Rroxscaffold_2G00082210

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000063
Physical Location & Seq
Forward (+)
5092896 .. 5095039
2144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00082210.1

Sequence Viewer

Length: 678 bp
ATGTGCATCCCGGTTTCAAAACACTTCCATCAACACTTCAACCATTTTAAGATGAAAATATTTCAACCAAGTAGCACACTAACTCCTCCTTTTTCTATCTGGTGGTCAAGTTATTCATCAAAATTTGTCAGTGCAGATCTGATAGACTTATTTACTACACGAATGTTAAAAGGTATCTCTAATGGTCCGGAGTATCGGGGGGGAGCTCAGAAAAGGGGACGAATAGATGAACATGTGGATAACCCGAATGACCGAGATGGAGATAATCACTCTGCCTCAAAGAAACGAAACACCATTCTTATTATTGATATTACTGAAATCTCTCTTTCTAACTCTGGTGACAGCAACCACACAGTAGAATTAGTCCTCGATTATAATGAAGCTGCCAATGAGACTTGGGTGGAAGGTGAAGACACCATGTCAATTGAAGATTATGCTCAATCCCTACCCAAGGATGATGAGGTCATTCCACCAACTCATCTTCTATCCGCAGATACCTTAGCTTTGCTAGACAAGCTCACCGATCAACAAACTAGCCATGAACAAGAGATGGTCGACAATGACCAAATAGCAGTAGCGGCCAAGTTTGTAGAGGATCTTTGTCATACTGAACTTGTAGGCATGGTCGGTGATAACCTCTACAGCCATTTCAAGGAGGTGCTAAACGTTTTGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

225

Amino Acids

25.37

Weight (kDa)

4.81

Isoelectric Point (pI)

26.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 375
AccI GTMKAC 1 cut(s) 555
AccIII TCCGGA 1 cut(s) 187
AciI CCGC 2 cut(s) 489, 578
AclI AACGTT 1 cut(s) 666
AclWI GGATC 1 cut(s) 603
AcoI YGGCCR 1 cut(s) 579
AcsI RAATTY 1 cut(s) 122
AfiI CCNNNNNNNGG 2 cut(s) 451, 652
AflIII ACRYGT 1 cut(s) 232
AgsI TTSAA 5 cut(s) 18, 40, 65, 428, 652
AhdI GACNNNNNGTC 1 cut(s) 418
AluBI AGCT 4 cut(s) 206, 383, 503, 517
AluI AGCT 4 cut(s) 206, 383, 503, 517
Alw21I GWGCWC 1 cut(s) 208
Alw26I GTCTC 1 cut(s) 386
AlwI GGATC 1 cut(s) 603
Aor13HI TCCGGA 1 cut(s) 187
AoxI GGCC 1 cut(s) 579
ApeKI GCWGC 1 cut(s) 383
ApoI RAATTY 1 cut(s) 122
AspS9I GGNCC 1 cut(s) 185
AsuC2I CCSGG 1 cut(s) 11
AsuHPI GGTGA 4 cut(s) 350, 419, 511, 641
AvaII GGWCC 1 cut(s) 185
BanII GRGCYC 1 cut(s) 208
BbsI GAAGAC 1 cut(s) 417
Bbv12I GWGCWC 1 cut(s) 208
BbvI GCAGC 1 cut(s) 370
BccI CCATC 3 cut(s) 36, 251, 544
BcnI CCSGG 1 cut(s) 11
BcoDI GTCTC 1 cut(s) 386
BfaI CTAG 2 cut(s) 509, 534
BfmI CTRYAG 1 cut(s) 640
BglII AGATCT 1 cut(s) 136
BisI GCNGC 2 cut(s) 384, 579
BlsI GCNGC 2 cut(s) 385, 580
Bme1390I CCNGG 1 cut(s) 11
Bme18I GGWCC 1 cut(s) 185
BmeRI GACNNNNNGTC 1 cut(s) 418
BmgT120I GGNCC 1 cut(s) 185
BmrFI CCNGG 1 cut(s) 11
BmsI GCATC 1 cut(s) 15
BpiI GAAGAC 1 cut(s) 417
Bpu10I CCTNAGC 1 cut(s) 499
BpuMI CCSGG 1 cut(s) 11
BsaJI CCNNGG 1 cut(s) 450
BsaWI WCCGGW 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 67, 97
Bsc4I CCNNNNNNNGG 2 cut(s) 451, 652
BseAI TCCGGA 1 cut(s) 187
BseDI CCNNGG 1 cut(s) 450
BseGI GGATG 2 cut(s) 6, 460
BseLI CCNNNNNNNGG 2 cut(s) 451, 652
BseMII CTCAG 1 cut(s) 221
BseRI GAGGAG 1 cut(s) 75
BseXI GCAGC 1 cut(s) 370
BsgI GTGCAG 1 cut(s) 153
BshFI GGCC 1 cut(s) 581
BsiHKAI GWGCWC 1 cut(s) 208
BsiSI CCGG 2 cut(s) 11, 188
BslFI GGGAC 1 cut(s) 231
BslI CCNNNNNNNGG 2 cut(s) 451, 652
BsmAI GTCTC 1 cut(s) 386
BsmFI GGGAC 1 cut(s) 231
BsnI GGCC 1 cut(s) 581
Bsp1286I GDGCHC 1 cut(s) 208
Bsp13I TCCGGA 1 cut(s) 187
Bsp143I GATC 3 cut(s) 136, 523, 595
BspACI CCGC 2 cut(s) 489, 578
BspANI GGCC 1 cut(s) 581
BspCNI CTCAG 1 cut(s) 220
BspEI TCCGGA 1 cut(s) 187
BspPI GGATC 1 cut(s) 603
BssECI CCNNGG 1 cut(s) 450
BssMI GATC 3 cut(s) 136, 523, 595
BssT1I CCWWGG 1 cut(s) 450
Bst4CI ACNGT 1 cut(s) 355
BstDEI CTNAG 2 cut(s) 207, 499
BstENI CCTNNNNNAGG 1 cut(s) 449
BstF5I GGATG 2 cut(s) 6, 460
BstKTI GATC 3 cut(s) 139, 526, 598
BstMAI GTCTC 1 cut(s) 386
BstMBI GATC 3 cut(s) 136, 523, 595
BstMWI GCNNNNNNNGC 2 cut(s) 514, 578
BstNSI RCATGY 1 cut(s) 236
BstSCI CCNGG 1 cut(s) 9
BstSFI CTRYAG 1 cut(s) 640
BstV1I GCAGC 1 cut(s) 370
BstV2I GAAGAC 1 cut(s) 417
BstX2I RGATCY 2 cut(s) 136, 595
BstYI RGATCY 2 cut(s) 136, 595
BsuRI GGCC 1 cut(s) 581
BtsCI GGATG 2 cut(s) 6, 460
BtsIMutI CAGTG 1 cut(s) 136
Cfr13I GGNCC 1 cut(s) 185
CviAII CATG 4 cut(s) 233, 418, 539, 622
CviJI RGCY 7 cut(s) 206, 383, 503, 517, 537, 581, 645
CviKI_1 RGCY 7 cut(s) 206, 383, 503, 517, 537, 581, 645
DdeI CTNAG 2 cut(s) 207, 499
DpnI GATC 3 cut(s) 138, 525, 597
DpnII GATC 3 cut(s) 136, 523, 595
DriI GACNNNNNGTC 1 cut(s) 418
EaeI YGGCCR 1 cut(s) 579
Eam1105I GACNNNNNGTC 1 cut(s) 418
Ecl136II GAGCTC 1 cut(s) 206
Eco130I CCWWGG 1 cut(s) 450
Eco24I GRGCYC 1 cut(s) 208
Eco47I GGWCC 1 cut(s) 185
Eco53kI GAGCTC 1 cut(s) 206
EcoICRI GAGCTC 1 cut(s) 206
EcoNI CCTNNNNNAGG 1 cut(s) 449
EcoT14I CCWWGG 1 cut(s) 450
EcoT38I GRGCYC 1 cut(s) 208
ErhI CCWWGG 1 cut(s) 450
FaeI CATG 4 cut(s) 236, 421, 542, 625
FaiI YATR 7 cut(s) 234, 375, 419, 435, 540, 606, 623
FaqI GGGAC 1 cut(s) 231
FatI CATG 4 cut(s) 232, 417, 538, 621
FblI GTMKAC 1 cut(s) 555
Fnu4HI GCNGC 2 cut(s) 384, 579
FokI GGATG 1 cut(s) 467
FriOI GRGCYC 1 cut(s) 208
Fsp4HI GCNGC 2 cut(s) 384, 579
FspBI CTAG 2 cut(s) 509, 534
GluI GCNGC 2 cut(s) 384, 579
HaeIII GGCC 1 cut(s) 581
HapII CCGG 2 cut(s) 11, 188
Hin1II CATG 4 cut(s) 236, 421, 542, 625
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HpaII CCGG 2 cut(s) 11, 188
HphI GGTGA 4 cut(s) 350, 419, 511, 641
Hpy166II GTNNAC 1 cut(s) 556
Hpy188I TCNGA 2 cut(s) 141, 210
Hpy188III TCNNGA 1 cut(s) 188
Hpy8I GTNNAC 1 cut(s) 556
HpyAV CCTTC 1 cut(s) 398
HpyCH4III ACNGT 1 cut(s) 355
HpyCH4IV ACGT 1 cut(s) 666
HpyCH4V TGCA 2 cut(s) 6, 134
HpyF10VI GCNNNNNNNGC 2 cut(s) 514, 578
HpyF3I CTNAG 2 cut(s) 207, 499
HpySE526I ACGT 1 cut(s) 666
Hsp92II CATG 4 cut(s) 236, 421, 542, 625
Kpn2I TCCGGA 1 cut(s) 187
Kzo9I GATC 3 cut(s) 136, 523, 595
LmnI GCTCC 1 cut(s) 203
LpnPI CCDG 4 cut(s) 24, 85, 201, 321
Lsp1109I GCAGC 1 cut(s) 370
LweI GCATC 1 cut(s) 15
MaeI CTAG 2 cut(s) 509, 534
MaeII ACGT 1 cut(s) 666
MaeIII GTNAC 1 cut(s) 338
MalI GATC 3 cut(s) 138, 525, 597
MboI GATC 3 cut(s) 136, 523, 595
MboII GAAGA 3 cut(s) 422, 440, 473
MfeI CAATTG 1 cut(s) 423
MflI RGATCY 2 cut(s) 136, 595
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 3 cut(s) 122, 359, 423
MnlI CCTC 7 cut(s) 96, 286, 377, 454, 586, 647, 649
MroI TCCGGA 1 cut(s) 187
MseI TTAA 2 cut(s) 48, 167
MspI CCGG 2 cut(s) 11, 188
MspR9I CCNGG 1 cut(s) 11
MunI CAATTG 1 cut(s) 423
MwoI GCNNNNNNNGC 2 cut(s) 514, 578
NciI CCSGG 1 cut(s) 11
NdeII GATC 3 cut(s) 136, 523, 595
NlaIII CATG 4 cut(s) 236, 421, 542, 625
NmuCI GTSAC 1 cut(s) 338
NspI RCATGY 1 cut(s) 236
PciI ACATGT 1 cut(s) 232
PkrI GCNGC 2 cut(s) 385, 580
PscI ACATGT 1 cut(s) 232
PsiI TTATAA 1 cut(s) 375
Psp124BI GAGCTC 1 cut(s) 208
Psp1406I AACGTT 1 cut(s) 666
PspPI GGNCC 1 cut(s) 185
PsuI RGATCY 2 cut(s) 136, 595
SacI GAGCTC 1 cut(s) 208
SalI GTCGAC 1 cut(s) 554
SaqAI TTAA 2 cut(s) 48, 167
SatI GCNGC 2 cut(s) 384, 579
Sau3AI GATC 3 cut(s) 136, 523, 595
Sau96I GGNCC 1 cut(s) 185
ScrFI CCNGG 1 cut(s) 11
SduI GDGCHC 1 cut(s) 208
SfaNI GCATC 1 cut(s) 15
SfcI CTRYAG 1 cut(s) 640
SinI GGWCC 1 cut(s) 185
Sse9I AATT 3 cut(s) 122, 359, 423
SsiI CCGC 2 cut(s) 489, 578
SspI AATATT 1 cut(s) 60
SspMI CTAG 2 cut(s) 509, 534
SstI GAGCTC 1 cut(s) 208
StyD4I CCNGG 1 cut(s) 9
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 1 cut(s) 355
TaiI ACGT 1 cut(s) 669
TaqI TCGA 2 cut(s) 369, 555
TaqII GACCGA 1 cut(s) 267
TasI AATT 3 cut(s) 122, 359, 423
TauI GCSGC 1 cut(s) 581
Tru1I TTAA 2 cut(s) 48, 167
Tru9I TTAA 2 cut(s) 48, 167
TscAI CASTG 1 cut(s) 136
TseFI GTSAC 1 cut(s) 338
TseI GCWGC 1 cut(s) 383
Tsp45I GTSAC 1 cut(s) 338
TspDTI ATGAA 5 cut(s) 68, 105, 243, 393, 555
TspRI CASTG 1 cut(s) 136
VpaK11BI GGWCC 1 cut(s) 185
XagI CCTNNNNNAGG 1 cut(s) 449
XapI RAATTY 1 cut(s) 122
XceI RCATGY 1 cut(s) 236
XmiI GTMKAC 1 cut(s) 555
XspI CTAG 2 cut(s) 509, 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.