Rh2DG366600

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000063
Physical Location & Seq
Reverse (-)
51802687 .. 51809621
6935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG366600.1

Sequence Viewer

Length: 1680 bp
ATGACCAGGGAAGAGTTTGCCATATACTATAGCCGAGACTATCCTCCTTGTCTTGCATTTGATATAACTAAGCCATGGGAGAGTTCTTTAGACTTGTCAGTAATTCTACCTTGGGGAAGCATTCTGATTTCTAGAGACGTAAACTATGGTCTCAAGGGTACACTAGGTCGGCCAGGGGTTGAGGTTTACCTTCCAAACTTTGTTGCGTGTCAGCTTGGCTTCATACAAAGTTGTCCAGCTTTCTTTCGAATGTCCCGGAATCACTTTTCTTCATGGAGAGGTGGGTTTACAGACACTGCGCATTGTTCGGCCGTCACTCTTTATTATCAGACTCAGTTTGGCAAGTTGGAGAGATCCGGCCTGAGCGCCCGCGAACCTGATGATAGAGCAACCCCGACTTTCCAAGCTTGGTGGTCAACATTTATCAAGAAGAAACTTAGAGAGTACTTGCGGACAACCGAGCGTATTGCCTTGTATGGATTTCCGGGCTTGTTCGTCAAAAAAGGCAATGGAAATAAGAAAGCACCGGTTGCGAAGTCGAAATCCAAAGAAATGTCCAAGGAAGAGCAAACATCAAAGAAACGATGGTCAAAGTCGGGAAGAGCTTTGCCTACCAAGAAGGTAAAGAAGTCACCTGAAATGGTGGAGAGTTTGGTCACGAATCCGGCCAACATTATGGTTAGTGAAGACATAATCTTTGAGGATGATATGGATAATAGCCAAAATGCTCTAGCTGACAATCACATCATGTCTAGAGCTGAAGATGCAGCCGAAACTAGTGATGCCACTACTACAAAAGGGAAAAATTTCTTCTTTGGAATTGCAGGTGGGAAGCTGATAGAGCGAATTCGTGCCTTGACATTCCAAAAAGTGGTACACCAGCAAATTAGTTGGTTTGATGATCCTGCAAATTCAAGTGGTGCTATTGGTGCAAGGTTGTCTTCTGATGCTTCAACTGTGAAGGCTCTTGTTGGTGACGCATTAGCCTTGATTGCTCAGAACATAGCAACAATCATAGCAGGACTGATTATAGGTTTCGTAGCTAACTGGAGGCTAGCGCTTATAATTATAGCTGTGTCGCCATTGTTGATTGGGCAAGGAATACTCCAAACAAAATTTCTTAAAGGGTTTAGTGCCGATGCCAAGGTTATGTATGAAGAAGCAAGTCAAGTGGCAAATGATGCAATTGGTAGCATTCGAACTGTTGCATCATTTTGTTCTGAAAAGAAGGTGATGGATACGTATGAGAAGAAGTGTGAAGGTCCAATGAAACAAGGAGTACGATTGGGAGTAGTAAGTGGTACAGGTTTTGGCGCTTCATTTGTAGTAATGTTCTTCACAAATGCATTAATTTTCTATGTTGGAGCTCATCTTGTGAAAAATGGGCAAGCCACATTTGAACAAGTATTCAGGAGAGATGGCCGCATTGATCACTCTTTGCATCCTCCTGTGAGCTCCATGGTTGAAATTGACATGGATTTACGAGAATCTCAAAGTGGTTCAACCTTGGAGTTGGCTCTTCTCAACCCAACTGAACCAAATCCTTCTATGTCCAGAATGCTTACCTCCCCTGTTACTGAAGGGATGCCTCGAAATGATCAAGCTATCGTTTGTGCCCCATCGTCGGCTGCGCCTGTGGTGAGTGACTCAACAACTTTAGGTTTTGTTTGCCCTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

559

Amino Acids

61.32

Weight (kDa)

8.81

Isoelectric Point (pI)

42.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 267 - 470 4.8e-51 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1064
AarI CACCTGC 1 cut(s) 815
Acc16I TGCGCA 1 cut(s) 300
Acc36I ACCTGC 1 cut(s) 815
AccB7I CCANNNNNTGG 1 cut(s) 871
AccII CGCG 1 cut(s) 372
AciI CCGC 3 cut(s) 370, 451, 1423
AclWI GGATC 2 cut(s) 348, 896
AcoI YGGCCR 4 cut(s) 170, 309, 666, 1420
AcsI RAATTY 4 cut(s) 805, 846, 910, 1115
AcuI CTGAAG 2 cut(s) 780, 1599
AfaI GTAC 5 cut(s) 160, 446, 876, 1281, 1303
AfeI AGCGCT 1 cut(s) 1059
AfiI CCNNNNNNNGG 2 cut(s) 871, 1624
AgeI ACCGGT 1 cut(s) 526
AgsI TTSAA 5 cut(s) 915, 954, 1400, 1466, 1503
AhlI ACTAGT 1 cut(s) 776
AjnI CCWGG 2 cut(s) 5, 172
AjuI GAANNNNNNNTTGG 2 cut(s) 1101, 1133
Alw21I GWGCWC 2 cut(s) 1369, 1457
Alw26I GTCTC 3 cut(s) 30, 129, 155
AlwI GGATC 2 cut(s) 348, 896
AlwNI CAGNNNCTG 1 cut(s) 296
Aor51HI AGCGCT 1 cut(s) 1059
AoxI GGCC 5 cut(s) 170, 309, 358, 666, 1420
ApeKI GCWGC 2 cut(s) 767, 1628
ApoI RAATTY 4 cut(s) 805, 846, 910, 1115
ArsI GACNNNNNNTTYG 2 cut(s) 680, 712
AseI ATTAAT 1 cut(s) 1349
AsiGI ACCGGT 1 cut(s) 526
Asp700I GAANNNNTTC 1 cut(s) 806
AspLEI GCGC 5 cut(s) 301, 368, 1060, 1316, 1633
AspS9I GGNCC 1 cut(s) 1262
AsuC2I CCSGG 2 cut(s) 256, 486
AsuHPI GGTGA 4 cut(s) 624, 986, 1243, 1651
AsuII TTCGAA 2 cut(s) 247, 1198
AsuNHI GCTAGC 1 cut(s) 1054
AvaII GGWCC 1 cut(s) 1262
BaeGI GKGCMC 1 cut(s) 1618
BanII GRGCYC 2 cut(s) 1369, 1457
BbsI GAAGAC 2 cut(s) 693, 933
Bbv12I GWGCWC 2 cut(s) 1369, 1457
BbvI GCAGC 2 cut(s) 779, 1615
BccI CCATC 4 cut(s) 579, 1228, 1412, 1627
BceAI ACGGC 1 cut(s) 296
BcgI CGANNNNNNTGC 2 cut(s) 449, 483
BciT130I CCWGG 2 cut(s) 7, 174
BciVI GTATCC 1 cut(s) 1231
BclI TGATCA 2 cut(s) 1429, 1597
BcnI CCSGG 2 cut(s) 256, 486
BcoDI GTCTC 3 cut(s) 30, 129, 155
BcuI ACTAGT 1 cut(s) 776
BfaI CTAG 7 cut(s) 132, 164, 731, 753, 777, 1055, 1674
BfmI CTRYAG 1 cut(s) 28
BfoI RGCGCY 3 cut(s) 369, 1061, 1317
BfuAI ACCTGC 1 cut(s) 815
BfuI GTATCC 1 cut(s) 1231
BisI GCNGC 3 cut(s) 768, 1423, 1629
BlsI GCNGC 3 cut(s) 769, 1424, 1630
BmcAI AGTACT 1 cut(s) 446
Bme1390I CCNGG 4 cut(s) 7, 174, 256, 486
Bme18I GGWCC 1 cut(s) 1262
BmgT120I GGNCC 1 cut(s) 1262
BmrFI CCNGG 4 cut(s) 7, 174, 256, 486
BmsI GCATC 8 cut(s) 754, 772, 937, 1129, 1171, 1217, 1450, 1575
BmtI GCTAGC 1 cut(s) 1058
BpiI GAAGAC 2 cut(s) 693, 933
BpmI CTGGAG 1 cut(s) 1069
Bpu10I CCTNAGC 1 cut(s) 362
Bpu14I TTCGAA 2 cut(s) 247, 1198
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 2 cut(s) 256, 486
BsaAI YACGTR 1 cut(s) 1242
BsaI GGTCTC 1 cut(s) 155
BsaJI CCNNGG 8 cut(s) 6, 74, 110, 173, 558, 1143, 1458, 1506
BsaWI WCCGGW 1 cut(s) 526
Bsc4I CCNNNNNNNGG 2 cut(s) 871, 1624
Bse118I RCCGGY 1 cut(s) 526
Bse1I ACTGG 1 cut(s) 1052
Bse3DI GCAATG 1 cut(s) 514
BseBI CCWGG 2 cut(s) 7, 174
BseDI CCNNGG 8 cut(s) 6, 74, 110, 173, 558, 1143, 1458, 1506
BseGI GGATG 3 cut(s) 709, 1441, 1590
BseLI CCNNNNNNNGG 2 cut(s) 871, 1624
BseMI GCAATG 1 cut(s) 514
BseMII CTCAG 3 cut(s) 347, 353, 1010
BseNI ACTGG 1 cut(s) 1052
BseSI GKGCMC 1 cut(s) 1618
BseX3I CGGCCG 1 cut(s) 309
BseXI GCAGC 2 cut(s) 779, 1615
Bsh1236I CGCG 1 cut(s) 372
Bsh1285I CGRYCG 1 cut(s) 312
BshFI GGCC 5 cut(s) 172, 311, 360, 668, 1422
BshTI ACCGGT 1 cut(s) 526
BsiEI CGRYCG 1 cut(s) 312
BsiHKAI GWGCWC 2 cut(s) 1369, 1457
BsiSI CCGG 5 cut(s) 256, 357, 485, 527, 665
BslFI GGGAC 1 cut(s) 238
BslI CCNNNNNNNGG 2 cut(s) 871, 1624
BsmAI GTCTC 3 cut(s) 30, 129, 155
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 1 cut(s) 238
BsmI GAATGC 3 cut(s) 120, 1194, 1563
BsnI GGCC 5 cut(s) 172, 311, 360, 668, 1422
Bso31I GGTCTC 1 cut(s) 155
Bsp119I TTCGAA 2 cut(s) 247, 1198
Bsp1286I GDGCHC 3 cut(s) 1369, 1457, 1618
Bsp143I GATC 4 cut(s) 353, 901, 1429, 1597
Bsp19I CCATGG 2 cut(s) 74, 1458
BspACI CCGC 3 cut(s) 370, 451, 1423
BspANI GGCC 5 cut(s) 172, 311, 360, 668, 1422
BspCNI CTCAG 3 cut(s) 346, 354, 1009
BspFNI CGCG 1 cut(s) 372
BspMI ACCTGC 1 cut(s) 815
BspOI GCTAGC 1 cut(s) 1058
BspPI GGATC 2 cut(s) 348, 896
BspQI GCTCTTC 3 cut(s) 558, 595, 1524
BspT104I TTCGAA 2 cut(s) 247, 1198
BspTNI GGTCTC 1 cut(s) 155
BsrDI GCAATG 1 cut(s) 514
BsrFI RCCGGY 1 cut(s) 526
BsrI ACTGG 1 cut(s) 1052
BssAI RCCGGY 1 cut(s) 526
BssECI CCNNGG 8 cut(s) 6, 74, 110, 173, 558, 1143, 1458, 1506
BssMI GATC 4 cut(s) 353, 901, 1429, 1597
BssT1I CCWWGG 6 cut(s) 74, 110, 558, 1143, 1458, 1506
Bst2UI CCWGG 2 cut(s) 7, 174
Bst4CI ACNGT 2 cut(s) 958, 1204
Bst6I CTCTTC 4 cut(s) 6, 558, 595, 1524
BstAPI GCANNNNNTGC 2 cut(s) 530, 1181
BstBAI YACGTR 1 cut(s) 1242
BstBI TTCGAA 2 cut(s) 247, 1198
BstC8I GCNNGC 3 cut(s) 370, 1056, 1389
BstDEI CTNAG 5 cut(s) 69, 333, 362, 437, 996
BstDSI CCRYGG 2 cut(s) 74, 1458
BstF5I GGATG 3 cut(s) 709, 1441, 1590
BstFNI CGCG 1 cut(s) 372
BstH2I RGCGCY 3 cut(s) 369, 1061, 1317
BstHHI GCGC 5 cut(s) 301, 368, 1060, 1316, 1633
BstKTI GATC 4 cut(s) 356, 904, 1432, 1600
BstMAI GTCTC 3 cut(s) 30, 129, 155
BstMBI GATC 4 cut(s) 353, 901, 1429, 1597
BstMCI CGRYCG 1 cut(s) 312
BstMWI GCNNNNNNNGC 6 cut(s) 530, 764, 841, 929, 992, 1181
BstNI CCWGG 2 cut(s) 7, 174
BstSCI CCNGG 4 cut(s) 5, 172, 254, 484
BstSFI CTRYAG 1 cut(s) 28
BstSLI GKGCMC 1 cut(s) 1618
BstSNI TACGTA 1 cut(s) 1242
BstUI CGCG 1 cut(s) 372
BstV1I GCAGC 2 cut(s) 779, 1615
BstV2I GAAGAC 2 cut(s) 693, 933
BstX2I RGATCY 1 cut(s) 353
BstXI CCANNNNNNTGG 1 cut(s) 676
BstYI RGATCY 1 cut(s) 353
BstZI CGGCCG 1 cut(s) 309
BsuI GTATCC 1 cut(s) 1231
BsuRI GGCC 5 cut(s) 172, 311, 360, 668, 1422
BtgI CCRYGG 2 cut(s) 74, 1458
BtsCI GGATG 3 cut(s) 709, 1441, 1590
BtsI GCAGTG 1 cut(s) 294
BtsIMutI CAGTG 1 cut(s) 294
BveI ACCTGC 1 cut(s) 815
Cac8I GCNNGC 3 cut(s) 370, 1056, 1389
CaiI CAGNNNCTG 1 cut(s) 296
CfoI GCGC 5 cut(s) 301, 368, 1060, 1316, 1633
Cfr10I RCCGGY 1 cut(s) 526
Cfr13I GGNCC 1 cut(s) 1262
CseI GACGC 1 cut(s) 986
Csp6I GTAC 5 cut(s) 159, 445, 875, 1280, 1302
CspAI ACCGGT 1 cut(s) 526
CspCI CAANNNNNGTGG 4 cut(s) 392, 427, 1152, 1187
CviAII CATG 5 cut(s) 75, 273, 748, 1459, 1474
CviQI GTAC 5 cut(s) 159, 445, 875, 1280, 1302
DdeI CTNAG 5 cut(s) 69, 333, 362, 437, 996
DpnI GATC 4 cut(s) 355, 903, 1431, 1599
DpnII GATC 4 cut(s) 353, 901, 1429, 1597
EaeI YGGCCR 4 cut(s) 170, 309, 666, 1420
EagI CGGCCG 1 cut(s) 309
Eam1104I CTCTTC 4 cut(s) 6, 558, 595, 1524
EarI CTCTTC 4 cut(s) 6, 558, 595, 1524
Ecl136II GAGCTC 2 cut(s) 1367, 1455
EclXI CGGCCG 1 cut(s) 309
Eco105I TACGTA 1 cut(s) 1242
Eco130I CCWWGG 6 cut(s) 74, 110, 558, 1143, 1458, 1506
Eco24I GRGCYC 2 cut(s) 1369, 1457
Eco31I GGTCTC 1 cut(s) 155
Eco47I GGWCC 1 cut(s) 1262
Eco47III AGCGCT 1 cut(s) 1059
Eco52I CGGCCG 1 cut(s) 309
Eco53kI GAGCTC 2 cut(s) 1367, 1455
Eco57I CTGAAG 2 cut(s) 780, 1599
EcoICRI GAGCTC 2 cut(s) 1367, 1455
EcoRI GAATTC 1 cut(s) 846
EcoRII CCWGG 2 cut(s) 5, 172
EcoT14I CCWWGG 6 cut(s) 74, 110, 558, 1143, 1458, 1506
EcoT22I ATGCAT 1 cut(s) 1348
EcoT38I GRGCYC 2 cut(s) 1369, 1457
ErhI CCWWGG 6 cut(s) 74, 110, 558, 1143, 1458, 1506
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 5 cut(s) 78, 276, 751, 1462, 1477
FalI AAGNNNNNCTT 2 cut(s) 925, 957
FaqI GGGAC 1 cut(s) 238
FatI CATG 5 cut(s) 74, 272, 747, 1458, 1473
FauI CCCGC 1 cut(s) 377
FbaI TGATCA 2 cut(s) 1429, 1597
Fnu4HI GCNGC 3 cut(s) 768, 1423, 1629
FokI GGATG 3 cut(s) 716, 1428, 1597
FriOI GRGCYC 2 cut(s) 1369, 1457
Fsp4HI GCNGC 3 cut(s) 768, 1423, 1629
FspBI CTAG 7 cut(s) 132, 164, 731, 753, 777, 1055, 1674
FspI TGCGCA 1 cut(s) 300
GlaI GCGC 5 cut(s) 300, 367, 1059, 1315, 1632
GluI GCNGC 3 cut(s) 768, 1423, 1629
GsuI CTGGAG 1 cut(s) 1069
HaeII RGCGCY 3 cut(s) 369, 1061, 1317
HaeIII GGCC 5 cut(s) 172, 311, 360, 668, 1422
HapII CCGG 5 cut(s) 256, 357, 485, 527, 665
HgaI GACGC 1 cut(s) 986
HhaI GCGC 5 cut(s) 301, 368, 1060, 1316, 1633
Hin1II CATG 5 cut(s) 78, 276, 751, 1462, 1477
Hin6I GCGC 5 cut(s) 299, 366, 1058, 1314, 1631
HinP1I GCGC 5 cut(s) 299, 366, 1058, 1314, 1631
HincII GTYRAC 1 cut(s) 417
HindII GTYRAC 1 cut(s) 417
HindIII AAGCTT 1 cut(s) 405
HinfI GANTC 5 cut(s) 259, 331, 661, 1487, 1646
HpaII CCGG 5 cut(s) 256, 357, 485, 527, 665
HphI GGTGA 4 cut(s) 624, 986, 1243, 1651
Hpy166II GTNNAC 6 cut(s) 142, 161, 187, 288, 417, 877
Hpy188I TCNGA 5 cut(s) 126, 330, 946, 999, 1222
Hpy188III TCNNGA 7 cut(s) 132, 427, 597, 658, 753, 1411, 1554
Hpy8I GTNNAC 6 cut(s) 142, 161, 187, 288, 417, 877
Hpy99I CGWCG 1 cut(s) 1627
HpyAV CCTTC 7 cut(s) 200, 613, 955, 1222, 1253, 1554, 1574
HpyCH4III ACNGT 2 cut(s) 958, 1204
HpyCH4IV ACGT 2 cut(s) 138, 1241
HpyCH4V TGCA 9 cut(s) 56, 767, 824, 908, 932, 1184, 1208, 1346, 1441
HpyF10VI GCNNNNNNNGC 6 cut(s) 530, 764, 841, 929, 992, 1181
HpyF3I CTNAG 5 cut(s) 69, 333, 362, 437, 996
HpySE526I ACGT 2 cut(s) 138, 1241
Hsp92II CATG 5 cut(s) 78, 276, 751, 1462, 1477
HspAI GCGC 5 cut(s) 299, 366, 1058, 1314, 1631
Ksp22I TGATCA 2 cut(s) 1429, 1597
Kzo9I GATC 4 cut(s) 353, 901, 1429, 1597
LguI GCTCTTC 3 cut(s) 558, 595, 1524
LmnI GCTCC 2 cut(s) 1364, 1460
Lsp1109I GCAGC 2 cut(s) 779, 1615
LweI GCATC 8 cut(s) 754, 772, 937, 1129, 1171, 1217, 1450, 1575
MaeI CTAG 7 cut(s) 132, 164, 731, 753, 777, 1055, 1674
MaeII ACGT 2 cut(s) 138, 1241
MaeIII GTNAC 6 cut(s) 313, 630, 655, 974, 1573, 1643
MalI GATC 4 cut(s) 355, 903, 1431, 1599
MboI GATC 4 cut(s) 353, 901, 1429, 1597
MfeI CAATTG 1 cut(s) 1185
MflI RGATCY 1 cut(s) 353
MhlI GDGCHC 3 cut(s) 1369, 1457, 1618
MlyI GAGTC 2 cut(s) 325, 1640
MmeI TCCRAC 2 cut(s) 327, 1342
MnlI CCTC 8 cut(s) 54, 175, 272, 694, 1044, 1455, 1576, 1599
Mph1103I ATGCAT 1 cut(s) 1348
MroXI GAANNNNTTC 1 cut(s) 806
MseI TTAA 2 cut(s) 1122, 1349
MspI CCGG 5 cut(s) 256, 357, 485, 527, 665
MspR9I CCNGG 4 cut(s) 7, 174, 256, 486
MunI CAATTG 1 cut(s) 1185
Mva1269I GAATGC 3 cut(s) 120, 1194, 1563
MvaI CCWGG 2 cut(s) 7, 174
MvnI CGCG 1 cut(s) 372
MwoI GCNNNNNNNGC 6 cut(s) 530, 764, 841, 929, 992, 1181
NciI CCSGG 2 cut(s) 256, 486
NcoI CCATGG 2 cut(s) 74, 1458
NdeII GATC 4 cut(s) 353, 901, 1429, 1597
NheI GCTAGC 1 cut(s) 1054
NlaIII CATG 5 cut(s) 78, 276, 751, 1462, 1477
NmeAIII GCCGAG 1 cut(s) 59
NmuCI GTSAC 5 cut(s) 313, 630, 655, 974, 1643
NsbI TGCGCA 1 cut(s) 300
NsiI ATGCAT 1 cut(s) 1348
NspV TTCGAA 2 cut(s) 247, 1198
PaqCI CACCTGC 1 cut(s) 815
PciSI GCTCTTC 3 cut(s) 558, 595, 1524
PctI GAATGC 3 cut(s) 120, 1194, 1563
PdmI GAANNNNTTC 1 cut(s) 806
PfeI GAWTC 3 cut(s) 259, 661, 1487
PflMI CCANNNNNTGG 1 cut(s) 871
PfoI TCCNGGA 1 cut(s) 254
PinAI ACCGGT 1 cut(s) 526
PkrI GCNGC 3 cut(s) 769, 1424, 1630
PleI GAGTC 2 cut(s) 325, 1640
PpsI GAGTC 2 cut(s) 325, 1640
Ppu21I YACGTR 1 cut(s) 1242
PshBI ATTAAT 1 cut(s) 1349
PsiI TTATAA 1 cut(s) 1064
Psp124BI GAGCTC 2 cut(s) 1369, 1457
Psp6I CCWGG 2 cut(s) 5, 172
PspGI CCWGG 2 cut(s) 5, 172
PspPI GGNCC 1 cut(s) 1262
PstNI CAGNNNCTG 1 cut(s) 296
PsuI RGATCY 1 cut(s) 353
RsaI GTAC 5 cut(s) 160, 446, 876, 1281, 1303
RsaNI GTAC 5 cut(s) 159, 445, 875, 1280, 1302
SacI GAGCTC 2 cut(s) 1369, 1457
SapI GCTCTTC 3 cut(s) 558, 595, 1524
SaqAI TTAA 2 cut(s) 1122, 1349
SatI GCNGC 3 cut(s) 768, 1423, 1629
Sau3AI GATC 4 cut(s) 353, 901, 1429, 1597
Sau96I GGNCC 1 cut(s) 1262
ScaI AGTACT 1 cut(s) 446
SchI GAGTC 2 cut(s) 325, 1640
ScrFI CCNGG 4 cut(s) 7, 174, 256, 486
SduI GDGCHC 3 cut(s) 1369, 1457, 1618
SfaNI GCATC 8 cut(s) 754, 772, 937, 1129, 1171, 1217, 1450, 1575
SfcI CTRYAG 1 cut(s) 28
SfuI TTCGAA 2 cut(s) 247, 1198
SinI GGWCC 1 cut(s) 1262
SmlI CTYRAG 1 cut(s) 152
SmoI CTYRAG 1 cut(s) 152
SnaBI TACGTA 1 cut(s) 1242
SpeI ACTAGT 1 cut(s) 776
SsiI CCGC 3 cut(s) 370, 451, 1423
SspMI CTAG 7 cut(s) 132, 164, 731, 753, 777, 1055, 1674
SstI GAGCTC 2 cut(s) 1369, 1457
StyD4I CCNGG 4 cut(s) 5, 172, 254, 484
StyI CCWWGG 6 cut(s) 74, 110, 558, 1143, 1458, 1506
TaaI ACNGT 2 cut(s) 958, 1204
TaiI ACGT 2 cut(s) 141, 1244
TaqI TCGA 4 cut(s) 247, 539, 1198, 1591
TatI WGTACW 1 cut(s) 444
TauI GCSGC 1 cut(s) 1425
TfiI GAWTC 3 cut(s) 259, 661, 1487
Tru1I TTAA 2 cut(s) 1122, 1349
Tru9I TTAA 2 cut(s) 1122, 1349
TscAI CASTG 1 cut(s) 301
TseFI GTSAC 5 cut(s) 313, 630, 655, 974, 1643
TseI GCWGC 2 cut(s) 767, 1628
Tsp45I GTSAC 5 cut(s) 313, 630, 655, 974, 1643
TspDTI ATGAA 5 cut(s) 211, 261, 1170, 1283, 1308
TspRI CASTG 1 cut(s) 301
Van91I CCANNNNNTGG 1 cut(s) 871
VpaK11BI GGWCC 1 cut(s) 1262
VspI ATTAAT 1 cut(s) 1349
XapI RAATTY 4 cut(s) 805, 846, 910, 1115
XbaI TCTAGA 2 cut(s) 131, 752
XmnI GAANNNNTTC 1 cut(s) 806
XspI CTAG 7 cut(s) 132, 164, 731, 753, 777, 1055, 1674
ZrmI AGTACT 1 cut(s) 446
Zsp2I ATGCAT 1 cut(s) 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.