 1167, 1509, 1687, 1925, 1989, 2013
DpnII GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
DraIII CACNNNGTG 1 cut(s) 863
EagI CGGCCG 3 cut(s) 66, 1089, 1437
Eam1104I CTCTTC 2 cut(s) 450, 717
EarI CTCTTC 2 cut(s) 450, 717
EclXI CGGCCG 3 cut(s) 66, 1089, 1437
Eco130I CCWWGG 1 cut(s) 350
Eco24I GRGCYC 1 cut(s) 128
Eco47I GGWCC 6 cut(s) 276, 436, 887, 962, 1482, 1584
Eco52I CGGCCG 3 cut(s) 66, 1089, 1437
Eco57I CTGAAG 1 cut(s) 104
Eco88I CYCGRG 1 cut(s) 1260
EcoO109I RGGNCCY 2 cut(s) 1584, 1625
EcoRI GAATTC 1 cut(s) 1783
EcoRII CCWGG 1 cut(s) 1133
EcoT14I CCWWGG 1 cut(s) 350
EcoT38I GRGCYC 1 cut(s) 128
ErhI CCWWGG 1 cut(s) 350
Esp3I CGTCTC 1 cut(s) 736
FalI AAGNNNNNCTT 2 cut(s) 102, 134
FaqI GGGAC 3 cut(s) 1019, 1277, 1597
FauI CCCGC 2 cut(s) 190, 859
FauNDI CATATG 1 cut(s) 1151
FbaI TGATCA 3 cut(s) 1507, 1987, 2011
FblI GTMKAC 2 cut(s) 175, 1736
Fnu4HI GCNGC 8 cut(s) 161, 185, 453, 537, 771, 1092, 1596, 2005
FokI GGATG 7 cut(s) 367, 985, 1151, 1238, 1673, 1784, 1859
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 8 cut(s) 161, 185, 453, 537, 771, 1092, 1596, 2005
FspBI CTAG 8 cut(s) 179, 227, 270, 456, 609, 878, 899, 1622
FspI TGCGCA 1 cut(s) 923
GlaI GCGC 2 cut(s) 923, 1594
GluI GCNGC 8 cut(s) 161, 185, 453, 537, 771, 1092, 1596, 2005
GsaI CCCAGC 1 cut(s) 1584
HapII CCGG 5 cut(s) 30, 439, 1364, 1485, 1658
HgaI GACGC 3 cut(s) 334, 1054, 1925
HhaI GCGC 2 cut(s) 924, 1595
Hin1I GRCGYC 2 cut(s) 326, 1917
Hin6I GCGC 2 cut(s) 922, 1593
HinP1I GCGC 2 cut(s) 922, 1593
HincII GTYRAC 2 cut(s) 144, 1545
HindII GTYRAC 2 cut(s) 144, 1545
HinfI GANTC 4 cut(s) 245, 427, 1231, 1937
HpaII CCGG 5 cut(s) 30, 439, 1364, 1485, 1658
HphI GGTGA 4 cut(s) 739, 1160, 1925, 1997
Hpy166II GTNNAC 9 cut(s) 144, 176, 279, 336, 828, 840, 1416, 1545, 1737
Hpy188III TCNNGA 6 cut(s) 227, 1262, 1383, 1505, 1555, 1991
Hpy8I GTNNAC 9 cut(s) 144, 176, 279, 336, 828, 840, 1416, 1545, 1737
HpyAV CCTTC 9 cut(s) 85, 610, 637, 706, 788, 1182, 1628, 1946, 2078
HpyCH4III ACNGT 4 cut(s) 194, 628, 914, 1291
HpyCH4IV ACGT 4 cut(s) 1336, 1717, 1883, 2061
HpyCH4V TGCA 9 cut(s) 50, 116, 258, 452, 713, 828, 851, 1334, 1598
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 74, 575, 710, 763, 863, 1940
HpyF3I CTNAG 6 cut(s) 330, 417, 666, 860, 1428, 1740
HpySE526I ACGT 4 cut(s) 1336, 1717, 1883, 2061
Hsp92I GRCGYC 2 cut(s) 326, 1917
HspAI GCGC 2 cut(s) 922, 1593
KflI GGGWCCC 1 cut(s) 1584
Ksp22I TGATCA 3 cut(s) 1507, 1987, 2011
KspI CCGCGG 1 cut(s) 1095
Kzo9I GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
LmnI GCTCC 3 cut(s) 266, 358, 1459
Lsp1109I GCAGC 3 cut(s) 464, 782, 1582
LweI GCATC 3 cut(s) 37, 103, 1849
MaeI CTAG 8 cut(s) 179, 227, 270, 456, 609, 878, 899, 1622
MaeII ACGT 4 cut(s) 1336, 1717, 1883, 2061
MaeIII GTNAC 4 cut(s) 628, 727, 1154, 1913
MalI GATC 7 cut(s) 64, 1167, 1509, 1687, 1925, 1989, 2013
MboI GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
MboII GAAGA 9 cut(s) 437, 734, 1102, 1222, 1310, 1660, 1723, 1832, 1976
MflI RGATCY 1 cut(s) 1685
MhlI GDGCHC 3 cut(s) 128, 768, 830
MlsI TGGCCA 2 cut(s) 372, 1854
MluNI TGGCCA 2 cut(s) 372, 1854
MlyI GAGTC 1 cut(s) 1931
MmeI TCCRAC 2 cut(s) 15, 617
Mox20I TGGCCA 2 cut(s) 372, 1854
MscI TGGCCA 2 cut(s) 372, 1854
MslI CAYNNNNRTG 2 cut(s) 192, 410
Msp20I TGGCCA 2 cut(s) 372, 1854
MspA1I CMGCKG 1 cut(s) 1094
MspI CCGG 5 cut(s) 30, 439, 1364, 1485, 1658
MspR9I CCNGG 2 cut(s) 31, 1135
Mva1269I GAATGC 2 cut(s) 1074, 1750
MvaI CCWGG 1 cut(s) 1135
MvnI CGCG 3 cut(s) 1094, 1593, 1934
MwoI GCNNNNNNNGC 7 cut(s) 11, 74, 575, 710, 763, 863, 1940
NciI CCSGG 1 cut(s) 31
NdeI CATATG 1 cut(s) 1151
NdeII GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
NheI GCTAGC 1 cut(s) 608
NlaIV GGNNCC 5 cut(s) 348, 1585, 1586, 1627, 1687
NmeAIII GCCGAG 4 cut(s) 94, 1050, 1187, 1919
NmuCI GTSAC 3 cut(s) 628, 727, 1913
NsbI TGCGCA 1 cut(s) 923
NspI RCATGY 3 cut(s) 205, 713, 1132
PaeI GCATGC 1 cut(s) 205
PagI TCATGA 1 cut(s) 1554
PcsI WCGNNNNNNNCGW 1 cut(s) 910
PctI GAATGC 2 cut(s) 1074, 1750
PfeI GAWTC 3 cut(s) 245, 427, 1231
PkrI GCNGC 8 cut(s) 162, 186, 454, 538, 772, 1093, 1597, 2006
PleI GAGTC 1 cut(s) 1931
PpsI GAGTC 1 cut(s) 1931
PpuMI RGGWCCY 1 cut(s) 1584
Psp5II RGGWCCY 1 cut(s) 1584
Psp6I CCWGG 1 cut(s) 1133
PspFI CCCAGC 1 cut(s) 1580
PspGI CCWGG 1 cut(s) 1133
PspN4I GGNNCC 5 cut(s) 348, 1585, 1586, 1627, 1687
PspPPI RGGWCCY 1 cut(s) 1584
PsuI RGATCY 1 cut(s) 1685
RsaI GTAC 4 cut(s) 916, 990, 1288, 1451
RsaNI GTAC 4 cut(s) 915, 989, 1287, 1450
RseI CAYNNNNRTG 2 cut(s) 192, 410
SacII CCGCGG 1 cut(s) 1095
SatI GCNGC 8 cut(s) 161, 185, 453, 537, 771, 1092, 1596, 2005
Sau3AI GATC 7 cut(s) 62, 1165, 1507, 1685, 1923, 1987, 2011
ScaI AGTACT 1 cut(s) 1451
SchI GAGTC 1 cut(s) 1931
ScrFI CCNGG 2 cut(s) 31, 1135
SduI GDGCHC 3 cut(s) 128, 768, 830
SfaNI GCATC 3 cut(s) 37, 103, 1849
SfcI CTRYAG 1 cut(s) 688
Sfr303I CCGCGG 1 cut(s) 1095
SgrBI CCGCGG 1 cut(s) 1095
SinI GGWCC 6 cut(s) 276, 436, 887, 962, 1482, 1584
SmiMI CAYNNNNRTG 2 cut(s) 192, 410
SmlI CTYRAG 1 cut(s) 306
SmoI CTYRAG 1 cut(s) 306
SphI GCATGC 1 cut(s) 205
SspI AATATT 1 cut(s) 543
SspMI CTAG 8 cut(s) 179, 227, 270, 456, 609, 878, 899, 1622
StyD4I CCNGG 2 cut(s) 29, 1133
StyI CCWWGG 1 cut(s) 350
TaaI ACNGT 4 cut(s) 194, 628, 914, 1291
TaiI ACGT 4 cut(s) 1339, 1720, 1886, 2064
TaqI TCGA 3 cut(s) 99, 1709, 1922
TatI WGTACW 1 cut(s) 1449
TauI GCSGC 5 cut(s) 163, 187, 539, 1094, 2007
TfiI GAWTC 3 cut(s) 245, 427, 1231
TscAI CASTG 3 cut(s) 586, 1296, 1436
TseFI GTSAC 3 cut(s) 628, 727, 1913
TseI GCWGC 3 cut(s) 452, 770, 1595
Tsp45I GTSAC 3 cut(s) 628, 727, 1913
TspRI CASTG 3 cut(s) 586, 1296, 1436
VneI GTGCAC 1 cut(s) 826
VpaK11BI GGWCC 6 cut(s) 276, 436, 887, 962, 1482, 1584
XapI RAATTY 4 cut(s) 232, 587, 946, 1783
XbaI TCTAGA 1 cut(s) 226
XceI RCATGY 3 cut(s) 205, 713, 1132
XmiI GTMKAC 2 cut(s) 175, 1736
XspI CTAG 8 cut(s) 179, 227, 270, 456, 609, 878, 899, 1622
ZrmI AGTACT 1 cut(s) 1451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.