Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 286 |
| Acc36I | ACCTGC | 1 cut(s) | 371 |
| AccB1I | GGYRCC | 1 cut(s) | 872 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1603 |
| AccII | CGCG | 3 cut(s) | 410, 708, 759 |
| AccIII | TCCGGA | 1 cut(s) | 2059 |
| AciI | CCGC | 3 cut(s) | 410, 476, 787 |
| AclWI | GGATC | 6 cut(s) | 117, 179, 222, 421, 1621, 2159 |
| AcoI | YGGCCR | 3 cut(s) | 344, 509, 1355 |
| AcsI | RAATTY | 6 cut(s) | 489, 1276, 1526, 2108, 2522, 2530 |
| AcuI | CTGAAG | 3 cut(s) | 727, 1136, 1190 |
| AdeI | CACNNNGTG | 1 cut(s) | 1603 |
| AfaI | GTAC | 6 cut(s) | 5, 951, 1440, 1511, 1610, 1675 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 409, 1068, 1337, 1603, 1957, 2007 |
| AflII | CTTAAG | 1 cut(s) | 1036 |
| AflIII | ACRYGT | 3 cut(s) | 285, 802, 2101 |
| AjiI | CACGTC | 1 cut(s) | 918 |
| AluBI | AGCT | 9 cut(s) | 730, 828, 1453, 1859, 1873, 1963, 2051, 2056, 2350 |
| AluI | AGCT | 9 cut(s) | 730, 828, 1453, 1859, 1873, 1963, 2051, 2056, 2350 |
| Alw21I | GWGCWC | 2 cut(s) | 1125, 1424 |
| Alw26I | GTCTC | 4 cut(s) | 239, 511, 622, 1058 |
| AlwI | GGATC | 6 cut(s) | 117, 179, 222, 421, 1621, 2159 |
| Ama87I | CYCGRG | 1 cut(s) | 823 |
| Aor13HI | TCCGGA | 1 cut(s) | 2059 |
| AoxI | GGCC | 9 cut(s) | 344, 509, 712, 810, 1086, 1339, 1355, 1458, 2581 |
| ApeKI | GCWGC | 3 cut(s) | 551, 1185, 2347 |
| ApoI | RAATTY | 6 cut(s) | 489, 1276, 1526, 2108, 2522, 2530 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 340, 372, 2138, 2170 |
| AseI | ATTAAT | 1 cut(s) | 318 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1052, 1175, 1977 |
| AspLEI | GCGC | 4 cut(s) | 708, 710, 759, 2486 |
| AspS9I | GGNCC | 4 cut(s) | 1379, 1458, 2062, 2582 |
| AsuC2I | CCSGG | 1 cut(s) | 877 |
| AsuHPI | GGTGA | 4 cut(s) | 1726, 2020, 2171, 2345 |
| AsuII | TTCGAA | 4 cut(s) | 297, 391, 636, 1981 |
| AvaI | CYCGRG | 1 cut(s) | 823 |
| AvaII | GGWCC | 2 cut(s) | 1379, 2062 |
| BalI | TGGCCA | 1 cut(s) | 511 |
| BanI | GGYRCC | 1 cut(s) | 872 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 291, 323 |
| BbsI | GAAGAC | 1 cut(s) | 839 |
| Bbv12I | GWGCWC | 2 cut(s) | 1125, 1424 |
| BbvI | GCAGC | 3 cut(s) | 563, 1172, 2359 |
| BccI | CCATC | 5 cut(s) | 299, 439, 968, 1523, 2204 |
| BceAI | ACGGC | 2 cut(s) | 1160, 1326 |
| BcnI | CCSGG | 1 cut(s) | 877 |
| BcoDI | GTCTC | 4 cut(s) | 239, 511, 622, 1058 |
| BfaI | CTAG | 1 cut(s) | 404 |
| BfrI | CTTAAG | 1 cut(s) | 1036 |
| BfuAI | ACCTGC | 1 cut(s) | 371 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 703 |
| BisI | GCNGC | 3 cut(s) | 552, 1186, 2348 |
| BlpI | GCTNAGC | 1 cut(s) | 2052 |
| BlsI | GCNGC | 3 cut(s) | 553, 1187, 2349 |
| BmcAI | AGTACT | 2 cut(s) | 951, 1675 |
| Bme1390I | CCNGG | 1 cut(s) | 877 |
| Bme18I | GGWCC | 2 cut(s) | 1379, 2062 |
| BmeT110I | CYCGRG | 1 cut(s) | 823 |
| BmgBI | CACGTC | 1 cut(s) | 918 |
| BmgT120I | GGNCC | 4 cut(s) | 1379, 1458, 2062, 2582 |
| BmiI | GGNNCC | 3 cut(s) | 874, 929, 1381 |
| BmrFI | CCNGG | 1 cut(s) | 877 |
| BmrI | ACTGGG | 1 cut(s) | 669 |
| BmsI | GCATC | 5 cut(s) | 1237, 1854, 2104, 2409, 2495 |
| BmuI | ACTGGG | 1 cut(s) | 669 |
| BpiI | GAAGAC | 1 cut(s) | 839 |
| BpmI | CTGGAG | 1 cut(s) | 1911 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2052 |
| Bpu14I | TTCGAA | 4 cut(s) | 297, 391, 636, 1981 |
| BpuEI | CTTGAG | 1 cut(s) | 541 |
| BpuMI | CCSGG | 1 cut(s) | 877 |
| Bsa29I | ATCGAT | 2 cut(s) | 156, 1551 |
| BsaAI | YACGTR | 1 cut(s) | 805 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2190 |
| BsaJI | CCNNGG | 1 cut(s) | 2197 |
| BsaWI | WCCGGW | 1 cut(s) | 2059 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1909, 1939 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 409, 1068, 1337, 1603, 1957, 2007 |
| Bse118I | RCCGGY | 1 cut(s) | 924 |
| Bse1I | ACTGG | 5 cut(s) | 664, 1081, 1671, 1928, 2476 |
| Bse3DI | GCAATG | 1 cut(s) | 1368 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2190 |
| BseAI | TCCGGA | 1 cut(s) | 2059 |
| BseCI | ATCGAT | 2 cut(s) | 156, 1551 |
| BseDI | CCNNGG | 1 cut(s) | 2197 |
| BseGI | GGATG | 1 cut(s) | 160 |
| BseJI | GATNNNNATC | 1 cut(s) | 2190 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 409, 1068, 1337, 1603, 1957, 2007 |
| BseMI | GCAATG | 1 cut(s) | 1368 |
| BseMII | CTCAG | 3 cut(s) | 506, 1398, 2043 |
| BseNI | ACTGG | 5 cut(s) | 664, 1081, 1671, 1928, 2476 |
| BsePI | GCGCGC | 1 cut(s) | 706 |
| BseXI | GCAGC | 3 cut(s) | 563, 1172, 2359 |
| Bsh1236I | CGCG | 3 cut(s) | 410, 708, 759 |
| Bsh1285I | CGRYCG | 5 cut(s) | 351, 576, 1062, 1132, 1291 |
| BshFI | GGCC | 9 cut(s) | 346, 511, 714, 812, 1088, 1341, 1357, 1460, 2583 |
| BshNI | GGYRCC | 1 cut(s) | 872 |
| BshVI | ATCGAT | 2 cut(s) | 156, 1551 |
| BsiEI | CGRYCG | 5 cut(s) | 351, 576, 1062, 1132, 1291 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1125, 1424 |
| BsiHKCI | CYCGRG | 1 cut(s) | 823 |
| BsiSI | CCGG | 4 cut(s) | 876, 925, 1354, 2060 |
| BslFI | GGGAC | 1 cut(s) | 639 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 409, 1068, 1337, 1603, 1957, 2007 |
| BsmAI | GTCTC | 4 cut(s) | 239, 511, 622, 1058 |
| BsmFI | GGGAC | 1 cut(s) | 639 |
| BsmI | GAATGC | 1 cut(s) | 19 |
| BsnI | GGCC | 9 cut(s) | 346, 511, 714, 812, 1088, 1341, 1357, 1460, 2583 |
| BsoBI | CYCGRG | 1 cut(s) | 823 |
| Bsp119I | TTCGAA | 4 cut(s) | 297, 391, 636, 1981 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1125, 1424 |
| Bsp13I | TCCGGA | 1 cut(s) | 2059 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2052 |
| BspACI | CCGC | 3 cut(s) | 410, 476, 787 |
| BspANI | GGCC | 9 cut(s) | 346, 511, 714, 812, 1088, 1341, 1357, 1460, 2583 |
| BspCNI | CTCAG | 3 cut(s) | 507, 1399, 2044 |
| BspDI | ATCGAT | 2 cut(s) | 156, 1551 |
| BspEI | TCCGGA | 1 cut(s) | 2059 |
| BspFNI | CGCG | 3 cut(s) | 410, 708, 759 |
| BspLI | GGNNCC | 3 cut(s) | 874, 929, 1381 |
| BspMI | ACCTGC | 1 cut(s) | 371 |
| BspPI | GGATC | 6 cut(s) | 117, 179, 222, 421, 1621, 2159 |
| BspT104I | TTCGAA | 4 cut(s) | 297, 391, 636, 1981 |
| BspT107I | GGYRCC | 1 cut(s) | 872 |
| BspTI | CTTAAG | 1 cut(s) | 1036 |
| BsrDI | GCAATG | 1 cut(s) | 1368 |
| BsrFI | RCCGGY | 1 cut(s) | 924 |
| BsrI | ACTGG | 5 cut(s) | 664, 1081, 1671, 1928, 2476 |
| BssAI | RCCGGY | 1 cut(s) | 924 |
| BssECI | CCNNGG | 1 cut(s) | 2197 |
| BssHII | GCGCGC | 1 cut(s) | 706 |
| BssT1I | CCWWGG | 1 cut(s) | 2197 |
| Bst4CI | ACNGT | 7 cut(s) | 651, 890, 1152, 1196, 2150, 2277, 2415 |
| Bst6I | CTCTTC | 4 cut(s) | 1843, 2301, 2331, 2473 |
| BstAFI | CTTAAG | 1 cut(s) | 1036 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1784 |
| BstBAI | YACGTR | 1 cut(s) | 805 |
| BstBI | TTCGAA | 4 cut(s) | 297, 391, 636, 1981 |
| BstC8I | GCNNGC | 6 cut(s) | 242, 474, 666, 708, 712, 1183 |
| BstDEI | CTNAG | 6 cut(s) | 515, 1311, 1407, 1943, 2052, 2404 |
| BstEII | GGTNACC | 1 cut(s) | 1076 |
| BstF5I | GGATG | 1 cut(s) | 160 |
| BstFNI | CGCG | 3 cut(s) | 410, 708, 759 |
| BstHHI | GCGC | 4 cut(s) | 708, 710, 759, 2486 |
| BstMAI | GTCTC | 4 cut(s) | 239, 511, 622, 1058 |
| BstMCI | CGRYCG | 5 cut(s) | 351, 576, 1062, 1132, 1291 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 372, 508, 551, 703, 1408, 1784, 1993, 2321 |
| BstNSI | RCATGY | 2 cut(s) | 2105, 2501 |
| BstPI | GGTNACC | 1 cut(s) | 1076 |
| BstSCI | CCNGG | 1 cut(s) | 875 |
| BstUI | CGCG | 3 cut(s) | 410, 708, 759 |
| BstV1I | GCAGC | 3 cut(s) | 563, 1172, 2359 |
| BstV2I | GAAGAC | 1 cut(s) | 839 |
| BstX2I | RGATCY | 3 cut(s) | 109, 227, 1613 |
| BstYI | RGATCY | 3 cut(s) | 109, 227, 1613 |
| Bsu15I | ATCGAT | 2 cut(s) | 156, 1551 |
| BsuRI | GGCC | 9 cut(s) | 346, 511, 714, 812, 1088, 1341, 1357, 1460, 2583 |
| BsuTUI | ATCGAT | 2 cut(s) | 156, 1551 |
| BtrI | CACGTC | 1 cut(s) | 918 |
| BtsCI | GGATG | 1 cut(s) | 160 |
| BtsI | GCAGTG | 2 cut(s) | 251, 1103 |
| BtsIMutI | CAGTG | 8 cut(s) | 251, 512, 647, 657, 895, 1103, 1157, 1201 |
| BveI | ACCTGC | 1 cut(s) | 371 |
| Cac8I | GCNNGC | 6 cut(s) | 242, 474, 666, 708, 712, 1183 |
| CfoI | GCGC | 4 cut(s) | 708, 710, 759, 2486 |
| Cfr10I | RCCGGY | 1 cut(s) | 924 |
| Cfr13I | GGNCC | 4 cut(s) | 1379, 1458, 2062, 2582 |
| ClaI | ATCGAT | 2 cut(s) | 156, 1551 |
| CseI | GACGC | 1 cut(s) | 529 |
| Csp6I | GTAC | 6 cut(s) | 4, 950, 1439, 1510, 1609, 1674 |
| CviAII | CATG | 7 cut(s) | 589, 614, 1532, 1626, 2102, 2434, 2498 |
| CviQI | GTAC | 6 cut(s) | 4, 950, 1439, 1510, 1609, 1674 |
| DdeI | CTNAG | 6 cut(s) | 515, 1311, 1407, 1943, 2052, 2404 |
| DraI | TTTAAA | 3 cut(s) | 1938, 2529, 2556 |
| DraIII | CACNNNGTG | 1 cut(s) | 1603 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 286 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 286 |
| EaeI | YGGCCR | 3 cut(s) | 344, 509, 1355 |
| Eam1104I | CTCTTC | 4 cut(s) | 1843, 2301, 2331, 2473 |
| EarI | CTCTTC | 4 cut(s) | 1843, 2301, 2331, 2473 |
| Eco130I | CCWWGG | 1 cut(s) | 2197 |
| Eco47I | GGWCC | 2 cut(s) | 1379, 2062 |
| Eco57I | CTGAAG | 3 cut(s) | 727, 1136, 1190 |
| Eco88I | CYCGRG | 1 cut(s) | 823 |
| Eco91I | GGTNACC | 1 cut(s) | 1076 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1379 |
| EcoO65I | GGTNACC | 1 cut(s) | 1076 |
| EcoT14I | CCWWGG | 1 cut(s) | 2197 |
| ErhI | CCWWGG | 1 cut(s) | 2197 |
| FaeI | CATG | 7 cut(s) | 592, 617, 1535, 1629, 2105, 2437, 2501 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2040, 2072, 2387, 2419, 2486, 2518 |
| FaqI | GGGAC | 1 cut(s) | 639 |
| FatI | CATG | 7 cut(s) | 588, 613, 1531, 1625, 2101, 2433, 2497 |
| FauI | CCCGC | 1 cut(s) | 403 |
| Fnu4HI | GCNGC | 3 cut(s) | 552, 1186, 2348 |
| FokI | GGATG | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 3 cut(s) | 552, 1186, 2348 |
| FspBI | CTAG | 1 cut(s) | 404 |
| GlaI | GCGC | 4 cut(s) | 707, 709, 758, 2485 |
| GluI | GCNGC | 3 cut(s) | 552, 1186, 2348 |
| GsuI | CTGGAG | 1 cut(s) | 1911 |
| HaeIII | GGCC | 9 cut(s) | 346, 511, 714, 812, 1088, 1341, 1357, 1460, 2583 |
| HapII | CCGG | 4 cut(s) | 876, 925, 1354, 2060 |
| HgaI | GACGC | 1 cut(s) | 529 |
| HhaI | GCGC | 4 cut(s) | 708, 710, 759, 2486 |
| Hin1II | CATG | 7 cut(s) | 592, 617, 1535, 1629, 2105, 2437, 2501 |
| Hin6I | GCGC | 4 cut(s) | 706, 708, 757, 2484 |
| HinP1I | GCGC | 4 cut(s) | 706, 708, 757, 2484 |
| HincII | GTYRAC | 3 cut(s) | 580, 678, 766 |
| HindII | GTYRAC | 3 cut(s) | 580, 678, 766 |
| HindIII | AAGCTT | 1 cut(s) | 1451 |
| HinfI | GANTC | 7 cut(s) | 218, 1042, 1138, 1362, 1391, 2141, 2366 |
| HpaI | GTTAAC | 1 cut(s) | 580 |
| HpaII | CCGG | 4 cut(s) | 876, 925, 1354, 2060 |
| HphI | GGTGA | 4 cut(s) | 1726, 2020, 2171, 2345 |
| Hpy166II | GTNNAC | 7 cut(s) | 580, 678, 766, 860, 1512, 1609, 2401 |
| Hpy188I | TCNGA | 8 cut(s) | 172, 418, 1047, 1618, 1863, 2146, 2371, 2381 |
| Hpy188III | TCNNGA | 8 cut(s) | 113, 772, 823, 971, 1057, 1723, 2060, 2292 |
| Hpy8I | GTNNAC | 7 cut(s) | 580, 678, 766, 860, 1512, 1609, 2401 |
| Hpy99I | CGWCG | 4 cut(s) | 442, 545, 872, 1013 |
| HpyCH4III | ACNGT | 7 cut(s) | 651, 890, 1152, 1196, 2150, 2277, 2415 |
| HpyCH4IV | ACGT | 7 cut(s) | 285, 497, 737, 804, 917, 1011, 1495 |
| HpyCH4V | TGCA | 9 cut(s) | 244, 551, 853, 1250, 1373, 1778, 1787, 2117, 2347 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 372, 508, 551, 703, 1408, 1784, 1993, 2321 |
| HpyF3I | CTNAG | 6 cut(s) | 515, 1311, 1407, 1943, 2052, 2404 |
| HpySE526I | ACGT | 7 cut(s) | 285, 497, 737, 804, 917, 1011, 1495 |
| Hsp92II | CATG | 7 cut(s) | 592, 617, 1535, 1629, 2105, 2437, 2501 |
| HspAI | GCGC | 4 cut(s) | 706, 708, 757, 2484 |
| Kpn2I | TCCGGA | 1 cut(s) | 2059 |
| KspAI | GTTAAC | 1 cut(s) | 580 |
| LmnI | GCTCC | 4 cut(s) | 933, 1419, 1878, 1960 |
| Lsp1109I | GCAGC | 3 cut(s) | 563, 1172, 2359 |
| LweI | GCATC | 5 cut(s) | 1237, 1854, 2104, 2409, 2495 |
| MaeI | CTAG | 1 cut(s) | 404 |
| MaeII | ACGT | 7 cut(s) | 285, 497, 737, 804, 917, 1011, 1495 |
| MaeIII | GTNAC | 6 cut(s) | 562, 718, 884, 1031, 1076, 2438 |
| MfeI | CAATTG | 1 cut(s) | 1885 |
| MflI | RGATCY | 3 cut(s) | 109, 227, 1613 |
| MhlI | GDGCHC | 2 cut(s) | 1125, 1424 |
| MlsI | TGGCCA | 1 cut(s) | 511 |
| MluNI | TGGCCA | 1 cut(s) | 511 |
| MlyI | GAGTC | 2 cut(s) | 227, 1385 |
| MmeI | TCCRAC | 3 cut(s) | 195, 465, 2394 |
| Mox20I | TGGCCA | 1 cut(s) | 511 |
| MroI | TCCGGA | 1 cut(s) | 2059 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1052, 1175, 1977 |
| MscI | TGGCCA | 1 cut(s) | 511 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1604, 1712 |
| Msp20I | TGGCCA | 1 cut(s) | 511 |
| MspCI | CTTAAG | 1 cut(s) | 1036 |
| MspI | CCGG | 4 cut(s) | 876, 925, 1354, 2060 |
| MspR9I | CCNGG | 1 cut(s) | 877 |
| MunI | CAATTG | 1 cut(s) | 1885 |
| Mva1269I | GAATGC | 1 cut(s) | 19 |
| MvnI | CGCG | 3 cut(s) | 410, 708, 759 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 372, 508, 551, 703, 1408, 1784, 1993, 2321 |
| NciI | CCSGG | 1 cut(s) | 877 |
| NlaIII | CATG | 7 cut(s) | 592, 617, 1535, 1629, 2105, 2437, 2501 |
| NlaIV | GGNNCC | 3 cut(s) | 874, 929, 1381 |
| NmeAIII | GCCGAG | 3 cut(s) | 216, 392, 740 |
| NmuCI | GTSAC | 2 cut(s) | 562, 884 |
| NspI | RCATGY | 2 cut(s) | 2105, 2501 |
| NspV | TTCGAA | 4 cut(s) | 297, 391, 636, 1981 |
| PaeR7I | CTCGAG | 1 cut(s) | 823 |
| PauI | GCGCGC | 1 cut(s) | 706 |
| PciI | ACATGT | 1 cut(s) | 2101 |
| PctI | GAATGC | 1 cut(s) | 19 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1052, 1175, 1977 |
| PfeI | GAWTC | 5 cut(s) | 1042, 1138, 1362, 2141, 2366 |
| PflFI | GACNNNGTC | 2 cut(s) | 404, 614 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1603 |
| PkrI | GCNGC | 3 cut(s) | 553, 1187, 2349 |
| Ple19I | CGATCG | 1 cut(s) | 1291 |
| PleI | GAGTC | 2 cut(s) | 226, 1385 |
| PpsI | GAGTC | 2 cut(s) | 226, 1385 |
| Ppu21I | YACGTR | 1 cut(s) | 805 |
| PpuMI | RGGWCCY | 1 cut(s) | 1379 |
| PscI | ACATGT | 1 cut(s) | 2101 |
| PshBI | ATTAAT | 1 cut(s) | 318 |
| Psp5II | RGGWCCY | 1 cut(s) | 1379 |
| PspEI | GGTNACC | 1 cut(s) | 1076 |
| PspN4I | GGNNCC | 3 cut(s) | 874, 929, 1381 |
| PspPI | GGNCC | 4 cut(s) | 1379, 1458, 2062, 2582 |
| PspPPI | RGGWCCY | 1 cut(s) | 1379 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 970, 1002 |
| PsuI | RGATCY | 3 cut(s) | 109, 227, 1613 |
| PsyI | GACNNNGTC | 2 cut(s) | 404, 614 |
| PteI | GCGCGC | 1 cut(s) | 706 |
| PvuI | CGATCG | 1 cut(s) | 1291 |
| RsaI | GTAC | 6 cut(s) | 5, 951, 1440, 1511, 1610, 1675 |
| RsaNI | GTAC | 6 cut(s) | 4, 950, 1439, 1510, 1609, 1674 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1604, 1712 |
| SatI | GCNGC | 3 cut(s) | 552, 1186, 2348 |
| Sau96I | GGNCC | 4 cut(s) | 1379, 1458, 2062, 2582 |
| ScaI | AGTACT | 2 cut(s) | 951, 1675 |
| SchI | GAGTC | 2 cut(s) | 227, 1385 |
| ScrFI | CCNGG | 1 cut(s) | 877 |
| SduI | GDGCHC | 2 cut(s) | 1125, 1424 |
| SfaNI | GCATC | 5 cut(s) | 1237, 1854, 2104, 2409, 2495 |
| Sfr274I | CTCGAG | 1 cut(s) | 823 |
| SfuI | TTCGAA | 4 cut(s) | 297, 391, 636, 1981 |
| SinI | GGWCC | 2 cut(s) | 1379, 2062 |
| SlaI | CTCGAG | 1 cut(s) | 823 |
| SmiI | ATTTAAAT | 1 cut(s) | 1938 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1604, 1712 |
| SmlI | CTYRAG | 3 cut(s) | 556, 823, 1036 |
| SmoI | CTYRAG | 3 cut(s) | 556, 823, 1036 |
| SsiI | CCGC | 3 cut(s) | 410, 476, 787 |
| SspI | AATATT | 1 cut(s) | 1637 |
| SspMI | CTAG | 1 cut(s) | 404 |
| StyD4I | CCNGG | 1 cut(s) | 875 |
| StyI | CCWWGG | 1 cut(s) | 2197 |
| SwaI | ATTTAAAT | 1 cut(s) | 1938 |
| TaaI | ACNGT | 7 cut(s) | 651, 890, 1152, 1196, 2150, 2277, 2415 |
| TaiI | ACGT | 7 cut(s) | 288, 500, 740, 807, 920, 1014, 1498 |
| TaqII | GACCGA | 4 cut(s) | 365, 562, 1076, 1118 |
| TatI | WGTACW | 3 cut(s) | 949, 1438, 1673 |
| TfiI | GAWTC | 5 cut(s) | 1042, 1138, 1362, 2141, 2366 |
| TscAI | CASTG | 8 cut(s) | 251, 519, 654, 664, 895, 1103, 1157, 1201 |
| TseFI | GTSAC | 2 cut(s) | 562, 884 |
| TseI | GCWGC | 3 cut(s) | 551, 1185, 2347 |
| Tsp45I | GTSAC | 2 cut(s) | 562, 884 |
| TspGWI | ACGGA | 1 cut(s) | 1626 |
| TspRI | CASTG | 8 cut(s) | 251, 519, 654, 664, 895, 1103, 1157, 1201 |
| Tth111I | GACNNNGTC | 2 cut(s) | 404, 614 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1603 |
| Vha464I | CTTAAG | 1 cut(s) | 1036 |
| VpaK11BI | GGWCC | 2 cut(s) | 1379, 2062 |
| VspI | ATTAAT | 1 cut(s) | 318 |
| XapI | RAATTY | 6 cut(s) | 489, 1276, 1526, 2108, 2522, 2530 |
| XceI | RCATGY | 2 cut(s) | 2105, 2501 |
| XhoI | CTCGAG | 1 cut(s) | 823 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1052, 1175, 1977 |
| XspI | CTAG | 1 cut(s) | 404 |
| ZrmI | AGTACT | 2 cut(s) | 951, 1675 |