Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000063

Physical Location & Seq

Genomic Coordinates Forward (+)

70350950 .. 70355253

Gene Structure 4304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG503800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

ATGGCCGATGATACATCAGAAACCGAAACGGGGCTAGAGGACAACGAAGCAACAAAAGCACAATTGGCTGTAATGAAAGCACAATTGGCCGGATTCTCAACCAAGTTTGAAGCTGCTTTTAGTGCTTCTGTGGACAAACTCCAAAGCTCTGTGATATGCCAGTTGGCAAAGAACAAGGAACCGCGAAGAGAGTGCATATTAGGACCACATTACAGCTTCGGTATGCCGCCGGCCATCAACGAGATTCTAGAAAACTCATTGGTGGACACATCTTGCTTGACCGGCGGAGCTAGCTGGTCTAGTTGGAACACAAATTCCAAACAACCAGGGAGTTGGCCGAAATCGACACCCGAGTGGAAGAAATGGGTACCACGGATGGAGCACTTTTTCGGCCGTTCATGGAAAAAGTTTGGTATTTATGATAGCATTAAAATGTCCGAGCAAGAAATCTACATGGACCGGCCTCTTCTTGCTGCTGCCTTGTGTTTTTGGTCATCTGCTACTAACACCATGAACCTGCCACTTGGGCCAATGAGTCCAACCTTGCTAGATATGGCTGCAATATTTGGTTTTCGGCCGAATGGAGAGGAGATATGTGCCTTAGCTGACCTTCCTTCCTATTTTCATGCTAGCCTGAAACCCAAAGTGAACAACGATGACAAGAAAGCAAAACAAAAAACTGATGTCAAAGCAAGGAAGTTGCTTAATTATAGCACTTTCTATGCCGAACATGCAATTGCCGAGGATGTGTCGACGGTTGAGAGGCATAACCCAAAACAACATGAGCACGCCGCTTTCCTCCTCTATTGGTTATGCAAGTATGTATTTTGCACCAAGTCGAACAAGTGTTTGTTCGAGTTTTCTGGTATTGCGGAGGCCCTTAGCTTGGATAAACCTTTAGCCCTTGGTCCATTTGTCCTTGCCTATCTTTACCGTACTTTGCGTAATGTAGTGACCAACAATATGACACTGGATGTTGGAGGGCCATTATGGATGTTCCAAGTATGGGTGCAAACTTACTTTCGTCAGCTTCGACCAAGTCATCCTTTTGATTCCACTGTGATTCTTGGCCGCCAGATCATCTCTCTTGGTCCTCATGCACATTCGGTAGCAGAGTGCTTTGCTTTCTTCCTTTTGAAAAAGAGCATGGCCAATGAAGAGTTTGCCATATGTTATAGCCGAGATTATCCTTCTTGTCTTGCATTAAACATAACGAAGCCATGGGAGAGGTCTTTGGACTTGTTAGTACTTCTACCTTGGGGGAGCATTCTGATTTCTCGAGACATAAACTATGGTCTCAAGGGTACACTGGGTCGGCCAGGGGTTGAGGTTTATCTTCCAAACTTTGTTGCGCGTCAGCTTGGCTTCATACAAAGTTGTCCAGCCTTCTTTCTAATGTCCCGGAATCGTTTTTCTTCATGGAGATGTGGGTTTACAGACACTGCGCATTGTTCGGCCGTCACTCTTTATTATCAGACTCAGTTTGGCAATTTTGAGAGATCCGACCTGAGCGCCCGCGAACCTGATCATAGAGAAACTCCGACTTTCCAAGCTTGGTGGTCAACATTTATCAAGAAGAAACTTGGAGAGGACTTGCGGTCAACCGAGCGTATTGCCTTGTATGGATTCCCGGGCTTGTTCACCAACAAAGGCAATGGCAAGAAGAAAGCACCGGTTGCCAAGTCGAAATCCAAAGAAATGTCCAAGGAAGAGCAAACCTCAAAGAAACGAGGATCAAAGTCGGGAAGAGCTTTGCCTACCAAGAAGGTAAAGAAGTCACCTGACGTGGTGGAGAGTTCGGTCACGAATCTGGCCGACATTATGGTTAGTGAAGACATAATTTTCGAGGGTGATATGGATAATAGCCAAAATGCTCTAGCTGAAAATCACATCATGTCTGGAGCTGAGGATGCGGCCGAAACTAGTGATGCCTCAACCAACAACACGGGCTCGGCCGACAGTGAAGGTTCGCCTGATGAAGCACAGTCAGAAAACTTTGAACATGAGGGAGATGGCCGTATTGATCACTCTTTGCCTCCTCCTGAGAGTTCCATGGTTGAGATTGACATGGATGACTTGGGTGAGAACCAACTTCTTAATATCGACCAACAACTCGCAAACTCAGTCAACCTTGCTAAGGATGCGGAAGACATCGGTGTACTTGGCCGAGAGGCATTGCTTAACCACCAAATACCTGTCCAGGTACGAGAATCTCGAAGCAGTTCAACCTTGGAGTTGGCTCTTCTCAACCCAACTGAACCAACTCCCTCTATGTTCGGAATGCTTACCTCTCCTCCTACTGAAGGGATACCTCGAAGTGATCAAGCTATCGTTTGCGCCTCATCATCGGCTGAGCCTGTGGACCAAACAACAGGTGATCTTGGTTTGGAGTTACTTCAGTTTCTCGATACGCTAGACAACAACGCGAGCCCGGTAGAGGAAAAGCTTGAAACAAACGAAACCAAGGCACTTGAATCGGTCAGACAGTTTTTGGGTTGTGATACGAGAGCAGTAACCGAGACTAGTTTCCTCACCTTCAAGGAGGCGGTTGAAGTACTTATTTCAGCCAACCACTTATCTCAGGTAGAAGCTTATGAAGTTCATGCTCGTTTGGCTGTTGTGAAATATAGTCTTTCTCCTTGTCTAGAGGCCCAAAAAGAGTTTGAAGCCGGTGAAAAGTTGAAAAGTGAGTATGAAGACATTCGCCAGTCTACCGATCTTGGCCAACTCCACGAGTTGAAGACTTCTTTGGACAAGGGAAGGCAAAAAGTGCTTGATTTGAAAAAGCAGCTAACCGAAGCTGAAGAACAAGTCAAAGCCACTTTGGCCACCATCCGAACCATTGTTCCCCAACAAAATCTTAGCAGGTATAGCTCGATTTTGTCATCGGTCAAGTCGTATAACAAAAGAAGAGATATCCTGAAGCGAAAGGTCGATCAAGGTATGCAAGACTTGAAAAATGTCAAGGAAGTTCTTCGGTCTCTTCTACCCTCGGACATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001525 GO:0001568 GO:0001944 GO:0002155 GO:0002254 GO:0002353 GO:0002526 GO:0003008 GO:0003013 GO:0003073 GO:0003085 GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0008015 GO:0008150 GO:0008152 GO:0008217 GO:0008233 GO:0008238 GO:0008239 GO:0009611 GO:0009653 GO:0009966 GO:0010594 GO:0010632 GO:0010646 GO:0016787 GO:0019222 GO:0019538 GO:0023051 GO:0030334 GO:0031323 GO:0032501 GO:0032502 GO:0032879 GO:0033500 GO:0035239 GO:0035295 GO:0040012 GO:0042060 GO:0042592 GO:0042593 GO:0043170 GO:0043535 GO:0044238 GO:0044464 GO:0045178 GO:0045776 GO:0048514 GO:0048583 GO:0048646 GO:0048731 GO:0048856 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051239 GO:0051270 GO:0060055 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0072358 GO:0072359 GO:0072376 GO:0097009 GO:0140096 GO:1901564 GO:2000145 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04614 ko04974 map04614 map04974

Pfam Domains

Protein Families

Peptidase_S28

Protein Analysis

1000

Amino Acids

111.6

Weight (kDa)

5.64

Isoelectric Point (pI)

45.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMD	PF10536	138 - 520	1.2e-40	Plant mobile domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000063)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21382 FvH4_1g29794 FvH4_1g29795 FvH4_2g35573 FvH4_2g35574 FvH4_4g18552 FvH4_5g16044
malus_domestica	MD05G1017000.v1.1
prunus_persica	Prupe.3G140800_v2.0.a1 Prupe.6G164100_v2.0.a1
pyrus_communis	pycom01g04330 pycom03g19820 pycom04g06720 pycom06g11360 pycom06g19000 pycom10g08100 pycom13g16660 pycom13g27590 pycom13g27640 pycom13g27890 pycom16g11770 pycom16g19530
rosa_chinensis	RchiOBHm_Chr1g0317341 RchiOBHm_Chr1g0317351 RchiOBHm_Chr1g0320431 RchiOBHm_Chr1g0320711 RchiOBHm_Chr1g0320721 RchiOBHm_Chr1g0321611 RchiOBHm_Chr1g0321621 RchiOBHm_Chr1g0321631 RchiOBHm_Chr1g0323651 RchiOBHm_Chr1g0332991 RchiOBHm_Chr1g0333001 RchiOBHm_Chr1g0335981 RchiOBHm_Chr1g0335991 RchiOBHm_Chr1g0336001 RchiOBHm_Chr1g0350201 RchiOBHm_Chr1g0368201 RchiOBHm_Chr2g0105531 RchiOBHm_Chr2g0105541 RchiOBHm_Chr2g0116571 RchiOBHm_Chr2g0116581 RchiOBHm_Chr2g0121071 RchiOBHm_Chr2g0131351 RchiOBHm_Chr2g0131661 RchiOBHm_Chr2g0133021 RchiOBHm_Chr2g0138181 RchiOBHm_Chr2g0138191 RchiOBHm_Chr2g0142701 RchiOBHm_Chr2g0142711 RchiOBHm_Chr2g0152981 RchiOBHm_Chr3g0456181 RchiOBHm_Chr3g0456191 RchiOBHm_Chr3g0493631 RchiOBHm_Chr3g0496201 RchiOBHm_Chr4g0401541 RchiOBHm_Chr4g0410311 RchiOBHm_Chr4g0410321 RchiOBHm_Chr4g0419231 RchiOBHm_Chr4g0419511 RchiOBHm_Chr4g0419521 RchiOBHm_Chr5g0004311 RchiOBHm_Chr5g0004321 RchiOBHm_Chr5g0038131 RchiOBHm_Chr5g0038251 RchiOBHm_Chr5g0038261 RchiOBHm_Chr5g0038271 RchiOBHm_Chr5g0052241 RchiOBHm_Chr5g0053911 RchiOBHm_Chr5g0074641 RchiOBHm_Chr5g0076651 RchiOBHm_Chr5g0076661 RchiOBHm_Chr6g0249161 RchiOBHm_Chr6g0249171 RchiOBHm_Chr6g0250961 RchiOBHm_Chr6g0253701 RchiOBHm_Chr6g0262131 RchiOBHm_Chr6g0263181 RchiOBHm_Chr6g0263231 RchiOBHm_Chr6g0263241 RchiOBHm_Chr6g0263251 RchiOBHm_Chr6g0291271 RchiOBHm_Chr7g0194611 RchiOBHm_Chr7g0219691 RchiOBHm_Chr7g0219701 RchiOBHm_Chr7g0225431 RchiOBHm_Chr7g0234221 RchiOBHm_Chr7g0238711 RchiOBHm_Chr7g0238721 RchiOBHm_Chr7g0238731 RchiOBHm_Chr7g0239611 RchiOBHm_Chr7g0239621
rosa_laevigata	RLG00000001361 RLG00000001376 RLG00000001860 RLG00000002051 RLG00000002362 RLG00000008940 RLG00000012764 RLG00000018782 RLG00000029639 RLG00000030151
rosa_multiflora	Rmu_co8090794.1_g000001 Rmu_co8135356.1_g000001 Rmu_co8224968.1_g000001 Rmu_sc0000016.1_g000020 Rmu_sc0000029.1_g000061 Rmu_sc0000035.1_g000032 Rmu_sc0000060.1_g000041 Rmu_sc0000148.1_g000041 Rmu_sc0000315.1_g000084 Rmu_sc0000527.1_g000005 Rmu_sc0000527.1_g000007 Rmu_sc0000527.1_g000008 Rmu_sc0000648.1_g000002 Rmu_sc0000762.1_g000076 Rmu_sc0000870.1_g000003 Rmu_sc0000870.1_g000004 Rmu_sc0000948.1_g000037 Rmu_sc0000997.1_g000003 Rmu_sc0001047.1_g000041 Rmu_sc0001047.1_g000042 Rmu_sc0001075.1_g000044 Rmu_sc0001174.1_g000006 Rmu_sc0001235.1_g000025 Rmu_sc0001292.1_g000008 Rmu_sc0001301.1_g000038 Rmu_sc0001461.1_g000069 Rmu_sc0001461.1_g000070 Rmu_sc0001669.1_g000041 Rmu_sc0001689.1_g000027 Rmu_sc0001896.1_g000008 Rmu_sc0001909.1_g000013 Rmu_sc0002170.1_g000038 Rmu_sc0002200.1_g000014 Rmu_sc0002283.1_g000027 Rmu_sc0002284.1_g000014 Rmu_sc0002294.1_g000017 Rmu_sc0002294.1_g000018 Rmu_sc0002307.1_g000020 Rmu_sc0002307.1_g000021 Rmu_sc0002307.1_g000023 Rmu_sc0002357.1_g000054 Rmu_sc0002409.1_g000005 Rmu_sc0002535.1_g000002 Rmu_sc0002589.1_g000014 Rmu_sc0002759.1_g000016 Rmu_sc0002759.1_g000017 Rmu_sc0002777.1_g000015 Rmu_sc0002824.1_g000016 Rmu_sc0002872.1_g000005 Rmu_sc0002872.1_g000012 Rmu_sc0002872.1_g000013 Rmu_sc0002942.1_g000019 Rmu_sc0003337.1_g000001 Rmu_sc0003410.1_g000052 Rmu_sc0003445.1_g000010 Rmu_sc0003773.1_g000007 Rmu_sc0003773.1_g000008 Rmu_sc0003895.1_g000002 Rmu_sc0004063.1_g000006 Rmu_sc0004088.1_g000009 Rmu_sc0004088.1_g000010 Rmu_sc0004174.1_g000027 Rmu_sc0004196.1_g000010 Rmu_sc0004515.1_g000006 Rmu_sc0004727.1_g000010 Rmu_sc0004755.1_g000018 Rmu_sc0005016.1_g000030 Rmu_sc0005026.1_g000001 Rmu_sc0005044.1_g000007 Rmu_sc0005284.1_g000001 Rmu_sc0005431.1_g000030 Rmu_sc0005802.1_g000014 Rmu_sc0005802.1_g000015 Rmu_sc0005994.1_g000004 Rmu_sc0005994.1_g000005 Rmu_sc0006059.1_g000048 Rmu_sc0006583.1_g000013 Rmu_sc0006824.1_g000009 Rmu_sc0007458.1_g000005 Rmu_sc0007707.1_g000002 Rmu_sc0008242.1_g000012 Rmu_sc0008713.1_g000006 Rmu_sc0008770.1_g000008 Rmu_sc0009785.1_g000004 Rmu_sc0009785.1_g000005 Rmu_sc0010125.1_g000001 Rmu_sc0010211.1_g000004 Rmu_sc0011034.1_g000001 Rmu_sc0011833.1_g000006 Rmu_sc0014851.1_g000001 Rmu_sc0014899.1_g000001 Rmu_sc0015060.1_g000003 Rmu_sc0015186.1_g000001 Rmu_sc0015248.1_g000003 Rmu_sc0015248.1_g000004 Rmu_sc0015314.1_g000001 Rmu_sc0018098.1_g000002 Rmu_sc0022706.1_g000004 Rmu_sc0023350.1_g000002 Rmu_sc0027636.1_g000001 Rmu_sc0027672.1_g000003 Rmu_sc0030879.1_g000001 Rmu_ssc0000008.1_g000029 Rmu_ssc0000019.1_g000014 Rmu_ssc0000050.1_g000082 Rmu_ssc0000282.1_g000004 Rmu_ssc0000311.1_g000010
rosa_roxburghii	Rroxscaffold_1G00015190 Rroxscaffold_1G00031880 Rroxscaffold_1G00031890 Rroxscaffold_1G00059310 Rroxscaffold_1G00060420 Rroxscaffold_1G00067930 Rroxscaffold_1G00075030 Rroxscaffold_2G00082210 Rroxscaffold_2G00122970 Rroxscaffold_3G00218230 Rroxscaffold_3G00219020 Rroxscaffold_3G00219030 Rroxscaffold_3G00223680 Rroxscaffold_3G00223690 Rroxscaffold_3G00223700 Rroxscaffold_3G00226870 Rroxscaffold_3G00226880 Rroxscaffold_3G00232990 Rroxscaffold_3G00265610 Rroxscaffold_3G00265620 Rroxscaffold_3G00265630 Rroxscaffold_4G00318660 Rroxscaffold_4G00319060 Rroxscaffold_4G00323500 Rroxscaffold_5G00357520 Rroxscaffold_5G00366150 Rroxscaffold_5G00377470 Rroxscaffold_6G00395700 Rroxscaffold_6G00413950 Rroxscaffold_7G00187650 Rroxscaffold_7G00198290 Rroxscaffold_7G00198300 Rroxscaffold_7G00208060
rosa_rugosa	Rorug01G0173900 Rorug01G0174000 Rorug01G0174100 Rorug01G0174100 Rorug02G0341200 Rorug04G0135700 Rorug04G0135800 Rorug05G0032500 Rorug06G0021800
rosa_samantha	Rh1AG036600 Rh1AG245800 Rh1CG021700 Rh1CG021800 Rh1CG085800 Rh1CG085900 Rh1CG187900 Rh1CG229600 Rh1CG239600 Rh1CG246500 Rh1CG246600 Rh2BG478100 Rh2DG341300 Rh2DG366600 Rh2DG375700 Rh2DG384300 Rh2DG487000 Rh2DG504000 Rh2DG504100 Rh3AG311800 Rh3AG327500 Rh3AG328300 Rh3BG345100 Rh3CG320100 Rh4AG005700 Rh4AG067900 Rh4AG068000 Rh4AG084400 Rh4AG106700 Rh4AG160000 Rh4AG173900 Rh4AG174000 Rh4CG125300 Rh4CG125500 Rh4CG264500 Rh4DG110800 Rh5AG047300 Rh5AG085200 Rh5AG126300 Rh5AG127300 Rh5AG203000 Rh5AG332400 Rh5AG332500 Rh5AG342400 Rh5AG344100 Rh5AG375600 Rh5AG378300 Rh5AG386000 Rh5AG529600 Rh5BG125200 Rh5CG137600 Rh5CG137700 Rh5DG125200 Rh6BG134100 Rh6BG175400 Rh6BG179500 Rh6BG179600 Rh6BG181600 Rh6BG181700 Rh6BG191100 Rh6BG232900 Rh6BG259700 Rh6BG259800 Rh7AG028000 Rh7AG319400 Rh7AG352700 Rh7AG352800 Rh7AG352900 Rh7AG482500 Rh7AG482600 Rh7AG503800 Rh7BG334700 Rh7CG200100 Rh7CG336200 Rh7CG370200 Rh7CG370400 Rh7CG370500
rosa_wichuraiana	Rw1G001580 Rw1G003570 Rw1G004260 Rw1G004270 Rw1G021170 Rw2G019390 Rw2G040280 Rw2G044050 Rw4G004430 Rw5G010950 Rw5G018350 Rw5G032890 Rw6G002840 Rw6G006510 Rw6G007780 Rw6G033790 Rw7G036320 Rw7G040550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1446
Acc36I	ACCTGC	2 cut(s)	525, 2856
Acc65I	GGTACC	1 cut(s)	367
AccB1I	GGYRCC	1 cut(s)	367
AccI	GTMKAC	2 cut(s)	752, 2711
AccII	CGCG	4 cut(s)	184, 1354, 1518, 2426
AclWI	GGATC	2 cut(s)	1494, 1741
AcsI	RAATTY	1 cut(s)	313
AcuI	CTGAAG	4 cut(s)	2322, 2381, 2823, 2942
AfaI	GTAC	7 cut(s)	369, 937, 1248, 1306, 2160, 2205, 2556
AfiI	CCNNNNNNNGG	6 cut(s)	30, 886, 1006, 2137, 2303, 2437
AflIII	ACRYGT	1 cut(s)	2997
AgeI	ACCGGT	1 cut(s)	1672
AhdI	GACNNNNNGTC	1 cut(s)	1597
AhlI	ACTAGT	2 cut(s)	1922, 2522
AjiI	CACGTC	1 cut(s)	1786
AjnI	CCWGG	3 cut(s)	325, 1318, 2199
AjuI	GAANNNNNNNTTGG	4 cut(s)	68, 100, 2732, 2764
AleI	CACNNNNGTG	1 cut(s)	352
AloI	GAACNNNNNNTCC	4 cut(s)	299, 331, 2830, 2862
Alw21I	GWGCWC	2 cut(s)	384, 789
Alw26I	GTCTC	4 cut(s)	1275, 1301, 2513, 2985
AlwI	GGATC	2 cut(s)	1494, 1741
AlwNI	CAGNNNCTG	1 cut(s)	1442
Ama87I	CYCGRG	3 cut(s)	350, 1278, 1630
ApeKI	GCWGC	5 cut(s)	113, 473, 476, 557, 2788
ApoI	RAATTY	1 cut(s)	313
ArsI	GACNNNNNNTTYG	2 cut(s)	1826, 1858
AsiGI	ACCGGT	1 cut(s)	1672
Asp700I	GAANNNNTTC	3 cut(s)	2221, 2700, 2973
Asp718I	GGTACC	1 cut(s)	367
AspLEI	GCGC	4 cut(s)	1354, 1447, 1514, 2339
AspS9I	GGNCC	9 cut(s)	203, 457, 527, 877, 908, 983, 1091, 2362, 2650
AsuC2I	CCSGG	4 cut(s)	1402, 1631, 1632, 2432
AsuHPI	GGTGA	7 cut(s)	1633, 1770, 1862, 2093, 2387, 2524, 2684
AsuNHI	GCTAGC	2 cut(s)	290, 629
AvaI	CYCGRG	3 cut(s)	350, 1278, 1630
AvaII	GGWCC	5 cut(s)	203, 457, 908, 1091, 2362
BalI	TGGCCA	3 cut(s)	1151, 2724, 2828
BanI	GGYRCC	1 cut(s)	367
BanII	GRGCYC	2 cut(s)	1952, 2432
BauI	CACGAG	1 cut(s)	2732
BbsI	GAAGAC	4 cut(s)	1839, 2154, 2703, 2747
Bbv12I	GWGCWC	2 cut(s)	384, 789
BbvCI	CCTCAGC	1 cut(s)	1905
BbvI	GCAGC	5 cut(s)	100, 460, 463, 544, 2800
BccI	CCATC	4 cut(s)	242, 370, 2006, 2840
BceAI	ACGGC	3 cut(s)	378, 1442, 2001
BcgI	CGANNNNNNTGC	6 cut(s)	174, 208, 1595, 1629, 2457, 2491
BciT130I	CCWGG	3 cut(s)	327, 1320, 2201
BciVI	GTATCC	1 cut(s)	2301
BclI	TGATCA	3 cut(s)	1525, 2023, 2320
BcnI	CCSGG	4 cut(s)	1402, 1631, 1632, 2432
BcoDI	GTCTC	4 cut(s)	1275, 1301, 2513, 2985
BcuI	ACTAGT	2 cut(s)	1922, 2522
BfoI	RGCGCY	1 cut(s)	1515
BfuAI	ACCTGC	2 cut(s)	525, 2856
BfuI	GTATCC	1 cut(s)	2301
BglI	GCCNNNNNGGC	2 cut(s)	526, 2825
BisI	GCNGC	9 cut(s)	114, 227, 474, 477, 558, 792, 1072, 1914, 2789
BlpI	GCTNAGC	1 cut(s)	2352
BlsI	GCNGC	9 cut(s)	115, 228, 475, 478, 559, 793, 1073, 1915, 2790
BmcAI	AGTACT	2 cut(s)	1248, 2556
Bme1390I	CCNGG	7 cut(s)	327, 1320, 1402, 1631, 1632, 2201, 2432
Bme18I	GGWCC	5 cut(s)	203, 457, 908, 1091, 2362
BmeRI	GACNNNNNGTC	1 cut(s)	1597
BmeT110I	CYCGRG	3 cut(s)	350, 1278, 1630
BmgBI	CACGTC	1 cut(s)	1786
BmgT120I	GGNCC	9 cut(s)	203, 457, 527, 877, 908, 983, 1091, 2362, 2650
BmiI	GGNNCC	2 cut(s)	180, 369
BmrFI	CCNGG	7 cut(s)	327, 1320, 1402, 1631, 1632, 2201, 2432
BmrI	ACTGGG	1 cut(s)	1319
BmsI	GCATC	3 cut(s)	1900, 1918, 2131
BmtI	GCTAGC	2 cut(s)	294, 633
BmuI	ACTGGG	1 cut(s)	1319
BpiI	GAAGAC	4 cut(s)	1839, 2154, 2703, 2747
BplI	GAGNNNNNCTC	2 cut(s)	1703, 1735
BpmI	CTGGAG	1 cut(s)	1920
Bpu10I	CCTNAGC	5 cut(s)	601, 881, 1508, 1905, 2136
Bpu1102I	GCTNAGC	1 cut(s)	2352
BpuEI	CTTGAG	1 cut(s)	1283
BpuMI	CCSGG	4 cut(s)	1402, 1631, 1632, 2432
BsaI	GGTCTC	2 cut(s)	1301, 2985
BsaWI	WCCGGW	1 cut(s)	1672
BsaXI	ACNNNNNCTCC	2 cut(s)	2278, 2308
Bsc4I	CCNNNNNNNGG	6 cut(s)	30, 886, 1006, 2137, 2303, 2437
Bse118I	RCCGGY	5 cut(s)	229, 281, 459, 1672, 2669
Bse1I	ACTGG	4 cut(s)	160, 975, 1314, 2707
Bse3DI	GCAATG	2 cut(s)	1660, 2174
BseBI	CCWGG	3 cut(s)	327, 1320, 2201
BseGI	GGATG	9 cut(s)	381, 751, 979, 999, 1042, 1915, 2077, 2146, 2832
BseLI	CCNNNNNNNGG	6 cut(s)	30, 886, 1006, 2137, 2303, 2437
BseMI	GCAATG	2 cut(s)	1660, 2174
BseMII	CTCAG	7 cut(s)	1493, 1499, 1896, 2034, 2136, 2343, 2594
BseNI	ACTGG	4 cut(s)	160, 975, 1314, 2707
BseRI	GAGGAG	4 cut(s)	602, 791, 2028, 2283
BseX3I	CGGCCG	5 cut(s)	391, 575, 1455, 1914, 1953
BseXI	GCAGC	5 cut(s)	100, 460, 463, 544, 2800
Bsh1236I	CGCG	4 cut(s)	184, 1354, 1518, 2426
Bsh1285I	CGRYCG	5 cut(s)	394, 578, 1458, 1917, 1956
BshNI	GGYRCC	1 cut(s)	367
BshTI	ACCGGT	1 cut(s)	1672
BsiEI	CGRYCG	5 cut(s)	394, 578, 1458, 1917, 1956
BsiHKAI	GWGCWC	2 cut(s)	384, 789
BsiHKCI	CYCGRG	3 cut(s)	350, 1278, 1630
BsiSI	CCGG	9 cut(s)	90, 230, 282, 460, 1402, 1631, 1673, 2432, 2670
BslFI	GGGAC	1 cut(s)	1384
BslI	CCNNNNNNNGG	6 cut(s)	30, 886, 1006, 2137, 2303, 2437
BsmAI	GTCTC	4 cut(s)	1275, 1301, 2513, 2985
BsmFI	GGGAC	1 cut(s)	1384
BsmI	GAATGC	2 cut(s)	1266, 2286
Bso31I	GGTCTC	2 cut(s)	1301, 2985
BsoBI	CYCGRG	3 cut(s)	350, 1278, 1630
Bsp1286I	GDGCHC	4 cut(s)	384, 789, 1952, 2432
Bsp143I	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
Bsp1720I	GCTNAGC	1 cut(s)	2352
Bsp19I	CCATGG	2 cut(s)	1220, 2052
BspCNI	CTCAG	7 cut(s)	1492, 1500, 1897, 2035, 2135, 2344, 2593
BspFNI	CGCG	4 cut(s)	184, 1354, 1518, 2426
BspLI	GGNNCC	2 cut(s)	180, 369
BspMI	ACCTGC	2 cut(s)	525, 2856
BspOI	GCTAGC	2 cut(s)	294, 633
BspPI	GGATC	2 cut(s)	1494, 1741
BspQI	GCTCTTC	3 cut(s)	1704, 1741, 2247
BspT107I	GGYRCC	1 cut(s)	367
BspTNI	GGTCTC	2 cut(s)	1301, 2985
BsrDI	GCAATG	2 cut(s)	1660, 2174
BsrFI	RCCGGY	5 cut(s)	229, 281, 459, 1672, 2669
BsrI	ACTGG	4 cut(s)	160, 975, 1314, 2707
BssAI	RCCGGY	5 cut(s)	229, 281, 459, 1672, 2669
BssMI	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
BssSI	CACGAG	1 cut(s)	2732
BssT1I	CCWWGG	7 cut(s)	904, 1220, 1256, 1704, 2052, 2229, 2463
Bst2BI	CACGAG	1 cut(s)	2732
Bst2UI	CCWGG	3 cut(s)	327, 1320, 2201
Bst4CI	ACNGT	6 cut(s)	757, 935, 1060, 1961, 1986, 2487
Bst6I	CTCTTC	8 cut(s)	181, 471, 1152, 1704, 1741, 2247, 2905, 2988
BstAPI	GCANNNNNTGC	2 cut(s)	1676, 2770
BstC8I	GCNNGC	6 cut(s)	231, 292, 631, 789, 1516, 2428
BstDSI	CCRYGG	3 cut(s)	371, 1220, 2052
BstENI	CCTNNNNNAGG	2 cut(s)	2135, 2301
BstF5I	GGATG	9 cut(s)	381, 751, 979, 999, 1042, 1915, 2077, 2146, 2832
BstFNI	CGCG	4 cut(s)	184, 1354, 1518, 2426
BstH2I	RGCGCY	1 cut(s)	1515
BstHHI	GCGC	4 cut(s)	1354, 1447, 1514, 2339
BstKTI	GATC	9 cut(s)	1080, 1502, 1528, 1736, 2026, 2323, 2380, 2719, 2938
BstMAI	GTCTC	4 cut(s)	1275, 1301, 2513, 2985
BstMBI	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
BstMCI	CGRYCG	5 cut(s)	394, 578, 1458, 1917, 1956
BstNI	CCWGG	3 cut(s)	327, 1320, 2201
BstNSI	RCATGY	2 cut(s)	734, 3001
BstSCI	CCNGG	7 cut(s)	325, 1318, 1400, 1629, 1630, 2199, 2430
BstUI	CGCG	4 cut(s)	184, 1354, 1518, 2426
BstV1I	GCAGC	5 cut(s)	100, 460, 463, 544, 2800
BstV2I	GAAGAC	4 cut(s)	1839, 2154, 2703, 2747
BstX2I	RGATCY	1 cut(s)	1499
BstXI	CCANNNNNNTGG	1 cut(s)	333
BstYI	RGATCY	1 cut(s)	1499
BstZI	CGGCCG	5 cut(s)	391, 575, 1455, 1914, 1953
BsuI	GTATCC	1 cut(s)	2301
BtgI	CCRYGG	3 cut(s)	371, 1220, 2052
BtrI	CACGTC	1 cut(s)	1786
BtsCI	GGATG	9 cut(s)	381, 751, 979, 999, 1042, 1915, 2077, 2146, 2832
BtsI	GCAGTG	1 cut(s)	1440
BtsIMutI	CAGTG	5 cut(s)	968, 1056, 1307, 1440, 1966
BveI	ACCTGC	2 cut(s)	525, 2856
Cac8I	GCNNGC	6 cut(s)	231, 292, 631, 789, 1516, 2428
CaiI	CAGNNNCTG	1 cut(s)	1442
CfoI	GCGC	4 cut(s)	1354, 1447, 1514, 2339
Cfr10I	RCCGGY	5 cut(s)	229, 281, 459, 1672, 2669
Cfr13I	GGNCC	9 cut(s)	203, 457, 527, 877, 908, 983, 1091, 2362, 2650
Cfr9I	CCCGGG	1 cut(s)	1630
CseI	GACGC	1 cut(s)	1343
Csp6I	GTAC	7 cut(s)	368, 936, 1247, 1305, 2159, 2204, 2555
CspAI	ACCGGT	1 cut(s)	1672
CspCI	CAANNNNNGTGG	2 cut(s)	1538, 1573
CviQI	GTAC	7 cut(s)	368, 936, 1247, 1305, 2159, 2204, 2555
DpnI	GATC	9 cut(s)	1079, 1501, 1527, 1735, 2025, 2322, 2379, 2718, 2937
DpnII	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
DriI	GACNNNNNGTC	1 cut(s)	1597
EagI	CGGCCG	5 cut(s)	391, 575, 1455, 1914, 1953
Eam1104I	CTCTTC	8 cut(s)	181, 471, 1152, 1704, 1741, 2247, 2905, 2988
Eam1105I	GACNNNNNGTC	1 cut(s)	1597
EarI	CTCTTC	8 cut(s)	181, 471, 1152, 1704, 1741, 2247, 2905, 2988
EciI	GGCGGA	1 cut(s)	300
EclXI	CGGCCG	5 cut(s)	391, 575, 1455, 1914, 1953
Eco130I	CCWWGG	7 cut(s)	904, 1220, 1256, 1704, 2052, 2229, 2463
Eco24I	GRGCYC	2 cut(s)	1952, 2432
Eco31I	GGTCTC	2 cut(s)	1301, 2985
Eco32I	GATATC	1 cut(s)	2917
Eco47I	GGWCC	5 cut(s)	203, 457, 908, 1091, 2362
Eco52I	CGGCCG	5 cut(s)	391, 575, 1455, 1914, 1953
Eco57I	CTGAAG	4 cut(s)	2322, 2381, 2823, 2942
Eco88I	CYCGRG	3 cut(s)	350, 1278, 1630
EcoNI	CCTNNNNNAGG	2 cut(s)	2135, 2301
EcoO109I	RGGNCCY	1 cut(s)	877
EcoRII	CCWGG	3 cut(s)	325, 1318, 2199
EcoRV	GATATC	1 cut(s)	2917
EcoT14I	CCWWGG	7 cut(s)	904, 1220, 1256, 1704, 2052, 2229, 2463
EcoT38I	GRGCYC	2 cut(s)	1952, 2432
ErhI	CCWWGG	7 cut(s)	904, 1220, 1256, 1704, 2052, 2229, 2463
FalI	AAGNNNNNCTT	2 cut(s)	1030, 1062
FaqI	GGGAC	1 cut(s)	1384
FauI	CCCGC	1 cut(s)	1523
FauNDI	CATATG	1 cut(s)	1169
FbaI	TGATCA	3 cut(s)	1525, 2023, 2320
FblI	GTMKAC	2 cut(s)	752, 2711
Fnu4HI	GCNGC	9 cut(s)	114, 227, 474, 477, 558, 792, 1072, 1914, 2789
FokI	GGATG	9 cut(s)	388, 758, 986, 1006, 1029, 1922, 2084, 2153, 2819
FriOI	GRGCYC	2 cut(s)	1952, 2432
Fsp4HI	GCNGC	9 cut(s)	114, 227, 474, 477, 558, 792, 1072, 1914, 2789
FspI	TGCGCA	1 cut(s)	1446
GlaI	GCGC	4 cut(s)	1353, 1446, 1513, 2338
GluI	GCNGC	9 cut(s)	114, 227, 474, 477, 558, 792, 1072, 1914, 2789
GsuI	CTGGAG	1 cut(s)	1920
HaeII	RGCGCY	1 cut(s)	1515
HapII	CCGG	9 cut(s)	90, 230, 282, 460, 1402, 1631, 1673, 2432, 2670
HgaI	GACGC	1 cut(s)	1343
HhaI	GCGC	4 cut(s)	1354, 1447, 1514, 2339
Hin6I	GCGC	4 cut(s)	1352, 1445, 1512, 2337
HinP1I	GCGC	4 cut(s)	1352, 1445, 1512, 2337
HincII	GTYRAC	4 cut(s)	753, 1563, 1602, 2128
HindII	GTYRAC	4 cut(s)	753, 1563, 1602, 2128
HindIII	AAGCTT	3 cut(s)	1551, 2444, 2589
HpaII	CCGG	9 cut(s)	90, 230, 282, 460, 1402, 1631, 1673, 2432, 2670
HphI	GGTGA	7 cut(s)	1633, 1770, 1862, 2093, 2387, 2524, 2684
Hpy99I	CGWCG	1 cut(s)	757
HpyAV	CCTTC	9 cut(s)	620, 624, 1200, 1396, 1759, 1958, 2297, 2545, 2754
HpyCH4III	ACNGT	6 cut(s)	757, 935, 1060, 1961, 1986, 2487
HpyCH4IV	ACGT	1 cut(s)	1785
HpyCH4V	TGCA	9 cut(s)	195, 560, 734, 816, 831, 1012, 1100, 1202, 2947
HpySE526I	ACGT	1 cut(s)	1785
HspAI	GCGC	4 cut(s)	1352, 1445, 1512, 2337
KpnI	GGTACC	1 cut(s)	371
KroI	GCCGGC	1 cut(s)	229
KroNI	GCCGGC	1 cut(s)	231
Ksp22I	TGATCA	3 cut(s)	1525, 2023, 2320
Kzo9I	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
LguI	GCTCTTC	3 cut(s)	1704, 1741, 2247
LmnI	GCTCC	4 cut(s)	287, 379, 1263, 1901
Lsp1109I	GCAGC	5 cut(s)	100, 460, 463, 544, 2800
LweI	GCATC	3 cut(s)	1900, 1918, 2131
MaeII	ACGT	1 cut(s)	1785
MaeIII	GTNAC	6 cut(s)	952, 1459, 1776, 1801, 2391, 2512
MalI	GATC	9 cut(s)	1079, 1501, 1527, 1735, 2025, 2322, 2379, 2718, 2937
MboI	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
MfeI	CAATTG	3 cut(s)	62, 83, 735
MflI	RGATCY	1 cut(s)	1499
MhlI	GDGCHC	4 cut(s)	384, 789, 1952, 2432
MlsI	TGGCCA	3 cut(s)	1151, 2724, 2828
MluCI	AATT	7 cut(s)	62, 83, 313, 706, 735, 1489, 1839
MluNI	TGGCCA	3 cut(s)	1151, 2724, 2828
MlyI	GAGTC	2 cut(s)	544, 1471
MmeI	TCCRAC	5 cut(s)	284, 563, 958, 1527, 1565
Mox20I	TGGCCA	3 cut(s)	1151, 2724, 2828
MroNI	GCCGGC	1 cut(s)	229
MroXI	GAANNNNTTC	3 cut(s)	2221, 2700, 2973
MscI	TGGCCA	3 cut(s)	1151, 2724, 2828
MseI	TTAA	5 cut(s)	429, 705, 1205, 2097, 2181
MslI	CAYNNNNRTG	3 cut(s)	352, 431, 1423
Msp20I	TGGCCA	3 cut(s)	1151, 2724, 2828
MspI	CCGG	9 cut(s)	90, 230, 282, 460, 1402, 1631, 1673, 2432, 2670
MspR9I	CCNGG	7 cut(s)	327, 1320, 1402, 1631, 1632, 2201, 2432
MunI	CAATTG	3 cut(s)	62, 83, 735
Mva1269I	GAATGC	2 cut(s)	1266, 2286
MvaI	CCWGG	3 cut(s)	327, 1320, 2201
MvnI	CGCG	4 cut(s)	184, 1354, 1518, 2426
NaeI	GCCGGC	1 cut(s)	231
NciI	CCSGG	4 cut(s)	1402, 1631, 1632, 2432
NcoI	CCATGG	2 cut(s)	1220, 2052
NdeI	CATATG	1 cut(s)	1169
NdeII	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
NgoMIV	GCCGGC	1 cut(s)	229
NheI	GCTAGC	2 cut(s)	290, 629
NlaIV	GGNNCC	2 cut(s)	180, 369
NmeAIII	GCCGAG	4 cut(s)	766, 1205, 1931, 2192
NmuCI	GTSAC	4 cut(s)	952, 1459, 1776, 1801
NsbI	TGCGCA	1 cut(s)	1446
NspI	RCATGY	2 cut(s)	734, 3001
OliI	CACNNNNGTG	1 cut(s)	352
PaeR7I	CTCGAG	1 cut(s)	1278
PciI	ACATGT	1 cut(s)	2997
PciSI	GCTCTTC	3 cut(s)	1704, 1741, 2247
PcsI	WCGNNNNNNNCGW	3 cut(s)	1030, 2212, 2894
PctI	GAATGC	2 cut(s)	1266, 2286
PdiI	GCCGGC	1 cut(s)	231
PdmI	GAANNNNTTC	3 cut(s)	2221, 2700, 2973
PfeI	GAWTC	9 cut(s)	93, 244, 1052, 1063, 1405, 1626, 1807, 2210, 2474
PflFI	GACNNNGTC	1 cut(s)	1038
PfoI	TCCNGGA	1 cut(s)	1400
PinAI	ACCGGT	1 cut(s)	1672
PkrI	GCNGC	9 cut(s)	115, 228, 475, 478, 559, 793, 1073, 1915, 2790
PleI	GAGTC	2 cut(s)	543, 1471
PpsI	GAGTC	2 cut(s)	543, 1471
PscI	ACATGT	1 cut(s)	2997
Psp6I	CCWGG	3 cut(s)	325, 1318, 2199
PspGI	CCWGG	3 cut(s)	325, 1318, 2199
PspN4I	GGNNCC	2 cut(s)	180, 369
PspPI	GGNCC	9 cut(s)	203, 457, 527, 877, 908, 983, 1091, 2362, 2650
PstNI	CAGNNNCTG	1 cut(s)	1442
PsuI	RGATCY	1 cut(s)	1499
PsyI	GACNNNGTC	1 cut(s)	1038
RsaI	GTAC	7 cut(s)	369, 937, 1248, 1306, 2160, 2205, 2556
RsaNI	GTAC	7 cut(s)	368, 936, 1247, 1305, 2159, 2204, 2555
RseI	CAYNNNNRTG	3 cut(s)	352, 431, 1423
SalI	GTCGAC	1 cut(s)	751
SapI	GCTCTTC	3 cut(s)	1704, 1741, 2247
SaqAI	TTAA	5 cut(s)	429, 705, 1205, 2097, 2181
SatI	GCNGC	9 cut(s)	114, 227, 474, 477, 558, 792, 1072, 1914, 2789
Sau3AI	GATC	9 cut(s)	1077, 1499, 1525, 1733, 2023, 2320, 2377, 2716, 2935
Sau96I	GGNCC	9 cut(s)	203, 457, 527, 877, 908, 983, 1091, 2362, 2650
ScaI	AGTACT	2 cut(s)	1248, 2556
SchI	GAGTC	2 cut(s)	544, 1471
ScrFI	CCNGG	7 cut(s)	327, 1320, 1402, 1631, 1632, 2201, 2432
SduI	GDGCHC	4 cut(s)	384, 789, 1952, 2432
SfaNI	GCATC	3 cut(s)	1900, 1918, 2131
Sfr274I	CTCGAG	1 cut(s)	1278
SinI	GGWCC	5 cut(s)	203, 457, 908, 1091, 2362
SlaI	CTCGAG	1 cut(s)	1278
SmaI	CCCGGG	1 cut(s)	1632
SmiMI	CAYNNNNRTG	3 cut(s)	352, 431, 1423
SmlI	CTYRAG	2 cut(s)	1278, 1298
SmoI	CTYRAG	2 cut(s)	1278, 1298
SpeI	ACTAGT	2 cut(s)	1922, 2522
Sse9I	AATT	7 cut(s)	62, 83, 313, 706, 735, 1489, 1839
SspI	AATATT	1 cut(s)	564
StyD4I	CCNGG	7 cut(s)	325, 1318, 1400, 1629, 1630, 2199, 2430
StyI	CCWWGG	7 cut(s)	904, 1220, 1256, 1704, 2052, 2229, 2463
TaaI	ACNGT	6 cut(s)	757, 935, 1060, 1961, 1986, 2487
TaiI	ACGT	1 cut(s)	1788
TaqII	GACCGA	4 cut(s)	1789, 2467, 2878, 2967
TasI	AATT	7 cut(s)	62, 83, 313, 706, 735, 1489, 1839
TatI	WGTACW	3 cut(s)	1246, 2158, 2554
TauI	GCSGC	4 cut(s)	229, 794, 1074, 1916
TfiI	GAWTC	9 cut(s)	93, 244, 1052, 1063, 1405, 1626, 1807, 2210, 2474
Tru1I	TTAA	5 cut(s)	429, 705, 1205, 2097, 2181
Tru9I	TTAA	5 cut(s)	429, 705, 1205, 2097, 2181
TscAI	CASTG	5 cut(s)	975, 1063, 1314, 1447, 1966
TseFI	GTSAC	4 cut(s)	952, 1459, 1776, 1801
TseI	GCWGC	5 cut(s)	113, 473, 476, 557, 2788
Tsp45I	GTSAC	4 cut(s)	952, 1459, 1776, 1801
TspGWI	ACGGA	1 cut(s)	388
TspMI	CCCGGG	1 cut(s)	1630
TspRI	CASTG	5 cut(s)	975, 1063, 1314, 1447, 1966
Tth111I	GACNNNGTC	1 cut(s)	1038
VpaK11BI	GGWCC	5 cut(s)	203, 457, 908, 1091, 2362
XagI	CCTNNNNNAGG	2 cut(s)	2135, 2301
XapI	RAATTY	1 cut(s)	313
XbaI	TCTAGA	2 cut(s)	247, 2644
XceI	RCATGY	2 cut(s)	734, 3001
XhoI	CTCGAG	1 cut(s)	1278
XmaI	CCCGGG	1 cut(s)	1630
XmiI	GTMKAC	2 cut(s)	752, 2711
XmnI	GAANNNNTTC	3 cut(s)	2221, 2700, 2973
ZrmI	AGTACT	2 cut(s)	1248, 2556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.