Rh1CG187900

dipeptidyl-peptidase activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
40996314 .. 40997821
1508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG187900.1

Sequence Viewer

Length: 1191 bp
ATGTCCAAGGATGAGTTTGCCATATGTTACAGCCGAGATCACCCTTCTTGTCTTGCGATTGACATATCAACACTATGGGAGAAGAAATTAGACTTGGATGTGATTCTATCTTGGGGAAGTATTCTGATTCCTCGAGACTTGAATTACGGCCTCAAAGGTACGGTGGGTCGGTATGGTGTTGAGGTTTATCTTCCCAATTTCGTTGCACGTCAGCTTGGCTTCATACAGAGTTGTCCGGCCTTATTCTTAATGTCAAGAAACCACTTCTCGTCATGGAGAGATGGGTTCACACGAACTTCTCAGTGTTCGGCCGTTGGTAACTATTATGAGGAGCAATTTGGCAAGTTTGAGAGGTCCGGCCTAAAGCCTCGTTGTCCTGATCATAGAGCCACCCCACCCTTCCAAGCTTGGTGGTCGACTTTTATCATGAAAAATCTTGGAAAGGACTTGGCTGGGACCCAACGTGCTGCATTACAAGGACTTCCGAACTTGCTAAGCCCCAAGGAAGGTAATGGTAAGAAGAAAGCGCCGGATGGCAAGTCAAAATCAACCAAAGGATCCTCTAAACAAGGTAATCTTCAAACCAATCTTTCCGATTTCTGTTTACATATTTTCCTTCTAATGTTTTGCTACTCTTCAGGACAAACATCGAAGAAACGTGGCTCAACATTGGGGCATACCCGAAACGCCAAGAAAATAAAGAAATCATCCGACGTGGTGGAGAATTCGGTCACAAACCCGACGGACACTATGGTTAGTGAGGACATATTTTTTGAGGCTAATATGGATGATGGCCACGATGCTTTGGCCGAAAACCAAAATACGTCTGAAATTGAGGATATGGCCGAAACTGGTGACGCCTCAATCAATAGCGCGGACTCGGCTGATAGTGAAGGTTCTTCGGAAGAAGTTCAATCAGAAAGTGGCGATCAAGAGAGAGATGGCCGCATTGATTACTCTCTGCCCCTACTAGAAAATTCCTTGATTGAGATTGACATGGACGACTTGGGTGAGAAACAGATTCCTAACACACCAACCATCGGCCAACAAATTGCAATCTTAGACAACCCTTCCACGGATGTTGAGGAAATTAATGTACTTGGCCGAGAAGAGCTATGTAACCCTCCAACACTTGTTCGGAGAATCTCGAAGCAGTTCGACCCTGGAGTTGGCTCTTCTCAACCCAACTGA

Protein Analysis

396

Amino Acids

43.76

Weight (kDa)

5.01

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000063)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica MD05G1017000.v1.1
prunus_persica Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 416
AccII CGCG 1 cut(s) 875
AciI CCGC 2 cut(s) 875, 946
AclWI GGATC 2 cut(s) 552, 565
AcoI YGGCCR 7 cut(s) 309, 793, 807, 843, 943, 1042, 1102
AcsI RAATTY 2 cut(s) 724, 976
AcuI CTGAAG 1 cut(s) 621
AcyI GRCGYC 1 cut(s) 858
AfaI GTAC 2 cut(s) 160, 1098
AfiI CCNNNNNNNGG 4 cut(s) 506, 1040, 1075, 1169
AgsI TTSAA 3 cut(s) 142, 581, 914
AjiI CACGTC 2 cut(s) 209, 715
AjnI CCWGG 1 cut(s) 1162
AjuI GAANNNNNNNTTGG 2 cut(s) 77, 109
AluBI AGCT 3 cut(s) 214, 407, 1114
AluI AGCT 3 cut(s) 214, 407, 1114
Alw26I GTCTC 1 cut(s) 129
AlwI GGATC 2 cut(s) 552, 565
Ama87I CYCGRG 1 cut(s) 132
ApeKI GCWGC 1 cut(s) 467
ApoI RAATTY 2 cut(s) 724, 976
ArsI GACNNNNNNTTYG 2 cut(s) 755, 787
AseI ATTAAT 1 cut(s) 1092
Asp700I GAANNNNTTC 2 cut(s) 909, 1154
AspLEI GCGC 2 cut(s) 529, 875
AspS9I GGNCC 2 cut(s) 354, 456
AsuHPI GGTGA 3 cut(s) 32, 866, 1022
AvaI CYCGRG 1 cut(s) 132
AvaII GGWCC 2 cut(s) 354, 456
BalI TGGCCA 1 cut(s) 795
BamHI GGATCC 1 cut(s) 557
BbvI GCAGC 1 cut(s) 454
BccI CCATC 5 cut(s) 275, 527, 785, 935, 1046
BceAI ACGGC 2 cut(s) 163, 296
BciT130I CCWGG 1 cut(s) 1164
BclI TGATCA 1 cut(s) 379
BcoDI GTCTC 1 cut(s) 129
BfaI CTAG 1 cut(s) 971
BfoI RGCGCY 1 cut(s) 530
BisI GCNGC 2 cut(s) 468, 946
BlpI GCTNAGC 1 cut(s) 494
BlsI GCNGC 2 cut(s) 469, 947
Bme1390I CCNGG 1 cut(s) 1164
Bme18I GGWCC 2 cut(s) 354, 456
BmeT110I CYCGRG 1 cut(s) 132
BmgBI CACGTC 2 cut(s) 209, 715
BmgT120I GGNCC 2 cut(s) 354, 456
BmiI GGNNCC 3 cut(s) 457, 458, 559
BmrFI CCNGG 1 cut(s) 1164
BmsI GCATC 1 cut(s) 790
BpmI CTGGAG 1 cut(s) 1185
Bpu1102I GCTNAGC 1 cut(s) 494
BsaHI GRCGYC 1 cut(s) 858
BsaJI CCNNGG 4 cut(s) 6, 501, 1074, 1162
Bsc4I CCNNNNNNNGG 4 cut(s) 506, 1040, 1075, 1169
Bse1I ACTGG 1 cut(s) 856
BseBI CCWGG 1 cut(s) 1164
BseDI CCNNGG 4 cut(s) 6, 501, 1074, 1162
BseGI GGATG 6 cut(s) 16, 103, 538, 707, 793, 1084
BseLI CCNNNNNNNGG 4 cut(s) 506, 1040, 1075, 1169
BseMII CTCAG 1 cut(s) 314
BseNI ACTGG 1 cut(s) 856
BseRI GAGGAG 1 cut(s) 344
BseX3I CGGCCG 1 cut(s) 309
BseXI GCAGC 1 cut(s) 454
BseYI CCCAGC 1 cut(s) 452
Bsh1236I CGCG 1 cut(s) 875
Bsh1285I CGRYCG 1 cut(s) 312
BsiEI CGRYCG 1 cut(s) 312
BsiHKCI CYCGRG 1 cut(s) 132
BsiSI CCGG 3 cut(s) 236, 357, 530
BslFI GGGAC 1 cut(s) 469
BslI CCNNNNNNNGG 4 cut(s) 506, 1040, 1075, 1169
BsmAI GTCTC 1 cut(s) 129
BsmFI GGGAC 1 cut(s) 469
BsoBI CYCGRG 1 cut(s) 132
Bsp143I GATC 4 cut(s) 37, 379, 557, 928
Bsp1720I GCTNAGC 1 cut(s) 494
BspACI CCGC 2 cut(s) 875, 946
BspCNI CTCAG 1 cut(s) 313
BspFNI CGCG 1 cut(s) 875
BspHI TCATGA 1 cut(s) 426
BspLI GGNNCC 3 cut(s) 457, 458, 559
BspPI GGATC 2 cut(s) 552, 565
BspQI GCTCTTC 2 cut(s) 1104, 1180
BsrI ACTGG 1 cut(s) 856
BssECI CCNNGG 4 cut(s) 6, 501, 1074, 1162
BssMI GATC 4 cut(s) 37, 379, 557, 928
BssNI GRCGYC 1 cut(s) 858
BssT1I CCWWGG 2 cut(s) 6, 501
Bst2UI CCWGG 1 cut(s) 1164
Bst4CI ACNGT 1 cut(s) 163
Bst6I CTCTTC 3 cut(s) 640, 1104, 1180
BstACI GRCGYC 1 cut(s) 858
BstDEI CTNAG 3 cut(s) 300, 494, 1060
BstDSI CCRYGG 1 cut(s) 1074
BstF5I GGATG 6 cut(s) 16, 103, 538, 707, 793, 1084
BstFNI CGCG 1 cut(s) 875
BstH2I RGCGCY 1 cut(s) 530
BstHHI GCGC 2 cut(s) 529, 875
BstKTI GATC 4 cut(s) 40, 382, 560, 931
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 4 cut(s) 37, 379, 557, 928
BstMCI CGRYCG 1 cut(s) 312
BstMWI GCNNNNNNNGC 1 cut(s) 881
BstNI CCWGG 1 cut(s) 1164
BstSCI CCNGG 1 cut(s) 1162
BstUI CGCG 1 cut(s) 875
BstV1I GCAGC 1 cut(s) 454
BstX2I RGATCY 1 cut(s) 557
BstYI RGATCY 1 cut(s) 557
BstZI CGGCCG 1 cut(s) 309
BtgI CCRYGG 1 cut(s) 1074
BtrI CACGTC 2 cut(s) 209, 715
BtsCI GGATG 6 cut(s) 16, 103, 538, 707, 793, 1084
BtsIMutI CAGTG 1 cut(s) 308
CciI TCATGA 1 cut(s) 426
CfoI GCGC 2 cut(s) 529, 875
Cfr13I GGNCC 2 cut(s) 354, 456
CseI GACGC 1 cut(s) 866
Csp6I GTAC 2 cut(s) 159, 1097
CspCI CAANNNNNGTGG 4 cut(s) 392, 427, 1063, 1098
CviAII CATG 3 cut(s) 273, 427, 997
CviQI GTAC 2 cut(s) 159, 1097
DdeI CTNAG 3 cut(s) 300, 494, 1060
DpnI GATC 4 cut(s) 39, 381, 559, 930
DpnII GATC 4 cut(s) 37, 379, 557, 928
EaeI YGGCCR 7 cut(s) 309, 793, 807, 843, 943, 1042, 1102
EagI CGGCCG 1 cut(s) 309
Eam1104I CTCTTC 3 cut(s) 640, 1104, 1180
EarI CTCTTC 3 cut(s) 640, 1104, 1180
EclXI CGGCCG 1 cut(s) 309
Eco130I CCWWGG 2 cut(s) 6, 501
Eco47I GGWCC 2 cut(s) 354, 456
Eco52I CGGCCG 1 cut(s) 309
Eco57I CTGAAG 1 cut(s) 621
Eco88I CYCGRG 1 cut(s) 132
EcoO109I RGGNCCY 1 cut(s) 456
EcoRI GAATTC 1 cut(s) 724
EcoRII CCWGG 1 cut(s) 1162
EcoT14I CCWWGG 2 cut(s) 6, 501
ErhI CCWWGG 2 cut(s) 6, 501
FaeI CATG 3 cut(s) 276, 430, 1000
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 1 cut(s) 469
FatI CATG 3 cut(s) 272, 426, 996
FauNDI CATATG 1 cut(s) 23
FbaI TGATCA 1 cut(s) 379
FblI GTMKAC 1 cut(s) 416
Fnu4HI GCNGC 2 cut(s) 468, 946
FokI GGATG 6 cut(s) 23, 110, 545, 694, 800, 1091
Fsp4HI GCNGC 2 cut(s) 468, 946
FspBI CTAG 1 cut(s) 971
GlaI GCGC 2 cut(s) 528, 874
GluI GCNGC 2 cut(s) 468, 946
GsaI CCCAGC 1 cut(s) 456
GsuI CTGGAG 1 cut(s) 1185
HaeII RGCGCY 1 cut(s) 530
HapII CCGG 3 cut(s) 236, 357, 530
HgaI GACGC 1 cut(s) 866
HhaI GCGC 2 cut(s) 529, 875
Hin1I GRCGYC 1 cut(s) 858
Hin1II CATG 3 cut(s) 276, 430, 1000
Hin6I GCGC 2 cut(s) 527, 873
HinP1I GCGC 2 cut(s) 527, 873
HincII GTYRAC 1 cut(s) 417
HindII GTYRAC 1 cut(s) 417
HindIII AAGCTT 1 cut(s) 405
HinfI GANTC 5 cut(s) 103, 127, 878, 1021, 1143
HpaII CCGG 3 cut(s) 236, 357, 530
HphI GGTGA 3 cut(s) 32, 866, 1022
Hpy166II GTNNAC 3 cut(s) 288, 417, 605
Hpy188I TCNGA 8 cut(s) 126, 486, 595, 712, 829, 904, 919, 1140
Hpy188III TCNNGA 7 cut(s) 134, 255, 377, 427, 639, 932, 1147
Hpy8I GTNNAC 3 cut(s) 288, 417, 605
Hpy99I CGWCG 2 cut(s) 716, 745
HpyAV CCTTC 6 cut(s) 54, 409, 500, 626, 887, 1080
HpyCH4III ACNGT 1 cut(s) 163
HpyCH4IV ACGT 5 cut(s) 208, 463, 658, 714, 824
HpyCH4V TGCA 3 cut(s) 206, 470, 1055
HpyF10VI GCNNNNNNNGC 1 cut(s) 881
HpyF3I CTNAG 3 cut(s) 300, 494, 1060
HpySE526I ACGT 5 cut(s) 208, 463, 658, 714, 824
Hsp92I GRCGYC 1 cut(s) 858
Hsp92II CATG 3 cut(s) 276, 430, 1000
HspAI GCGC 2 cut(s) 527, 873
KflI GGGWCCC 1 cut(s) 456
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 4 cut(s) 37, 379, 557, 928
LguI GCTCTTC 2 cut(s) 1104, 1180
LmnI GCTCC 1 cut(s) 331
LpnPI CCDG 9 cut(s) 249, 370, 390, 438, 543, 624, 837, 1149, 1176
Lsp1109I GCAGC 1 cut(s) 454
LweI GCATC 1 cut(s) 790
MaeI CTAG 1 cut(s) 971
MaeII ACGT 5 cut(s) 208, 463, 658, 714, 824
MaeIII GTNAC 5 cut(s) 26, 317, 730, 854, 1118
MalI GATC 4 cut(s) 39, 381, 559, 930
MboI GATC 4 cut(s) 37, 379, 557, 928
MflI RGATCY 1 cut(s) 557
MlsI TGGCCA 1 cut(s) 795
MluCI AATT 9 cut(s) 86, 142, 196, 335, 724, 831, 976, 1050, 1089
MluNI TGGCCA 1 cut(s) 795
MlyI GAGTC 1 cut(s) 872
MmeI TCCRAC 2 cut(s) 735, 1151
Mox20I TGGCCA 1 cut(s) 795
MroXI GAANNNNTTC 2 cut(s) 909, 1154
MscI TGGCCA 1 cut(s) 795
MseI TTAA 2 cut(s) 248, 1092
Msp20I TGGCCA 1 cut(s) 795
MspI CCGG 3 cut(s) 236, 357, 530
MspR9I CCNGG 1 cut(s) 1164
MvaI CCWGG 1 cut(s) 1164
MvnI CGCG 1 cut(s) 875
MwoI GCNNNNNNNGC 1 cut(s) 881
NdeI CATATG 1 cut(s) 23
NdeII GATC 4 cut(s) 37, 379, 557, 928
NlaIII CATG 3 cut(s) 276, 430, 1000
NlaIV GGNNCC 3 cut(s) 457, 458, 559
NmeAIII GCCGAG 3 cut(s) 59, 860, 1130
NmuCI GTSAC 2 cut(s) 730, 854
PaeR7I CTCGAG 1 cut(s) 132
PagI TCATGA 1 cut(s) 426
PciSI GCTCTTC 2 cut(s) 1104, 1180
PdmI GAANNNNTTC 2 cut(s) 909, 1154
PfeI GAWTC 4 cut(s) 103, 127, 1021, 1143
PkrI GCNGC 2 cut(s) 469, 947
PleI GAGTC 1 cut(s) 872
PpsI GAGTC 1 cut(s) 872
PpuMI RGGWCCY 1 cut(s) 456
PshBI ATTAAT 1 cut(s) 1092
Psp5II RGGWCCY 1 cut(s) 456
Psp6I CCWGG 1 cut(s) 1162
PspFI CCCAGC 1 cut(s) 452
PspGI CCWGG 1 cut(s) 1162
PspN4I GGNNCC 3 cut(s) 457, 458, 559
PspPI GGNCC 2 cut(s) 354, 456
PspPPI RGGWCCY 1 cut(s) 456
PsuI RGATCY 1 cut(s) 557
RsaI GTAC 2 cut(s) 160, 1098
RsaNI GTAC 2 cut(s) 159, 1097
SalI GTCGAC 1 cut(s) 415
SapI GCTCTTC 2 cut(s) 1104, 1180
SaqAI TTAA 2 cut(s) 248, 1092
SatI GCNGC 2 cut(s) 468, 946
Sau3AI GATC 4 cut(s) 37, 379, 557, 928
Sau96I GGNCC 2 cut(s) 354, 456
SchI GAGTC 1 cut(s) 872
ScrFI CCNGG 1 cut(s) 1164
SfaNI GCATC 1 cut(s) 790
Sfr274I CTCGAG 1 cut(s) 132
SinI GGWCC 2 cut(s) 354, 456
SlaI CTCGAG 1 cut(s) 132
SmlI CTYRAG 1 cut(s) 132
SmoI CTYRAG 1 cut(s) 132
Sse9I AATT 9 cut(s) 86, 142, 196, 335, 724, 831, 976, 1050, 1089
SsiI CCGC 2 cut(s) 875, 946
SspMI CTAG 1 cut(s) 971
StyD4I CCNGG 1 cut(s) 1162
StyI CCWWGG 2 cut(s) 6, 501
TaaI ACNGT 1 cut(s) 163
TaiI ACGT 5 cut(s) 211, 466, 661, 717, 827
TaqI TCGA 5 cut(s) 133, 416, 650, 1148, 1158
TaqII GACCGA 1 cut(s) 718
TasI AATT 9 cut(s) 86, 142, 196, 335, 724, 831, 976, 1050, 1089
TatI WGTACW 1 cut(s) 1096
TauI GCSGC 1 cut(s) 948
TfiI GAWTC 4 cut(s) 103, 127, 1021, 1143
Tru1I TTAA 2 cut(s) 248, 1092
Tru9I TTAA 2 cut(s) 248, 1092
TscAI CASTG 1 cut(s) 308
TseFI GTSAC 2 cut(s) 730, 854
TseI GCWGC 1 cut(s) 467
Tsp45I GTSAC 2 cut(s) 730, 854
TspDTI ATGAA 2 cut(s) 211, 443
TspGWI ACGGA 2 cut(s) 758, 1091
TspRI CASTG 1 cut(s) 308
VpaK11BI GGWCC 2 cut(s) 354, 456
VspI ATTAAT 1 cut(s) 1092
XapI RAATTY 2 cut(s) 724, 976
XhoI CTCGAG 1 cut(s) 132
XmiI GTMKAC 1 cut(s) 416
XmnI GAANNNNTTC 2 cut(s) 909, 1154
XspI CTAG 1 cut(s) 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.