Rmu_sc0002535.1_g000002

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002535.1
OG0000063
Physical Location & Seq
Reverse (-)
1136 .. 3266
2131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002535.1_g000002.1.cds

Sequence Viewer

Length: 1713 bp
atggatgctacaaatgaatcgaagaggcaccgcaactatagcactttgtataacacatatggtgtggtcgactcaaaagattcttcagaaagacagccggtcaaaaagtatgaacacacggctttcttgttctattggttatgcaagtacgtattttgttgtaagtcaggacagtgccctcgtgactatgcagcaatagccgaggccctagcttctggtaccaaactagccctcggcccatttgttcttgcgcatctttatagaagtttacaccgtattgtgactgaccgcatgaatcctaatgttggtggtccactttggatgttccaactgtggctacgagcttattttcctcaattatctgttgctcggcccgaatacaaccatgatgttatgtacggccaatacctcatggctacatcttcatcccacatgtcttttgcagattgctttaagatgttctacacacttagaagtttagagtgcttttccgtctgctattctcaatggcatccagcctccactgcactcggtttcaatgaaccatcagaagttcttagtgaagttcaattaagagaaacttgggccagctttctaatttcacgggatctgcattatgggcttgcaacctccagcaaatacaaaccaggtgttgagatttacctccccaactacttcgctcgtcagtttggatttatgcaaagttgccctgtcccatatcaacattctgaaaaccttttgagttcatggcgccggaagttcagatcaaagaacttgtgcatcccggtttcaaaatgcttccgtcaacacttcaaccgttttaagatgagaatatttcaaccaagcagtagaccaactcctcctttttctatctggtggtccagttactcttcaatttgtcaatgcagatctgatggacctattcacaacacggatattaaaagtgacagcaaccacacagtagaattattcctcgacgataatgaagctgccaataagacttgggtggaaagtgaagacaccatgtcaattgaagattctactcaatccgtacccaaggatgatgtggtcattccaccaactcatcttctatcagcagataccttagctttgctagacaagctcaccgatcaacaaactagccatgaacaagatatggtcaacaatgaccaaatagcagtcgcggccaagtttgtagaggatctttgtcatactgaacttgtaggtgtggtcggtgataacctttacagccgtttcaaggaggagctaaacgttttgatcttggcacaccattttagtcatgaaaaaacacaaaaaattgaagaacaccttgagattatggacgctagcattcctgtttacatcactgctctcaaaaagtgggacaccggccgtagacttgaaagaaattatggagatattgttgcacgacaaagttctcgagccgcacagctaatagagttgcgccgtagttatgacaaagatgttcaagaattagccgagttggagaagcatgtgattgcagttcgcgaccgtatgactcagacgacagctactatccagcaacaatctagcgaacatcaccgtgagcttgaaattttctcaaggcacggcaaagctactcaagaattcttggctaagaaagaagaaattgacagcgtgctgaccacgactagtattgactgggacgcattgaggaagattctcctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

570

Amino Acids

65.89

Weight (kDa)

6.45

Isoelectric Point (pI)

52.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 252
Acc65I GGTACC 1 cut(s) 218
AccB1I GGYRCC 3 cut(s) 27, 218, 750
AccI GTMKAC 3 cut(s) 69, 850, 1396
AccII CGCG 2 cut(s) 1184, 1530
AciI CCGC 4 cut(s) 31, 289, 1184, 1446
AclI AACGTT 1 cut(s) 1272
AclWI GGATC 2 cut(s) 615, 1209
AcoI YGGCCR 3 cut(s) 400, 1185, 1390
AcsI RAATTY 2 cut(s) 1596, 1628
AcuI CTGAAG 1 cut(s) 69
AcyI GRCGYC 1 cut(s) 751
AfaI GTAC 4 cut(s) 149, 220, 398, 1053
AfiI CCNNNNNNNGG 2 cut(s) 305, 1258
AflIII ACRYGT 1 cut(s) 432
AhdI GACNNNNNGTC 2 cut(s) 98, 1024
AhlI ACTAGT 1 cut(s) 1673
AjnI CCWGG 1 cut(s) 646
AlwI GGATC 2 cut(s) 615, 1209
Ama87I CYCGRG 1 cut(s) 1440
AoxI GGCC 7 cut(s) 204, 235, 371, 400, 585, 1185, 1390
ApeKI GCWGC 2 cut(s) 191, 989
ApoI RAATTY 2 cut(s) 1596, 1628
Asp718I GGTACC 1 cut(s) 218
AspLEI GCGC 3 cut(s) 253, 753, 1467
AspS9I GGNCC 7 cut(s) 205, 236, 311, 372, 585, 879, 917
AsuC2I CCSGG 1 cut(s) 785
AsuHPI GGTGA 3 cut(s) 1117, 1247, 1574
AsuNHI GCTAGC 1 cut(s) 1346
AvaI CYCGRG 1 cut(s) 1440
AvaII GGWCC 3 cut(s) 311, 879, 917
BaeGI GKGCMC 1 cut(s) 179
BanI GGYRCC 3 cut(s) 27, 218, 750
BauI CACGAG 1 cut(s) 180
BbsI GAAGAC 1 cut(s) 1023
BbvI GCAGC 2 cut(s) 203, 976
BccI CCATC 2 cut(s) 553, 908
BceAI ACGGC 6 cut(s) 135, 415, 1236, 1377, 1452, 1627
BciT130I CCWGG 1 cut(s) 648
BcnI CCSGG 1 cut(s) 785
BcuI ACTAGT 1 cut(s) 1673
BfaI CTAG 7 cut(s) 209, 227, 1115, 1140, 1347, 1572, 1674
BfmI CTRYAG 1 cut(s) 37
BfoI RGCGCY 1 cut(s) 754
BglII AGATCT 1 cut(s) 908
BisI GCNGC 4 cut(s) 192, 990, 1185, 1446
BlsI GCNGC 4 cut(s) 193, 991, 1186, 1447
Bme1390I CCNGG 2 cut(s) 648, 785
Bme18I GGWCC 3 cut(s) 311, 879, 917
BmeRI GACNNNNNGTC 2 cut(s) 98, 1024
BmeT110I CYCGRG 1 cut(s) 1440
BmgT120I GGNCC 7 cut(s) 205, 236, 311, 372, 585, 879, 917
BmiI GGNNCC 3 cut(s) 29, 220, 752
BmrFI CCNGG 2 cut(s) 648, 785
BmrI ACTGGG 1 cut(s) 1693
BmsI GCATC 3 cut(s) 262, 520, 789
BmtI GCTAGC 1 cut(s) 1350
BmuI ACTGGG 1 cut(s) 1693
BpiI GAAGAC 1 cut(s) 1023
BpmI CTGGAG 1 cut(s) 616
Bpu10I CCTNAGC 1 cut(s) 1105
BpuEI CTTGAG 3 cut(s) 1352, 1588, 1608
BpuMI CCSGG 1 cut(s) 785
BsaAI YACGTR 1 cut(s) 151
BsaHI GRCGYC 1 cut(s) 751
BsaJI CCNNGG 3 cut(s) 201, 232, 1056
BsaXI ACNNNNNCTCC 2 cut(s) 1407, 1437
Bsc4I CCNNNNNNNGG 2 cut(s) 305, 1258
Bse118I RCCGGY 2 cut(s) 97, 1388
Bse1I ACTGG 2 cut(s) 882, 1688
BseBI CCWGG 1 cut(s) 648
BseDI CCNNGG 3 cut(s) 201, 232, 1056
BseGI GGATG 6 cut(s) 10, 327, 425, 511, 780, 1066
BseLI CCNNNNNNNGG 2 cut(s) 305, 1258
BseMII CTCAG 1 cut(s) 1556
BseNI ACTGG 2 cut(s) 882, 1688
BseRI GAGGAG 2 cut(s) 849, 1277
BseSI GKGCMC 1 cut(s) 179
BseX3I CGGCCG 1 cut(s) 1390
BseXI GCAGC 2 cut(s) 203, 976
BsgI GTGCAG 1 cut(s) 510
Bsh1236I CGCG 2 cut(s) 1184, 1530
Bsh1285I CGRYCG 2 cut(s) 1393, 1534
BshFI GGCC 7 cut(s) 206, 237, 373, 402, 587, 1187, 1392
BshNI GGYRCC 3 cut(s) 27, 218, 750
BsiEI CGRYCG 2 cut(s) 1393, 1534
BsiHKCI CYCGRG 1 cut(s) 1440
BsiSI CCGG 4 cut(s) 98, 754, 785, 1389
BslFI GGGAC 3 cut(s) 698, 1397, 1700
BslI CCNNNNNNNGG 2 cut(s) 305, 1258
BsmFI GGGAC 3 cut(s) 698, 1397, 1700
BsmI GAATGC 1 cut(s) 1350
BsnI GGCC 7 cut(s) 206, 237, 373, 402, 587, 1187, 1392
BsoBI CYCGRG 1 cut(s) 1440
Bsp1286I GDGCHC 1 cut(s) 179
Bsp143I GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
Bsp68I TCGCGA 1 cut(s) 1530
BspACI CCGC 4 cut(s) 31, 289, 1184, 1446
BspANI GGCC 7 cut(s) 206, 237, 373, 402, 587, 1187, 1392
BspCNI CTCAG 1 cut(s) 1555
BspFNI CGCG 2 cut(s) 1184, 1530
BspHI TCATGA 1 cut(s) 1300
BspLI GGNNCC 3 cut(s) 29, 220, 752
BspOI GCTAGC 1 cut(s) 1350
BspPI GGATC 2 cut(s) 615, 1209
BspT107I GGYRCC 3 cut(s) 27, 218, 750
BsrFI RCCGGY 2 cut(s) 97, 1388
BsrI ACTGG 2 cut(s) 882, 1688
BssAI RCCGGY 2 cut(s) 97, 1388
BssECI CCNNGG 3 cut(s) 201, 232, 1056
BssMI GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
BssNI GRCGYC 1 cut(s) 751
BssSI CACGAG 1 cut(s) 180
BssT1I CCWWGG 1 cut(s) 1056
Bst2BI CACGAG 1 cut(s) 180
Bst2UI CCWGG 1 cut(s) 648
Bst4CI ACNGT 7 cut(s) 174, 275, 333, 818, 961, 1535, 1586
Bst6I CTCTTC 2 cut(s) 17, 895
BstACI GRCGYC 1 cut(s) 751
BstBAI YACGTR 1 cut(s) 151
BstC8I GCNNGC 4 cut(s) 589, 624, 1348, 1661
BstDEI CTNAG 5 cut(s) 470, 557, 1105, 1542, 1638
BstF5I GGATG 6 cut(s) 10, 327, 425, 511, 780, 1066
BstFNI CGCG 2 cut(s) 1184, 1530
BstH2I RGCGCY 1 cut(s) 754
BstHHI GCGC 3 cut(s) 253, 753, 1467
BstKTI GATC 6 cut(s) 610, 767, 911, 1132, 1204, 1281
BstMBI GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
BstMCI CGRYCG 2 cut(s) 1393, 1534
BstMWI GCNNNNNNNGC 6 cut(s) 39, 197, 524, 619, 1120, 1184
BstNI CCWGG 1 cut(s) 648
BstNSI RCATGY 2 cut(s) 436, 1517
BstSCI CCNGG 2 cut(s) 646, 783
BstSFI CTRYAG 1 cut(s) 37
BstSLI GKGCMC 1 cut(s) 179
BstSNI TACGTA 1 cut(s) 151
BstUI CGCG 2 cut(s) 1184, 1530
BstV1I GCAGC 2 cut(s) 203, 976
BstV2I GAAGAC 1 cut(s) 1023
BstX2I RGATCY 3 cut(s) 607, 908, 1201
BstYI RGATCY 3 cut(s) 607, 908, 1201
BstZI CGGCCG 1 cut(s) 1390
BsuRI GGCC 7 cut(s) 206, 237, 373, 402, 587, 1187, 1392
BtsCI GGATG 6 cut(s) 10, 327, 425, 511, 780, 1066
BtsI GCAGTG 2 cut(s) 522, 1365
BtsIMutI CAGTG 3 cut(s) 179, 522, 1365
BtuMI TCGCGA 1 cut(s) 1530
Cac8I GCNNGC 4 cut(s) 589, 624, 1348, 1661
CciI TCATGA 1 cut(s) 1300
CfoI GCGC 3 cut(s) 253, 753, 1467
Cfr10I RCCGGY 2 cut(s) 97, 1388
Cfr13I GGNCC 7 cut(s) 205, 236, 311, 372, 585, 879, 917
CseI GACGC 2 cut(s) 1352, 1697
CsiI ACCWGGT 1 cut(s) 646
Csp6I GTAC 4 cut(s) 148, 219, 397, 1052
CviAII CATG 9 cut(s) 292, 386, 412, 433, 747, 1024, 1145, 1301, 1514
CviQI GTAC 4 cut(s) 148, 219, 397, 1052
DdeI CTNAG 5 cut(s) 470, 557, 1105, 1542, 1638
DinI GGCGCC 1 cut(s) 752
DpnI GATC 6 cut(s) 609, 766, 910, 1131, 1203, 1280
DpnII GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
DriI GACNNNNNGTC 2 cut(s) 98, 1024
EaeI YGGCCR 3 cut(s) 400, 1185, 1390
EagI CGGCCG 1 cut(s) 1390
Eam1104I CTCTTC 2 cut(s) 17, 895
Eam1105I GACNNNNNGTC 2 cut(s) 98, 1024
EarI CTCTTC 2 cut(s) 17, 895
EclXI CGGCCG 1 cut(s) 1390
Eco105I TACGTA 1 cut(s) 151
Eco130I CCWWGG 1 cut(s) 1056
Eco47I GGWCC 3 cut(s) 311, 879, 917
Eco52I CGGCCG 1 cut(s) 1390
Eco57I CTGAAG 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 1440
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 1628
EcoRII CCWGG 1 cut(s) 646
EcoT14I CCWWGG 1 cut(s) 1056
EgeI GGCGCC 1 cut(s) 752
EheI GGCGCC 1 cut(s) 752
ErhI CCWWGG 1 cut(s) 1056
FaeI CATG 9 cut(s) 295, 389, 415, 436, 750, 1027, 1148, 1304, 1517
FalI AAGNNNNNCTT 4 cut(s) 565, 597, 1314, 1346
FaqI GGGAC 3 cut(s) 698, 1397, 1700
FatI CATG 9 cut(s) 291, 385, 411, 432, 746, 1023, 1144, 1300, 1513
FauNDI CATATG 1 cut(s) 58
FblI GTMKAC 3 cut(s) 69, 850, 1396
Fnu4HI GCNGC 4 cut(s) 192, 990, 1185, 1446
FokI GGATG 6 cut(s) 17, 334, 412, 498, 767, 1073
Fsp4HI GCNGC 4 cut(s) 192, 990, 1185, 1446
FspBI CTAG 7 cut(s) 209, 227, 1115, 1140, 1347, 1572, 1674
FspI TGCGCA 1 cut(s) 252
GlaI GCGC 3 cut(s) 252, 752, 1466
GluI GCNGC 4 cut(s) 192, 990, 1185, 1446
GsuI CTGGAG 1 cut(s) 616
HaeII RGCGCY 1 cut(s) 754
HaeIII GGCC 7 cut(s) 206, 237, 373, 402, 587, 1187, 1392
HapII CCGG 4 cut(s) 98, 754, 785, 1389
HgaI GACGC 2 cut(s) 1352, 1697
HhaI GCGC 3 cut(s) 253, 753, 1467
Hin1I GRCGYC 1 cut(s) 751
Hin1II CATG 9 cut(s) 295, 389, 415, 436, 750, 1027, 1148, 1304, 1517
Hin6I GCGC 3 cut(s) 251, 751, 1465
HinP1I GCGC 3 cut(s) 251, 751, 1465
HincII GTYRAC 3 cut(s) 70, 806, 1162
HindII GTYRAC 3 cut(s) 70, 806, 1162
HinfI GANTC 7 cut(s) 17, 71, 80, 295, 1037, 1540, 1702
HpaII CCGG 4 cut(s) 98, 754, 785, 1389
HphI GGTGA 3 cut(s) 1117, 1247, 1574
Hpy166II GTNNAC 8 cut(s) 70, 269, 314, 806, 851, 1162, 1360, 1397
Hpy188I TCNGA 6 cut(s) 88, 550, 730, 764, 913, 1545
Hpy188III TCNNGA 7 cut(s) 168, 182, 1301, 1440, 1490, 1529, 1625
Hpy8I GTNNAC 8 cut(s) 70, 269, 314, 806, 851, 1162, 1360, 1397
Hpy99I CGWCG 1 cut(s) 980
HpyCH4III ACNGT 7 cut(s) 174, 275, 333, 818, 961, 1535, 1586
HpyCH4IV ACGT 2 cut(s) 150, 1272
HpyF10VI GCNNNNNNNGC 6 cut(s) 39, 197, 524, 619, 1120, 1184
HpyF3I CTNAG 5 cut(s) 470, 557, 1105, 1542, 1638
HpySE526I ACGT 2 cut(s) 150, 1272
Hsp92I GRCGYC 1 cut(s) 751
Hsp92II CATG 9 cut(s) 295, 389, 415, 436, 750, 1027, 1148, 1304, 1517
HspAI GCGC 3 cut(s) 251, 751, 1465
KasI GGCGCC 1 cut(s) 750
KpnI GGTACC 1 cut(s) 222
Kzo9I GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
LmnI GCTCC 1 cut(s) 1264
Lsp1109I GCAGC 2 cut(s) 203, 976
LweI GCATC 3 cut(s) 262, 520, 789
MabI ACCWGGT 1 cut(s) 646
MaeI CTAG 7 cut(s) 209, 227, 1115, 1140, 1347, 1572, 1674
MaeII ACGT 2 cut(s) 150, 1272
MaeIII GTNAC 4 cut(s) 182, 280, 884, 944
MalI GATC 6 cut(s) 609, 766, 910, 1131, 1203, 1280
MboI GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
MfeI CAATTG 1 cut(s) 1029
MflI RGATCY 3 cut(s) 607, 908, 1201
MhlI GDGCHC 1 cut(s) 179
Mly113I GGCGCC 1 cut(s) 751
MlyI GAGTC 2 cut(s) 65, 1534
MmeI TCCRAC 2 cut(s) 352, 1485
MseI TTAA 4 cut(s) 453, 572, 822, 939
MslI CAYNNNNRTG 1 cut(s) 1584
MspI CCGG 4 cut(s) 98, 754, 785, 1389
MspR9I CCNGG 2 cut(s) 648, 785
MunI CAATTG 1 cut(s) 1029
Mva1269I GAATGC 1 cut(s) 1350
MvaI CCWGG 1 cut(s) 648
MvnI CGCG 2 cut(s) 1184, 1530
MwoI GCNNNNNNNGC 6 cut(s) 39, 197, 524, 619, 1120, 1184
NarI GGCGCC 1 cut(s) 751
NciI CCSGG 1 cut(s) 785
NdeI CATATG 1 cut(s) 58
NdeII GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
NheI GCTAGC 1 cut(s) 1346
NlaIII CATG 9 cut(s) 295, 389, 415, 436, 750, 1027, 1148, 1304, 1517
NlaIV GGNNCC 3 cut(s) 29, 220, 752
NmeAIII GCCGAG 4 cut(s) 213, 226, 349, 1525
NmuCI GTSAC 3 cut(s) 182, 280, 944
NruI TCGCGA 1 cut(s) 1530
NsbI TGCGCA 1 cut(s) 252
NspI RCATGY 2 cut(s) 436, 1517
PaeR7I CTCGAG 1 cut(s) 1440
PagI TCATGA 1 cut(s) 1300
PciI ACATGT 1 cut(s) 432
PctI GAATGC 1 cut(s) 1350
PfeI GAWTC 5 cut(s) 17, 80, 295, 1037, 1702
PkrI GCNGC 4 cut(s) 193, 991, 1186, 1447
PleI GAGTC 2 cut(s) 65, 1534
PluTI GGCGCC 1 cut(s) 754
PpsI GAGTC 2 cut(s) 65, 1534
Ppu21I YACGTR 1 cut(s) 151
PscI ACATGT 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 1272
Psp6I CCWGG 1 cut(s) 646
PspGI CCWGG 1 cut(s) 646
PspN4I GGNNCC 3 cut(s) 29, 220, 752
PspPI GGNCC 7 cut(s) 205, 236, 311, 372, 585, 879, 917
PsuI RGATCY 3 cut(s) 607, 908, 1201
RruI TCGCGA 1 cut(s) 1530
RsaI GTAC 4 cut(s) 149, 220, 398, 1053
RsaNI GTAC 4 cut(s) 148, 219, 397, 1052
RseI CAYNNNNRTG 1 cut(s) 1584
SalI GTCGAC 1 cut(s) 68
SaqAI TTAA 4 cut(s) 453, 572, 822, 939
SatI GCNGC 4 cut(s) 192, 990, 1185, 1446
Sau3AI GATC 6 cut(s) 607, 764, 908, 1129, 1201, 1278
Sau96I GGNCC 7 cut(s) 205, 236, 311, 372, 585, 879, 917
SchI GAGTC 2 cut(s) 65, 1534
ScrFI CCNGG 2 cut(s) 648, 785
SduI GDGCHC 1 cut(s) 179
SexAI ACCWGGT 1 cut(s) 646
SfaNI GCATC 3 cut(s) 262, 520, 789
SfcI CTRYAG 1 cut(s) 37
SfoI GGCGCC 1 cut(s) 752
Sfr274I CTCGAG 1 cut(s) 1440
SinI GGWCC 3 cut(s) 311, 879, 917
SlaI CTCGAG 1 cut(s) 1440
SmiMI CAYNNNNRTG 1 cut(s) 1584
SmlI CTYRAG 4 cut(s) 1331, 1440, 1603, 1623
SmoI CTYRAG 4 cut(s) 1331, 1440, 1603, 1623
SnaBI TACGTA 1 cut(s) 151
SpeI ACTAGT 1 cut(s) 1673
SsiI CCGC 4 cut(s) 31, 289, 1184, 1446
SspDI GGCGCC 1 cut(s) 750
SspI AATATT 1 cut(s) 834
SspMI CTAG 7 cut(s) 209, 227, 1115, 1140, 1347, 1572, 1674
StyD4I CCNGG 2 cut(s) 646, 783
StyI CCWWGG 1 cut(s) 1056
TaaI ACNGT 7 cut(s) 174, 275, 333, 818, 961, 1535, 1586
TaiI ACGT 2 cut(s) 153, 1275
TaqI TCGA 4 cut(s) 20, 69, 975, 1441
TauI GCSGC 2 cut(s) 1187, 1448
TfiI GAWTC 5 cut(s) 17, 80, 295, 1037, 1702
Tru1I TTAA 4 cut(s) 453, 572, 822, 939
Tru9I TTAA 4 cut(s) 453, 572, 822, 939
TscAI CASTG 3 cut(s) 179, 529, 1372
TseFI GTSAC 3 cut(s) 182, 280, 944
TseI GCWGC 2 cut(s) 191, 989
Tsp45I GTSAC 3 cut(s) 182, 280, 944
TspDTI ATGAA 9 cut(s) 30, 126, 308, 414, 555, 735, 999, 1161, 1317
TspGWI ACGGA 4 cut(s) 481, 791, 947, 1039
TspRI CASTG 3 cut(s) 179, 529, 1372
VpaK11BI GGWCC 3 cut(s) 311, 879, 917
XapI RAATTY 2 cut(s) 1596, 1628
XceI RCATGY 2 cut(s) 436, 1517
XcmI CCANNNNNNNNNTGG 1 cut(s) 1063
XhoI CTCGAG 1 cut(s) 1440
XmiI GTMKAC 3 cut(s) 69, 850, 1396
XspI CTAG 7 cut(s) 209, 227, 1115, 1140, 1347, 1572, 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.